IVF0013650.2 (mRNA) Melon (IVF77) v1

Overview


Name	IVF0013650.2
Type	mRNA
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Pol protein
Location	chr10: 13294369 .. 13302930 (-)
Sequence length	1545
RNA-Seq Expression	IVF0013650.2
Synteny	IVF0013650.2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATACCACGCAGAGTAGGCAGAAGAGTTATGCGGATGTGAGACGGAGGGATCTTGAGTTTGATGTGGGGGACAAGGTGTTCTTGAAGGTAGCACCTATGAAAGGTGTCTTACGATTTGAAAGGAGAGGAAAACTGAGTCCCCGTTTTGTTGGGCCGTTTGAGATTCTAGAGCGGATTGGCCTTGTAGCTTATCGCTTGGCGTTGCCACCATCACTCTCGACAGTTCATGATGTGTTCCATGTTTCTATGTTGAGGAAGTACGTGGCAGATCCATCCCATGTAGTTGATTACAAGCCACTAGAGATTGATGAAAACTTGAGCTATACTGAACAACCGTTGAGGTGCTGGCTAGAGAGGTGAAAATGTTGAGGAATAGAGAAATTCCTTTGGTTAAAGTCTTATGGCGGAATCACCGGGTGGAAGAGGCTACATGGGAGTGAGAAGATGACATGAGGTCCCGTTATCCCGAACTGTTCGAGGAATGAAACTTTCGAGGACGAAAGTTCCTTAAGGAGGGAATAATGTAACGCCCCGAATTTTTTCGAGGTAATTTTTATCATTTTGTGTGAATTTTCGGAAATTTAAAATTTTGGTGTAAATTCTCGGTTGCCTTCGAAGAGGGAAGAAAAAGAAATTTAGGGATATGAATTTCTTTAAATTAATATTTTGTAAATTGATATAATAATAATATATTAATTATATTATTATTATTGTTATTTAATAGTATTATTATTATTATTTAATATTAATATTTTTATAATTTAATATTAATATGATTATTATTATTTAATATTATTATTATATCATATTATTATTATTATATATTATAATTTAATAACATTATTATTTAATATATATATATATATAATAATATAATAATATATTTTTTTAAAATAACCCTAAAGCGCACCCCCCCAATCCATTTCTTCTTCTTCAACGTCTTCCACACGCGAGGCCGCCGCCGCCGTCCCCCAGCCTTCTCTCTTCCGCACCCGCCGGTCGCCATCCCTTCTCTCCGTCTCCCTCTCTCTATGGTGGTACCGTTTCCGTCTCCGTCGTCGGCAATCTCACCACTCCAGCTTTCGTCCGCCGCGGCCCATCCATTTCCGAACTCCCTCTCGGTCTCACGCACCCGGACGCTGCCGTGCGTCCTTCGTCCAACCGTGTCCGCCGACGCCCAGTCGCTCTCCGCCGCGTTGAAGCGGAGCCGGTCGTCGGACTCCTCCAAGCCGCGAAGCGTCCCCGTCGTCGAATCGAAGACCGTCGTCGTGGTTGCCCCGATTTCAAGCTAACCCGACCCGAGACCTGCTTCCAGTTCGACCCGCGATTCAAGCTGCAAATCCGAGTTGAGCCGAAGACTGAGCCGAGCCACGAGCCAAGTCAAGCCGAAGATCGAGCCGAGCCGCGAGCCGAGTCAAGCCAAGTTGAGCCGTGAGCCGCAAGCCGCGAGCCGAGGGTGAACCGAGCCGAGCCGAGGGTGAGCCAAGTCGAGTCGAGCCACCTAAGCCATATTTTTCTCCCTCCACTTCGGGTCACGGCGAGTCTTCGGTAAGGATCATTTTGGTAATTTACCCAATGTTGCTATAACCATTTCGAGTTTGAATATTAGAGTAAGACTGGGTCCTATCTTTCGTTCCTTGAAGGTAGTAGGGATTTGACGCTCAAGTTCTTGGGTCCCACGGCAAGTTCATTTGGGAATAGCTACCTTTACTCGGGTAAGCCGACGTTTGTTGTTTCGAATGATTTAAAAGGTGACTTTTACTAGTGTCATCATTTAAACCCTTGTGATTTCGTTTAGGTGGATCTGTTGAGCGTGGACTCGATCGAGGGCATAACCAAGTATCAGATAAGGGTTTTCCTACTACTAGACCTCAGATCGAGGTTAGAAACGTAGTAATCCCCAGGGGATTACACGTTAGTAACTGTACTGAATAAATGGATGTATGTTTGACTTTTAAGTATCGCTGTTATGCTCTTGTCTGATGTAAAGGTAACGTGACCGCTAGTCGTAGCTTGTGTGCCATCGGGTGTAAGGAGTTATTTACGGATAGACACCGATGCCCGGATGTTCTGTATATTGTAGTTATGTTAATGGGCTACGTTGTGGACTGAATTTGTATGTCGATGGACTTTAAAGTCTTAAGGTTAGGTATGTGGTAGTCTATTGTCTGGATATTGATCATGGAGTTTTGTCGTGGAAGGATTGTGAGTCCGGTTCTGATTTGTCTAGTTGACTGGATCTAAGGAATATCACAATGGTGTGTGAATTAGAAACGCTTATAGCAACTGAGGATGTAGTTGTTTAGATCTATACCATCTGACTGGAGAAGCCTATGGCAAATTTGTAATATGACTGTTGTCGGAGTATGACTGTTGTAGACAGTTTAGTATGGACTGAGGGGTAACGGTTAGCTTCATTTATGGGTAGTGTACCTTACGGATAGGTATATCCTTCGGGATCACTAGACTGATACGTGCATCCTTCGGGATCAATAGACTGATATGTGCATCCTTCGGGATCACTAGACTGATATGTGCATCCCTCGGGATCACTAGACTGATAGGTGTATCCTTCGGGATCACTAGACTGATACGTGCATCCTTTGGGATCACGGGACTGATGTGTGTGTTCAACGGAACCACTAGACTATTTACGTAGGGTGCCTCCGAATAGGAAGTTAACTGTTGTTCCCTAACGGGCCCAGTAGTGGGTCCCTTACTGGGTATATTTTATACTCACCCTTTATCTTCTTTAACTTTTCAGGTAAGGGTACAGCGAGGGGCAGACCGACGAGAGGCAGGAAGGATGCGTGAAGGCCATATGGACGCGTCTGTTTTCTTTATGCTTCCGCTGATGTATTTTGTTAGAATATTTGGTTTTGTGATTTTGAGTTTGATGACTTGAGTATTGTATTTGAAACTCTCGTGACTGTGATTTAAAATAGGGCCCGAAACTGCTTTTGTAATATTTCTAACGTTTTTAATGAATCGTAACCGGTCCTTTATGAGTTTTTGTGTTTTGTGGTCGAGTCTCAGTACTGAGTAGTGACCTCAGCTTAGTCCGGAAAGTTGGGTCGTTACAGCAAGGATATTAGTTTTTTTTTATATGACATTGTTTTCTTAATATAAAATTCAGGAATTGTGTTGGTATTTTGGCCATTTTAATGTTAAGGAATTGGCCAAAATGATTGTTTATCAAAACTCGAGACAGAATCCTTTTGTCTATTTTTGACTTGATTTGATTCAATGTTTCTAAGCTCTGGTATACAGTAATTCTAAGGTTTTTTGTTCATCTTCCATAATAATGTCATTTGGATAGTGTTTCACCTGTTGAATGACATAATAAATGGTATGTTTCAAAAAAGGGTAAGTTTAAACAAATTTACAAATGCAGAGCGTTATAAAAAAAAAAATACAGAAATATACAACACTATACTTACAGATATTCACATTATAGTTTGTTACCTTTTTTCCTTTTTCTTTCTTTACTTTACTTTGTTCTGTCTTTGCTTTACACCTTATTGATTTGCTACATGATGCTTGTTGATTCTTGCTCACCATCTATTTTTAAAATAGAAGACTAATATAAATTATACAAACAGTATAGAAACAGACATGAATATAGATAAGGCCTATTTGTATGCGATATAAATCATGGTACGTATATGTGGATGGTCGAGATAAATCGAGATGAATATAGACTCTATAGATCGAAATGAATATAGACTCAAACTTTTTTGTATGCGATATAGATAGTGCTAGATATATGTGGATGATAGAGATAGATCGAAATGAATATAGATTCAAACCTTTTTGTATGCAAGGTAGATCGTCGATCGGGACAATTGTGTTGAAGTAGTTACCAGGATATAAACGATTGACGATGAAAGGAAAAGTCTGAGCAAGTTCCTTCACCTTTTTATAATCTCTTTATTTGGATGGCATTTTGTAATTACGGTTTATTGGAGTTTCTGTAAATTTTCTTTTATAAACGATCGTTGAAGTTTCTCAACATGATCGTGTATACTTAAACTTTTTCGTCATCTTTTACTGTTTATTATCTTATCGTTTATATAATGATTATCATTTATATAATGTATAGAATCGTTTATGCTTATCATTTATATTTACAAACGTGATCGGATGTACAATCGTTATAGTATATTGTTATTGTTTAGCGTTTATTGTTGATCGTTTATATATTTGGTAATTTACGAGATCGTGTATCAATTGTATATTATTCTACACGATGGCGTCTAATAATCGTTTATTAACATTAGTCACGCGCGCGTGGACGATTAACCGCACGTTTGTTGGGGTATTTTTGGTATTTTGCATTGTGGACCTATGAGTTTTTTGTGTTTTTGAATTGTTCTATAGAGTATAAATAACTTGCCGTTTTATTATATTATTAAAAAGACCCCTAAAAAATTTATACATTCTAAGGGAAAATGACAGAACGTACACTTGTACTACAAAAATCAATAAAATTATGTTCATTTCCTTGATTTCCATGAATTAAATTTCTATATGCCGAAATCTTGTGTGTTTGGCACCTATTTAAGAACTAGACAATATTATTAATATTACATTAAATTAGAATTAAAAGTAAATTAAAATACCATTGAAAATTGGCATTGCAATTAATGTTCAAGTAAATTACTATTGGAAAAGTTTAAATTACAATTAATATTATATTAAATCTCGGTTGAAAAAATGGTCCTATAGAGGATAATTATCAAAAATGATAAATTTAGTAAAATATTTACAATATATAACAAAATTTTAGATTCTATCTATAATAGATATTTGTCTCATATGCTTCTATCAATTATATTGATAAGTAGTAATAGAAATTAACAGTGTCTATTATCCACAAAATCCAAAATTTCGTCATATGTTGTGAATATTTTAATTTATTTTACTATATTTAAAAATGCCCCCATATTAAAATATAGAAAAATGAACTAAAGTATTTACAAAATAAGTAAAATATCAAAGTGGGTCTGTGATGGATCATGATAGACTCATAAACTAGTATATGTGTAAAGTCATGAGTTAAGGTAGGGGACATGAAGGATCTGATATCAAGTATGAATGAGAGAAATCACAAGAAGATGTAAATAAAGATTAAGAAAGGCTTAAAAGAATTAAGAGTTAATACCTATACCAACAAGGTTGACCTTTTTTCCAAAGTTAAGCGTGCTTAGCTCAGAACAATTTTATATTGGGTGGTCTCCTTGGAATTTTCTTAGGATGCATGTGAGTGAGGACACAAAACATGATGAAAGGGCTCGTGTTGGTTTGTGGGAATGACTATCACTCTAATAAGCCTTTAAGACAAGTAAGGATGATGTTGCTAGGTTGTTGGGGAATGTTGAAGATCCGAATTTTGAATCCTAGGCTCGAAGCGTTACAATACGTGTGTATCTGTATCACTAATAGATTGAGATATTTTGGTGTATTTGTAGATATGTTTAGAATTTTTAATTTAGAATAATTTCGTTTGAAAAGTCGCTAATTTAGTGAAAATTATATTAAATAAAGAAATGGTATTATTATCGGTATAAAGAAGAGAAATAGAGGATATTGTACATTCAACTTTGAGATTTGAGGATTTATCTCATAGCCTCGAATATCATTAAAAAGAATTACATTACTAACCCGTAATTATACTTTGTGGAAGATGAGATATCTTTTTGGTTTCTCACGTTTAGAAAAGAAAACAGTCAATTGGTTTCCAATCTAGATGTGAGAAAATTTTGACCATAATTGACTAATAACAATATAATGATGTGACATAGACTATTGTTGAAAAAAGTCTCACACTTCTACCCGGGAGTAAGTATAAAACTAATAAAGAAGTTAAAAGAAAGCAAGAAAACTAATGGGCAAAAACTCTAAATTGGAGAAAAAACAGAGGACAAAAAATACATTATGTGAAAACTTATTACCCACATAAATTATTTATCTCTTCTAATCCCAATTACGTACATTTTATCATTTAGAATAACATTTTCTCAAAGTTTTTATAATACTCACATGGGAATTTGACCAAGGAGTTAAACTATGTTTAAGTTAAAACTGATTCCAATTAGGATGATTTAAAATCAAAGACATGTAAAAACTCTTCTATGCCATATTTTTGGATCCCAAGACATCCTTATTCTTTTCTGAAAAAATTCATTTCTAATATTAGAATCCAACAACTATAACATGATAACATGTAGATGGACCAGCACATATATCCCATTATTTCTTGCTCAAAACACATGATAATTAATTTAGCTTAACTACGAAATAAGTTATTATCTTCTATTGTGGTAGCCATTTCCCATCTTATTTCTTCCCCTCTTTCTGCTTTCTTCCCTTCTCCCAAGCATTGATTCATCTTCTAGTTGATTGCCATTTTTGAACCCCAAATAAAGGAAACATAAAATTTGTAAACCTAACAACTTCCACTCACCTTTGCTTTCATCTCAATTTACTAACCCTCTCCACTAGTAGTCCTTTTCGACATGGCTTTCTAATTTAGTGTTTTTACATGTTTCTTTTTTCTATGTAAGAAATAATATTTAACAAATCAATTCAAACGGATCTTGAATAGAATGTTTTTCACTGCTACAAAACTAGGTTTACTTGACGCTTGCAGTCTAGAAATACTTGACGCTTTTAATAAAAACTATCAAGTAAAATGAAAAAACGTCAATAATAACAAAAAAAGCTAAAAAATGCATAATTTTTCAAATTTTTTTCCTATACTTGACACATTAAAAATGTCGAGAACAATTTTATTTACTTGACATGTTTTAAATGTCAAGTACTGACTATTTTGGAATAAAAAAAAATTCTTTTCTAAAAGAAAAGATATCCCCCAAATTTTCAATCCTTTCTCTCTCCATACCACGATCTTTTTTCTTTTCTCTTCCTTTCACCACAAAATCTCCAAATGGTATCATCTAAACTGCAGCCCTAGCTCCCACCATTGCACGTCGGACGACTCCAACTCCCACCGTCGCACGTCTGGTGGCTTTAACTCCGTCCACCACTGCAAGTTCGTGACTCCATCCGTGACCCTGCATCTGCCGACGTGACTCCGCCCTGTCCTCGTTCTAACTCCCTCCACTGCCGCAAGTTTGTTCTCATTTTGTTGCTGTGATTTTGGTTTAGGAATATCTGTCTTCTGTAGAAAATACCTTAATTTTTTTACAACAGGATACTTTTTATGAGATAGTAGTTCTTTGTTCTATCTTGTTACTTGCAGCATCTTGGTGCCCTAGCCATAAAAATTTCTTGTAATATTTCATTTTGTCAAAATTCAGATTTGAGAAGTATGTCGGCTATGCTCTTGGTGTTCCAACGTATTTGATATATCGGAAAAAGAAATATATTGACTATTCTGGAATGTCCTTCAAGGTATGCATATCTTTCATAGTCGTCCACGCAGAGCTTTCTATCTCTTCCTTTTTGTTCATCTTAATCTATATTTTTTTGGTATTAATTATCAAGGTGTGGTTGGAATATCTTTATGCAGGATTTTATGGCAGGAAAGCTCCCACTAGTTCCTAGAGAACTTCCTACCCTAACTGATTAGGAAAATCATTTGACTACAATATTTCCGGAGGTATTCTACACTTGATTTACTCCAACAGTATGCTTGTTATGACCTGATTCTAGGATCTATTTTTCCCTCATTACTGAGGTGAAACTGAAGACATATTTGGAGATGAGGGGTAGTGATGGAGGCCCTTAGAGGAGATTATGTGCTTTGTTCCGGCATTGGTAATTTTCATGATATAATTAGACTCTATAGACCTCTTATTGAACGTTGATGTGATGTGTATCCCAATATACAAACTTCACATATATGGCTCATGTTTAATTTTGATCTTAGGAAAAATATTATTTTCCTTTTCCTCCTATTTCTTGGTGAGAGGTGTTTGCTATCATTTAGTTTTCTTGTTGGTGATCAACTACGCAATGTTGTTTAAATATTTTTGTGGTTGAGTTTTTTGTACTCAGGAAGTTTTCCGTTCACTGAAGTCATCATTGACTAGTATTGAAGCACTTCAGTATGCTGAATATGTAAGTATATTTGGTTACCTCTTTTTTGCATTTTTCTATTTCCTCTAAGGGTGGTTGTATGCTGCATTCTTCGAACTTTTTCTTCTCTAAAGGTTACCTCTTTTTTGCATTTTTCTCTAAAGGTTTTTCTTCTCTGAGGCTGAGAGAGCAGACACTGTGGTGACAGGTACGCTTCTAGTGTTGGGGCATTATGCCTTAATTCTGTTTGATTCTGGTTCATTACATTCCTTTATATCTTCTGCATTTGTGTTGCATGCTCGCTTAGAGGTAGAGCCTCTATACCATGTTTTATTAGTATCTACTCCTTCTGGGGAGAGTTTATTGTCGACAGAAAAGGTGAAAGCATGCCAGATTGAGATAGTAGGTCATGTGATAGAAGTAACGTTGTTAGTTCTTGATATGTACCACTTTGATGTAATTCTGGTTATGGATTGGCTAGCTGCTAACCATGCTAGCATAGATTGTTCCCGTTAG

mRNA sequence

ATGCATACCACGCAGAGTAGGCAGAAGAGTTATGCGGATGTGAGACGGAGGGATCTTGAGTTTGATGTGGGGGACAAGGTGTTCTTGAAGGTAGCACCTATGAAAGGTGTCTTACGATTTGAAAGGAGAGGAAAACTGAGTCCCCGTTTTGTTGGGCCGTTTGAGATTCTAGAGCGGATTGGCCTTGTAGCTTATCGCTTGGCGTTGCCACCATCACTCTCGACAGTTCATGATGTGTTCCATGTTTCTATGTTGAGGAAGTACGTGGCAGATCCATCCCATGTAGTTGATTACAAGCCACTAGAGATTGATGAAAACTTGAGCTATACTGAACAACCGTTGAGGTGCTGGCTAGAGAGGCCGCCGCCGCCGTCCCCCAGCCTTCTCTCTTCCGCACCCGCCGGTCGCCATCCCTTCTCTCCGTCTCCCTCTCTCTATGGTGGTACCGTTTCCGTCTCCGTCGTCGGCAATCTCACCACTCCAGCTTTCGTCCGCCGCGGCCCATCCATTTCCGAACTCCCTCTCGGTCTCACGCACCCGGACGCTGCCGTGCGTCCTTCGTCCAACCGTGTCCGCCGACGCCCAGTCGCTCTCCGCCGCGTTGAAGCGGAGCCGGTCGTCGGACTCCTCCAAGCCGCGAAGCGTCCCCGTCGTCGAATCGAAGACCGTCGTCGTGGTTGCCCCGATTTCAAGCTAACCCGACCCGAGACCTGCTTCCAGTTCGACCCGCGATTCAAGCTGCAAATCCGAGTTGAGCCGAAGACTGAGCCGAGCCACGAGCCAAGTCAAGCCGAAGATCGAGCCGAGCCGCGAGCCGAGTCAAGCCAAGTTGAGCCTAGGGATTTGACGCTCAAGTTCTTGGGTCCCACGGCAAGTTCATTTGGGAATAGCTACCTTTACTCGGGTGGATCTGTTGAGCGTGGACTCGATCGAGGGCATAACCAAGTATCAGATAAGGGTTTTCCTACTACTAGACCTCAGATCGAGGTAAGGGTACAGCGAGGGGCAGACCGACGAGAGGCAGGAAGGATGCGTGAAGGCCATATGGACGCATTTGAGAAGTATGTCGGCTATGCTCTTGGTGTTCCAACGTATTTGATATATCGGAAAAAGAAATATATTGACTATTCTGGAATGTCCTTCAAGGAAGTTTTCCGTTCACTGAAGTCATCATTGACTAGTATTGAAGCACTTCAGTATGCTGAATATGCTGAGAGAGCAGACACTGTGGTGACAGGTACGCTTCTAGTGTTGGGGCATTATGCCTTAATTCTGTTTGATTCTGGTTCATTACATTCCTTTATATCTTCTGCATTTGTGTTGCATGCTCGCTTAGAGGTAGAGCCTCTATACCATGTTTTATTAGTATCTACTCCTTCTGGGGAGAGTTTATTGTCGACAGAAAAGGTGAAAGCATGCCAGATTGAGATAGTAGGTCATGTGATAGAAGTAACGTTGTTAGTTCTTGATATGTACCACTTTGATGTAATTCTGGTTATGGATTGGCTAGCTGCTAACCATGCTAGCATAGATTGTTCCCGTTAG

Coding sequence (CDS)

ATGCATACCACGCAGAGTAGGCAGAAGAGTTATGCGGATGTGAGACGGAGGGATCTTGAGTTTGATGTGGGGGACAAGGTGTTCTTGAAGGTAGCACCTATGAAAGGTGTCTTACGATTTGAAAGGAGAGGAAAACTGAGTCCCCGTTTTGTTGGGCCGTTTGAGATTCTAGAGCGGATTGGCCTTGTAGCTTATCGCTTGGCGTTGCCACCATCACTCTCGACAGTTCATGATGTGTTCCATGTTTCTATGTTGAGGAAGTACGTGGCAGATCCATCCCATGTAGTTGATTACAAGCCACTAGAGATTGATGAAAACTTGAGCTATACTGAACAACCGTTGAGGTGCTGGCTAGAGAGGCCGCCGCCGCCGTCCCCCAGCCTTCTCTCTTCCGCACCCGCCGGTCGCCATCCCTTCTCTCCGTCTCCCTCTCTCTATGGTGGTACCGTTTCCGTCTCCGTCGTCGGCAATCTCACCACTCCAGCTTTCGTCCGCCGCGGCCCATCCATTTCCGAACTCCCTCTCGGTCTCACGCACCCGGACGCTGCCGTGCGTCCTTCGTCCAACCGTGTCCGCCGACGCCCAGTCGCTCTCCGCCGCGTTGAAGCGGAGCCGGTCGTCGGACTCCTCCAAGCCGCGAAGCGTCCCCGTCGTCGAATCGAAGACCGTCGTCGTGGTTGCCCCGATTTCAAGCTAACCCGACCCGAGACCTGCTTCCAGTTCGACCCGCGATTCAAGCTGCAAATCCGAGTTGAGCCGAAGACTGAGCCGAGCCACGAGCCAAGTCAAGCCGAAGATCGAGCCGAGCCGCGAGCCGAGTCAAGCCAAGTTGAGCCTAGGGATTTGACGCTCAAGTTCTTGGGTCCCACGGCAAGTTCATTTGGGAATAGCTACCTTTACTCGGGTGGATCTGTTGAGCGTGGACTCGATCGAGGGCATAACCAAGTATCAGATAAGGGTTTTCCTACTACTAGACCTCAGATCGAGGTAAGGGTACAGCGAGGGGCAGACCGACGAGAGGCAGGAAGGATGCGTGAAGGCCATATGGACGCATTTGAGAAGTATGTCGGCTATGCTCTTGGTGTTCCAACGTATTTGATATATCGGAAAAAGAAATATATTGACTATTCTGGAATGTCCTTCAAGGAAGTTTTCCGTTCACTGAAGTCATCATTGACTAGTATTGAAGCACTTCAGTATGCTGAATATGCTGAGAGAGCAGACACTGTGGTGACAGGTACGCTTCTAGTGTTGGGGCATTATGCCTTAATTCTGTTTGATTCTGGTTCATTACATTCCTTTATATCTTCTGCATTTGTGTTGCATGCTCGCTTAGAGGTAGAGCCTCTATACCATGTTTTATTAGTATCTACTCCTTCTGGGGAGAGTTTATTGTCGACAGAAAAGGTGAAAGCATGCCAGATTGAGATAGTAGGTCATGTGATAGAAGTAACGTTGTTAGTTCTTGATATGTACCACTTTGATGTAATTCTGGTTATGGATTGGCTAGCTGCTAACCATGCTAGCATAGATTGTTCCCGTTAG

Protein sequence

MHTTQSRQKSYADVRRRDLEFDVGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGLVAYRLALPPSLSTVHDVFHVSMLRKYVADPSHVVDYKPLEIDENLSYTEQPLRCWLERPPPPSPSLLSSAPAGRHPFSPSPSLYGGTVSVSVVGNLTTPAFVRRGPSISELPLGLTHPDAAVRPSSNRVRRRPVALRRVEAEPVVGLLQAAKRPRRRIEDRRRGCPDFKLTRPETCFQFDPRFKLQIRVEPKTEPSHEPSQAEDRAEPRAESSQVEPRDLTLKFLGPTASSFGNSYLYSGGSVERGLDRGHNQVSDKGFPTTRPQIEVRVQRGADRREAGRMREGHMDAFEKYVGYALGVPTYLIYRKKKYIDYSGMSFKEVFRSLKSSLTSIEALQYAEYAERADTVVTGTLLVLGHYALILFDSGSLHSFISSAFVLHARLEVEPLYHVLLVSTPSGESLLSTEKVKACQIEIVGHVIEVTLLVLDMYHFDVILVMDWLAANHASIDCSR

Homology

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BLAST of IVF0013650.2 vs. ExPASy Swiss-Prot
Match: Q1W2L8 (Glutamate--cysteine ligase, chloroplastic OS=Nicotiana tabacum OX=4097 GN=GSH1 PE=2 SV=2)

HSP 1 Score: 52.0 bits (123), Expect = 2.3e-05
Identity = 29/72 (40.28%), Postives = 39/72 (54.17%), Query Frame = 0


Query: 314 NQVSDKGFPTTRPQIEVRVQRGADRREAGRMREGHMDA--FEKYVGYALGVPTYLIYRKK 373
           N    +G P     +   +    D   AG +     D+  FE+YV YAL VP Y +YRKK
Sbjct: 285 NSPFTEGKPNGYLSMRSHIWTDTDNNRAGMLPFVFDDSFGFEQYVDYALDVPMYFVYRKK 344

Query: 374 KYIDYSGMSFKE 384
           KYID +GMSF++
Sbjct: 345 KYIDCAGMSFRD 356

[Close]

BLAST of IVF0013650.2 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 4.0e-05
Identity = 33/90 (36.67%), Postives = 49/90 (54.44%), Query Frame = 0


Query: 1    MHTTQSRQKSYADVRRRDL-EFDVGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILER 60
            ++T   + K Y D++ +++ EF  GD V +K     G L   +  KL+P F GPF +L++
Sbjct: 1171 LNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK-RTKTGFL--HKSNKLAPSFAGPFYVLQK 1230

Query: 61   IGLVAYRLALPPSLSTV-HDVFHVSMLRKY 89
             G   Y L LP S+  +    FHVS L KY
Sbjct: 1231 SGPNNYELDLPDSIKHMFSSTFHVSHLEKY 1257

[Close]

BLAST of IVF0013650.2 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 4.0e-05
Identity = 33/90 (36.67%), Postives = 49/90 (54.44%), Query Frame = 0


Query: 1    MHTTQSRQKSYADVRRRDL-EFDVGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILER 60
            ++T   + K Y D++ +++ EF  GD V +K     G L   +  KL+P F GPF +L++
Sbjct: 1171 LNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK-RTKTGFL--HKSNKLAPSFAGPFYVLQK 1230

Query: 61   IGLVAYRLALPPSLSTV-HDVFHVSMLRKY 89
             G   Y L LP S+  +    FHVS L KY
Sbjct: 1231 SGPNNYELDLPDSIKHMFSSTFHVSHLEKY 1257

[Close]

BLAST of IVF0013650.2 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 4.0e-05
Identity = 33/90 (36.67%), Postives = 49/90 (54.44%), Query Frame = 0


Query: 1    MHTTQSRQKSYADVRRRDL-EFDVGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILER 60
            ++T   + K Y D++ +++ EF  GD V +K     G L   +  KL+P F GPF +L++
Sbjct: 1171 LNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK-RTKTGFL--HKSNKLAPSFAGPFYVLQK 1230

Query: 61   IGLVAYRLALPPSLSTV-HDVFHVSMLRKY 89
             G   Y L LP S+  +    FHVS L KY
Sbjct: 1231 SGPNNYELDLPDSIKHMFSSTFHVSHLEKY 1257

[Close]

BLAST of IVF0013650.2 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 4.0e-05
Identity = 33/90 (36.67%), Postives = 49/90 (54.44%), Query Frame = 0


Query: 1    MHTTQSRQKSYADVRRRDL-EFDVGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILER 60
            ++T   + K Y D++ +++ EF  GD V +K     G L   +  KL+P F GPF +L++
Sbjct: 1171 LNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK-RTKTGFL--HKSNKLAPSFAGPFYVLQK 1230

Query: 61   IGLVAYRLALPPSLSTV-HDVFHVSMLRKY 89
             G   Y L LP S+  +    FHVS L KY
Sbjct: 1231 SGPNNYELDLPDSIKHMFSSTFHVSHLEKY 1257

[Close]

BLAST of IVF0013650.2 vs. ExPASy TrEMBL
Match: A0A5A7VIM5 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold38G001090 PE=4 SV=1)

HSP 1 Score: 490.3 bits (1261), Expect = 9.5e-135
Identity = 288/437 (65.90%), Postives = 291/437 (66.59%), Query Frame = 0


Query: 1   MHTTQSRQKSYADVRRRDLEFDVGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERI 60
           MHTTQSRQKSYADVRRRDLEFDVGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERI
Sbjct: 1   MHTTQSRQKSYADVRRRDLEFDVGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERI 60

Query: 61  GLVAYRLALPPSLSTVHDVFHVSMLRKYVADPSHVVDYKPLEIDENLSYTEQPLR----- 120
           GLVAYRLALPPSLSTVHDVFHVSMLRKYVADPSHVVDYKPLEIDENLSYTEQP+      
Sbjct: 61  GLVAYRLALPPSLSTVHDVFHVSMLRKYVADPSHVVDYKPLEIDENLSYTEQPVEVLARE 120

Query: 121 --------------CWLE--------RPPPPSPSLLSSAPAGRHPFSPSPSLYGGTVSVS 180
                          W           PPPPSPSLLSSAPAGRHPFSPSPSLYGGTVSVS
Sbjct: 121 VKMLRNREIPLVKVLWRNHRVEEATWEPPPPSPSLLSSAPAGRHPFSPSPSLYGGTVSVS 180

Query: 181 VVGNLTTPAFVRRGPSISELPLGLTHPDAAVRPSSNRVRRRPVALRRVEAEPVVGLLQAA 240
           VVGNLTTPAFVRRGPSISELPLGLTHPDAAVRPSSNRVRRRPVALRRVEAEPVVGLLQAA
Sbjct: 181 VVGNLTTPAFVRRGPSISELPLGLTHPDAAVRPSSNRVRRRPVALRRVEAEPVVGLLQAA 240

Query: 241 KRPRRRIEDRRRGCPDFKLTRPETCFQFDPRFKLQIRVEPKTEPSHEPSQAEDRAEPRAE 300
           KRPRRRIEDRRRGCPDFKLTRPETCF                                  
Sbjct: 241 KRPRRRIEDRRRGCPDFKLTRPETCFH--------------------------------- 300

Query: 301 SSQVEPRDLTLKFLGPTASSFGNSYLYSG-----------GSVERGLDR----------- 352
                 RDLTLKFLGPTASSFGNSYLYSG           G  E   DR           
Sbjct: 301 ------RDLTLKFLGPTASSFGNSYLYSGNVTASRSLCAIGCKELFTDRHRCPDVLYVVV 360

[Close]

BLAST of IVF0013650.2 vs. ExPASy TrEMBL
Match: A0A5A7SYA6 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold69G00770 PE=4 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 4.8e-94
Identity = 202/273 (73.99%), Postives = 207/273 (75.82%), Query Frame = 0


Query: 1   MHTTQSRQKSYADVRRRDLEFDVGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERI 60
           M T QSRQKSYADVRR+DLEFDV DKVFLKVA MKGVLRFERRGKLSPRFVG FEILERI
Sbjct: 466 MQTAQSRQKSYADVRRKDLEFDVEDKVFLKVASMKGVLRFERRGKLSPRFVGSFEILERI 525

Query: 61  GLVAYRLALPPSLSTVHDVFHVSMLRKYVADPSHVVDYKPLEIDENLSYTEQPLR----- 120
           G +AYRLALP SLSTVHDVFHVSMLRKYV DPSHVVDY+PLEIDENLSY EQP+      
Sbjct: 526 GPIAYRLALPSSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYNEQPVEVLARE 585

Query: 121 --------------CWLE--------------RPPPPSPSLLSSAPAGRHPFSPSPSLYG 180
                          W                RPPPPSPSLLSSA A  HP     SL G
Sbjct: 586 VKMLRNREIPLVKVLWQNHRVEEATWEGSNDMRPPPPSPSLLSSALASHHP----SSLCG 645

Query: 181 GTVSVSVVGNLTTPAFVRRGPSISELPLGLTHPDAAVRPSSNRVRRRPVALRRVEAEPVV 240
           GTVSVSVVGNLTTPAFVRR PSI ELPLGLTH DAAVRPSSNRVRRRPVALRRVEAEPVV
Sbjct: 646 GTVSVSVVGNLTTPAFVRRDPSIFELPLGLTHSDAAVRPSSNRVRRRPVALRRVEAEPVV 705

[Close]

BLAST of IVF0013650.2 vs. ExPASy TrEMBL
Match: A0A5D3DV03 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold478G00240 PE=4 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 2.7e-89
Identity = 252/527 (47.82%), Postives = 291/527 (55.22%), Query Frame = 0


Query: 1   MHTTQSRQKSYADVRRRDLEFDVGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERI 60
           M T QSRQKSYA+VR +DLEFDVGDKVFLKVAPMKGVLRFERRGKLSPRFV PFEILE+I
Sbjct: 331 MQTVQSRQKSYANVRWKDLEFDVGDKVFLKVAPMKGVLRFERRGKLSPRFVRPFEILEQI 390

Query: 61  GLVAYRLALPPSLSTVHDVFHVSMLRKYVADPSHVVDYKPLEIDENLSYTEQPLRCWLER 120
           G VAYRLALPPSLSTVHDVFHVSMLRKYV DPSHVVDY+PLEIDENLSYTEQP+      
Sbjct: 391 GPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLARE 450

Query: 121 PPPPSPSLLS--SAPAGRHPFSPSPSLYGGTVSVSVVGNLTTPAFVRRGPSISELPLGLT 180
             P S   +   +  +G+   +  P +    V +    ++T P  V   PS     L + 
Sbjct: 451 VDPLSVDSIGGHNQVSGKGFPTTEPRIEARNVVIHRGLHVTRPLVVACVPSGVRSCLRI- 510

Query: 181 HPDA--AVRPSSNRVRRRPVALRRV-EAEPVVGLLQAAKRPRRRIEDRRRGCPDFKLTRP 240
            PDA  +VR      RR    +R V EA    G L   K      +   R  P    T  
Sbjct: 511 DPDAGCSVRVQQGADRREAGMMRIVFEALVTSGNLGRYKYD-AEFDMLSRFPPKMIATEA 570

Query: 241 ETCFQFDPRFKLQIR-----VEPKTEPSHEPSQAEDRAEPRAESSQV---EPRDLTLKFL 300
               +F    +L I+      +P T         +   + RA SS+V   E R    K  
Sbjct: 571 ARADKFVRGLRLDIQGFVGAFQPATHADALRLAVDFSLQERANSSKVAGGEFRRFQQKPF 630

Query: 301 GPTASSFGNSYLYSGGSVERGLDRGHNQVSDKGFPTTRPQIEVRVQRGADRREAGRMREG 360
               ++ G S   + G    G      ++  K                  R+E   +   
Sbjct: 631 EAGEAARGKSLCTTCGKHHLGRCLFRTRICFK-----------------CRQEGHTVDTC 690

Query: 361 HMDAFEKYVGYALGVPTYLIYRKKKYIDYSGMSFKEVFRSLKSSLTSIEALQYAEYAERA 420
            M   E       G P            + G     +F + K+             AERA
Sbjct: 691 PMRLTENVQNQGAGAP------------HQG----TIFATNKTD------------AERA 750

Query: 421 DTVVTGTLLVLGHYALILFDSGSLHSFISSAFVLHARLEVEPLYHVLLVSTPSGESLLST 480
            TVVTGTL VLGHYAL+LFDSGS HSFI SAFVLHA LEVEPL+HVL VSTPSGE +LS 
Sbjct: 751 GTVVTGTLPVLGHYALVLFDSGSSHSFIFSAFVLHACLEVEPLHHVLSVSTPSGECMLSM 810

Query: 481 EKVKACQIEIVGHVIEVTLLVLDMYHFDVILVMDWLAANHASIDCSR 515
           EKVKACQIEI GHV EVTLLVLDM  FDVIL MDWL ANHASIDCSR
Sbjct: 811 EKVKACQIEIAGHVFEVTLLVLDMLDFDVILGMDWLVANHASIDCSR 810

[Close]

BLAST of IVF0013650.2 vs. ExPASy TrEMBL
Match: A0A5A7SSB1 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold452G00050 PE=4 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 3.7e-86
Identity = 253/545 (46.42%), Postives = 290/545 (53.21%), Query Frame = 0


Query: 1   MHTTQSRQKSYADVRRRDLEFDVGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERI 60
           M T QSRQKSYA+VR +DLEFDVGDKVFLKVAPMKGVLRFERRGKLSPRFV PFEILE+I
Sbjct: 331 MQTVQSRQKSYANVRWKDLEFDVGDKVFLKVAPMKGVLRFERRGKLSPRFVRPFEILEQI 390

Query: 61  GLVAYRLALPPSLSTVHDVFHVSMLRKYVADPSHVVDYKPLEIDENLSYTEQP------- 120
           G VAYRLALPPSLSTVHDVFHVSMLRKYV DPSHVVDY+PLEIDENLSYTEQP       
Sbjct: 391 GPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLARE 450

Query: 121 LRCWLERPPPPSPSLLSSAPAGRHPFSP-------------SPSLYGGTVSVSVVGNLTT 180
           ++    R  P    L  +       + P              P +    V +    ++T 
Sbjct: 451 VKMLRNRQIPLVKVLWRNHRVEEATWEPEDDMRSRKGFPTTEPRIEARNVVIHRGLHVTR 510

Query: 181 PAFVRRGPSISELPLGLTHPDA--AVRPSSNRVRRRPVALRRV-EAEPVVGLLQAAKRPR 240
           P  V   PS     L +  PDA  +VR      RR    +R V EA    G L   K   
Sbjct: 511 PLVVACVPSGVRSCLRI-DPDAGCSVRVQQGADRREAGMMRIVFEALVTSGNLGRYKYD- 570

Query: 241 RRIEDRRRGCPDFKLTRPETCFQFDPRFKLQIR-----VEPKTEPSHEPSQAEDRAEPRA 300
              +   R  P    T      +F    +L I+      +P T         +   + RA
Sbjct: 571 AEFDMLSRFPPKMIATEAARADKFVRGLRLDIQGFVGAFQPATHADALRLAVDFSLQERA 630

Query: 301 ESSQV---EPRDLTLKFLGPTASSFGNSYLYSGGSVERGLDRGHNQVSDKGFPTTRPQIE 360
            SS+V   E R    K      ++ G S   + G    G      ++  K          
Sbjct: 631 NSSKVAGGEFRRFQQKPFEAGEAARGKSLCTTCGKHHLGRCLFRTRICFK---------- 690

Query: 361 VRVQRGADRREAGRMREGHMDAFEKYVGYALGVPTYLIYRKKKYIDYSGMSFKEVFRSLK 420
                   R+E   +    M   E       G P            + G     +F + K
Sbjct: 691 -------CRQEGHTVDTCPMRLTENVQNQGAGAP------------HQG----TIFATNK 750

Query: 421 SSLTSIEALQYAEYAERADTVVTGTLLVLGHYALILFDSGSLHSFISSAFVLHARLEVEP 480
           +             AERA TVVTGTL VLGHYAL+LFDSGS HSFI SAFVLHA LEVEP
Sbjct: 751 TD------------AERAGTVVTGTLPVLGHYALVLFDSGSSHSFIFSAFVLHACLEVEP 810

Query: 481 LYHVLLVSTPSGESLLSTEKVKACQIEIVGHVIEVTLLVLDMYHFDVILVMDWLAANHAS 515
           L+HVL VSTPSGE +LS EKVKACQIEI GHV EVTLLVLDM  FDVIL MDWL ANHAS
Sbjct: 811 LHHVLSVSTPSGECMLSMEKVKACQIEIAGHVFEVTLLVLDMLDFDVILGMDWLVANHAS 828

[Close]

BLAST of IVF0013650.2 vs. ExPASy TrEMBL
Match: A0A5A7UPE4 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold431G00120 PE=4 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 1.1e-85
Identity = 193/299 (64.55%), Postives = 205/299 (68.56%), Query Frame = 0


Query: 5    QSRQKSYADVRRRDLEFDVGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGLVA 64
            +SRQKSYADVRRRDLEFDVGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIG VA
Sbjct: 1070 ESRQKSYADVRRRDLEFDVGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVA 1129

Query: 65   YRLALPPSLSTVHDVFHVSMLRKYVADPSHVVDYKPLEIDENLSYTEQPLRCWLERPPPP 124
            YRLALP SLSTVHDVFHVSMLRKYV DPSHVVDY+PLEIDENLSYTEQP+          
Sbjct: 1130 YRLALPQSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKML 1189

Query: 125  SPSLLSSAPAGRHPFSPSPSLYGGTVSVSVVGNLTTPAFVRRGPSISELPLGLTHPDAAV 184
                ++             + +     +  +       FV  GPSISE PLGLTH DAAV
Sbjct: 1190 RNREIALVKVLWRNHRMEEATWEQEDDMRSL-------FVCHGPSISEHPLGLTHSDAAV 1249

Query: 185  RPSSNRVRRRPVALRRVEAEPVVGLLQAAKRPRRRIEDR-RRGCPDFKLTRPETCFQFDP 244
            RPSS+ VRRRPVALRRVEAEPVVGLLQAAKR RR+      RGCP FKLTRPET FQ + 
Sbjct: 1250 RPSSHHVRRRPVALRRVEAEPVVGLLQAAKRSRRQTSKTVARGCPGFKLTRPETRFQSNS 1309

Query: 245  RFKLQIRVEPKTEPSHEPSQAEDRAEPRAESSQVEPRDLTLKFLGPTASSFGNSYLYSG 303
            RFKL                                RDLTLKFLGPTASSFGNS LYSG
Sbjct: 1310 RFKL--------------------------------RDLTLKFLGPTASSFGNSSLYSG 1329

[Close]

BLAST of IVF0013650.2 vs. NCBI nr
Match: KAA0067060.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 489 bits (1258), Expect = 3.82e-167
Identity = 288/437 (65.90%), Postives = 291/437 (66.59%), Query Frame = 0


Query: 1   MHTTQSRQKSYADVRRRDLEFDVGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERI 60
           MHTTQSRQKSYADVRRRDLEFDVGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERI
Sbjct: 1   MHTTQSRQKSYADVRRRDLEFDVGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERI 60

Query: 61  GLVAYRLALPPSLSTVHDVFHVSMLRKYVADPSHVVDYKPLEIDENLSYTEQPLRC---- 120
           GLVAYRLALPPSLSTVHDVFHVSMLRKYVADPSHVVDYKPLEIDENLSYTEQP+      
Sbjct: 61  GLVAYRLALPPSLSTVHDVFHVSMLRKYVADPSHVVDYKPLEIDENLSYTEQPVEVLARE 120

Query: 121 ---------------WLER--------PPPPSPSLLSSAPAGRHPFSPSPSLYGGTVSVS 180
                          W           PPPPSPSLLSSAPAGRHPFSPSPSLYGGTVSVS
Sbjct: 121 VKMLRNREIPLVKVLWRNHRVEEATWEPPPPSPSLLSSAPAGRHPFSPSPSLYGGTVSVS 180

Query: 181 VVGNLTTPAFVRRGPSISELPLGLTHPDAAVRPSSNRVRRRPVALRRVEAEPVVGLLQAA 240
           VVGNLTTPAFVRRGPSISELPLGLTHPDAAVRPSSNRVRRRPVALRRVEAEPVVGLLQAA
Sbjct: 181 VVGNLTTPAFVRRGPSISELPLGLTHPDAAVRPSSNRVRRRPVALRRVEAEPVVGLLQAA 240

Query: 241 KRPRRRIEDRRRGCPDFKLTRPETCFQFDPRFKLQIRVEPKTEPSHEPSQAEDRAEPRAE 300
           KRPRRRIEDRRRGCPDFKLTRPETCF                                  
Sbjct: 241 KRPRRRIEDRRRGCPDFKLTRPETCFH--------------------------------- 300

Query: 301 SSQVEPRDLTLKFLGPTASSFGNSYLYSG-----------GSVERGLDR----------- 351
                 RDLTLKFLGPTASSFGNSYLYSG           G  E   DR           
Sbjct: 301 ------RDLTLKFLGPTASSFGNSYLYSGNVTASRSLCAIGCKELFTDRHRCPDVLYVVV 360

[Close]

BLAST of IVF0013650.2 vs. NCBI nr
Match: KAA0036202.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 354 bits (908), Expect = 9.10e-109
Identity = 204/285 (71.58%), Postives = 211/285 (74.04%), Query Frame = 0


Query: 1   MHTTQSRQKSYADVRRRDLEFDVGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERI 60
           M T QSRQKSYADVRR+DLEFDV DKVFLKVA MKGVLRFERRGKLSPRFVG FEILERI
Sbjct: 466 MQTAQSRQKSYADVRRKDLEFDVEDKVFLKVASMKGVLRFERRGKLSPRFVGSFEILERI 525

Query: 61  GLVAYRLALPPSLSTVHDVFHVSMLRKYVADPSHVVDYKPLEIDENLSYTEQPLRC---- 120
           G +AYRLALP SLSTVHDVFHVSMLRKYV DPSHVVDY+PLEIDENLSY EQP+      
Sbjct: 526 GPIAYRLALPSSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYNEQPVEVLARE 585

Query: 121 ---------------WLE--------------RPPPPSPSLLSSAPAGRHPFSPSPSLYG 180
                          W                RPPPPSPSLLSSA A  HP S    L G
Sbjct: 586 VKMLRNREIPLVKVLWQNHRVEEATWEGSNDMRPPPPSPSLLSSALASHHPSS----LCG 645

Query: 181 GTVSVSVVGNLTTPAFVRRGPSISELPLGLTHPDAAVRPSSNRVRRRPVALRRVEAEPVV 240
           GTVSVSVVGNLTTPAFVRR PSI ELPLGLTH DAAVRPSSNRVRRRPVALRRVEAEPVV
Sbjct: 646 GTVSVSVVGNLTTPAFVRRDPSIFELPLGLTHSDAAVRPSSNRVRRRPVALRRVEAEPVV 705

Query: 241 GLLQAAKRPRRRIEDR-RRGCPDFKLTRPETCFQFDPRFKLQIRV 251
           GLLQAAKRPRRR      RGC  FKLTRPET  +F  R   Q+ +
Sbjct: 706 GLLQAAKRPRRRTPKTVARGCLGFKLTRPET--RFHSRVPRQVHL 744

[Close]

BLAST of IVF0013650.2 vs. NCBI nr
Match: TYK27130.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 335 bits (860), Expect = 5.58e-101
Identity = 248/529 (46.88%), Postives = 301/529 (56.90%), Query Frame = 0


Query: 1   MHTTQSRQKSYADVRRRDLEFDVGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERI 60
           M T QSRQKSYA+VR +DLEFDVGDKVFLKVAPMKGVLRFERRGKLSPRFV PFEILE+I
Sbjct: 331 MQTVQSRQKSYANVRWKDLEFDVGDKVFLKVAPMKGVLRFERRGKLSPRFVRPFEILEQI 390

Query: 61  GLVAYRLALPPSLSTVHDVFHVSMLRKYVADPSHVVDYKPLEIDENLSYTEQPLRCWLER 120
           G VAYRLALPPSLSTVHDVFHVSMLRKYV DPSHVVDY+PLEIDENLSYTEQP+      
Sbjct: 391 GPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLARE 450

Query: 121 PPPPSPSLLS--SAPAGRHPFSPSPSLYGGTVSVSVVGNLTTPAFVRRGPSISELPLGLT 180
             P S   +   +  +G+   +  P +    V +    ++T P  V   PS     L + 
Sbjct: 451 VDPLSVDSIGGHNQVSGKGFPTTEPRIEARNVVIHRGLHVTRPLVVACVPSGVRSCLRID 510

Query: 181 HPDAAVRPSSNRVR----RRPVALRRVEAEPVVGLLQAAKRPRRRIEDRRRGCPDFKLTR 240
            PDA     S RV+    RR   + R+  E +V      +                    
Sbjct: 511 -PDAGC---SVRVQQGADRREAGMMRIVFEALVTSGNLGR-------------------- 570

Query: 241 PETCFQFDPRFKLQIRVEPK---TEPSHEPSQAEDRAEPRAESSQVEPRDLTLKFLGPTA 300
               +++D  F +  R  PK   TE +        RA+      +++ +     F   T 
Sbjct: 571 ----YKYDAEFDMLSRFPPKMIATEAA--------RADKFVRGLRLDIQGFVGAFQPATH 630

Query: 301 SSFGNSYLYSGGSVERGLDRGHNQVSDKGFPTTRPQIEVRVQRGADRREAGRMREGHMDA 360
           +           +V+  L    N     G    R Q     Q+  +  EA R +      
Sbjct: 631 ADALRL------AVDFSLQERANSSKVAGGEFRRFQ-----QKPFEAGEAARGKSLCTTC 690

Query: 361 FEKYVGYALGVPTYLIYRKKKY---IDYSGMSFKEVFRSLKSSLT---SIEALQYAEYAE 420
            + ++G  L   T + ++ ++    +D   M   E  ++  +      +I A    + AE
Sbjct: 691 GKHHLGRCL-FRTRICFKCRQEGHTVDTCPMRLTENVQNQGAGAPHQGTIFATNKTD-AE 750

Query: 421 RADTVVTGTLLVLGHYALILFDSGSLHSFISSAFVLHARLEVEPLYHVLLVSTPSGESLL 480
           RA TVVTGTL VLGHYAL+LFDSGS HSFI SAFVLHA LEVEPL+HVL VSTPSGE +L
Sbjct: 751 RAGTVVTGTLPVLGHYALVLFDSGSSHSFIFSAFVLHACLEVEPLHHVLSVSTPSGECML 810

Query: 481 STEKVKACQIEIVGHVIEVTLLVLDMYHFDVILVMDWLAANHASIDCSR 514
           S EKVKACQIEI GHV EVTLLVLDM  FDVIL MDWL ANHASIDCSR
Sbjct: 811 SMEKVKACQIEIAGHVFEVTLLVLDMLDFDVILGMDWLVANHASIDCSR 810

[Close]

BLAST of IVF0013650.2 vs. NCBI nr
Match: KAA0032109.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 325 bits (833), Expect = 6.31e-97
Identity = 249/547 (45.52%), Postives = 300/547 (54.84%), Query Frame = 0


Query: 1   MHTTQSRQKSYADVRRRDLEFDVGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERI 60
           M T QSRQKSYA+VR +DLEFDVGDKVFLKVAPMKGVLRFERRGKLSPRFV PFEILE+I
Sbjct: 331 MQTVQSRQKSYANVRWKDLEFDVGDKVFLKVAPMKGVLRFERRGKLSPRFVRPFEILEQI 390

Query: 61  GLVAYRLALPPSLSTVHDVFHVSMLRKYVADPSHVVDYKPLEIDENLSYTEQPL------ 120
           G VAYRLALPPSLSTVHDVFHVSMLRKYV DPSHVVDY+PLEIDENLSYTEQP+      
Sbjct: 391 GPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLARE 450

Query: 121 -RCWLERPPPPSPSLLSSAPAGRHPFSPS-------------PSLYGGTVSVSVVGNLTT 180
            +    R  P    L  +       + P              P +    V +    ++T 
Sbjct: 451 VKMLRNRQIPLVKVLWRNHRVEEATWEPEDDMRSRKGFPTTEPRIEARNVVIHRGLHVTR 510

Query: 181 PAFVRRGPSISELPLGLTHPDAAVRPSSNRVR----RRPVALRRVEAEPVVGLLQAAKRP 240
           P  V   PS     L +  PDA     S RV+    RR   + R+  E +V      +  
Sbjct: 511 PLVVACVPSGVRSCLRID-PDAGC---SVRVQQGADRREAGMMRIVFEALVTSGNLGR-- 570

Query: 241 RRRIEDRRRGCPDFKLTRPETCFQFDPRFKLQIRVEPK---TEPSHEPSQAEDRAEPRAE 300
                                 +++D  F +  R  PK   TE +        RA+    
Sbjct: 571 ----------------------YKYDAEFDMLSRFPPKMIATEAA--------RADKFVR 630

Query: 301 SSQVEPRDLTLKFLGPTASSFGNSYLYSGGSVERGLDRGHNQVSDKGFPTTRPQIEVRVQ 360
             +++ +     F   T +           +V+  L    N     G    R Q     Q
Sbjct: 631 GLRLDIQGFVGAFQPATHADALRL------AVDFSLQERANSSKVAGGEFRRFQ-----Q 690

Query: 361 RGADRREAGRMREGHMDAFEKYVGYALGVPTYLIYRKKKY---IDYSGMSFKEVFRSLKS 420
           +  +  EA R +       + ++G  L   T + ++ ++    +D   M   E  ++  +
Sbjct: 691 KPFEAGEAARGKSLCTTCGKHHLGRCL-FRTRICFKCRQEGHTVDTCPMRLTENVQNQGA 750

Query: 421 SLT---SIEALQYAEYAERADTVVTGTLLVLGHYALILFDSGSLHSFISSAFVLHARLEV 480
                 +I A    + AERA TVVTGTL VLGHYAL+LFDSGS HSFI SAFVLHA LEV
Sbjct: 751 GAPHQGTIFATNKTD-AERAGTVVTGTLPVLGHYALVLFDSGSSHSFIFSAFVLHACLEV 810

Query: 481 EPLYHVLLVSTPSGESLLSTEKVKACQIEIVGHVIEVTLLVLDMYHFDVILVMDWLAANH 514
           EPL+HVL VSTPSGE +LS EKVKACQIEI GHV EVTLLVLDM  FDVIL MDWL ANH
Sbjct: 811 EPLHHVLSVSTPSGECMLSMEKVKACQIEIAGHVFEVTLLVLDMLDFDVILGMDWLVANH 828

[Close]

BLAST of IVF0013650.2 vs. NCBI nr
Match: KAA0066274.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 325 bits (834), Expect = 8.54e-97
Identity = 201/335 (60.00%), Postives = 216/335 (64.48%), Query Frame = 0


Query: 1   MHTTQSRQKSYADVRRRDLEFDVGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERI 60
           M T QSRQKSYADVRRRDLEFDVGDKVF KVAPMKGVLRFERRGKLSPRFVGPFEILERI
Sbjct: 682 MLTAQSRQKSYADVRRRDLEFDVGDKVFFKVAPMKGVLRFERRGKLSPRFVGPFEILERI 741

Query: 61  GLVAYRLALPPSLSTVHDVFHVSMLRKYVADPSHVVDYKPLEIDENLSYTEQPLRCWLER 120
           G VAYRLALPPSLSTVHDVFHVSMLRKYV DPS VVDY+PLEIDENLSYTEQP+      
Sbjct: 742 GPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSQVVDYEPLEIDENLSYTEQPVEV---- 801

Query: 121 PPPPSPSLLSSAPAGRHPFSPSPSLYGGTVSVSVV-----GNLTTPAFVRRGPSISELPL 180
                  L       R+   P   +      V         ++ +P FVRRGPSIS+LPL
Sbjct: 802 -------LAREVKMLRNREIPLVKVLWQNHRVEEATWEREDDMRSP-FVRRGPSISKLPL 861

Query: 181 GLTHPDAAVRPSSNRVRRRPVALRRVEAEPVVGLLQAAKRPRRRIEDRRRGCPDFKLTRP 240
            LTHPDAAVRPSS+RVRRRPVALRRVEAEPVVGL +    P   + +RRR      +   
Sbjct: 862 DLTHPDAAVRPSSHRVRRRPVALRRVEAEPVVGLSKPRSVP---VVERRRQ--SLVVAPS 921

Query: 241 ETCFQFDPRFKLQIRVEPKTEPSHEPSQAEDRAEPRAESSQVEPRDLTLKFLGPTASSFG 300
           +T F                                  S     RDLTLKFLGP ASSFG
Sbjct: 922 KTGFYL--------------------------------SFLEGSRDLTLKFLGPMASSFG 967

Query: 301 NSYLYSGGSVERGLDRGHNQVSDKGFPTTRPQIEV 330
           NS LYSGGSVE+    GHNQVS KGF TT P IE 
Sbjct: 982 NSSLYSGGSVEQDSIEGHNQVSGKGFSTTGPWIEA 967

[Close]

BLAST of IVF0013650.2 vs. TAIR 10
Match: AT4G23100.1 (glutamate-cysteine ligase )

HSP 1 Score: 47.4 bits (111), Expect = 4.1e-05
Identity = 20/32 (62.50%), Postives = 25/32 (78.12%), Query Frame = 0


Query: 352 FEKYVGYALGVPTYLIYRKKKYIDYSGMSFKE 384
           FE+YV YAL VP Y  YRK KYID +GM+F++
Sbjct: 325 FEQYVDYALDVPMYFAYRKNKYIDCTGMTFRQ 356

[Close]

BLAST of IVF0013650.2 vs. TAIR 10
Match: AT4G23100.2 (glutamate-cysteine ligase )

HSP 1 Score: 47.4 bits (111), Expect = 4.1e-05
Identity = 20/32 (62.50%), Postives = 25/32 (78.12%), Query Frame = 0


Query: 352 FEKYVGYALGVPTYLIYRKKKYIDYSGMSFKE 384
           FE+YV YAL VP Y  YRK KYID +GM+F++
Sbjct: 325 FEQYVDYALDVPMYFAYRKNKYIDCTGMTFRQ 356

[Close]

BLAST of IVF0013650.2 vs. TAIR 10
Match: AT4G23100.3 (glutamate-cysteine ligase )

HSP 1 Score: 47.4 bits (111), Expect = 4.1e-05
Identity = 20/32 (62.50%), Postives = 25/32 (78.12%), Query Frame = 0


Query: 352 FEKYVGYALGVPTYLIYRKKKYIDYSGMSFKE 384
           FE+YV YAL VP Y  YRK KYID +GM+F++
Sbjct: 325 FEQYVDYALDVPMYFAYRKNKYIDCTGMTFRQ 356

The following BLAST results are available for this feature:

BLAST of IVF0013650.2 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q1W2L8	2.3e-05	40.28	Glutamate--cysteine ligase, chloroplastic OS=Nicotiana tabacum OX=4097 GN=GSH1 P...	[more]
Q9UR07	4.0e-05	36.67	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	4.0e-05	36.67	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	4.0e-05	36.67	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	4.0e-05	36.67	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of IVF0013650.2 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VIM5	9.5e-135	65.90	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold38G001090 PE...	[more]
A0A5A7SYA6	4.8e-94	73.99	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold69G00770 PE=...	[more]
A0A5D3DV03	2.7e-89	47.82	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold478G00240 PE...	[more]
A0A5A7SSB1	3.7e-86	46.42	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold452G00050 PE...	[more]
A0A5A7UPE4	1.1e-85	64.55	Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]

BLAST of IVF0013650.2 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0067060.1	3.82e-167	65.90	pol protein [Cucumis melo var. makuwa]	[more]
KAA0036202.1	9.10e-109	71.58	pol protein [Cucumis melo var. makuwa]	[more]
TYK27130.1	5.58e-101	46.88	pol protein [Cucumis melo var. makuwa]	[more]
KAA0032109.1	6.31e-97	45.52	pol protein [Cucumis melo var. makuwa]	[more]
KAA0066274.1	8.54e-97	60.00	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of IVF0013650.2 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23100.1	4.1e-05	62.50	glutamate-cysteine ligase	[more]
AT4G23100.2	4.1e-05	62.50	glutamate-cysteine ligase	[more]
AT4G23100.3	4.1e-05	62.50	glutamate-cysteine ligase	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021109	Aspartic peptidase domain superfamily	GENE3D	2.40.70.10	Acid Proteases	coord: 396..514 e-value: 6.2E-15 score: 57.1
IPR021109	Aspartic peptidase domain superfamily	SUPERFAMILY	50630	Acid proteases	coord: 410..511
None	No IPR available	PFAM	PF08284	RVP_2	coord: 401..513 e-value: 2.8E-33 score: 114.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 250..278
None	No IPR available	PANTHER	PTHR46148:SF21	DOMAIN PROTEIN, PUTATIVE-RELATED	coord: 3..115
None	No IPR available	PANTHER	PTHR46148	FAMILY NOT NAMED	coord: 3..115
None	No IPR available	CDD	cd00303	retropepsin_like	coord: 414..504 e-value: 1.12281E-16 score: 73.1396

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
IVF0013650	IVF0013650	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0013650.2-exon	IVF0013650.2-exon-chr10:13294369..13294704	exon
IVF0013650.2-exon	IVF0013650.2-exon-chr10:13294843..13294905	exon
IVF0013650.2-exon	IVF0013650.2-exon-chr10:13295512..13295605	exon
IVF0013650.2-exon	IVF0013650.2-exon-chr10:13300099..13300163	exon
IVF0013650.2-exon	IVF0013650.2-exon-chr10:13301047..13301129	exon
IVF0013650.2-exon	IVF0013650.2-exon-chr10:13301213..13301280	exon
IVF0013650.2-exon	IVF0013650.2-exon-chr10:13301497..13301973	exon
IVF0013650.2-exon	IVF0013650.2-exon-chr10:13302572..13302930	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0013650.2-cds	IVF0013650.2-cds-chr10:13294369..13294704	CDS
IVF0013650.2-cds	IVF0013650.2-cds-chr10:13294843..13294905	CDS
IVF0013650.2-cds	IVF0013650.2-cds-chr10:13295512..13295605	CDS
IVF0013650.2-cds	IVF0013650.2-cds-chr10:13300099..13300163	CDS
IVF0013650.2-cds	IVF0013650.2-cds-chr10:13301047..13301129	CDS
IVF0013650.2-cds	IVF0013650.2-cds-chr10:13301213..13301280	CDS
IVF0013650.2-cds	IVF0013650.2-cds-chr10:13301497..13301973	CDS
IVF0013650.2-cds	IVF0013650.2-cds-chr10:13302572..13302930	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
IVF0013650.2	IVF0013650.2-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090304	nucleic acid metabolic process
molecular_function	GO:0005488	binding
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0016740	transferase activity