IVF0014830.1 (mRNA) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCACCTCCTCAAGCACCACCTATGGTAATTAACCACAATGATAACCAAGATGAGGGTGATGGTTCTGATGGCTTAGACGATGACCAAGTTACATTATTGGAGGAGTCGAGACGTGAGGGACATGAAGTAGTTAGAAGAAAAGGTCGTGGGAGAGCTTATCAAAATATCCAAAGGAGAGCTCAACAAGAAGCACCTCAATTTGAGCGTAACATAGAAGCCATCAAATTTAAAATTTCCAAGTTCTTCGGGAAAACTGATCCAGAGGAGTACATTCAGTGGGAAAAAGAGGTGGAGAATGTGTTTGCTTGCCATAATTTTACTAACGAGCAGAAGGTTAGATTTTGTGTTTTCAAATTTAAGGATTATGCTCAAACTAGGTGA ATGCCACCTCCTCAAGCACCACCTATGGTAATTAACCACAATGATAACCAAGATGAGGGTGATGGTTCTGATGGCTTAGACGATGACCAAGTTACATTATTGGAGGAGTCGAGACGTGAGGGACATGAAGTAGTTAGAAGAAAAGGTCGTGGGAGAGCTTATCAAAATATCCAAAGGAGAGCTCAACAAGAAGCACCTCAATTTGAGCGTAACATAGAAGCCATCAAATTTAAAATTTCCAAGTTCTTCGGGAAAACTGATCCAGAGGAGTACATTCAGTGGGAAAAAGAGGTGGAGAATGTGTTTGCTTGCCATAATTTTACTAACGAGCAGAAGGTTAGATTTTGTGTTTTCAAATTTAAGGATTATGCTCAAACTAGGTGA ATGCCACCTCCTCAAGCACCACCTATGGTAATTAACCACAATGATAACCAAGATGAGGGTGATGGTTCTGATGGCTTAGACGATGACCAAGTTACATTATTGGAGGAGTCGAGACGTGAGGGACATGAAGTAGTTAGAAGAAAAGGTCGTGGGAGAGCTTATCAAAATATCCAAAGGAGAGCTCAACAAGAAGCACCTCAATTTGAGCGTAACATAGAAGCCATCAAATTTAAAATTTCCAAGTTCTTCGGGAAAACTGATCCAGAGGAGTACATTCAGTGGGAAAAAGAGGTGGAGAATGTGTTTGCTTGCCATAATTTTACTAACGAGCAGAAGGTTAGATTTTGTGTTTTCAAATTTAAGGATTATGCTCAAACTAGGTGA MPPPQAPPMVINHNDNQDEGDGSDGLDDDQVTLLEESRREGHEVVRRKGRGRAYQNIQRRAQQEAPQFERNIEAIKFKISKFFGKTDPEEYIQWEKEVENVFACHNFTNEQKVRFCVFKFKDYAQTR Homology
BLAST of IVF0014830.1 vs. ExPASy TrEMBL
Match: A0A5A7T993 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G001470 PE=4 SV=1) HSP 1 Score: 259.2 bits (661), Expect = 8.8e-66 Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0
BLAST of IVF0014830.1 vs. ExPASy TrEMBL
Match: A0A5D3CHG3 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold447G001250 PE=4 SV=1) HSP 1 Score: 208.8 bits (530), Expect = 1.4e-50 Identity = 105/126 (83.33%), Postives = 111/126 (88.10%), Query Frame = 0
BLAST of IVF0014830.1 vs. ExPASy TrEMBL
Match: A0A5A7TK52 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold320G001000 PE=4 SV=1) HSP 1 Score: 208.8 bits (530), Expect = 1.4e-50 Identity = 105/126 (83.33%), Postives = 111/126 (88.10%), Query Frame = 0
BLAST of IVF0014830.1 vs. ExPASy TrEMBL
Match: A0A5A7TYI0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold829G00200 PE=4 SV=1) HSP 1 Score: 206.8 bits (525), Expect = 5.2e-50 Identity = 103/126 (81.75%), Postives = 108/126 (85.71%), Query Frame = 0
BLAST of IVF0014830.1 vs. ExPASy TrEMBL
Match: A0A5D3CFQ1 (CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold315G00990 PE=4 SV=1) HSP 1 Score: 145.2 bits (365), Expect = 1.9e-31 Identity = 71/86 (82.56%), Postives = 76/86 (88.37%), Query Frame = 0
BLAST of IVF0014830.1 vs. NCBI nr
Match: KAA0038045.1 (uncharacterized protein E6C27_scaffold36G002470 [Cucumis melo var. makuwa] >TYK20558.1 uncharacterized protein E5676_scaffold237G001470 [Cucumis melo var. makuwa]) HSP 1 Score: 260 bits (664), Expect = 1.96e-85 Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0
BLAST of IVF0014830.1 vs. NCBI nr
Match: TYK09709.1 (uncharacterized protein E5676_scaffold447G001250 [Cucumis melo var. makuwa]) HSP 1 Score: 209 bits (533), Expect = 3.09e-66 Identity = 105/126 (83.33%), Postives = 111/126 (88.10%), Query Frame = 0
BLAST of IVF0014830.1 vs. NCBI nr
Match: KAA0047036.1 (uncharacterized protein E6C27_scaffold829G00200 [Cucumis melo var. makuwa]) HSP 1 Score: 207 bits (528), Expect = 3.21e-66 Identity = 103/126 (81.75%), Postives = 108/126 (85.71%), Query Frame = 0
BLAST of IVF0014830.1 vs. NCBI nr
Match: KAA0043652.1 (uncharacterized protein E6C27_scaffold320G001000 [Cucumis melo var. makuwa]) HSP 1 Score: 209 bits (533), Expect = 5.83e-66 Identity = 105/126 (83.33%), Postives = 111/126 (88.10%), Query Frame = 0
BLAST of IVF0014830.1 vs. NCBI nr
Match: KAA0040916.1 (uncharacterized protein E6C27_scaffold125G00290 [Cucumis melo var. makuwa]) HSP 1 Score: 145 bits (365), Expect = 4.26e-41 Identity = 71/86 (82.56%), Postives = 76/86 (88.37%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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