IVF0025203.1 (mRNA) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAAAACAATTAAAAAGAGAGTTAAAAAGGGGGTTTAGGGTTTGTCTTCTCCTACGCCTCCTGGATTTTCCCCCCTCTCCTCTTCGAATTCGTAAGATTGAAGGTTTATGATCTTTCAATTATTCATTTATTCAAGTTCATGCCTTGTGCCAGTTTGATTTTGGATTGATGTTGGGAGGGATTGATATTGGTTGAGAGTTTCCACTTATGTTTTGTTTGTGGCTTAACAGTAAATGATTTGATTCTCCTTTCTCCACCGACGTGTGTAAACAGAAAAATTTGTACTGTGGCAGGCTAGTTAAGTGGAAGATAGTGGTGTATTGAACGAGAAATGCCTCATTCACTCGAGGGATTTATATTTGTACTTTTTCACGTTCTCGTCATCATTATGAAATGGCCGATTTTCTGCCTGAGTAGTATGTGAGCATTACATAAACTCTCTCACTCTCTTACTTGCATATTCAAACATCCATGTCATTTCATTTTAGTTATTGTATTGGCTTGAATGTGACTTTCTAGGGTCGAGAGTAAAATTTTAAATGTTGGGGAGGAGCTATGGAGGGAAACATTACCATTACAGATGGGTTCTCGCTTGTATCGTCTTCAAGGACTCAAACCTGATACGTGGTATGAAGTGAAGATATCATACCCGGGATCTGTATGTGTTTTCTGTCCTTCGAAAGTTGAATTTTTTAAGCTCTTCTGAGTTTGTCTCATTCAAAGGAAACAACAGATACCTGCTAGCTTCTCGTTAGAACTAAAGAGAGACTTGACAAGCCCTGTTGAGAAGCAGAGCAGAAAGTTACTTGATACTGAGAAGCTTATTTTCAAGACAGAGGGCATGAAGTTGCAGGGAGATCAGGTTGTCTTTTCCCCTTAGTATTTTAGGGAAATGATTATAGACTTTAATTGATGAAATTGTTAAACTTTCGAACTTACAGTTCTGATACAGGTTGATGCGCATGTGTTGGTAACTGTGAAATCCGAGGGAGTTGTTGCCATACCATCTGTACGGGAAAGGGAGTCGATCGTCTTCAATATAGGTATCTCATGTTTTTTCCCCACGTCATGTGGCATGGTTTCACAGACGTTCTGGCTTCAATTCATTTTTATCCCAACTGACTTGTTTTTTGGATAAGAAATCATTTCATTGACAAATAAAATATCCAAAGAATACAATAGAGATAACAGGAAAAAACCCAAATAAAGGATGAAACATCTGATTGGCCCCAACAATAGAAGATCACAATGAAATTAGAGGGGAAGGGGATGAAAAAAGGTTTTAGAAACAAAATGTAAAATGTATTGTAATGTGAGAAAGCCACAAAAATGAGCAGTCCAAACAAAACATCAGCGCGGTCCCTGACTTGTTAAATAATTGCAATCTTTGTTCCCTTATTCTATTTGTTCCATTTTTAAATTATAAGGCATGCATGGGGAGGATGAAAACTTTTGACCAACTAAAAGTTTCTAGTCGAATTATCTTTGCTGGTTTACAGTTCAAATGGGCTTATAATCTCATTTATTGGAATAGCTAGTAATGATTCTAATTTAAAAAAAAAAAAGGTATGATGAATTATCCTGGCACTAGATTGGAAAGAATAACTTAAATTATGCAAATGAAAAGAAAAATAAATTTATTCCATACATGATTTAAGAAGCAAACATTTATTTCTCATTACTTGATCAGCAAATATCTAATTTCCTGACTCCTGAAGAGAGCTCCTGGTTAAACAAGCTTGAGAAAAAGAAGTCTAGTTATTTTTACCTAGGTAACACATGTACTAAAACGAACAGCAGAAGACATACAATTCCATTTGTTTCTACCCTTGTTTATGAAGGAGTATATCGCTATGTCATGCTAACGACAGGGGTGTGTACTTAAATGTTGTTTCACTGTTGACGTTGAAACCGGTTACATTTTGCTTGCTGGACAACAATGTCTAAATCTCATTCAAAAGTATGATACTTTCTGGCTTTGTGGCAGTTTGTGACGAACTACTTATTGGCATCCCACACAAAGCTTGGGGGGTTGGAGGCTTGGTTATATTCTGCTTGATATTGGCATTCATCATCCCATCTCTTTTACCGCCATGGCTGTTACAGACCAACCAGACCCAAGGGCCAGGAAATCATCACGCATCCAAGAATTCTTAAATTGGTTAGTCTATCTAAGATCTTGTGCAACAGCTCGAAGGCTGTAAGGATGGAGAAGTTATTGTAGAGTGTTAAGCTGTCTGCTGCTCGAACTAACTGCCTTTTATCTCACACGGATTTCTTTATAATGGACCTTGAGAAGGAAAACATGTAAGCTTCTGGTCCATTATCAAGATTTTGGTTCTCCTTTGTTCATTTGTCCATAAAGCACTTTACTACTTCTGTTGATCATTTTTGTTTTGTTGAG GAAAACAATTAAAAAGAGAGTTAAAAAGGGGGTTTAGGGTTTGTCTTCTCCTACGCCTCCTGGATTTTCCCCCCTCTCCTCTTCGAATTCGTAAGATTGAAGGTTTATGATCTTTCAATTATTCATTTATTCAAGTTCATGCCTTGTGCCAGTTTGATTTTGGATTGATGTTGGGAGGGATTGATATTGGTTGAGAGTTTCCACTTATGTTTTGTTTGTGGCTTAACAGTAAATGATTTGATTCTCCTTTCTCCACCGACGTGTGTAAACAGAAAAATTTGTACTGTGGCAGGCTAGTTAAGTGGAAGATAGTGGTGTATTGAACGAGAAATGCCTCATTCACTCGAGGGATTTATATTTGTACTTTTTCACGTTCTCGTCATCATTATGAAATGGCCGATTTTCTGCCTGAGTAGTATGGTCGAGAGTAAAATTTTAAATGTTGGGGAGGAGCTATGGAGGGAAACATTACCATTACAGATGGGTTCTCGCTTGTATCGTCTTCAAGGACTCAAACCTGATACGTGGAAACAACAGATACCTGCTAGCTTCTCGTTAGAACTAAAGAGAGACTTGACAAGCCCTGTTGAGAAGCAGAGCAGAAAGTTACTTGATACTGAGAAGCTTATTTTCAAGACAGAGGGCATGAAGTTGCAGGGAGATCAGGTTGATGCGCATGTGTTGGTAACTGTGAAATCCGAGGGAGTTGTTGCCATACCATCTGTACGGGAAAGGGAGTCGATCGTCTTCAATATAGGTATCTCATGTTTTTTCCCCACGTCATGTGGCATGGTTTCACAGACGTTCTGGCTTCAATTCATTTTTATCCCAACTGACTTGTTTTTTGGATAAGAAATCATTTCATTGACAAATAAAATATCCAAAGAATACAATAGAGATAACAGGAAAAAACCCAAATAAAGGATGAAACATCTGATTGGCCCCAACAATAGAAGATCACAATGAAATTAGAGGGGAAGGGGATGAAAAAAGGTTTTAGAAACAAAATGTAAAATGTATTGTAATGTGAGAAAGCCACAAAAATGAGCAGTCCAAACAAAACATCAGCGCGGTCCCTGACTTGTTAAATAATTGCAATCTTTGTTCCCTTATTCTATTTGTTCCATTTTTAAATTATAAGGCATGCATGGGGAGGATGAAAACTTTTGACCAACTAAAAGTTTCTAGTCGAATTATCTTTGCTGGTTTACAGTTCAAATGGGCTTATAATCTCATTTATTGGAATAGCTAGTAATGATTCTAATTTAAAAAAAAAAAAGGTATGATGAATTATCCTGGCACTAGATTGGAAAGAATAACTTAAATTATGCAAATGAAAAGAAAAATAAATTTATTCCATACATGATTTAAGAAGCAAACATTTATTTCTCATTACTTGATCAGCAAATATCTAATTTCCTGACTCCTGAAGAGAGCTCCTGGTTAAACAAGCTTGAGAAAAAGAAGTCTAGTTATTTTTACCTAGGTAACACATGTACTAAAACGAACAGCAGAAGACATACAATTCCATTTGTTTCTACCCTTGTTTATGAAGGAGTATATCGCTATGTCATGCTAACGACAGGGGTGTGTACTTAAATGTTGTTTCACTGTTGACGTTGAAACCGGTTACATTTTGCTTGCTGGACAACAATGTCTAAATCTCATTCAAAAGTATGATACTTTCTGGCTTTGTGGCAGTTTGTGACGAACTACTTATTGGCATCCCACACAAAGCTTGGGGGGTTGGAGGCTTGGTTATATTCTGCTTGATATTGGCATTCATCATCCCATCTCTTTTACCGCCATGGCTGTTACAGACCAACCAGACCCAAGGGCCAGGAAATCATCACGCATCCAAGAATTCTTAAATTGGTTAGTCTATCTAAGATCTTGTGCAACAGCTCGAAGGCTGTAAGGATGGAGAAGTTATTGTAGAGTGTTAAGCTGTCTGCTGCTCGAACTAACTGCCTTTTATCTCACACGGATTTCTTTATAATGGACCTTGAGAAGGAAAACATGTAAGCTTCTGGTCCATTATCAAGATTTTGGTTCTCCTTTGTTCATTTGTCCATAAAGCACTTTACTACTTCTGTTGATCATTTTTGTTTTGTTGAG ATGCCTCATTCACTCGAGGGATTTATATTTGTACTTTTTCACGTTCTCGTCATCATTATGAAATGGCCGATTTTCTGCCTGAGTAGTATGGTCGAGAGTAAAATTTTAAATGTTGGGGAGGAGCTATGGAGGGAAACATTACCATTACAGATGGGTTCTCGCTTGTATCGTCTTCAAGGACTCAAACCTGATACGTGGAAACAACAGATACCTGCTAGCTTCTCGTTAGAACTAAAGAGAGACTTGACAAGCCCTGTTGAGAAGCAGAGCAGAAAGTTACTTGATACTGAGAAGCTTATTTTCAAGACAGAGGGCATGAAGTTGCAGGGAGATCAGGTTGATGCGCATGTGTTGGTAACTGTGAAATCCGAGGGAGTTGTTGCCATACCATCTGTACGGGAAAGGGAGTCGATCGTCTTCAATATAGGTATCTCATGTTTTTTCCCCACGTCATGTGGCATGGTTTCACAGACGTTCTGGCTTCAATTCATTTTTATCCCAACTGACTTGTTTTTTGGATAA MPHSLEGFIFVLFHVLVIIMKWPIFCLSSMVESKILNVGEELWRETLPLQMGSRLYRLQGLKPDTWKQQIPASFSLELKRDLTSPVEKQSRKLLDTEKLIFKTEGMKLQGDQVDAHVLVTVKSEGVVAIPSVRERESIVFNIGISCFFPTSCGMVSQTFWLQFIFIPTDLFFG Homology
BLAST of IVF0025203.1 vs. ExPASy TrEMBL
Match: A0A1S3CQF3 (uncharacterized protein LOC103503615 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103503615 PE=4 SV=1) HSP 1 Score: 277.7 bits (709), Expect = 3.3e-71 Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0
BLAST of IVF0025203.1 vs. ExPASy TrEMBL
Match: A0A1S3CRU2 (uncharacterized protein LOC103503615 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103503615 PE=4 SV=1) HSP 1 Score: 265.0 bits (676), Expect = 2.2e-67 Identity = 139/149 (93.29%), Postives = 140/149 (93.96%), Query Frame = 0
BLAST of IVF0025203.1 vs. ExPASy TrEMBL
Match: A0A0A0LEU4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G895050 PE=4 SV=1) HSP 1 Score: 251.5 bits (641), Expect = 2.5e-63 Identity = 132/149 (88.59%), Postives = 135/149 (90.60%), Query Frame = 0
BLAST of IVF0025203.1 vs. ExPASy TrEMBL
Match: A0A5D3E5W6 (Putative transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G005150 PE=4 SV=1) HSP 1 Score: 230.3 bits (586), Expect = 6.0e-57 Identity = 120/130 (92.31%), Postives = 121/130 (93.08%), Query Frame = 0
BLAST of IVF0025203.1 vs. ExPASy TrEMBL
Match: A0A6J1IJY5 (uncharacterized protein LOC111475555 OS=Cucurbita maxima OX=3661 GN=LOC111475555 PE=4 SV=1) HSP 1 Score: 228.8 bits (582), Expect = 1.7e-56 Identity = 119/149 (79.87%), Postives = 129/149 (86.58%), Query Frame = 0
BLAST of IVF0025203.1 vs. NCBI nr
Match: XP_008466088.1 (PREDICTED: uncharacterized protein LOC103503615 isoform X2 [Cucumis melo]) HSP 1 Score: 276 bits (705), Expect = 6.83e-92 Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0
BLAST of IVF0025203.1 vs. NCBI nr
Match: XP_008466085.1 (PREDICTED: uncharacterized protein LOC103503615 isoform X1 [Cucumis melo] >XP_008466086.1 PREDICTED: uncharacterized protein LOC103503615 isoform X1 [Cucumis melo] >XP_008466087.1 PREDICTED: uncharacterized protein LOC103503615 isoform X1 [Cucumis melo]) HSP 1 Score: 263 bits (672), Expect = 9.16e-87 Identity = 139/149 (93.29%), Postives = 140/149 (93.96%), Query Frame = 0
BLAST of IVF0025203.1 vs. NCBI nr
Match: XP_011652612.1 (uncharacterized protein LOC101222383 isoform X1 [Cucumis sativus] >KGN60308.1 hypothetical protein Csa_002653 [Cucumis sativus]) HSP 1 Score: 249 bits (637), Expect = 1.94e-81 Identity = 132/149 (88.59%), Postives = 135/149 (90.60%), Query Frame = 0
BLAST of IVF0025203.1 vs. NCBI nr
Match: XP_038892686.1 (uncharacterized protein LOC120081684 isoform X1 [Benincasa hispida] >XP_038892687.1 uncharacterized protein LOC120081684 isoform X1 [Benincasa hispida] >XP_038892688.1 uncharacterized protein LOC120081684 isoform X1 [Benincasa hispida] >XP_038892689.1 uncharacterized protein LOC120081684 isoform X1 [Benincasa hispida]) HSP 1 Score: 234 bits (597), Expect = 2.36e-75 Identity = 122/149 (81.88%), Postives = 131/149 (87.92%), Query Frame = 0
BLAST of IVF0025203.1 vs. NCBI nr
Match: TYK31229.1 (putative transmembrane protein [Cucumis melo var. makuwa]) HSP 1 Score: 229 bits (584), Expect = 1.19e-73 Identity = 120/130 (92.31%), Postives = 121/130 (93.08%), Query Frame = 0
BLAST of IVF0025203.1 vs. TAIR 10
Match: AT1G76480.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G20890.1). ) HSP 1 Score: 113.6 bits (283), Expect = 1.6e-25 Identity = 64/141 (45.39%), Postives = 95/141 (67.38%), Query Frame = 0
BLAST of IVF0025203.1 vs. TAIR 10
Match: AT1G20890.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G76480.2); Has 33 Blast hits to 33 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 104.4 bits (259), Expect = 9.5e-23 Identity = 62/141 (43.97%), Postives = 91/141 (64.54%), Query Frame = 0
BLAST of IVF0025203.1 vs. TAIR 10
Match: AT1G76480.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G20890.1); Has 31 Blast hits to 31 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 62.8 bits (151), Expect = 3.2e-10 Identity = 35/74 (47.30%), Postives = 52/74 (70.27%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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