Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTATTTACAGAACTTGGAATCAAGGATGATTTGAAGGATGAAACGTATTTAGCTGCCTTCTTATCTTGCTGGTTGTGCCTTTTCGTATTTTCTCAGAAAGGATCGTTTCTTCGTCCTGGAGTATTTAGGGCTGCAAGCCTAATGGCCGCTGGCACTATTTATAGTCTTGCAGTTCCAGTTTTGGCGAACATATACCATGGGCTAGGTTTGATAACCAAAGCCTCCAATCTGATAGGACGCATGAACTTTCACTTTCCCATGCATTACGTCCATGGATGGTTAGCCCATTATTTTGGCACACATTATCCACTTCCCACAGAAGTTCGAGGTCCGAAGATGACTAAATTTTCAGGCGAAGGTGGGTCTATTTATTTTGGCAAATATGAGGCACGCGAATTGATCCATAATGGTGCAAGAATTTAG
mRNA sequence
ATGTTATTTACAGAACTTGGAATCAAGGATGATTTGAAGGATGAAACGTATTTAGCTGCCTTCTTATCTTGCTGGTTGTGCCTTTTCGTATTTTCTCAGAAAGGATCGTTTCTTCGTCCTGGAGTATTTAGGGCTGCAAGCCTAATGGCCGCTGGCACTATTTATAGTCTTGCAGTTCCAGTTTTGGCGAACATATACCATGGGCTAGGTTTGATAACCAAAGCCTCCAATCTGATAGGACGCATGAACTTTCACTTTCCCATGCATTACGTCCATGGATGGTTAGCCCATTATTTTGGCACACATTATCCACTTCCCACAGAAGTTCGAGGTCCGAAGATGACTAAATTTTCAGGCGAAGGTGGGTCTATTTATTTTGGCAAATATGAGGCACGCGAATTGATCCATAATGGTGCAAGAATTTAG
Coding sequence (CDS)
ATGTTATTTACAGAACTTGGAATCAAGGATGATTTGAAGGATGAAACGTATTTAGCTGCCTTCTTATCTTGCTGGTTGTGCCTTTTCGTATTTTCTCAGAAAGGATCGTTTCTTCGTCCTGGAGTATTTAGGGCTGCAAGCCTAATGGCCGCTGGCACTATTTATAGTCTTGCAGTTCCAGTTTTGGCGAACATATACCATGGGCTAGGTTTGATAACCAAAGCCTCCAATCTGATAGGACGCATGAACTTTCACTTTCCCATGCATTACGTCCATGGATGGTTAGCCCATTATTTTGGCACACATTATCCACTTCCCACAGAAGTTCGAGGTCCGAAGATGACTAAATTTTCAGGCGAAGGTGGGTCTATTTATTTTGGCAAATATGAGGCACGCGAATTGATCCATAATGGTGCAAGAATTTAG
Protein sequence
MLFTELGIKDDLKDETYLAAFLSCWLCLFVFSQKGSFLRPGVFRAASLMAAGTIYSLAVPVLANIYHGLGLITKASNLIGRMNFHFPMHYVHGWLAHYFGTHYPLPTEVRGPKMTKFSGEGGSIYFGKYEARELIHNGARI
Homology
BLAST of IVF0014700.1 vs. ExPASy TrEMBL
Match:
A0A5A7SHN8 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1204G00400 PE=4 SV=1)
HSP 1 Score: 278.9 bits (712), Expect = 1.2e-71
Identity = 133/141 (94.33%), Postives = 136/141 (96.45%), Query Frame = 0
Query: 1 MLFTELGIKDDLKDETYLAAFLSCWLCLFVFSQKGSFLRPGVFRAASLMAAGTIYSLAVP 60
MLF ELGIKDDLKDETYLAAFLSCWLCLF+F QKGSFLRPGVFRAASLMAA TIYSLAVP
Sbjct: 272 MLFAELGIKDDLKDETYLAAFLSCWLCLFIFPQKGSFLRPGVFRAASLMAACTIYSLAVP 331
Query: 61 VLANIYHGLGLITKASNLIGRMNFHFPMHYVHGWLAHYFGTHYPLPTEVRGPKMTKFSGE 120
VLANIYHGLGLITKASN IGRM+FHFPMHYVHGWLAHYFGTHYPLPTEVRGPKMT FSGE
Sbjct: 332 VLANIYHGLGLITKASNPIGRMDFHFPMHYVHGWLAHYFGTHYPLPTEVRGPKMTNFSGE 391
Query: 121 GGSIYFGKYEARELIHNGARI 142
GGSIYFG+YEARELIHNGARI
Sbjct: 392 GGSIYFGEYEARELIHNGARI 412
BLAST of IVF0014700.1 vs. ExPASy TrEMBL
Match:
A0A5A7VHW8 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold17G00370 PE=4 SV=1)
HSP 1 Score: 277.7 bits (709), Expect = 2.7e-71
Identity = 132/141 (93.62%), Postives = 135/141 (95.74%), Query Frame = 0
Query: 1 MLFTELGIKDDLKDETYLAAFLSCWLCLFVFSQKGSFLRPGVFRAASLMAAGTIYSLAVP 60
MLF ELGIKDDLKDETYLAAFLSCWLCLFVF QKGSFLRPGVFRAASLM AGTIYSLAVP
Sbjct: 300 MLFAELGIKDDLKDETYLAAFLSCWLCLFVFPQKGSFLRPGVFRAASLMTAGTIYSLAVP 359
Query: 61 VLANIYHGLGLITKASNLIGRMNFHFPMHYVHGWLAHYFGTHYPLPTEVRGPKMTKFSGE 120
VLANIYHGLGLITKASN GRM+FHFPMHYVHGWLAHYFGTHYPLPTEVRGPKMT FSGE
Sbjct: 360 VLANIYHGLGLITKASNPTGRMDFHFPMHYVHGWLAHYFGTHYPLPTEVRGPKMTNFSGE 419
Query: 121 GGSIYFGKYEARELIHNGARI 142
GGSIYFG+YEAR+LIHNGARI
Sbjct: 420 GGSIYFGEYEARKLIHNGARI 440
BLAST of IVF0014700.1 vs. ExPASy TrEMBL
Match:
A0A5A7TZZ9 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2963G00230 PE=4 SV=1)
HSP 1 Score: 276.6 bits (706), Expect = 5.9e-71
Identity = 133/141 (94.33%), Postives = 135/141 (95.74%), Query Frame = 0
Query: 1 MLFTELGIKDDLKDETYLAAFLSCWLCLFVFSQKGSFLRPGVFRAASLMAAGTIYSLAVP 60
MLF ELGIKDDLKDETYLAAFLSCWLCLFVF QKGSFLRPGVFRAASLMAA TIYSLAVP
Sbjct: 225 MLFAELGIKDDLKDETYLAAFLSCWLCLFVFPQKGSFLRPGVFRAASLMAADTIYSLAVP 284
Query: 61 VLANIYHGLGLITKASNLIGRMNFHFPMHYVHGWLAHYFGTHYPLPTEVRGPKMTKFSGE 120
VLANIYHGLGLITKASN IGRM+FHFPMHYVHGWLAHYFGTHYPLPTEVRGPKMT FSGE
Sbjct: 285 VLANIYHGLGLITKASNPIGRMDFHFPMHYVHGWLAHYFGTHYPLPTEVRGPKMTNFSGE 344
Query: 121 GGSIYFGKYEARELIHNGARI 142
GGSIYFG+YEARELIHN ARI
Sbjct: 345 GGSIYFGEYEARELIHNCARI 365
BLAST of IVF0014700.1 vs. ExPASy TrEMBL
Match:
A0A5D3C543 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold157G00620 PE=4 SV=1)
HSP 1 Score: 276.6 bits (706), Expect = 5.9e-71
Identity = 133/141 (94.33%), Postives = 135/141 (95.74%), Query Frame = 0
Query: 1 MLFTELGIKDDLKDETYLAAFLSCWLCLFVFSQKGSFLRPGVFRAASLMAAGTIYSLAVP 60
MLF ELGIKDDLKDETYLAAFLSCWLCLFVF QKGSFLRPGVFRAASLMAA TIYSLAVP
Sbjct: 255 MLFAELGIKDDLKDETYLAAFLSCWLCLFVFPQKGSFLRPGVFRAASLMAADTIYSLAVP 314
Query: 61 VLANIYHGLGLITKASNLIGRMNFHFPMHYVHGWLAHYFGTHYPLPTEVRGPKMTKFSGE 120
VLANIYHGLGLITKASN IGRM+FHFPMHYVHGWLAHYFGTHYPLPTEVRGPKMT FSGE
Sbjct: 315 VLANIYHGLGLITKASNPIGRMDFHFPMHYVHGWLAHYFGTHYPLPTEVRGPKMTNFSGE 374
Query: 121 GGSIYFGKYEARELIHNGARI 142
GGSIYFG+YEARELIHN ARI
Sbjct: 375 GGSIYFGEYEARELIHNCARI 395
BLAST of IVF0014700.1 vs. ExPASy TrEMBL
Match:
A0A5D3DCE5 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold18270G00010 PE=4 SV=1)
HSP 1 Score: 276.2 bits (705), Expect = 7.7e-71
Identity = 132/141 (93.62%), Postives = 135/141 (95.74%), Query Frame = 0
Query: 1 MLFTELGIKDDLKDETYLAAFLSCWLCLFVFSQKGSFLRPGVFRAASLMAAGTIYSLAVP 60
MLF ELGI+DDLKDETYLAAFLSCWLCLFVF QKGSFLRPGVFR ASLMAAGTIYSLAVP
Sbjct: 267 MLFAELGIRDDLKDETYLAAFLSCWLCLFVFPQKGSFLRPGVFRVASLMAAGTIYSLAVP 326
Query: 61 VLANIYHGLGLITKASNLIGRMNFHFPMHYVHGWLAHYFGTHYPLPTEVRGPKMTKFSGE 120
VLANIYHGLGLITKASN IGRM+FHFPMHYVHGWLA+YFGTHYPLPTEVR PKMT FSGE
Sbjct: 327 VLANIYHGLGLITKASNPIGRMDFHFPMHYVHGWLAYYFGTHYPLPTEVRRPKMTNFSGE 386
Query: 121 GGSIYFGKYEARELIHNGARI 142
GGSIYFGKYEARELIHNGARI
Sbjct: 387 GGSIYFGKYEARELIHNGARI 407
BLAST of IVF0014700.1 vs. NCBI nr
Match:
TYK20969.1 (hypothetical protein E5676_scaffold18270G00010 [Cucumis melo var. makuwa])
HSP 1 Score: 275 bits (704), Expect = 2.28e-89
Identity = 132/141 (93.62%), Postives = 135/141 (95.74%), Query Frame = 0
Query: 1 MLFTELGIKDDLKDETYLAAFLSCWLCLFVFSQKGSFLRPGVFRAASLMAAGTIYSLAVP 60
MLF ELGI+DDLKDETYLAAFLSCWLCLFVF QKGSFLRPGVFR ASLMAAGTIYSLAVP
Sbjct: 267 MLFAELGIRDDLKDETYLAAFLSCWLCLFVFPQKGSFLRPGVFRVASLMAAGTIYSLAVP 326
Query: 61 VLANIYHGLGLITKASNLIGRMNFHFPMHYVHGWLAHYFGTHYPLPTEVRGPKMTKFSGE 120
VLANIYHGLGLITKASN IGRM+FHFPMHYVHGWLA+YFGTHYPLPTEVR PKMT FSGE
Sbjct: 327 VLANIYHGLGLITKASNPIGRMDFHFPMHYVHGWLAYYFGTHYPLPTEVRRPKMTNFSGE 386
Query: 121 GGSIYFGKYEARELIHNGARI 141
GGSIYFGKYEARELIHNGARI
Sbjct: 387 GGSIYFGKYEARELIHNGARI 407
BLAST of IVF0014700.1 vs. NCBI nr
Match:
KAA0031751.1 (hypothetical protein E6C27_scaffold506G00140 [Cucumis melo var. makuwa])
HSP 1 Score: 275 bits (702), Expect = 1.81e-86
Identity = 131/141 (92.91%), Postives = 134/141 (95.04%), Query Frame = 0
Query: 1 MLFTELGIKDDLKDETYLAAFLSCWLCLFVFSQKGSFLRPGVFRAASLMAAGTIYSLAVP 60
MLF ELGI+DDLKDETYLAAFLSCWLCLFVF QKGSFLRPGVFR SLMAAGTIYSLAVP
Sbjct: 1 MLFAELGIRDDLKDETYLAAFLSCWLCLFVFPQKGSFLRPGVFRVVSLMAAGTIYSLAVP 60
Query: 61 VLANIYHGLGLITKASNLIGRMNFHFPMHYVHGWLAHYFGTHYPLPTEVRGPKMTKFSGE 120
VLANIYHGLGLITKASN IGRM+FHFPMHYVHGWLAHYFGTHYPLPTEVRGPKMT FSGE
Sbjct: 61 VLANIYHGLGLITKASNPIGRMDFHFPMHYVHGWLAHYFGTHYPLPTEVRGPKMTNFSGE 120
Query: 121 GGSIYFGKYEARELIHNGARI 141
G SIYFG+YEARELIHNGARI
Sbjct: 121 GESIYFGEYEARELIHNGARI 141
BLAST of IVF0014700.1 vs. NCBI nr
Match:
KAA0057575.1 (hypothetical protein E6C27_scaffold497G00470 [Cucumis melo var. makuwa])
HSP 1 Score: 270 bits (691), Expect = 2.02e-86
Identity = 129/141 (91.49%), Postives = 132/141 (93.62%), Query Frame = 0
Query: 1 MLFTELGIKDDLKDETYLAAFLSCWLCLFVFSQKGSFLRPGVFRAASLMAAGTIYSLAVP 60
MLF ELGI+DDLKDETYLAAFLSCWLCLFVF +KGSFLRP VFR ASLM AGTIYSLAVP
Sbjct: 130 MLFAELGIRDDLKDETYLAAFLSCWLCLFVFPKKGSFLRPEVFRVASLMVAGTIYSLAVP 189
Query: 61 VLANIYHGLGLITKASNLIGRMNFHFPMHYVHGWLAHYFGTHYPLPTEVRGPKMTKFSGE 120
VLANIYHGLGLITKASN IGRM+FHFPMHYVHGWLAHYFGTHYPLP EVRGPKMT FSGE
Sbjct: 190 VLANIYHGLGLITKASNPIGRMDFHFPMHYVHGWLAHYFGTHYPLPREVRGPKMTNFSGE 249
Query: 121 GGSIYFGKYEARELIHNGARI 141
GGSIYFGKYEA ELIHNGARI
Sbjct: 250 GGSIYFGKYEAHELIHNGARI 270
BLAST of IVF0014700.1 vs. NCBI nr
Match:
KAA0047546.1 (hypothetical protein E6C27_scaffold2963G00230 [Cucumis melo var. makuwa])
HSP 1 Score: 276 bits (705), Expect = 6.55e-86
Identity = 133/141 (94.33%), Postives = 135/141 (95.74%), Query Frame = 0
Query: 1 MLFTELGIKDDLKDETYLAAFLSCWLCLFVFSQKGSFLRPGVFRAASLMAAGTIYSLAVP 60
MLF ELGIKDDLKDETYLAAFLSCWLCLFVF QKGSFLRPGVFRAASLMAA TIYSLAVP
Sbjct: 225 MLFAELGIKDDLKDETYLAAFLSCWLCLFVFPQKGSFLRPGVFRAASLMAADTIYSLAVP 284
Query: 61 VLANIYHGLGLITKASNLIGRMNFHFPMHYVHGWLAHYFGTHYPLPTEVRGPKMTKFSGE 120
VLANIYHGLGLITKASN IGRM+FHFPMHYVHGWLAHYFGTHYPLPTEVRGPKMT FSGE
Sbjct: 285 VLANIYHGLGLITKASNPIGRMDFHFPMHYVHGWLAHYFGTHYPLPTEVRGPKMTNFSGE 344
Query: 121 GGSIYFGKYEARELIHNGARI 141
GGSIYFG+YEARELIHN ARI
Sbjct: 345 GGSIYFGEYEARELIHNCARI 365
BLAST of IVF0014700.1 vs. NCBI nr
Match:
TYK06278.1 (hypothetical protein E5676_scaffold157G00620 [Cucumis melo var. makuwa])
HSP 1 Score: 276 bits (705), Expect = 1.17e-85
Identity = 133/141 (94.33%), Postives = 135/141 (95.74%), Query Frame = 0
Query: 1 MLFTELGIKDDLKDETYLAAFLSCWLCLFVFSQKGSFLRPGVFRAASLMAAGTIYSLAVP 60
MLF ELGIKDDLKDETYLAAFLSCWLCLFVF QKGSFLRPGVFRAASLMAA TIYSLAVP
Sbjct: 255 MLFAELGIKDDLKDETYLAAFLSCWLCLFVFPQKGSFLRPGVFRAASLMAADTIYSLAVP 314
Query: 61 VLANIYHGLGLITKASNLIGRMNFHFPMHYVHGWLAHYFGTHYPLPTEVRGPKMTKFSGE 120
VLANIYHGLGLITKASN IGRM+FHFPMHYVHGWLAHYFGTHYPLPTEVRGPKMT FSGE
Sbjct: 315 VLANIYHGLGLITKASNPIGRMDFHFPMHYVHGWLAHYFGTHYPLPTEVRGPKMTNFSGE 374
Query: 121 GGSIYFGKYEARELIHNGARI 141
GGSIYFG+YEARELIHN ARI
Sbjct: 375 GGSIYFGEYEARELIHNCARI 395
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7SHN8 | 1.2e-71 | 94.33 | PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc... | [more] |
A0A5A7VHW8 | 2.7e-71 | 93.62 | PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc... | [more] |
A0A5A7TZZ9 | 5.9e-71 | 94.33 | PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc... | [more] |
A0A5D3C543 | 5.9e-71 | 94.33 | PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc... | [more] |
A0A5D3DCE5 | 7.7e-71 | 93.62 | PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc... | [more] |
Match Name | E-value | Identity | Description | |
TYK20969.1 | 2.28e-89 | 93.62 | hypothetical protein E5676_scaffold18270G00010 [Cucumis melo var. makuwa] | [more] |
KAA0031751.1 | 1.81e-86 | 92.91 | hypothetical protein E6C27_scaffold506G00140 [Cucumis melo var. makuwa] | [more] |
KAA0057575.1 | 2.02e-86 | 91.49 | hypothetical protein E6C27_scaffold497G00470 [Cucumis melo var. makuwa] | [more] |
KAA0047546.1 | 6.55e-86 | 94.33 | hypothetical protein E6C27_scaffold2963G00230 [Cucumis melo var. makuwa] | [more] |
TYK06278.1 | 1.17e-85 | 94.33 | hypothetical protein E5676_scaffold157G00620 [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |