IVF0014072.1 (mRNA) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGAACGAGAAGGTGATTTCTATAAGGCTACGTGAATGTGTTTTCGTAGCGCCACCTATGGTTGTTAGGGGATTTTAGGATTCAAAGAGGCTGTGATCAAAGATCTGAGAACCTAAGCCTAGGTGAGCATATAAATGGAGGATTGCGATATGGCTTTGGGCCTAGATTAACCCATGATGGGTGGCTCTATATGCACATAGGAGCAAATATGGAGGTTGTTATTGTGGTAGGTGCTAAGTATGTGTGA ATGGTGAACGAGAAGGTGATTTCTATAAGGCTACGTGAATGTGTTTTCGTAGCGCCACCTATGGTTAACCTAAGCCTAGGTGAGCATATAAATGGAGGATTGCGATATGGCTTTGGGCCTAGATTAACCCATGATGGGTGGCTCTATATGCACATAGGAGCAAATATGGAGGTTGTTATTGTGGTAGGTGCTAAGTATGTGTGA ATGGTGAACGAGAAGGTGATTTCTATAAGGCTACGTGAATGTGTTTTCGTAGCGCCACCTATGGTTAACCTAAGCCTAGGTGAGCATATAAATGGAGGATTGCGATATGGCTTTGGGCCTAGATTAACCCATGATGGGTGGCTCTATATGCACATAGGAGCAAATATGGAGGTTGTTATTGTGGTAGGTGCTAAGTATGTGTGA MVNEKVISIRLRECVFVAPPMVNLSLGEHINGGLRYGFGPRLTHDGWLYMHIGANMEVVIVVGAKYV Homology
BLAST of IVF0014072.1 vs. ExPASy TrEMBL
Match: A0A5A7UUF7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold227G001110 PE=4 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 4.1e-14 Identity = 44/82 (53.66%), Postives = 56/82 (68.29%), Query Frame = 0
BLAST of IVF0014072.1 vs. ExPASy TrEMBL
Match: A0A5D3DQP8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold436G00840 PE=4 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 2.9e-07 Identity = 27/40 (67.50%), Postives = 33/40 (82.50%), Query Frame = 0
BLAST of IVF0014072.1 vs. NCBI nr
Match: KAA0058838.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK11255.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 88.6 bits (218), Expect = 8.91e-20 Identity = 44/81 (54.32%), Postives = 55/81 (67.90%), Query Frame = 0
BLAST of IVF0014072.1 vs. NCBI nr
Match: TYK25868.1 (hypothetical protein E5676_scaffold436G00840 [Cucumis melo var. makuwa]) HSP 1 Score: 66.2 bits (160), Expect = 1.23e-10 Identity = 27/40 (67.50%), Postives = 33/40 (82.50%), Query Frame = 0
BLAST of IVF0014072.1 vs. NCBI nr
Match: XP_031740114.1 (uncharacterized protein LOC105435219 [Cucumis sativus]) HSP 1 Score: 59.3 bits (142), Expect = 2.38e-09 Identity = 24/33 (72.73%), Postives = 28/33 (84.85%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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