IVF0022147.2 (mRNA) Melon (IVF77) v1

Overview


Name	IVF0022147.2
Type	mRNA
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Retrotrans_gag domain-containing protein
Location	chr01: 8340883 .. 8344733 (+)
Sequence length	3297
RNA-Seq Expression	IVF0022147.2
Synteny	IVF0022147.2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGAGCAAACCAATGATCAGGTTCAAGCAGTTCGTCAAGACGTTGAAGGTCTGAAGGATCAATTGGCAAAAATCCTAGAATTGCTCACCACCGGAAGAGGAAAGAGTGTTGCGGGGACTTCATCACAAGTGGAAGTGGATCTAAATCAGGTACTGGAGGACATGCCTGCATATCCTCCGGGTTTCACTCCTCAAAGGTCATCTAGTCCACGCATGGGGGATAGGACGTATCCTACATCATTTCCCGCGCCAAATCCTAACACAACCACCCAACAAGCAGCCCATGCGAACAATCCTATATCAACTCTAATTATGGAAGGTGGTAAGAAAATTTCAGAAGAGCAGGGTAGTAGGAGAAGACTGGAATTTCTAGAAGAAAGACTGCGCGTCATTGAAGGTGCAGACATGTACGGGAGTATCGACGCAACACAACTATGTTTGATATCAGATGTGGTGATCCCTCCCAAATTCAAGACTCCAGATTTTGAGAAATACAATGGAACCATGTCCAAAAAACACCTAGTTATGTACTGTCGGAAAATGTCGGCTTATGCTCATGATGATAAATTGTTGATTCATTGCTTCCAAGACAGCTTAGTCGGCCCGGCTTCTCGTTGGTACATGCAATTGGATGGTTCACAAGTGCATAGGTGGAAGGATCTTGCTGATTCTTTTTTAAAACAATATAAGTACAACATTGATATGGCGCCGATCGTCTAGACCTTCAGAGAATGGAAAAAAAGAATGTTGAAACTTTTAAGGAATATGCACAGCGATGGAGAGAGTTAGCTGCACAAGTGCAACCTCCCCTGACCGACAAAGAATTGACAGCTATGTTCATAAACACTCTTCGGGCCCCATACTATGATAGAATGGTTGGAAGTGCTTCAACTAATTTCTCGGACGTCATAACCATTGGGGAGAGGATTGAATTTGGAGTGAAGAATGGAAGGATCTCTGATCCCGCTTCAGAAACAAGAAGAGTGATGACCCCAAAGAAAAAAGAAGGAGAAGTACACGAGTTGAGTTCGACTCAAAGAGTAGCAACACGTGTATCCTCACCAATTGTGGGGCAGACAAATTTCTCTCCTAGTTATCAGAATGGAGGTCAAAGCCCATTTGGTCAGTCAACTCAGAGGAATATAAGGAACAATTGGAAGCAAACCCGTTTTGATCCTATACCTATGTCATACACGGAACTTTTGCCTCAACTTATAAAGAGTCATCAAGTGGCTATTGTACCACAAGAGCCTCTGCAACCACCATATCCTAAGTGGTATGACCCCAACGCAAAGTGTGAATACCATGCTGGGGCAGTTGGGCATTCTACGGAGAATTGTTTTCCTTTGAAAGCTAAAGTGCAAAGTCTAGTTAAAGCCGGTTGGTTAAGGTTCAAGAAGACAGGGGAAGAGCCTGATGTCAACCAGAACCCTTTACCAAATCATGAGGGTCCCTCCATAAATGCAGTTGACACGTTCATGCAAAGACATAAGAATAAGGTGAGCGACGTAGCTACTTCAATGAAAACGCTTTTCCAAATCCTCCATGGAGCTGGATATTTGTCACCAAGGTTTAACAATGATGATAGAGAGAAGATTGGATGCACCAACAATGAGCAGTGTTTATTCCATCCAGAGACAAATGACCATTCCATTGAGGACTGTTGTGAGTTCAAGAATGAGGTGCAAAAGCTGATGGACTCAAGATTCTCTTGATAGGACAGATGAGCATGCAGGAAATCGAGGTTAATATGATCACTAATGCTTCATCTAGTGAGAAAACTTCAAATGAGACGACATTTATGTGGAAACCATTAGTCATTCATTACGAAGAGAAGCCAAGTATTATGTCTTATATCCAAAAACCTAAAGCAATGACAGTTGAAATACCAGGTCCTTTTGCTTATAAGGATAACCATGCCGTTCCATGGAAATATGAATGTCAGTTCATCACGGACAATGTCGTTTCTGCAACAGTCGGAGGAATAACGCGTAGTGGAAGGTGTTATACACCAGATAATTTAAAAGATGTCACTAAGGAGGATGAAGTTCGACGACGTAAAGGAAAAGCTATAGAAATGGCAGGTGAAGATGATCTAAATGATCTGAGCAAGGTTTTTACTGAAAAGAACACATTAGTCGAGAAAGAGACAGATCATGAACTTGTCTCCAAAGAAGAAGCCTGTGAATTTTAAAGTTAATTAAGCAGAGTGAATATAAAGTGATTGAACAATTACATCGTACCCCAGCTCGTATATCGATGTTGTCATTATTCATGTACTCTGAACCGCATCGTAAGGTTTTGTTGGATATCTTAAATAGAGCCCATGTAGGACATGATGTTTCAGTGAATGCACTTAGTGAAATCGTGGAAAATATAACTGCTACAAATTGCATTTCCTTTACAGATGAAGAAATTCCCCCTGAAGGTACTGGACATACTAAGGCATTACACATATCTGTGAAGTGTAAGGACCATCACGTGGCGAGGGTTCTGGTAGATAATGGTTCATCTTTAAATATAATGTCGAGATCCACGTTGATGAAACTCCCCATAGATCCATCGTACCTAAGACCAAGTACTATGGTTGTAAGAGCCTTTGACGGTGCACGTAGAGAAGTAATCGGGGATATAGATATCCCATTAAAAATTGGGCCTTCCACTTTCAATGTTTCATTCCAAGTAATGGATATAAATTCCTCATACAGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTCTCTCTCACTCACTTGAATCATTATTTTCTTCTTGAAAAGATAAAAAGTCAAAACTTGCAAAATAGCTCAAGGTTCGCCTCCTCAGCATCCATATTGGACAAGAAGAAAGGCTCGAATAATGGATGAGCAAACCAATGATCAGGTTCAAGCAGTTCGTCAAGACGTTGAAGGTCTGAAGGATCAATTGGCAAAAATCCTAGAATTGCTCACCACCGGAAGAGGAAAGAGTGTTGCGGGACTTCATCACAAGTGGAAGTGGATCTGAATCAGGTACTGGAGGACATGCCTGCATATCCTCCGGTTTCACTCCTCAAAGGTCATCTAGTCCACGCATGGGGGATAGGACGTATCCTACATCATTTCCCGCGCCAAATCCTAACACAACCACCCAACAAGCAGCCCATGCGAACAATCCTATATCAACTCTAATTATGGAAGGTGGTAAGAAAATTTCAGAAGAGCAGGGTAGTAGGAGAAGACTGGAATTTCTAGAAGAAAGACTGCGCGTCATTGAAGGTGCAGACATGTACGGGAGTATCGACGCAACACAACTATGTTTGATATCAGATGTGGTGATCCCTCCCAAATTCAAGACTCCAGATTTTGAGAAATACAATGGAACCTCATGTCCAAAAAGCCACCTAGTTATGTACTGTCGGAAAATGTCGGCTTATGCTCATGATGATAAATTGTTGATTCATTGCTTCCAAGACAGCTTAGTCGGCCCGGCTTCTCGTTGGTACATGCAATTGGATGGTTCACAAGTGCATAGGTGGAAGGATCTTGCTGATTCTTTTTTAAAACAATATAAGTACAACATTGATATGGCGCCCGATCGTCTAGACCTTCAGAGAATGGAAAAAAAGAATGTTGAAACTTTTAAGGAATATGCACAGCGATGGAGAGAGTTAGCTGCACAAGTGCAACCTCCCCTGACCGACAAAGAATTGACAGCTATGTTCATAAACACTCTTCGGGCCCATACTATGATAGAATGGTTGGAAGTGCTTCAACTAATTTCTCGGACGTCATAA

mRNA sequence

ATGGATGAGCAAACCAATGATCAGGTTCAAGCAGTTCGTCAAGACGTTGAAGGTCTGAAGGATCAATTGGCAAAAATCCTAGAATTGCTCACCACCGGAAGAGGAAAGAGTGTTGCGGGGACTTCATCACAAGTGGAAGTGGATCTAAATCAGGTACTGGAGGACATGCCTGCATATCCTCCGGGTTTCACTCCTCAAAGGTCATCTAGTCCACGCATGGGGGATAGGACGTATCCTACATCATTTCCCGCGCCAAATCCTAACACAACCACCCAACAAGCAGCCCATGCGAACAATCCTATATCAACTCTAATTATGGAAGGTGGTAAGAAAATTTCAGAAGAGCAGGGTAGTAGGAGAAGACTGGAATTTCTAGAAGAAAGACTGCGCGTCATTGAAGGTGCAGACATGTACGGGAGTATCGACGCAACACAACTATGTTTGATATCAGATGTGGTGATCCCTCCCAAATTCAAGACTCCAGATTTTGAGAAATACAATGGAACCATGTCCAAAAAACACCTAGTTATGTACTGTCGGAAAATGTCGGCTTATGCTCATGATGATAAATTGTTGATTCATTGCTTCCAAGACAGCTTAGTCGGCCCGGCTTCTCGTTGGTACATGCAATTGGATGACCTTCAGAGAATGGAAAAAAAGAATGTTGAAACTTTTAAGGAATATGCACAGCGATGGAGAGAGTTAGCTGCACAAGTGCAACCTCCCCTGACCGACAAAGAATTGACAGCTATGTTCATAAACACTCTTCGGGCCCCATACTATGATAGAATGGTTGGAAGTGCTTCAACTAATTTCTCGGACGTCATAACCATTGGGGAGAGGATTGAATTTGGAGTGAAGAATGGAAGGATCTCTGATCCCGCTTCAGAAACAAGAAGAGTGATGACCCCAAAGAAAAAAGAAGGAGAAGTACACGAGTTGAGTTCGACTCAAAGAGTAGCAACACGTGTATCCTCACCAATTGTGGGGCAGACAAATTTCTCTCCTAGTTATCAGAATGGAGGTCAAAGCCCATTTGGTCAGTCAACTCAGAGGAATATAAGGAACAATTGGAAGCAAACCCGTTTTGATCCTATACCTATGTCATACACGGAACTTTTGCCTCAACTTATAAAGAGTCATCAAGTGGCTATTGTACCACAAGAGCCTCTGCAACCACCATATCCTAAGTGGTATGACCCCAACGCAAAGTGTGAATACCATGCTGGGGCAGTTGGGCATTCTACGGAGAATTGTTTTCCTTTGAAAGCTAAAGTGCAAAGTCTAGTTAAAGCCGGTTGGTTAAGGTTCAAGAAGACAGGGGAAGAGCCTGATGTCAACCAGAACCCTTTACCAAATCATGAGGGTCCCTCCATAAATGCAGTTGACACGTTCATGCAAAGACATAAGAATAAGGTGAGCGACGTAGCTACTTCAATGAAAACGCTTTTCCAAATCCTCCATGGAGCTGGATATTTGTCACCAAGGTTTAACAATGATGATAGAGAGAAGATTGGATGCACCAACAATGAGCAGTGTTTATTCCATCCAGAGACAAATGACCATTCCATTGAGGACTGTTGTGAGTTCAAGAATGAGATGAGCATGCAGGAAATCGAGGTTAATATGATCACTAATGCTTCATCTAGTGAGAAAACTTCAAATGAGACGACATTTATGTGGAAACCATTAGTCATTCATTACGAAGAGAAGCCAAGTATTATGTCTTATATCCAAAAACCTAAAGCAATGACAGTTGAAATACCAGGTCCTTTTGCTTATAAGGATAACCATGCCGTTCCATGGAAATATGAATGTCAGTTCATCACGGACAATGTCGTTTCTGCAACAGTCGGAGGAATAACGCGTAGTGGAAGGTGTTATACACCAGATAATTTAAAAGATGTCACTAAGGAGGATGAAGTTCGACGACGTAAAGGAAAAGCTATAGAAATGGCAGGTGAAGATGATCTAAATGATCTGAGCAAGAGTGAATATAAAGTGATTGAACAATTACATCGTACCCCAGCTCGTATATCGATGTTGTCATTATTCATGTACTCTGAACCGCATCGTAAGGTTTTGTTGGATATCTTAAATAGAGCCCATGTAGGACATGATGTTTCAGTGAATGCACTTAGTGAAATCGTGGAAAATATAACTGCTACAAATTGCATTTCCTTTACAGATGAAGAAATTCCCCCTGAAGGTACTGGACATACTAAGGCATTACACATATCTGTGAAGTGTAAGGACCATCACGTGGCGAGGGTTCTGGTAGATAATGGTTCATCTTTAAATATAATGTCGAGATCCACGTTGATGAAACTCCCCATAGATCCATCGTACCTAAGACCAAGTACTATGGTTGTAAGAGCCTTTGACGGTGCACGTAGAGAAGTAATCGGGGATATAGATATCCCATTAAAAATTGGGCCTTCCACTTTCAATGTTTCATTCCAAAATTGCTCACCACCGGAAGAGGAAAGAGTGTTGCGGGACTTCATCACAAGTGGAAGTGGATCTGAATCAGGTACTGGAGGACATGCCTGCATATCCTCCGGTTTCACTCCTCAAAGGTCATCTAGTCCACGCATGGGGGATAGGACGTATCCTACATCATTTCCCGCGCCAAATCCTAACACAACCACCCAACAAGCAGCCCATGCGAACAATCCTATATCAACTCTAATTATGGAAGGTGGTAAGAAAATTTCAGAAGAGCAGGGTAGTAGGAGAAGACTGGAATTTCTAGAAGAAAGACTGCGCGTCATTGAAGGTGCAGACATGTACGGGAGTATCGACGCAACACAACTATGTTTGATATCAGATGTGGTGATCCCTCCCAAATTCAAGACTCCAGATTTTGAGAAATACAATGGAACCTCATGTCCAAAAAGCCACCTAGTTATGTACTGTCGGAAAATGTCGGCTTATGCTCATGATGATAAATTGTTGATTCATTGCTTCCAAGACAGCTTAGTCGGCCCGGCTTCTCGTTGGTACATGCAATTGGATGGTTCACAAGTGCATAGGTGGAAGGATCTTGCTGATTCTTTTTTAAAACAATATAAGTACAACATTGATATGGCGCCCGATCGTCTAGACCTTCAGAGAATGGAAAAAAAGAATGTTGAAACTTTTAAGGAATATGCACAGCGATGGAGAGAGTTAGCTGCACAAGTGCAACCTCCCCTGACCGACAAAGAATTGACAGCTATGTTCATAAACACTCTTCGGGCCCATACTATGATAGAATGGTTGGAAGTGCTTCAACTAATTTCTCGGACGTCATAA

Coding sequence (CDS)

ATGGATGAGCAAACCAATGATCAGGTTCAAGCAGTTCGTCAAGACGTTGAAGGTCTGAAGGATCAATTGGCAAAAATCCTAGAATTGCTCACCACCGGAAGAGGAAAGAGTGTTGCGGGGACTTCATCACAAGTGGAAGTGGATCTAAATCAGGTACTGGAGGACATGCCTGCATATCCTCCGGGTTTCACTCCTCAAAGGTCATCTAGTCCACGCATGGGGGATAGGACGTATCCTACATCATTTCCCGCGCCAAATCCTAACACAACCACCCAACAAGCAGCCCATGCGAACAATCCTATATCAACTCTAATTATGGAAGGTGGTAAGAAAATTTCAGAAGAGCAGGGTAGTAGGAGAAGACTGGAATTTCTAGAAGAAAGACTGCGCGTCATTGAAGGTGCAGACATGTACGGGAGTATCGACGCAACACAACTATGTTTGATATCAGATGTGGTGATCCCTCCCAAATTCAAGACTCCAGATTTTGAGAAATACAATGGAACCATGTCCAAAAAACACCTAGTTATGTACTGTCGGAAAATGTCGGCTTATGCTCATGATGATAAATTGTTGATTCATTGCTTCCAAGACAGCTTAGTCGGCCCGGCTTCTCGTTGGTACATGCAATTGGATGACCTTCAGAGAATGGAAAAAAAGAATGTTGAAACTTTTAAGGAATATGCACAGCGATGGAGAGAGTTAGCTGCACAAGTGCAACCTCCCCTGACCGACAAAGAATTGACAGCTATGTTCATAAACACTCTTCGGGCCCCATACTATGATAGAATGGTTGGAAGTGCTTCAACTAATTTCTCGGACGTCATAACCATTGGGGAGAGGATTGAATTTGGAGTGAAGAATGGAAGGATCTCTGATCCCGCTTCAGAAACAAGAAGAGTGATGACCCCAAAGAAAAAAGAAGGAGAAGTACACGAGTTGAGTTCGACTCAAAGAGTAGCAACACGTGTATCCTCACCAATTGTGGGGCAGACAAATTTCTCTCCTAGTTATCAGAATGGAGGTCAAAGCCCATTTGGTCAGTCAACTCAGAGGAATATAAGGAACAATTGGAAGCAAACCCGTTTTGATCCTATACCTATGTCATACACGGAACTTTTGCCTCAACTTATAAAGAGTCATCAAGTGGCTATTGTACCACAAGAGCCTCTGCAACCACCATATCCTAAGTGGTATGACCCCAACGCAAAGTGTGAATACCATGCTGGGGCAGTTGGGCATTCTACGGAGAATTGTTTTCCTTTGAAAGCTAAAGTGCAAAGTCTAGTTAAAGCCGGTTGGTTAAGGTTCAAGAAGACAGGGGAAGAGCCTGATGTCAACCAGAACCCTTTACCAAATCATGAGGGTCCCTCCATAAATGCAGTTGACACGTTCATGCAAAGACATAAGAATAAGGTGAGCGACGTAGCTACTTCAATGAAAACGCTTTTCCAAATCCTCCATGGAGCTGGATATTTGTCACCAAGGTTTAACAATGATGATAGAGAGAAGATTGGATGCACCAACAATGAGCAGTGTTTATTCCATCCAGAGACAAATGACCATTCCATTGAGGACTGTTGTGAGTTCAAGAATGAGATGAGCATGCAGGAAATCGAGGTTAATATGATCACTAATGCTTCATCTAGTGAGAAAACTTCAAATGAGACGACATTTATGTGGAAACCATTAGTCATTCATTACGAAGAGAAGCCAAGTATTATGTCTTATATCCAAAAACCTAAAGCAATGACAGTTGAAATACCAGGTCCTTTTGCTTATAAGGATAACCATGCCGTTCCATGGAAATATGAATGTCAGTTCATCACGGACAATGTCGTTTCTGCAACAGTCGGAGGAATAACGCGTAGTGGAAGGTGTTATACACCAGATAATTTAAAAGATGTCACTAAGGAGGATGAAGTTCGACGACGTAAAGGAAAAGCTATAGAAATGGCAGGTGAAGATGATCTAAATGATCTGAGCAAGAGTGAATATAAAGTGATTGAACAATTACATCGTACCCCAGCTCGTATATCGATGTTGTCATTATTCATGTACTCTGAACCGCATCGTAAGGTTTTGTTGGATATCTTAAATAGAGCCCATGTAGGACATGATGTTTCAGTGAATGCACTTAGTGAAATCGTGGAAAATATAACTGCTACAAATTGCATTTCCTTTACAGATGAAGAAATTCCCCCTGAAGGTACTGGACATACTAAGGCATTACACATATCTGTGAAGTGTAAGGACCATCACGTGGCGAGGGTTCTGGTAGATAATGGTTCATCTTTAAATATAATGTCGAGATCCACGTTGATGAAACTCCCCATAGATCCATCGTACCTAAGACCAAGTACTATGGTTGTAAGAGCCTTTGACGGTGCACGTAGAGAAGTAATCGGGGATATAGATATCCCATTAAAAATTGGGCCTTCCACTTTCAATGTTTCATTCCAAAATTGCTCACCACCGGAAGAGGAAAGAGTGTTGCGGGACTTCATCACAAGTGGAAGTGGATCTGAATCAGGTACTGGAGGACATGCCTGCATATCCTCCGGTTTCACTCCTCAAAGGTCATCTAGTCCACGCATGGGGGATAGGACGTATCCTACATCATTTCCCGCGCCAAATCCTAACACAACCACCCAACAAGCAGCCCATGCGAACAATCCTATATCAACTCTAATTATGGAAGGTGGTAAGAAAATTTCAGAAGAGCAGGGTAGTAGGAGAAGACTGGAATTTCTAGAAGAAAGACTGCGCGTCATTGAAGGTGCAGACATGTACGGGAGTATCGACGCAACACAACTATGTTTGATATCAGATGTGGTGATCCCTCCCAAATTCAAGACTCCAGATTTTGAGAAATACAATGGAACCTCATGTCCAAAAAGCCACCTAGTTATGTACTGTCGGAAAATGTCGGCTTATGCTCATGATGATAAATTGTTGATTCATTGCTTCCAAGACAGCTTAGTCGGCCCGGCTTCTCGTTGGTACATGCAATTGGATGGTTCACAAGTGCATAGGTGGAAGGATCTTGCTGATTCTTTTTTAAAACAATATAAGTACAACATTGATATGGCGCCCGATCGTCTAGACCTTCAGAGAATGGAAAAAAAGAATGTTGAAACTTTTAAGGAATATGCACAGCGATGGAGAGAGTTAGCTGCACAAGTGCAACCTCCCCTGACCGACAAAGAATTGACAGCTATGTTCATAAACACTCTTCGGGCCCATACTATGATAGAATGGTTGGAAGTGCTTCAACTAATTTCTCGGACGTCATAA

Protein sequence

MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDMPAYPPGFTPQRSSSPRMGDRTYPTSFPAPNPNTTTQQAAHANNPISTLIMEGGKKISEEQGSRRRLEFLEERLRVIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTMSKKHLVMYCRKMSAYAHDDKLLIHCFQDSLVGPASRWYMQLDDLQRMEKKNVETFKEYAQRWRELAAQVQPPLTDKELTAMFINTLRAPYYDRMVGSASTNFSDVITIGERIEFGVKNGRISDPASETRRVMTPKKKEGEVHELSSTQRVATRVSSPIVGQTNFSPSYQNGGQSPFGQSTQRNIRNNWKQTRFDPIPMSYTELLPQLIKSHQVAIVPQEPLQPPYPKWYDPNAKCEYHAGAVGHSTENCFPLKAKVQSLVKAGWLRFKKTGEEPDVNQNPLPNHEGPSINAVDTFMQRHKNKVSDVATSMKTLFQILHGAGYLSPRFNNDDREKIGCTNNEQCLFHPETNDHSIEDCCEFKNEMSMQEIEVNMITNASSSEKTSNETTFMWKPLVIHYEEKPSIMSYIQKPKAMTVEIPGPFAYKDNHAVPWKYECQFITDNVVSATVGGITRSGRCYTPDNLKDVTKEDEVRRRKGKAIEMAGEDDLNDLSKSEYKVIEQLHRTPARISMLSLFMYSEPHRKVLLDILNRAHVGHDVSVNALSEIVENITATNCISFTDEEIPPEGTGHTKALHISVKCKDHHVARVLVDNGSSLNIMSRSTLMKLPIDPSYLRPSTMVVRAFDGARREVIGDIDIPLKIGPSTFNVSFQNCSPPEEERVLRDFITSGSGSESGTGGHACISSGFTPQRSSSPRMGDRTYPTSFPAPNPNTTTQQAAHANNPISTLIMEGGKKISEEQGSRRRLEFLEERLRVIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTSCPKSHLVMYCRKMSAYAHDDKLLIHCFQDSLVGPASRWYMQLDGSQVHRWKDLADSFLKQYKYNIDMAPDRLDLQRMEKKNVETFKEYAQRWRELAAQVQPPLTDKELTAMFINTLRAHTMIEWLEVLQLISRTS

Homology

[Close]

BLAST of IVF0022147.2 vs. ExPASy TrEMBL
Match: A0A5A7VAU5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1023G00060 PE=4 SV=1)

HSP 1 Score: 1589.7 bits (4115), Expect = 0.0e+00
Identity = 809/897 (90.19%), Postives = 812/897 (90.52%), Query Frame = 0


Query: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDMPAYP 60
           MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSV GTSSQVEVDLNQVLEDMP YP
Sbjct: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVVGTSSQVEVDLNQVLEDMPTYP 60

Query: 61  PGFTPQRSSSPRMGDRTYPTSFPAPNPNTTTQQAAHANNPISTLIMEGGKKISEEQGSRR 120
           PGFTPQRSSSPRMGDRTYPTSFPAPNPNTTTQQAAHANNPISTLIMEGGKKISEEQGSRR
Sbjct: 61  PGFTPQRSSSPRMGDRTYPTSFPAPNPNTTTQQAAHANNPISTLIMEGGKKISEEQGSRR 120

Query: 121 RLEFLEERLRVIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGT-MSKKHLVMYC 180
           RLEFLEERLRVIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGT   K HLVMYC
Sbjct: 121 RLEFLEERLRVIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTSCPKSHLVMYC 180

Query: 181 RKMSAYAHDDKLLIHCFQDSLVGPASRWYMQLD--------------------------- 240
           RKMSAYAHDDKLLIHCFQDSLVGPASRWYMQLD                           
Sbjct: 181 RKMSAYAHDDKLLIHCFQDSLVGPASRWYMQLDGSQVHRWKDLADSFLKQYKYNIDMAPD 240

Query: 241 --DLQRMEKKNVETFKEYAQRWRELAAQVQPPLTDKELTAMFINTLRAPYYDRMVGSAST 300
             DLQRMEKKNVETFKEYAQRWRELAAQVQPPLTDKELTAMFINTLRAPYYDRMVGSAST
Sbjct: 241 RLDLQRMEKKNVETFKEYAQRWRELAAQVQPPLTDKELTAMFINTLRAPYYDRMVGSAST 300

Query: 301 NFSDVITIGERIEFGVKNGRISDPASETRRVMTPKKKEGEVHELSSTQRVATRVSSPIVG 360
           NFSDVITIGERIEFGVKNGRISDPASETRRVMTPKKKEGEVHELSSTQRVATRVSSPIVG
Sbjct: 301 NFSDVITIGERIEFGVKNGRISDPASETRRVMTPKKKEGEVHELSSTQRVATRVSSPIVG 360

Query: 361 QTNFSPSYQNGGQSPFGQSTQRNIRNNWKQTRFDPIPMSYTELLPQLIKSHQVAIVPQEP 420
           QTNFSPSYQNGGQSPFGQSTQRNIRNNWKQTRFDPIPMSYTELLPQLIKSHQVAIVPQEP
Sbjct: 361 QTNFSPSYQNGGQSPFGQSTQRNIRNNWKQTRFDPIPMSYTELLPQLIKSHQVAIVPQEP 420

Query: 421 LQPPYPKWYDPNAKCEYHAGAVGHSTENCFPLKAKVQSLVKAGWLRFKKTGEEPDVNQNP 480
           LQPPYPKWYDPNAKCEYHAGAVGHSTENCFPLKAKVQSLVKAGWLRFKKTGEEPDVNQNP
Sbjct: 421 LQPPYPKWYDPNAKCEYHAGAVGHSTENCFPLKAKVQSLVKAGWLRFKKTGEEPDVNQNP 480

Query: 481 LPNHEGPSINAVDTFMQRHKNKVSDVATSMKTLFQILHGAGYLSPRFNNDDREKIGCTNN 540
           LPNHEGP INAVDTFMQRHKNKVSDVATSMKTLFQILHGAGYLSPRFNNDDREKIGCTNN
Sbjct: 481 LPNHEGPIINAVDTFMQRHKNKVSDVATSMKTLFQILHGAGYLSPRFNNDDREKIGCTNN 540

Query: 541 EQCLFHPETNDHSIEDCCEFKNE--------------MSMQEIEVNMITNASSSEKTSNE 600
           EQCLFHPETNDHSIEDCCEFKNE              MSMQEIEVNMITNASS+EKTSNE
Sbjct: 541 EQCLFHPETNDHSIEDCCEFKNEVQKLMDSKILLIGQMSMQEIEVNMITNASSNEKTSNE 600

Query: 601 TTFMWKPLVIHYEEKPSIMSYIQKPKAMTVEIPGPFAYKDNHAVPWKYECQFITDNVVSA 660
           TTFMWKPLVIHYEEKPSIMSYIQKPKAMTVEIPGPFAYKDNHAVPWKYECQFITDNVV A
Sbjct: 601 TTFMWKPLVIHYEEKPSIMSYIQKPKAMTVEIPGPFAYKDNHAVPWKYECQFITDNVVFA 660

Query: 661 TVGGITRSGRCYTPDNLKDVTKEDEVRRRKGKAIEMAGEDDLNDLSK------------- 720
           TV GITRSGRCYTPDNLKDV+KEDEVRRRKGKAIEMAGEDDLNDLSK             
Sbjct: 661 TVEGITRSGRCYTPDNLKDVSKEDEVRRRKGKAIEMAGEDDLNDLSKVFTEKNTLVEKET 720

Query: 721 -------------------SEYKVIEQLHRTPARISMLSLFMYSEPHRKVLLDILNRAHV 780
                              SEYKVIEQLHRTPARISMLSLF YSEPHRKVLLDILNRAHV
Sbjct: 721 DHEVVSKEEACEFLKLIKQSEYKVIEQLHRTPARISMLSLFTYSEPHRKVLLDILNRAHV 780

Query: 781 GHDVSVNALSEIVENITATNCISFTDEEIPPEGTGHTKALHISVKCKDHHVARVLVDNGS 822
           GHD+SVNALSEIVENITATNCISFTDEEIPPEGTGHTKALHISVKCKDHHVARVLVDNGS
Sbjct: 781 GHDISVNALSEIVENITATNCISFTDEEIPPEGTGHTKALHISVKCKDHHVARVLVDNGS 840

[Close]

BLAST of IVF0022147.2 vs. ExPASy TrEMBL
Match: A0A5A7V681 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold455G00760 PE=4 SV=1)

HSP 1 Score: 1587.8 bits (4110), Expect = 0.0e+00
Identity = 807/897 (89.97%), Postives = 812/897 (90.52%), Query Frame = 0


Query: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDMPAYP 60
           MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDMPAYP
Sbjct: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDMPAYP 60

Query: 61  PGFTPQRSSSPRMGDRTYPTSFPAPNPNTTTQQAAHANNPISTLIMEGGKKISEEQGSRR 120
           PGFTPQRSSSPRMGDRTYPTSFP PNPNTTTQQ AHANNPISTLIMEGGKKISEEQGSRR
Sbjct: 61  PGFTPQRSSSPRMGDRTYPTSFPTPNPNTTTQQVAHANNPISTLIMEGGKKISEEQGSRR 120

Query: 121 RLEFLEERLRVIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGT-MSKKHLVMYC 180
           RLEFLEERLRVIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGT   K HLVMYC
Sbjct: 121 RLEFLEERLRVIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTSCPKSHLVMYC 180

Query: 181 RKMSAYAHDDKLLIHCFQDSLVGPASRWYMQLD--------------------------- 240
           RKMSAYAHDDKLLIHCFQD+LVGPASRWYMQLD                           
Sbjct: 181 RKMSAYAHDDKLLIHCFQDNLVGPASRWYMQLDGSQVHRWKDLADSFLKQYKYNIDMAPD 240

Query: 241 --DLQRMEKKNVETFKEYAQRWRELAAQVQPPLTDKELTAMFINTLRAPYYDRMVGSAST 300
             DLQRMEKKNVETFKEYAQRWRELAAQVQPP TDKELTAMFINTLRAPYYDRMVGSAST
Sbjct: 241 RLDLQRMEKKNVETFKEYAQRWRELAAQVQPPRTDKELTAMFINTLRAPYYDRMVGSAST 300

Query: 301 NFSDVITIGERIEFGVKNGRISDPASETRRVMTPKKKEGEVHELSSTQRVATRVSSPIVG 360
           NFSDVITIGERIEFGVKN RISDPASETRRVMTPKKKEGEVHELSSTQRVATRVSSPIVG
Sbjct: 301 NFSDVITIGERIEFGVKNRRISDPASETRRVMTPKKKEGEVHELSSTQRVATRVSSPIVG 360

Query: 361 QTNFSPSYQNGGQSPFGQSTQRNIRNNWKQTRFDPIPMSYTELLPQLIKSHQVAIVPQEP 420
           QTNFSPSYQNGGQSPFGQSTQRNIRNNWKQTRFDPIPMSYTELLPQLIKSHQVAIVPQEP
Sbjct: 361 QTNFSPSYQNGGQSPFGQSTQRNIRNNWKQTRFDPIPMSYTELLPQLIKSHQVAIVPQEP 420

Query: 421 LQPPYPKWYDPNAKCEYHAGAVGHSTENCFPLKAKVQSLVKAGWLRFKKTGEEPDVNQNP 480
           LQPPYPKWYDPNAKCEYHAGAVGHSTENCFPLKAKVQSLVKAGWLRFKKTGEEPDVNQNP
Sbjct: 421 LQPPYPKWYDPNAKCEYHAGAVGHSTENCFPLKAKVQSLVKAGWLRFKKTGEEPDVNQNP 480

Query: 481 LPNHEGPSINAVDTFMQRHKNKVSDVATSMKTLFQILHGAGYLSPRFNNDDREKIGCTNN 540
           LPNHEGPSINAVDTF+QRHKNKVSDVATSMKTLFQILHGAGYLSPRFNNDDREKIGCTNN
Sbjct: 481 LPNHEGPSINAVDTFIQRHKNKVSDVATSMKTLFQILHGAGYLSPRFNNDDREKIGCTNN 540

Query: 541 EQCLFHPETNDHSIEDCCEFKNE--------------MSMQEIEVNMITNASSSEKTSNE 600
           EQCLFHPETNDHSIEDCCEFKNE              MSMQEIEVNMITNASS+EKTSNE
Sbjct: 541 EQCLFHPETNDHSIEDCCEFKNEVQKLMDSKILLIGQMSMQEIEVNMITNASSNEKTSNE 600

Query: 601 TTFMWKPLVIHYEEKPSIMSYIQKPKAMTVEIPGPFAYKDNHAVPWKYECQFITDNVVSA 660
           TTFMWKP VIHYEEKPSIMSYIQKPKAMTVEIPGPFAYKDNHAVPWKYECQFITDNVVSA
Sbjct: 601 TTFMWKPFVIHYEEKPSIMSYIQKPKAMTVEIPGPFAYKDNHAVPWKYECQFITDNVVSA 660

Query: 661 TVGGITRSGRCYTPDNLKDVTKEDEVRRRKGKAIEMAGEDDLNDLSK------------- 720
           TVGGITRSGRCYTPDNLKDV+KEDEVRRRKGKAIEMAGEDDLNDLSK             
Sbjct: 661 TVGGITRSGRCYTPDNLKDVSKEDEVRRRKGKAIEMAGEDDLNDLSKVFTKKNTLVEKET 720

Query: 721 -------------------SEYKVIEQLHRTPARISMLSLFMYSEPHRKVLLDILNRAHV 780
                              SEYKVIEQLHRTPARISMLSLFMYSEPHRKVLLDILNRAHV
Sbjct: 721 DHEVVSKEEACEFLKLIKQSEYKVIEQLHRTPARISMLSLFMYSEPHRKVLLDILNRAHV 780

Query: 781 GHDVSVNALSEIVENITATNCISFTDEEIPPEGTGHTKALHISVKCKDHHVARVLVDNGS 822
           GHD+SVNALSEIVENI ATNCISFTDEEIPPEGTGHTKALHISVKCKDHHVARVLVDNGS
Sbjct: 781 GHDISVNALSEIVENIIATNCISFTDEEIPPEGTGHTKALHISVKCKDHHVARVLVDNGS 840

[Close]

BLAST of IVF0022147.2 vs. ExPASy TrEMBL
Match: A0A5A7SUT0 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold845G00100 PE=4 SV=1)

HSP 1 Score: 1278.5 bits (3307), Expect = 0.0e+00
Identity = 679/860 (78.95%), Postives = 690/860 (80.23%), Query Frame = 0


Query: 8    QVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDMPAYPPGFTPQR 67
            Q   +RQDVEGLKDQLAKILELLTTGRGKSV GTSSQVEVDLNQVLEDMPAYPPGFTPQR
Sbjct: 597  QCLGLRQDVEGLKDQLAKILELLTTGRGKSVVGTSSQVEVDLNQVLEDMPAYPPGFTPQR 656

Query: 68   SSSPRMGDRTYPTSFPAPNPNTTTQQAAHANNPISTLIMEGGKKISEEQGSRRRLEFLEE 127
            SSSPRMGDRTYPTSFPAPNPNTTTQQ AHANNPISTLIMEGGKKISEEQGSRRRLEFLEE
Sbjct: 657  SSSPRMGDRTYPTSFPAPNPNTTTQQEAHANNPISTLIMEGGKKISEEQGSRRRLEFLEE 716

Query: 128  RLRVIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGT-MSKKHLVMYCRKMSAYA 187
            RLRVIE                            DFEKYNGT   K HLVMYCRKMSAYA
Sbjct: 717  RLRVIE----------------------------DFEKYNGTSCPKSHLVMYCRKMSAYA 776

Query: 188  HDDKLLIHCFQDSLVGPASRWYMQLD-----------------------------DLQRM 247
            HDDKLLIHCFQDSLV PASRWYMQLD                             DLQRM
Sbjct: 777  HDDKLLIHCFQDSLVDPASRWYMQLDGSQVHRWKDLADSFLKQYKYNIDMAPDRLDLQRM 836

Query: 248  EKKNVETFKEYAQRWRELAAQVQPPLTDKELTAMFINTLRAPYYDRMVGSASTNFSDVIT 307
            EKKNVETFKEYAQRWRELAAQVQPPLTDKELTAMFINTLRAPYYDRMVGSASTNFSDVIT
Sbjct: 837  EKKNVETFKEYAQRWRELAAQVQPPLTDKELTAMFINTLRAPYYDRMVGSASTNFSDVIT 896

Query: 308  IGERIEFGVKNGRISDPASETRRVMTPKKKEGEVHELSSTQRVATRVSSPIVGQTNFSPS 367
            IGERIEFGVKNGRISDPASETRRVMTPKKKEGEVHELSSTQRVATRVSSPIVGQTNFSPS
Sbjct: 897  IGERIEFGVKNGRISDPASETRRVMTPKKKEGEVHELSSTQRVATRVSSPIVGQTNFSPS 956

Query: 368  YQNGGQSPFGQSTQRNIRNNWKQTRFDPIPMSYTELLPQLIKSHQVAIVPQEPLQPPYPK 427
            YQNGGQSPFGQSTQRNIRNNWKQTRFDPIPMSYTELLP LIKSHQVAIVPQEPLQPPYPK
Sbjct: 957  YQNGGQSPFGQSTQRNIRNNWKQTRFDPIPMSYTELLPHLIKSHQVAIVPQEPLQPPYPK 1016

Query: 428  WYDPNAKCEYHAGAVGHSTENCFPLKAKVQSLVKAGWLRFKKTGEEPDVNQNPLPNHEGP 487
            WYDPNAKCEYHAGAVGHSTENCFPLKAKVQSLVKAGWLRFKKTGEEPDVNQNPLPNHEGP
Sbjct: 1017 WYDPNAKCEYHAGAVGHSTENCFPLKAKVQSLVKAGWLRFKKTGEEPDVNQNPLPNHEGP 1076

Query: 488  SINAVDTFMQRHKNKVSDVATSMKTLFQILHGAGYLSPRFNNDDREKIGCTNNEQCLFHP 547
            SINAVDTFMQRHKNKVSDVATSMKTLFQILHGAGYLSPRFNNDDREKIGCTNNEQCL HP
Sbjct: 1077 SINAVDTFMQRHKNKVSDVATSMKTLFQILHGAGYLSPRFNNDDREKIGCTNNEQCLLHP 1136

Query: 548  ETNDHSIEDCCEFKNE--------------MSMQEIEVNMITNASSSEKTSNETTFMWKP 607
            ETNDHSIEDCCEFKNE              MSMQ+IEVNMITNASS+EKTSNETTFMWKP
Sbjct: 1137 ETNDHSIEDCCEFKNEVQKLMDSKILLIGQMSMQKIEVNMITNASSNEKTSNETTFMWKP 1196

Query: 608  LVIHYEEKPSIMSYIQKPKAMTVEIPGPFAYKDNHAVPWKYECQFITDNVVSATVGGITR 667
            LVIHYEEKPSIMSYIQKPKAMTVEIP                            VGGITR
Sbjct: 1197 LVIHYEEKPSIMSYIQKPKAMTVEIP----------------------------VGGITR 1256

Query: 668  SGRCYTPDNLKDVTKEDEVRRRKGKAIEMAGEDDLNDLSKSEYKVIEQLHRTPARISMLS 727
            SGRCYTPDNLKDV+KEDEVRRRKGKAIEMAGEDDLNDLSK                    
Sbjct: 1257 SGRCYTPDNLKDVSKEDEVRRRKGKAIEMAGEDDLNDLSK-------------------- 1316

Query: 728  LFMYSEPHRKVLLDILNRAHVGHDVSVNALSEIVENITATNCISFTD--EEIPPEGTGHT 787
              +++E                        + +VE  T    +S  +  EEIPPEGTGHT
Sbjct: 1317 --VFTEK-----------------------NTLVEKETDHEVVSKEEAYEEIPPEGTGHT 1355

Query: 788  KALHISVKCKDHHVARVLVDNGSSLNIMSRSTLMKLPIDPSYLRPSTMVVRAFDGARREV 822
            KALHISVKCKDHHVARVLVDNGSSLNIMSRSTLMKLPIDPSYLRPSTMVVRAFD A REV
Sbjct: 1377 KALHISVKCKDHHVARVLVDNGSSLNIMSRSTLMKLPIDPSYLRPSTMVVRAFDSACREV 1355

[Close]

BLAST of IVF0022147.2 vs. ExPASy TrEMBL
Match: A0A5A7TUT4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold114G001540 PE=4 SV=1)

HSP 1 Score: 1175.2 bits (3039), Expect = 0.0e+00
Identity = 592/651 (90.94%), Postives = 598/651 (91.86%), Query Frame = 0


Query: 217 MEKKNVETFKEYAQRWRELAAQVQPPLTDKELTAMFINTLRAPYYDRMVGSASTNFSDVI 276
           ME KNVETFKEYAQRWRELAAQVQPPLTDKELTAMFINTLRAPYYDRMVGSASTNFSDVI
Sbjct: 1   MEIKNVETFKEYAQRWRELAAQVQPPLTDKELTAMFINTLRAPYYDRMVGSASTNFSDVI 60

Query: 277 TIGERIEFGVKNGRISDPASETRRVMTPKKKEGEVHELSSTQRVATRVSSPIVGQTNFSP 336
            IGERIEFGVKNGRISDPASETRRVMTPKKKEGEVHELSSTQRVATRVSSPIVGQTNFSP
Sbjct: 61  IIGERIEFGVKNGRISDPASETRRVMTPKKKEGEVHELSSTQRVATRVSSPIVGQTNFSP 120

Query: 337 SYQNGGQSPFGQSTQRNIRNNWKQTRFDPIPMSYTELLPQLIKSHQVAIVPQEPLQPPYP 396
           SYQNGGQSPFGQSTQRNIRNNWKQTRFDPIPMSYTELLPQLIKSHQVAIVPQEPLQPPYP
Sbjct: 121 SYQNGGQSPFGQSTQRNIRNNWKQTRFDPIPMSYTELLPQLIKSHQVAIVPQEPLQPPYP 180

Query: 397 KWYDPNAKCEYHAGAVGHSTENCFPLKAKVQSLVKAGWLRFKKTGEEPDVNQNPLPNHEG 456
           KWYDPNAKCEYHAGAVGHSTENCFPLKAKVQSLVKAGWLRFKKTGEEPDVNQNPLPNHEG
Sbjct: 181 KWYDPNAKCEYHAGAVGHSTENCFPLKAKVQSLVKAGWLRFKKTGEEPDVNQNPLPNHEG 240

Query: 457 PSINAVDTFMQRHKNKVSDVATSMKTLFQILHGAGYLSPRFNNDDREKIGCTNNEQCLFH 516
           PSINAVDTFMQRHKNKVSDVATSMKTLFQILHG+GYLSPRFNNDDR+KIGCTNNEQCLFH
Sbjct: 241 PSINAVDTFMQRHKNKVSDVATSMKTLFQILHGSGYLSPRFNNDDRKKIGCTNNEQCLFH 300

Query: 517 PETNDHSIEDCCEFKNE--------------MSMQEIEVNMITNASSSEKTSNETTFMWK 576
           PETNDHSIEDCCEFKNE              MSMQEIEVNMITNASS+EKTSNETTFMWK
Sbjct: 301 PETNDHSIEDCCEFKNEVQKLMNSKILLIGQMSMQEIEVNMITNASSNEKTSNETTFMWK 360

Query: 577 PLVIHYEEKPSIMSYIQKPKAMTVEIPGPFAYKDNHAVPWKYECQFITDNVVSATVGGIT 636
           PLVIHYEEK SIMSYIQKPKAMTVEIPGPFAYKDNHAVPWKYECQFITDNVVSATVGGIT
Sbjct: 361 PLVIHYEEKSSIMSYIQKPKAMTVEIPGPFAYKDNHAVPWKYECQFITDNVVSATVGGIT 420

Query: 637 RSGRCYTPDNLKDVTKEDEVRRRKGKAIEMAGEDDLNDLSK------------------- 696
           RSGRCYT DNLKDV+KEDEVRRRKGKAIEMA EDDLNDLSK                   
Sbjct: 421 RSGRCYTLDNLKDVSKEDEVRRRKGKAIEMACEDDLNDLSKVFTEKNTLVEKETDHEVVS 480

Query: 697 -------------SEYKVIEQLHRTPARISMLSLFMYSEPHRKVLLDILNRAHVGHDVSV 756
                        SEYKVIEQLHRT ARISMLSLFMYSEPHRKVLLDILNRAHVGHD+SV
Sbjct: 481 KEEACEFLKLIKQSEYKVIEQLHRTSARISMLSLFMYSEPHRKVLLDILNRAHVGHDISV 540

Query: 757 NALSEIVENITATNCISFTDEEIPPEGTGHTKALHISVKCKDHHVARVLVDNGSSLNIMS 816
           NALSEIVENITATNCISFTDEEIPPEGTGHTKALHISVKCKDHHVARVLVDNGSSLNIMS
Sbjct: 541 NALSEIVENITATNCISFTDEEIPPEGTGHTKALHISVKCKDHHVARVLVDNGSSLNIMS 600

Query: 817 RSTLMKLPIDPSYLRPSTMVVRAFDGARREVIGDIDIPLKIGPSTFNVSFQ 822
           RSTLMKLPIDPSYLRPSTMVVRAFDGARREVI DIDIPLKIGPSTFN+SFQ
Sbjct: 601 RSTLMKLPIDPSYLRPSTMVVRAFDGARREVIEDIDIPLKIGPSTFNISFQ 651

[Close]

BLAST of IVF0022147.2 vs. ExPASy TrEMBL
Match: A0A5A7ULI2 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold231G00770 PE=4 SV=1)

HSP 1 Score: 899.8 bits (2324), Expect = 1.1e-257
Identity = 466/591 (78.85%), Postives = 490/591 (82.91%), Query Frame = 0


Query: 8   QVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDMPAYPPGFTPQR 67
           +VQAVRQDVEGLKDQLAKILELLTTGRGKSV G SSQVEVDLNQVLEDMPAYP GFTPQR
Sbjct: 22  KVQAVRQDVEGLKDQLAKILELLTTGRGKSVTGISSQVEVDLNQVLEDMPAYPQGFTPQR 81

Query: 68  SSSPRMGDRTYPTSFPAPNPNTTTQQAAHANNPISTLIMEGGKKISEEQGSRRRLEFLEE 127
           SSSP M   TYPT     NPN  TQQ  H ++P+ST I E GKKISEEQGSR+RLEFLEE
Sbjct: 82  SSSPCM---TYPTQ----NPNPITQQENHVSDPMSTPITESGKKISEEQGSRKRLEFLEE 141

Query: 128 RLRVIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNG-TMSKKHLVMYCRKMSAYA 187
           RLR I+GADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNG T  K HLVMYCRKMSAYA
Sbjct: 142 RLRAIKGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTTCPKSHLVMYCRKMSAYA 201

Query: 188 HDDKLLIHCFQDSLVGPASRWYMQLD-----------------------------DLQRM 247
           HD+KLLIHCFQDSLVGPASRWYMQLD                             DLQRM
Sbjct: 202 HDNKLLIHCFQDSLVGPASRWYMQLDGSQVHRWKDLADSFLKQYKYNIDMAPDRLDLQRM 261

Query: 248 EKKNVETFKEYAQRWRELAAQVQPPLTDKELTAMFINTLRAPYYDRMVGSASTNFSDVIT 307
           EKKNVETFKEYAQRWRELAAQVQPPLTDKEL AMFINTLRAPYYDRMVGSASTNFSDVIT
Sbjct: 262 EKKNVETFKEYAQRWRELAAQVQPPLTDKELMAMFINTLRAPYYDRMVGSASTNFSDVIT 321

Query: 308 IGERIEFGVKNGRISDPASETRRVMTPKKKEGEVHELSSTQRVATRVSSPIVGQTNFSPS 367
           IGERIEFGVKNGRISDPASE RR+MTPKKKE E+HELSSTQRV   VSSPIVGQTN+S S
Sbjct: 322 IGERIEFGVKNGRISDPASEIRRMMTPKKKEEEIHELSSTQRV-VHVSSPIVGQTNYSYS 381

Query: 368 YQNGGQSPFGQSTQRNIRNNWKQTRFDPIPMSYTELLPQLIKSHQVAIVPQEPLQPPYPK 427
           YQNGG+SPF Q+TQRN RN+WKQT FDPIPMSYTELLPQL+KSHQVAIVPQEPLQPPYPK
Sbjct: 382 YQNGGKSPFSQATQRNARNSWKQTYFDPIPMSYTELLPQLLKSHQVAIVPQEPLQPPYPK 441

Query: 428 WYDPNAKCEYHAGAVGHSTENCFPLKAKVQSLVKAGWLRFKKTGEEPDVNQNPLPNHEGP 487
           WYDPN KCEYHAG VGHSTENCFPLKAKVQSLVKAGWL+FKK  EE DVNQNPLPNHEGP
Sbjct: 442 WYDPNVKCEYHAGVVGHSTENCFPLKAKVQSLVKAGWLKFKKIEEESDVNQNPLPNHEGP 501

Query: 488 SINAVDTFMQRHKNKVSDVATSMKTLFQILHGAGYLSPRFNNDDREKIGCTNNEQCLFHP 547
           +IN VDTF +R+KNKV DV TSM TLFQIL  AGYLSPRFNND+ EK GC N +QCLFHP
Sbjct: 502 AINIVDTFTERYKNKVCDVTTSMNTLFQILRRAGYLSPRFNNDEGEKFGCANEKQCLFHP 561

Query: 548 ETNDHSIEDCCEFKNE--------------MSMQEIEVNMITNASSSEKTS 555
           E +DH IEDCCEFKNE              MSMQEIEV+MI +  +S  TS
Sbjct: 562 EIDDHFIEDCCEFKNEVQKLMDAKILLVGQMSMQEIEVDMIIDKETSNDTS 604

[Close]

BLAST of IVF0022147.2 vs. NCBI nr
Match: KAA0065293.1 (uncharacterized protein E6C27_scaffold1023G00060 [Cucumis melo var. makuwa])

HSP 1 Score: 1586 bits (4106), Expect = 0.0
Identity = 809/897 (90.19%), Postives = 812/897 (90.52%), Query Frame = 0


Query: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDMPAYP 60
           MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSV GTSSQVEVDLNQVLEDMP YP
Sbjct: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVVGTSSQVEVDLNQVLEDMPTYP 60

Query: 61  PGFTPQRSSSPRMGDRTYPTSFPAPNPNTTTQQAAHANNPISTLIMEGGKKISEEQGSRR 120
           PGFTPQRSSSPRMGDRTYPTSFPAPNPNTTTQQAAHANNPISTLIMEGGKKISEEQGSRR
Sbjct: 61  PGFTPQRSSSPRMGDRTYPTSFPAPNPNTTTQQAAHANNPISTLIMEGGKKISEEQGSRR 120

Query: 121 RLEFLEERLRVIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTMS-KKHLVMYC 180
           RLEFLEERLRVIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGT   K HLVMYC
Sbjct: 121 RLEFLEERLRVIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTSCPKSHLVMYC 180

Query: 181 RKMSAYAHDDKLLIHCFQDSLVGPASRWYMQLD--------------------------- 240
           RKMSAYAHDDKLLIHCFQDSLVGPASRWYMQLD                           
Sbjct: 181 RKMSAYAHDDKLLIHCFQDSLVGPASRWYMQLDGSQVHRWKDLADSFLKQYKYNIDMAPD 240

Query: 241 --DLQRMEKKNVETFKEYAQRWRELAAQVQPPLTDKELTAMFINTLRAPYYDRMVGSAST 300
             DLQRMEKKNVETFKEYAQRWRELAAQVQPPLTDKELTAMFINTLRAPYYDRMVGSAST
Sbjct: 241 RLDLQRMEKKNVETFKEYAQRWRELAAQVQPPLTDKELTAMFINTLRAPYYDRMVGSAST 300

Query: 301 NFSDVITIGERIEFGVKNGRISDPASETRRVMTPKKKEGEVHELSSTQRVATRVSSPIVG 360
           NFSDVITIGERIEFGVKNGRISDPASETRRVMTPKKKEGEVHELSSTQRVATRVSSPIVG
Sbjct: 301 NFSDVITIGERIEFGVKNGRISDPASETRRVMTPKKKEGEVHELSSTQRVATRVSSPIVG 360

Query: 361 QTNFSPSYQNGGQSPFGQSTQRNIRNNWKQTRFDPIPMSYTELLPQLIKSHQVAIVPQEP 420
           QTNFSPSYQNGGQSPFGQSTQRNIRNNWKQTRFDPIPMSYTELLPQLIKSHQVAIVPQEP
Sbjct: 361 QTNFSPSYQNGGQSPFGQSTQRNIRNNWKQTRFDPIPMSYTELLPQLIKSHQVAIVPQEP 420

Query: 421 LQPPYPKWYDPNAKCEYHAGAVGHSTENCFPLKAKVQSLVKAGWLRFKKTGEEPDVNQNP 480
           LQPPYPKWYDPNAKCEYHAGAVGHSTENCFPLKAKVQSLVKAGWLRFKKTGEEPDVNQNP
Sbjct: 421 LQPPYPKWYDPNAKCEYHAGAVGHSTENCFPLKAKVQSLVKAGWLRFKKTGEEPDVNQNP 480

Query: 481 LPNHEGPSINAVDTFMQRHKNKVSDVATSMKTLFQILHGAGYLSPRFNNDDREKIGCTNN 540
           LPNHEGP INAVDTFMQRHKNKVSDVATSMKTLFQILHGAGYLSPRFNNDDREKIGCTNN
Sbjct: 481 LPNHEGPIINAVDTFMQRHKNKVSDVATSMKTLFQILHGAGYLSPRFNNDDREKIGCTNN 540

Query: 541 EQCLFHPETNDHSIEDCCEFKNE--------------MSMQEIEVNMITNASSSEKTSNE 600
           EQCLFHPETNDHSIEDCCEFKNE              MSMQEIEVNMITNASS+EKTSNE
Sbjct: 541 EQCLFHPETNDHSIEDCCEFKNEVQKLMDSKILLIGQMSMQEIEVNMITNASSNEKTSNE 600

Query: 601 TTFMWKPLVIHYEEKPSIMSYIQKPKAMTVEIPGPFAYKDNHAVPWKYECQFITDNVVSA 660
           TTFMWKPLVIHYEEKPSIMSYIQKPKAMTVEIPGPFAYKDNHAVPWKYECQFITDNVV A
Sbjct: 601 TTFMWKPLVIHYEEKPSIMSYIQKPKAMTVEIPGPFAYKDNHAVPWKYECQFITDNVVFA 660

Query: 661 TVGGITRSGRCYTPDNLKDVTKEDEVRRRKGKAIEMAGEDDLNDLSK------------- 720
           TV GITRSGRCYTPDNLKDV+KEDEVRRRKGKAIEMAGEDDLNDLSK             
Sbjct: 661 TVEGITRSGRCYTPDNLKDVSKEDEVRRRKGKAIEMAGEDDLNDLSKVFTEKNTLVEKET 720

Query: 721 -------------------SEYKVIEQLHRTPARISMLSLFMYSEPHRKVLLDILNRAHV 780
                              SEYKVIEQLHRTPARISMLSLF YSEPHRKVLLDILNRAHV
Sbjct: 721 DHEVVSKEEACEFLKLIKQSEYKVIEQLHRTPARISMLSLFTYSEPHRKVLLDILNRAHV 780

Query: 781 GHDVSVNALSEIVENITATNCISFTDEEIPPEGTGHTKALHISVKCKDHHVARVLVDNGS 821
           GHD+SVNALSEIVENITATNCISFTDEEIPPEGTGHTKALHISVKCKDHHVARVLVDNGS
Sbjct: 781 GHDISVNALSEIVENITATNCISFTDEEIPPEGTGHTKALHISVKCKDHHVARVLVDNGS 840

[Close]

BLAST of IVF0022147.2 vs. NCBI nr
Match: KAA0061241.1 (uncharacterized protein E6C27_scaffold455G00760 [Cucumis melo var. makuwa])

HSP 1 Score: 1584 bits (4101), Expect = 0.0
Identity = 807/897 (89.97%), Postives = 812/897 (90.52%), Query Frame = 0


Query: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDMPAYP 60
           MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDMPAYP
Sbjct: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDMPAYP 60

Query: 61  PGFTPQRSSSPRMGDRTYPTSFPAPNPNTTTQQAAHANNPISTLIMEGGKKISEEQGSRR 120
           PGFTPQRSSSPRMGDRTYPTSFP PNPNTTTQQ AHANNPISTLIMEGGKKISEEQGSRR
Sbjct: 61  PGFTPQRSSSPRMGDRTYPTSFPTPNPNTTTQQVAHANNPISTLIMEGGKKISEEQGSRR 120

Query: 121 RLEFLEERLRVIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTMS-KKHLVMYC 180
           RLEFLEERLRVIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGT   K HLVMYC
Sbjct: 121 RLEFLEERLRVIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTSCPKSHLVMYC 180

Query: 181 RKMSAYAHDDKLLIHCFQDSLVGPASRWYMQLD--------------------------- 240
           RKMSAYAHDDKLLIHCFQD+LVGPASRWYMQLD                           
Sbjct: 181 RKMSAYAHDDKLLIHCFQDNLVGPASRWYMQLDGSQVHRWKDLADSFLKQYKYNIDMAPD 240

Query: 241 --DLQRMEKKNVETFKEYAQRWRELAAQVQPPLTDKELTAMFINTLRAPYYDRMVGSAST 300
             DLQRMEKKNVETFKEYAQRWRELAAQVQPP TDKELTAMFINTLRAPYYDRMVGSAST
Sbjct: 241 RLDLQRMEKKNVETFKEYAQRWRELAAQVQPPRTDKELTAMFINTLRAPYYDRMVGSAST 300

Query: 301 NFSDVITIGERIEFGVKNGRISDPASETRRVMTPKKKEGEVHELSSTQRVATRVSSPIVG 360
           NFSDVITIGERIEFGVKN RISDPASETRRVMTPKKKEGEVHELSSTQRVATRVSSPIVG
Sbjct: 301 NFSDVITIGERIEFGVKNRRISDPASETRRVMTPKKKEGEVHELSSTQRVATRVSSPIVG 360

Query: 361 QTNFSPSYQNGGQSPFGQSTQRNIRNNWKQTRFDPIPMSYTELLPQLIKSHQVAIVPQEP 420
           QTNFSPSYQNGGQSPFGQSTQRNIRNNWKQTRFDPIPMSYTELLPQLIKSHQVAIVPQEP
Sbjct: 361 QTNFSPSYQNGGQSPFGQSTQRNIRNNWKQTRFDPIPMSYTELLPQLIKSHQVAIVPQEP 420

Query: 421 LQPPYPKWYDPNAKCEYHAGAVGHSTENCFPLKAKVQSLVKAGWLRFKKTGEEPDVNQNP 480
           LQPPYPKWYDPNAKCEYHAGAVGHSTENCFPLKAKVQSLVKAGWLRFKKTGEEPDVNQNP
Sbjct: 421 LQPPYPKWYDPNAKCEYHAGAVGHSTENCFPLKAKVQSLVKAGWLRFKKTGEEPDVNQNP 480

Query: 481 LPNHEGPSINAVDTFMQRHKNKVSDVATSMKTLFQILHGAGYLSPRFNNDDREKIGCTNN 540
           LPNHEGPSINAVDTF+QRHKNKVSDVATSMKTLFQILHGAGYLSPRFNNDDREKIGCTNN
Sbjct: 481 LPNHEGPSINAVDTFIQRHKNKVSDVATSMKTLFQILHGAGYLSPRFNNDDREKIGCTNN 540

Query: 541 EQCLFHPETNDHSIEDCCEFKNE--------------MSMQEIEVNMITNASSSEKTSNE 600
           EQCLFHPETNDHSIEDCCEFKNE              MSMQEIEVNMITNASS+EKTSNE
Sbjct: 541 EQCLFHPETNDHSIEDCCEFKNEVQKLMDSKILLIGQMSMQEIEVNMITNASSNEKTSNE 600

Query: 601 TTFMWKPLVIHYEEKPSIMSYIQKPKAMTVEIPGPFAYKDNHAVPWKYECQFITDNVVSA 660
           TTFMWKP VIHYEEKPSIMSYIQKPKAMTVEIPGPFAYKDNHAVPWKYECQFITDNVVSA
Sbjct: 601 TTFMWKPFVIHYEEKPSIMSYIQKPKAMTVEIPGPFAYKDNHAVPWKYECQFITDNVVSA 660

Query: 661 TVGGITRSGRCYTPDNLKDVTKEDEVRRRKGKAIEMAGEDDLNDLSK------------- 720
           TVGGITRSGRCYTPDNLKDV+KEDEVRRRKGKAIEMAGEDDLNDLSK             
Sbjct: 661 TVGGITRSGRCYTPDNLKDVSKEDEVRRRKGKAIEMAGEDDLNDLSKVFTKKNTLVEKET 720

Query: 721 -------------------SEYKVIEQLHRTPARISMLSLFMYSEPHRKVLLDILNRAHV 780
                              SEYKVIEQLHRTPARISMLSLFMYSEPHRKVLLDILNRAHV
Sbjct: 721 DHEVVSKEEACEFLKLIKQSEYKVIEQLHRTPARISMLSLFMYSEPHRKVLLDILNRAHV 780

Query: 781 GHDVSVNALSEIVENITATNCISFTDEEIPPEGTGHTKALHISVKCKDHHVARVLVDNGS 821
           GHD+SVNALSEIVENI ATNCISFTDEEIPPEGTGHTKALHISVKCKDHHVARVLVDNGS
Sbjct: 781 GHDISVNALSEIVENIIATNCISFTDEEIPPEGTGHTKALHISVKCKDHHVARVLVDNGS 840

[Close]

BLAST of IVF0022147.2 vs. NCBI nr
Match: KAA0033221.1 (uncharacterized protein E6C27_scaffold845G00100 [Cucumis melo var. makuwa])

HSP 1 Score: 1276 bits (3301), Expect = 0.0
Identity = 678/856 (79.21%), Postives = 689/856 (80.49%), Query Frame = 0


Query: 12   VRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDMPAYPPGFTPQRSSSP 71
            +RQDVEGLKDQLAKILELLTTGRGKSV GTSSQVEVDLNQVLEDMPAYPPGFTPQRSSSP
Sbjct: 601  LRQDVEGLKDQLAKILELLTTGRGKSVVGTSSQVEVDLNQVLEDMPAYPPGFTPQRSSSP 660

Query: 72   RMGDRTYPTSFPAPNPNTTTQQAAHANNPISTLIMEGGKKISEEQGSRRRLEFLEERLRV 131
            RMGDRTYPTSFPAPNPNTTTQQ AHANNPISTLIMEGGKKISEEQGSRRRLEFLEERLRV
Sbjct: 661  RMGDRTYPTSFPAPNPNTTTQQEAHANNPISTLIMEGGKKISEEQGSRRRLEFLEERLRV 720

Query: 132  IEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTMS-KKHLVMYCRKMSAYAHDDK 191
            IE                            DFEKYNGT   K HLVMYCRKMSAYAHDDK
Sbjct: 721  IE----------------------------DFEKYNGTSCPKSHLVMYCRKMSAYAHDDK 780

Query: 192  LLIHCFQDSLVGPASRWYMQLD-----------------------------DLQRMEKKN 251
            LLIHCFQDSLV PASRWYMQLD                             DLQRMEKKN
Sbjct: 781  LLIHCFQDSLVDPASRWYMQLDGSQVHRWKDLADSFLKQYKYNIDMAPDRLDLQRMEKKN 840

Query: 252  VETFKEYAQRWRELAAQVQPPLTDKELTAMFINTLRAPYYDRMVGSASTNFSDVITIGER 311
            VETFKEYAQRWRELAAQVQPPLTDKELTAMFINTLRAPYYDRMVGSASTNFSDVITIGER
Sbjct: 841  VETFKEYAQRWRELAAQVQPPLTDKELTAMFINTLRAPYYDRMVGSASTNFSDVITIGER 900

Query: 312  IEFGVKNGRISDPASETRRVMTPKKKEGEVHELSSTQRVATRVSSPIVGQTNFSPSYQNG 371
            IEFGVKNGRISDPASETRRVMTPKKKEGEVHELSSTQRVATRVSSPIVGQTNFSPSYQNG
Sbjct: 901  IEFGVKNGRISDPASETRRVMTPKKKEGEVHELSSTQRVATRVSSPIVGQTNFSPSYQNG 960

Query: 372  GQSPFGQSTQRNIRNNWKQTRFDPIPMSYTELLPQLIKSHQVAIVPQEPLQPPYPKWYDP 431
            GQSPFGQSTQRNIRNNWKQTRFDPIPMSYTELLP LIKSHQVAIVPQEPLQPPYPKWYDP
Sbjct: 961  GQSPFGQSTQRNIRNNWKQTRFDPIPMSYTELLPHLIKSHQVAIVPQEPLQPPYPKWYDP 1020

Query: 432  NAKCEYHAGAVGHSTENCFPLKAKVQSLVKAGWLRFKKTGEEPDVNQNPLPNHEGPSINA 491
            NAKCEYHAGAVGHSTENCFPLKAKVQSLVKAGWLRFKKTGEEPDVNQNPLPNHEGPSINA
Sbjct: 1021 NAKCEYHAGAVGHSTENCFPLKAKVQSLVKAGWLRFKKTGEEPDVNQNPLPNHEGPSINA 1080

Query: 492  VDTFMQRHKNKVSDVATSMKTLFQILHGAGYLSPRFNNDDREKIGCTNNEQCLFHPETND 551
            VDTFMQRHKNKVSDVATSMKTLFQILHGAGYLSPRFNNDDREKIGCTNNEQCL HPETND
Sbjct: 1081 VDTFMQRHKNKVSDVATSMKTLFQILHGAGYLSPRFNNDDREKIGCTNNEQCLLHPETND 1140

Query: 552  HSIEDCCEFKNE--------------MSMQEIEVNMITNASSSEKTSNETTFMWKPLVIH 611
            HSIEDCCEFKNE              MSMQ+IEVNMITNASS+EKTSNETTFMWKPLVIH
Sbjct: 1141 HSIEDCCEFKNEVQKLMDSKILLIGQMSMQKIEVNMITNASSNEKTSNETTFMWKPLVIH 1200

Query: 612  YEEKPSIMSYIQKPKAMTVEIPGPFAYKDNHAVPWKYECQFITDNVVSATVGGITRSGRC 671
            YEEKPSIMSYIQKPKAMTVEIP                            VGGITRSGRC
Sbjct: 1201 YEEKPSIMSYIQKPKAMTVEIP----------------------------VGGITRSGRC 1260

Query: 672  YTPDNLKDVTKEDEVRRRKGKAIEMAGEDDLNDLSKSEYKVIEQLHRTPARISMLSLFMY 731
            YTPDNLKDV+KEDEVRRRKGKAIEMAGEDDLNDLSK                      ++
Sbjct: 1261 YTPDNLKDVSKEDEVRRRKGKAIEMAGEDDLNDLSK----------------------VF 1320

Query: 732  SEPHRKVLLDILNRAHVGHDVSVNALSEIVENITATNCISFTD--EEIPPEGTGHTKALH 791
            +E +                        +VE  T    +S  +  EEIPPEGTGHTKALH
Sbjct: 1321 TEKNT-----------------------LVEKETDHEVVSKEEAYEEIPPEGTGHTKALH 1355

Query: 792  ISVKCKDHHVARVLVDNGSSLNIMSRSTLMKLPIDPSYLRPSTMVVRAFDGARREVIGDI 821
            ISVKCKDHHVARVLVDNGSSLNIMSRSTLMKLPIDPSYLRPSTMVVRAFD A REVIGDI
Sbjct: 1381 ISVKCKDHHVARVLVDNGSSLNIMSRSTLMKLPIDPSYLRPSTMVVRAFDSACREVIGDI 1355

[Close]

BLAST of IVF0022147.2 vs. NCBI nr
Match: KAA0046608.1 (uncharacterized protein E6C27_scaffold114G001540 [Cucumis melo var. makuwa])

HSP 1 Score: 1171 bits (3030), Expect = 0.0
Identity = 592/651 (90.94%), Postives = 598/651 (91.86%), Query Frame = 0


Query: 217 MEKKNVETFKEYAQRWRELAAQVQPPLTDKELTAMFINTLRAPYYDRMVGSASTNFSDVI 276
           ME KNVETFKEYAQRWRELAAQVQPPLTDKELTAMFINTLRAPYYDRMVGSASTNFSDVI
Sbjct: 1   MEIKNVETFKEYAQRWRELAAQVQPPLTDKELTAMFINTLRAPYYDRMVGSASTNFSDVI 60

Query: 277 TIGERIEFGVKNGRISDPASETRRVMTPKKKEGEVHELSSTQRVATRVSSPIVGQTNFSP 336
            IGERIEFGVKNGRISDPASETRRVMTPKKKEGEVHELSSTQRVATRVSSPIVGQTNFSP
Sbjct: 61  IIGERIEFGVKNGRISDPASETRRVMTPKKKEGEVHELSSTQRVATRVSSPIVGQTNFSP 120

Query: 337 SYQNGGQSPFGQSTQRNIRNNWKQTRFDPIPMSYTELLPQLIKSHQVAIVPQEPLQPPYP 396
           SYQNGGQSPFGQSTQRNIRNNWKQTRFDPIPMSYTELLPQLIKSHQVAIVPQEPLQPPYP
Sbjct: 121 SYQNGGQSPFGQSTQRNIRNNWKQTRFDPIPMSYTELLPQLIKSHQVAIVPQEPLQPPYP 180

Query: 397 KWYDPNAKCEYHAGAVGHSTENCFPLKAKVQSLVKAGWLRFKKTGEEPDVNQNPLPNHEG 456
           KWYDPNAKCEYHAGAVGHSTENCFPLKAKVQSLVKAGWLRFKKTGEEPDVNQNPLPNHEG
Sbjct: 181 KWYDPNAKCEYHAGAVGHSTENCFPLKAKVQSLVKAGWLRFKKTGEEPDVNQNPLPNHEG 240

Query: 457 PSINAVDTFMQRHKNKVSDVATSMKTLFQILHGAGYLSPRFNNDDREKIGCTNNEQCLFH 516
           PSINAVDTFMQRHKNKVSDVATSMKTLFQILHG+GYLSPRFNNDDR+KIGCTNNEQCLFH
Sbjct: 241 PSINAVDTFMQRHKNKVSDVATSMKTLFQILHGSGYLSPRFNNDDRKKIGCTNNEQCLFH 300

Query: 517 PETNDHSIEDCCEFKNE--------------MSMQEIEVNMITNASSSEKTSNETTFMWK 576
           PETNDHSIEDCCEFKNE              MSMQEIEVNMITNASS+EKTSNETTFMWK
Sbjct: 301 PETNDHSIEDCCEFKNEVQKLMNSKILLIGQMSMQEIEVNMITNASSNEKTSNETTFMWK 360

Query: 577 PLVIHYEEKPSIMSYIQKPKAMTVEIPGPFAYKDNHAVPWKYECQFITDNVVSATVGGIT 636
           PLVIHYEEK SIMSYIQKPKAMTVEIPGPFAYKDNHAVPWKYECQFITDNVVSATVGGIT
Sbjct: 361 PLVIHYEEKSSIMSYIQKPKAMTVEIPGPFAYKDNHAVPWKYECQFITDNVVSATVGGIT 420

Query: 637 RSGRCYTPDNLKDVTKEDEVRRRKGKAIEMAGEDDLNDLSK------------------- 696
           RSGRCYT DNLKDV+KEDEVRRRKGKAIEMA EDDLNDLSK                   
Sbjct: 421 RSGRCYTLDNLKDVSKEDEVRRRKGKAIEMACEDDLNDLSKVFTEKNTLVEKETDHEVVS 480

Query: 697 -------------SEYKVIEQLHRTPARISMLSLFMYSEPHRKVLLDILNRAHVGHDVSV 756
                        SEYKVIEQLHRT ARISMLSLFMYSEPHRKVLLDILNRAHVGHD+SV
Sbjct: 481 KEEACEFLKLIKQSEYKVIEQLHRTSARISMLSLFMYSEPHRKVLLDILNRAHVGHDISV 540

Query: 757 NALSEIVENITATNCISFTDEEIPPEGTGHTKALHISVKCKDHHVARVLVDNGSSLNIMS 816
           NALSEIVENITATNCISFTDEEIPPEGTGHTKALHISVKCKDHHVARVLVDNGSSLNIMS
Sbjct: 541 NALSEIVENITATNCISFTDEEIPPEGTGHTKALHISVKCKDHHVARVLVDNGSSLNIMS 600

Query: 817 RSTLMKLPIDPSYLRPSTMVVRAFDGARREVIGDIDIPLKIGPSTFNVSFQ 821
           RSTLMKLPIDPSYLRPSTMVVRAFDGARREVI DIDIPLKIGPSTFN+SFQ
Sbjct: 601 RSTLMKLPIDPSYLRPSTMVVRAFDGARREVIEDIDIPLKIGPSTFNISFQ 651

[Close]

BLAST of IVF0022147.2 vs. NCBI nr
Match: KAA0055146.1 (uncharacterized protein E6C27_scaffold231G00770 [Cucumis melo var. makuwa])

HSP 1 Score: 897 bits (2319), Expect = 2.90e-314
Identity = 466/590 (78.98%), Postives = 489/590 (82.88%), Query Frame = 0


Query: 9   VQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDMPAYPPGFTPQRS 68
           VQAVRQDVEGLKDQLAKILELLTTGRGKSV G SSQVEVDLNQVLEDMPAYP GFTPQRS
Sbjct: 23  VQAVRQDVEGLKDQLAKILELLTTGRGKSVTGISSQVEVDLNQVLEDMPAYPQGFTPQRS 82

Query: 69  SSPRMGDRTYPTSFPAPNPNTTTQQAAHANNPISTLIMEGGKKISEEQGSRRRLEFLEER 128
           SSP M   TYPT     NPN  TQQ  H ++P+ST I E GKKISEEQGSR+RLEFLEER
Sbjct: 83  SSPCM---TYPTQ----NPNPITQQENHVSDPMSTPITESGKKISEEQGSRKRLEFLEER 142

Query: 129 LRVIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTMS-KKHLVMYCRKMSAYAH 188
           LR I+GADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGT   K HLVMYCRKMSAYAH
Sbjct: 143 LRAIKGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTTCPKSHLVMYCRKMSAYAH 202

Query: 189 DDKLLIHCFQDSLVGPASRWYMQLD-----------------------------DLQRME 248
           D+KLLIHCFQDSLVGPASRWYMQLD                             DLQRME
Sbjct: 203 DNKLLIHCFQDSLVGPASRWYMQLDGSQVHRWKDLADSFLKQYKYNIDMAPDRLDLQRME 262

Query: 249 KKNVETFKEYAQRWRELAAQVQPPLTDKELTAMFINTLRAPYYDRMVGSASTNFSDVITI 308
           KKNVETFKEYAQRWRELAAQVQPPLTDKEL AMFINTLRAPYYDRMVGSASTNFSDVITI
Sbjct: 263 KKNVETFKEYAQRWRELAAQVQPPLTDKELMAMFINTLRAPYYDRMVGSASTNFSDVITI 322

Query: 309 GERIEFGVKNGRISDPASETRRVMTPKKKEGEVHELSSTQRVATRVSSPIVGQTNFSPSY 368
           GERIEFGVKNGRISDPASE RR+MTPKKKE E+HELSSTQRV   VSSPIVGQTN+S SY
Sbjct: 323 GERIEFGVKNGRISDPASEIRRMMTPKKKEEEIHELSSTQRVV-HVSSPIVGQTNYSYSY 382

Query: 369 QNGGQSPFGQSTQRNIRNNWKQTRFDPIPMSYTELLPQLIKSHQVAIVPQEPLQPPYPKW 428
           QNGG+SPF Q+TQRN RN+WKQT FDPIPMSYTELLPQL+KSHQVAIVPQEPLQPPYPKW
Sbjct: 383 QNGGKSPFSQATQRNARNSWKQTYFDPIPMSYTELLPQLLKSHQVAIVPQEPLQPPYPKW 442

Query: 429 YDPNAKCEYHAGAVGHSTENCFPLKAKVQSLVKAGWLRFKKTGEEPDVNQNPLPNHEGPS 488
           YDPN KCEYHAG VGHSTENCFPLKAKVQSLVKAGWL+FKK  EE DVNQNPLPNHEGP+
Sbjct: 443 YDPNVKCEYHAGVVGHSTENCFPLKAKVQSLVKAGWLKFKKIEEESDVNQNPLPNHEGPA 502

Query: 489 INAVDTFMQRHKNKVSDVATSMKTLFQILHGAGYLSPRFNNDDREKIGCTNNEQCLFHPE 548
           IN VDTF +R+KNKV DV TSM TLFQIL  AGYLSPRFNND+ EK GC N +QCLFHPE
Sbjct: 503 INIVDTFTERYKNKVCDVTTSMNTLFQILRRAGYLSPRFNNDEGEKFGCANEKQCLFHPE 562

Query: 549 TNDHSIEDCCEFKNE--------------MSMQEIEVNMITNASSSEKTS 554
            +DH IEDCCEFKNE              MSMQEIEV+MI +  +S  TS
Sbjct: 563 IDDHFIEDCCEFKNEVQKLMDAKILLVGQMSMQEIEVDMIIDKETSNDTS 604

The following BLAST results are available for this feature:

BLAST of IVF0022147.2 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0022147.2 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VAU5	0.0e+00	90.19	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7V681	0.0e+00	89.97	Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5A7SUT0	0.0e+00	78.95	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold84...	[more]
A0A5A7TUT4	0.0e+00	90.94	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7ULI2	1.1e-257	78.85	Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]

BLAST of IVF0022147.2 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0065293.1	0.0	90.19	uncharacterized protein E6C27_scaffold1023G00060 [Cucumis melo var. makuwa]	[more]
KAA0061241.1	0.0	89.97	uncharacterized protein E6C27_scaffold455G00760 [Cucumis melo var. makuwa]	[more]
KAA0033221.1	0.0	79.21	uncharacterized protein E6C27_scaffold845G00100 [Cucumis melo var. makuwa]	[more]
KAA0046608.1	0.0	90.94	uncharacterized protein E6C27_scaffold114G001540 [Cucumis melo var. makuwa]	[more]
KAA0055146.1	2.90e-314	78.98	uncharacterized protein E6C27_scaffold231G00770 [Cucumis melo var. makuwa]	[more]

BLAST of IVF0022147.2 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 2..29
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 295..322
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..76
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 837..887
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 299..314
None	No IPR available	PANTHER	PTHR33240:SF7	GAG-PRO-LIKE PROTEIN	coord: 413..821
None	No IPR available	PANTHER	PTHR33240	OS08G0508500 PROTEIN	coord: 413..821
None	No IPR available	CDD	cd00303	retropepsin_like	coord: 748..820 e-value: 1.24838E-10 score: 56.9612
IPR021109	Aspartic peptidase domain superfamily	GENE3D	2.40.70.10	Acid Proteases	coord: 729..829 e-value: 6.7E-9 score: 37.5
IPR005162	Retrotransposon gag domain	PFAM	PF03732	Retrotrans_gag	coord: 993..1080 e-value: 1.5E-10 score: 41.2

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
IVF0022147	IVF0022147	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0022147.2-exon	IVF0022147.2-exon-chr01:8340883..8341519	exon
IVF0022147.2-exon	IVF0022147.2-exon-chr01:8341606..8342567	exon
IVF0022147.2-exon	IVF0022147.2-exon-chr01:8342609..8342998	exon
IVF0022147.2-exon	IVF0022147.2-exon-chr01:8343094..8343567	exon
IVF0022147.2-exon	IVF0022147.2-exon-chr01:8343900..8344733	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0022147.2-cds	IVF0022147.2-cds-chr01:8340883..8341519	CDS
IVF0022147.2-cds	IVF0022147.2-cds-chr01:8341606..8342567	CDS
IVF0022147.2-cds	IVF0022147.2-cds-chr01:8342609..8342998	CDS
IVF0022147.2-cds	IVF0022147.2-cds-chr01:8343094..8343567	CDS
IVF0022147.2-cds	IVF0022147.2-cds-chr01:8343900..8344733	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
IVF0022147.2	IVF0022147.2-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0003964	RNA-directed DNA polymerase activity