IVF0015944.2 (mRNA) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACGAAGGCAGAGGAGACATGCCTCGTCGACTTGATCATCATGGGAGGTTGGCAGTCAACAATGGGACTTTTCTATCGGGTTATTTGTCATAGTTGGTGAGAATGTTGGGAGAGAGAATGCCAGGATACAGATTGACATCCACCACTGTGATCGAAAGCATAATCAAATTACTGAAATAAACATTTCAGGCCATTGCAAAATGAGGGGACCGACGTGCAGTGACTTTGGATGGAACGATGAGAAGAAGTGCTTGATTACGGAGGACATGTTTGACAATTGA ATGGACGAAGGCAGAGGAGACATGCCTCGTCGACTTGATCATCATGGGAGGTTGGCAAATGTTGGGAGAGAGAATGCCAGGATACAGATTGACATCCACCACTGTGATCGAAAGCATAATCAAATTACTGAAATAAACATTTCAGGCCATTGCAAAATGAGGGGACCGACGTGCAGTGACTTTGGATGGAACGATGAGAAGAAGTGCTTGATTACGGAGGACATGTTTGACAATTGA ATGGACGAAGGCAGAGGAGACATGCCTCGTCGACTTGATCATCATGGGAGGTTGGCAAATGTTGGGAGAGAGAATGCCAGGATACAGATTGACATCCACCACTGTGATCGAAAGCATAATCAAATTACTGAAATAAACATTTCAGGCCATTGCAAAATGAGGGGACCGACGTGCAGTGACTTTGGATGGAACGATGAGAAGAAGTGCTTGATTACGGAGGACATGTTTGACAATTGA MDEGRGDMPRRLDHHGRLANVGRENARIQIDIHHCDRKHNQITEINISGHCKMRGPTCSDFGWNDEKKCLITEDMFDN Homology
BLAST of IVF0015944.2 vs. ExPASy TrEMBL
Match: A0A5D3C0B1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold863G001770 PE=4 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 4.5e-20 Identity = 57/88 (64.77%), Postives = 59/88 (67.05%), Query Frame = 0
BLAST of IVF0015944.2 vs. ExPASy TrEMBL
Match: A0A5D3D568 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold481G00390 PE=4 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 5.3e-05 Identity = 24/43 (55.81%), Postives = 33/43 (76.74%), Query Frame = 0
BLAST of IVF0015944.2 vs. NCBI nr
Match: KAA0061118.1 (hypothetical protein E6C27_scaffold348G00340 [Cucumis melo var. makuwa] >TYK03789.1 hypothetical protein E5676_scaffold863G001770 [Cucumis melo var. makuwa]) HSP 1 Score: 106 bits (264), Expect = 6.80e-27 Identity = 57/88 (64.77%), Postives = 59/88 (67.05%), Query Frame = 0
BLAST of IVF0015944.2 vs. NCBI nr
Match: TYK18691.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 57.4 bits (137), Expect = 1.92e-08 Identity = 24/43 (55.81%), Postives = 33/43 (76.74%), Query Frame = 0
BLAST of IVF0015944.2 vs. NCBI nr
Match: KAA0059919.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK24866.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 52.0 bits (123), Expect = 8.22e-06 Identity = 20/28 (71.43%), Postives = 26/28 (92.86%), Query Frame = 0
BLAST of IVF0015944.2 vs. NCBI nr
Match: KAA0043029.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 50.8 bits (120), Expect = 2.53e-05 Identity = 20/28 (71.43%), Postives = 25/28 (89.29%), Query Frame = 0
BLAST of IVF0015944.2 vs. NCBI nr
Match: KAA0047166.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK01162.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 50.8 bits (120), Expect = 3.21e-05 Identity = 20/28 (71.43%), Postives = 25/28 (89.29%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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