IVF0015843.1 (mRNA) Melon (IVF77) v1

Overview


Name	IVF0015843.1
Type	mRNA
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Protein of unknown function (DUF630 and DUF632)
Location	chr11: 5507088 .. 5507600 (-)
Sequence length	255
RNA-Seq Expression	IVF0015843.1
Synteny	IVF0015843.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGGAACCTACCAATATACCATCGGCAAGTGTGCCCCAGAATTTGTTACATCCTAGTCATTCCCTTCCTATCAAGGTATCTTCAATTTCTACCACAAATGAAAATATGCAAGTGGTACTGCTAGGATTTATCTTTTTGAACTTTATGATTATTATTAATATTTTCAATTTGTGAAAAATCTTTTGTTATAAGATTTTGCATCATTTTGGCCAATTTCACTTCTTCTGCAGATGGAGTTGGCGTCTATGTTTAATGAAGAACACGTTGGTTTAGTTATAGAAGCTTTATCACATAGTCAGGAATGAACATGAAAAGAAATTGTCATTGTTGCAGAGTCAGGAATACAAGGGGGAGGATGAAAGCAAGCTAGATAAGACGAAGGCTGCTATAACTAGACTGCAGTCACTAATTATTGTCACATCCCAAGCTGTCAATACAACTTCTACTGCCATAGTTGGACTAAGAAATTCGGATCTCATTCCTCAGCTTGTTGAACTTTGCCATGGGTAA

mRNA sequence

ATGGTGGAACCTACCAATATACCATCGGCAAGTGTGCCCCAGAATTTGTTACATCCTAGTCATTCCCTTCCTATCAAGAGTCAGGAATACAAGGGGGAGGATGAAAGCAAGCTAGATAAGACGAAGGCTGCTATAACTAGACTGCAGTCACTAATTATTGTCACATCCCAAGCTGTCAATACAACTTCTACTGCCATAGTTGGACTAAGAAATTCGGATCTCATTCCTCAGCTTGTTGAACTTTGCCATGGGTAA

Coding sequence (CDS)

ATGGTGGAACCTACCAATATACCATCGGCAAGTGTGCCCCAGAATTTGTTACATCCTAGTCATTCCCTTCCTATCAAGAGTCAGGAATACAAGGGGGAGGATGAAAGCAAGCTAGATAAGACGAAGGCTGCTATAACTAGACTGCAGTCACTAATTATTGTCACATCCCAAGCTGTCAATACAACTTCTACTGCCATAGTTGGACTAAGAAATTCGGATCTCATTCCTCAGCTTGTTGAACTTTGCCATGGGTAA

Protein sequence

MVEPTNIPSASVPQNLLHPSHSLPIKSQEYKGEDESKLDKTKAAITRLQSLIIVTSQAVNTTSTAIVGLRNSDLIPQLVELCHG

Homology

[Close]

BLAST of IVF0015843.1 vs. ExPASy Swiss-Prot
Match: Q93YU8 (Nitrate regulatory gene2 protein OS=Arabidopsis thaliana OX=3702 GN=NRG2 PE=1 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 7.2e-21
Identity = 51/67 (76.12%), Postives = 59/67 (88.06%), Query Frame = 0


Query: 18  HPSHSLPIKSQEYKGEDESKLDKTKAAITRLQSLIIVTSQAVNTTSTAIVGLRNSDLIPQ 77
           H      ++SQEYKGEDE+KLDKTKA+ITRLQSLIIVTSQAV TTSTAI+ LR++DL+PQ
Sbjct: 468 HEKKLSQLQSQEYKGEDEAKLDKTKASITRLQSLIIVTSQAVTTTSTAIIRLRDTDLVPQ 527

Query: 78  LVELCHG 85
           LVELCHG
Sbjct: 528 LVELCHG 534

[Close]

BLAST of IVF0015843.1 vs. ExPASy Swiss-Prot
Match: Q9AQW1 (Protein ROLLING AND ERECT LEAF 2 OS=Oryza sativa subsp. japonica OX=39947 GN=REL2 PE=2 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 8.5e-14
Identity = 40/65 (61.54%), Postives = 51/65 (78.46%), Query Frame = 0


Query: 18  HPSHSLPIKSQEYKGEDESKLDKTKAAITRLQSLIIVTSQAVNTTSTAIVGLRNSDLIPQ 77
           H      ++S EY+G D +KLDKTKA+I +LQSLIIVTSQA  TTS+AIV +R+++L PQ
Sbjct: 436 HEKKLSTLQSLEYRGRDSTKLDKTKASINKLQSLIIVTSQAATTTSSAIVRVRDNELAPQ 495

Query: 78  LVELC 83
           LVELC
Sbjct: 496 LVELC 500

[Close]

BLAST of IVF0015843.1 vs. ExPASy Swiss-Prot
Match: A0A178VBJ0 (Protein ALTERED PHOSPHATE STARVATION RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=APSR1 PE=2 SV=1)

HSP 1 Score: 44.7 bits (104), Expect = 6.1e-04
Identity = 23/60 (38.33%), Postives = 37/60 (61.67%), Query Frame = 0


Query: 25  IKSQEYKGEDESKLDKTKAAITRLQSLIIVTSQAVNTTSTAIVGLRNSDLIPQLVELCHG 84
           ++  E K  +  K +K K  + +L+S + V+SQA+ + S  I+ LR ++L PQLVEL  G
Sbjct: 324 VRRLEMKRAEYVKTEKAKKDVEKLESQLSVSSQAIQSASNEIIKLRETELYPQLVELVKG 383

[Close]

BLAST of IVF0015843.1 vs. ExPASy TrEMBL
Match: A0A5A7TND8 (BZIP protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G004480 PE=4 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 6.8e-22
Identity = 58/60 (96.67%), Postives = 60/60 (100.00%), Query Frame = 0


Query: 25  IKSQEYKGEDESKLDKTKAAITRLQSLIIVTSQAVNTTSTAIVGLRNSDLIPQLVELCHG 84
           ++SQEYKGEDESKLDKTKAAITRLQSLIIVTSQAVNTTSTAIVGLRNSDLIPQLVELCHG
Sbjct: 55  LQSQEYKGEDESKLDKTKAAITRLQSLIIVTSQAVNTTSTAIVGLRNSDLIPQLVELCHG 114

[Close]

BLAST of IVF0015843.1 vs. ExPASy TrEMBL
Match: A0A5A7TM53 (Histone-lysine N-methyltransferase SETD2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2741G00230 PE=4 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 6.8e-22
Identity = 58/60 (96.67%), Postives = 60/60 (100.00%), Query Frame = 0


Query: 25  IKSQEYKGEDESKLDKTKAAITRLQSLIIVTSQAVNTTSTAIVGLRNSDLIPQLVELCHG 84
           ++SQEYKGEDESKLDKTKAAITRLQSLIIVTSQAVNTTSTAIVGLRNSDLIPQLVELCHG
Sbjct: 55  LQSQEYKGEDESKLDKTKAAITRLQSLIIVTSQAVNTTSTAIVGLRNSDLIPQLVELCHG 114

[Close]

BLAST of IVF0015843.1 vs. ExPASy TrEMBL
Match: A0A5A7T945 (DUF632 domain-containing protein/DUF630 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G00480 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 8.8e-22
Identity = 59/67 (88.06%), Postives = 61/67 (91.04%), Query Frame = 0


Query: 18  HPSHSLPIKSQEYKGEDESKLDKTKAAITRLQSLIIVTSQAVNTTSTAIVGLRNSDLIPQ 77
           H      ++SQEYKGEDESKLDKTKAAITRLQSLIIVTSQAVNTTSTAIVGLRNSDLIPQ
Sbjct: 487 HEKKLSSLQSQEYKGEDESKLDKTKAAITRLQSLIIVTSQAVNTTSTAIVGLRNSDLIPQ 546

Query: 78  LVELCHG 85
           LVELCHG
Sbjct: 547 LVELCHG 553

[Close]

BLAST of IVF0015843.1 vs. ExPASy TrEMBL
Match: A0A5D3DM51 (Putative helicase CHR10 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002740 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 8.8e-22
Identity = 59/67 (88.06%), Postives = 61/67 (91.04%), Query Frame = 0


Query: 18  HPSHSLPIKSQEYKGEDESKLDKTKAAITRLQSLIIVTSQAVNTTSTAIVGLRNSDLIPQ 77
           H      ++SQEYKGEDESKLDKTKAAITRLQSLIIVTSQAVNTTSTAIVGLRNSDLIPQ
Sbjct: 485 HEKKLSSLQSQEYKGEDESKLDKTKAAITRLQSLIIVTSQAVNTTSTAIVGLRNSDLIPQ 544

Query: 78  LVELCHG 85
           LVELCHG
Sbjct: 545 LVELCHG 551

[Close]

BLAST of IVF0015843.1 vs. ExPASy TrEMBL
Match: A0A1S3CBF7 (uncharacterized protein LOC103498813 OS=Cucumis melo OX=3656 GN=LOC103498813 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 8.8e-22
Identity = 59/67 (88.06%), Postives = 61/67 (91.04%), Query Frame = 0


Query: 18  HPSHSLPIKSQEYKGEDESKLDKTKAAITRLQSLIIVTSQAVNTTSTAIVGLRNSDLIPQ 77
           H      ++SQEYKGEDESKLDKTKAAITRLQSLIIVTSQAVNTTSTAIVGLRNSDLIPQ
Sbjct: 487 HEKKLSSLQSQEYKGEDESKLDKTKAAITRLQSLIIVTSQAVNTTSTAIVGLRNSDLIPQ 546

Query: 78  LVELCHG 85
           LVELCHG
Sbjct: 547 LVELCHG 553

[Close]

BLAST of IVF0015843.1 vs. NCBI nr
Match: KAA0044264.1 (histone-lysine N-methyltransferase SETD2-like [Cucumis melo var. makuwa])

HSP 1 Score: 114 bits (284), Expect = 5.39e-30
Identity = 58/60 (96.67%), Postives = 60/60 (100.00%), Query Frame = 0


Query: 25  IKSQEYKGEDESKLDKTKAAITRLQSLIIVTSQAVNTTSTAIVGLRNSDLIPQLVELCHG 84
           ++SQEYKGEDESKLDKTKAAITRLQSLIIVTSQAVNTTSTAIVGLRNSDLIPQLVELCHG
Sbjct: 55  LQSQEYKGEDESKLDKTKAAITRLQSLIIVTSQAVNTTSTAIVGLRNSDLIPQLVELCHG 114

[Close]

BLAST of IVF0015843.1 vs. NCBI nr
Match: KAA0042925.1 (bZIP protein [Cucumis melo var. makuwa])

HSP 1 Score: 114 bits (284), Expect = 6.20e-30
Identity = 58/60 (96.67%), Postives = 60/60 (100.00%), Query Frame = 0


Query: 25  IKSQEYKGEDESKLDKTKAAITRLQSLIIVTSQAVNTTSTAIVGLRNSDLIPQLVELCHG 84
           ++SQEYKGEDESKLDKTKAAITRLQSLIIVTSQAVNTTSTAIVGLRNSDLIPQLVELCHG
Sbjct: 55  LQSQEYKGEDESKLDKTKAAITRLQSLIIVTSQAVNTTSTAIVGLRNSDLIPQLVELCHG 114

[Close]

BLAST of IVF0015843.1 vs. NCBI nr
Match: TYK05325.1 (bZIP protein [Cucumis melo var. makuwa])

HSP 1 Score: 111 bits (278), Expect = 5.03e-29
Identity = 57/60 (95.00%), Postives = 59/60 (98.33%), Query Frame = 0


Query: 25  IKSQEYKGEDESKLDKTKAAITRLQSLIIVTSQAVNTTSTAIVGLRNSDLIPQLVELCHG 84
           ++SQEYKGEDESKLDK KAAITRLQSLIIVTSQAVNTTSTAIVGLRNSDLIPQLVELCHG
Sbjct: 55  LQSQEYKGEDESKLDKMKAAITRLQSLIIVTSQAVNTTSTAIVGLRNSDLIPQLVELCHG 114

[Close]

BLAST of IVF0015843.1 vs. NCBI nr
Match: KAA0047058.1 (protein DETOXIFICATION 31-like [Cucumis melo var. makuwa])

HSP 1 Score: 112 bits (279), Expect = 7.35e-29
Identity = 57/60 (95.00%), Postives = 60/60 (100.00%), Query Frame = 0


Query: 25  IKSQEYKGEDESKLDKTKAAITRLQSLIIVTSQAVNTTSTAIVGLRNSDLIPQLVELCHG 84
           ++SQEYKGE+ESKLDKTKAAITRLQSLIIVTSQAVNTTSTAIVGLRNSDLIPQLVELCHG
Sbjct: 129 LQSQEYKGENESKLDKTKAAITRLQSLIIVTSQAVNTTSTAIVGLRNSDLIPQLVELCHG 188

[Close]

BLAST of IVF0015843.1 vs. NCBI nr
Match: XP_008459782.1 (PREDICTED: uncharacterized protein LOC103498813 [Cucumis melo])

HSP 1 Score: 114 bits (284), Expect = 4.27e-27
Identity = 58/60 (96.67%), Postives = 60/60 (100.00%), Query Frame = 0


Query: 25  IKSQEYKGEDESKLDKTKAAITRLQSLIIVTSQAVNTTSTAIVGLRNSDLIPQLVELCHG 84
           ++SQEYKGEDESKLDKTKAAITRLQSLIIVTSQAVNTTSTAIVGLRNSDLIPQLVELCHG
Sbjct: 494 LQSQEYKGEDESKLDKTKAAITRLQSLIIVTSQAVNTTSTAIVGLRNSDLIPQLVELCHG 553

[Close]

BLAST of IVF0015843.1 vs. TAIR 10
Match: AT3G60320.1 (Protein of unknown function (DUF630 and DUF632) )

HSP 1 Score: 100.9 bits (250), Expect = 5.1e-22
Identity = 51/67 (76.12%), Postives = 59/67 (88.06%), Query Frame = 0


Query: 18  HPSHSLPIKSQEYKGEDESKLDKTKAAITRLQSLIIVTSQAVNTTSTAIVGLRNSDLIPQ 77
           H      ++SQEYKGEDE+KLDKTKA+ITRLQSLIIVTSQAV TTSTAI+ LR++DL+PQ
Sbjct: 468 HEKKLSQLQSQEYKGEDEAKLDKTKASITRLQSLIIVTSQAVTTTSTAIIRLRDTDLVPQ 527

Query: 78  LVELCHG 85
           LVELCHG
Sbjct: 528 LVELCHG 534

[Close]

BLAST of IVF0015843.1 vs. TAIR 10
Match: AT1G02110.1 (Protein of unknown function (DUF630 and DUF632) )

HSP 1 Score: 91.3 bits (225), Expect = 4.1e-19
Identity = 47/67 (70.15%), Postives = 56/67 (83.58%), Query Frame = 0


Query: 18  HPSHSLPIKSQEYKGEDESKLDKTKAAITRLQSLIIVTSQAVNTTSTAIVGLRNSDLIPQ 77
           H      ++SQEYKG DESKLDKTK +ITRLQSLIIV+S+AV TTS AI+ LR++DL+PQ
Sbjct: 384 HEKKLSALQSQEYKGGDESKLDKTKTSITRLQSLIIVSSEAVLTTSNAILRLRDTDLVPQ 443

Query: 78  LVELCHG 85
           LVELCHG
Sbjct: 444 LVELCHG 450

[Close]

BLAST of IVF0015843.1 vs. TAIR 10
Match: AT4G30130.1 (Protein of unknown function (DUF630 and DUF632) )

HSP 1 Score: 48.1 bits (113), Expect = 3.9e-06
Identity = 25/62 (40.32%), Postives = 40/62 (64.52%), Query Frame = 0


Query: 23  LPIKSQEYKGEDESKLDKTKAAITRLQSLIIVTSQAVNTTSTAIVGLRNSDLIPQLVELC 82
           L +++Q+ KG D S +DKT+A I  L + I V+  ++ + S  I  LR+ +L+PQL+EL 
Sbjct: 432 LVLRNQDVKGADSSAVDKTRATIRDLHTQIKVSIHSIESISERIETLRDQELLPQLLELV 491

Query: 83  HG 85
            G
Sbjct: 492 QG 493

[Close]

BLAST of IVF0015843.1 vs. TAIR 10
Match: AT2G19090.1 (Protein of unknown function (DUF630 and DUF632) )

HSP 1 Score: 46.2 bits (108), Expect = 1.5e-05
Identity = 23/62 (37.10%), Postives = 40/62 (64.52%), Query Frame = 0


Query: 23  LPIKSQEYKGEDESKLDKTKAAITRLQSLIIVTSQAVNTTSTAIVGLRNSDLIPQLVELC 82
           + +++Q+ KG+D   +DKT+A I  L + I V+  ++ + S  I  LR+ +L+PQL+EL 
Sbjct: 513 MQLRNQDVKGDDPLAVDKTRATIRDLDTQIKVSIHSIESISKRIETLRDQELLPQLLELV 572

Query: 83  HG 85
            G
Sbjct: 573 EG 574

[Close]

BLAST of IVF0015843.1 vs. TAIR 10
Match: AT3G51290.1 (Protein of unknown function (DUF630) ;Protein of unknown function (DUF632) )

HSP 1 Score: 44.7 bits (104), Expect = 4.3e-05
Identity = 23/60 (38.33%), Postives = 37/60 (61.67%), Query Frame = 0


Query: 25  IKSQEYKGEDESKLDKTKAAITRLQSLIIVTSQAVNTTSTAIVGLRNSDLIPQLVELCHG 84
           ++  E K  +  K +K K  + +L+S + V+SQA+ + S  I+ LR ++L PQLVEL  G
Sbjct: 324 VRRLEMKRAEYVKTEKAKKDVEKLESQLSVSSQAIQSASNEIIKLRETELYPQLVELVKG 383

The following BLAST results are available for this feature:

BLAST of IVF0015843.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93YU8	7.2e-21	76.12	Nitrate regulatory gene2 protein OS=Arabidopsis thaliana OX=3702 GN=NRG2 PE=1 SV...	[more]
Q9AQW1	8.5e-14	61.54	Protein ROLLING AND ERECT LEAF 2 OS=Oryza sativa subsp. japonica OX=39947 GN=REL...	[more]
A0A178VBJ0	6.1e-04	38.33	Protein ALTERED PHOSPHATE STARVATION RESPONSE 1 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of IVF0015843.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TND8	6.8e-22	96.67	BZIP protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G004480 P...	[more]
A0A5A7TM53	6.8e-22	96.67	Histone-lysine N-methyltransferase SETD2-like OS=Cucumis melo var. makuwa OX=119...	[more]
A0A5A7T945	8.8e-22	88.06	DUF632 domain-containing protein/DUF630 domain-containing protein OS=Cucumis mel...	[more]
A0A5D3DM51	8.8e-22	88.06	Putative helicase CHR10 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3CBF7	8.8e-22	88.06	uncharacterized protein LOC103498813 OS=Cucumis melo OX=3656 GN=LOC103498813 PE=...	[more]

BLAST of IVF0015843.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0044264.1	5.39e-30	96.67	histone-lysine N-methyltransferase SETD2-like [Cucumis melo var. makuwa]	[more]
KAA0042925.1	6.20e-30	96.67	bZIP protein [Cucumis melo var. makuwa]	[more]
TYK05325.1	5.03e-29	95.00	bZIP protein [Cucumis melo var. makuwa]	[more]
KAA0047058.1	7.35e-29	95.00	protein DETOXIFICATION 31-like [Cucumis melo var. makuwa]	[more]
XP_008459782.1	4.27e-27	96.67	PREDICTED: uncharacterized protein LOC103498813 [Cucumis melo]	[more]

BLAST of IVF0015843.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G60320.1	5.1e-22	76.12	Protein of unknown function (DUF630 and DUF632)	[more]
AT1G02110.1	4.1e-19	70.15	Protein of unknown function (DUF630 and DUF632)	[more]
AT4G30130.1	3.9e-06	40.32	Protein of unknown function (DUF630 and DUF632)	[more]
AT2G19090.1	1.5e-05	37.10	Protein of unknown function (DUF630 and DUF632)	[more]
AT3G51290.1	4.3e-05	38.33	Protein of unknown function (DUF630) ;Protein of unknown function (DUF632)	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006867	Domain of unknown function DUF632	PFAM	PF04782	DUF632	coord: 25..84 e-value: 5.2E-17 score: 62.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	PANTHER	PTHR21450	UNCHARACTERIZED	coord: 25..84
None	No IPR available	PANTHER	PTHR21450:SF9	BZIP DOMAIN CLASS TRANSCRIPTION FACTOR (DUF630 AND DUF632)-RELATED	coord: 25..84

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
IVF0015843	IVF0015843	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0015843.1-exon	IVF0015843.1-exon-chr11:5507088..5507264	exon
IVF0015843.1-exon	IVF0015843.1-exon-chr11:5507523..5507600	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0015843.1-cds	IVF0015843.1-cds-chr11:5507088..5507264	CDS
IVF0015843.1-cds	IVF0015843.1-cds-chr11:5507523..5507600	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
IVF0015843.1	IVF0015843.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032259	methylation
biological_process	GO:0055085	transmembrane transport
biological_process	GO:0042908	xenobiotic transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0015297	antiporter activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0042910	xenobiotic transmembrane transporter activity