IVF0012276.4 (mRNA) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTAATTTTTATGATCCAATAAAGTAAGATAAAATTCTAAGAAATAAAAAATCGAAATTTCCATCTCCTCCGCCCACCGTCCCGATCTAACCTTTCATGGCAAGATTTAGGGTTTAAGATTTCTTCTACGTTCTGCGTCCAATTTCTCCCAATTTCTTCGATTTCAAAACATATCCGCCCCTTCACGCTTGTTAATTACTCCAATATTTGCATTCAATTCAAGTTCCAGTGTATATACAATTCCGCCAGACGCTGAAAACATGACTGAGGTATTAATTCCTCCAAATTCTTTTTTGTTTTCCCGCTAATTCTTTGTTGATATTTTGTTTTGGTAAGAGGGTTGAGAGGAAAATCATTTGCTTATTTATCTTTTTACTTTTTTGCTTCTTTCATTAGTTTTGGAAAAGTATGTTTGATGTATAGTTCTTGAAAGCTTGTGCATTTGGAAATTGAAATATTGCTTCACTTTTATGTCGGTTGTCATGCCAGTTCTCATTTCAATATTTGGTGCAAGTCGTAGTTTTTTCATCTTTCATGTTTACATTCATATGTACATATGTTTTTGTACATATTCACCTCTCGTTATGAACATTTTTATTTCGAATTTTGTCTGCGTTTTGATTCACTTTTGGGAGTGAAATCTATGATCTTTCTTTTTTAATATATTCTGTGTTTGGAGTTCTGCTGTGTGGTTAAACATTTATTTTAGTTAGAATGATTATCCATGACAGATAGAATGCTAACAATTCGTTTGTTTGTTTGTTTTTTTTAAACCCCATTCCCAGTATTGGGTTAGTCAAGGTAACAAATGGTGCGACTTTTGCAAAATATTTATTTCAAATAATCCTTCCACAATCCGTAATCATGAGCTCGGTCAACGTCATAAGGACAATGTTACCAAAAAGCTTGCAAACATGAGAAAAGAGAACGCTGCCAAGGACAAAGAACAAAAGGAAGCCGTACGTGCCATTGAGCAGATTGAGGCGGTAAGTGAACAAACATTCTATTCCTCCTATCTTAGTTGCTGATTAAGTACTAAGAAGTCATGGGTTCAATCCATGGTGACCACTTACCTAGGGACGAGCTATCTTGATACTCAAATATTGTAGGGTCAGGTATATTGTCCCGTGAGATTAGTTGAGGTATGTGTAATTTGGTCCGGACACTCACGGATATATAAAAAAAAAAAACAAAGTACTAAGTATATTAGTATGCATCTGTTTCAACTTTCAAATCTTGGTGGCTTGGTTCAATTCAGAAATATTTAAGTAAGCCTTCATGTACTAAGATTGAAATCTCATGATAACTTTATTGTAGATAAGGATAGACATAGAGTTGAACCATCTGGTTTCTTTGCATCAGTACTGCAAAGGAACCGAGCTGTCTGCATGCATCCTTAGTCTTTAGCTCAACAAAGGTTAGCTTGTTGTTGAATAAGTGAATTGTGAAAAATGATTCCAGTTTCTGCTTTGAACTTGACCTGTTAATTTCGTGTAGTTTCCCACAGCGTTCTTAAATTCTAACGGTTGTATCTTGATTATTAATTTGAGTGTAGAATGTGGGCTTTTGAGTCTGACAAAAATGCGTAGTAAGAATAGATAGTAATGCCCTACTATAACTAATTTTTCACTATTGATTTTTCTTACTAGAGTGAGAATTTTCTTGAGTATCTTATCAAAATAACAAAAGGATCCTGTCTGAGCATGGTTGTCAACAGAACTAGTATGCCAACTCTGGAAACTTTCTTATTTATCAAGTTCGTTTTTTTTTATGGTGTGCAGGGGTGTGTCATTTTATGCTTTTTATGGAGTGATCGTAACAGTCAAATGTTTAGGGGAGTGGATAAGGATCCTTCGGACCTCATTCATTTTAATAGTTTTTTGCGGGCTTTGATCTCAAAGATATTTTGTAATTTTCTATAGGTTTGATATTTGCATGGTTGAAGTCCCTTCTTCTAATGGGAGTTACTTTTTTTGTGGGCATTTTTTTTACTAATGCACGTGTATTCTTTCATATCCAACAGTTTTGTGTTAGTGTGATTGTGATATGGATAGTTTTAACGTAGGAGTAAGTGTCATAATTTTTAAGTTCACACAACAGGGGTCAGAGTCCTGAGTGTATGGCCTCGGTATATTCATTATGTAGTAGCAAGAAGAATGTTTTGCTTAATCCATGAACTTCTATTTCTTTACATTCTTAATCCCATTTTTTTTTTCTCAATTCTGCAGAAAGCCAATCGTAGTTACCAGAAGGACATAGCAAATTTCCGGGAAGCTAGAGATTCTCATGCACTTCCTGTTGATGTTCAAGAAACTGGTGACGAGAGTAAGTACTGCAGAGTAGCAATTTGTTTGTTTTAATTTTTTAGAACTGAAGGACATAGATGTACAACGTGCAGAACAAATCCTTGTTCAAGTAAGGTTGCCAATTTATTCGTTTTAAGAAACATGCTTCTGTAACCCTCTCCAGAACTGTCTGAAAATAAATGCCTTGTGATTGATTCGCATTTGAGCATCTATTTGACAGTGCTCTGAGAATATCATTTAATTGATTTTTGTAACAACCTGATCTACTTGAGTGAACGTTCTATGTAATTGGACATAATAGTACGTGCACATTTATTATCATCTTGATTGTATTCTTCAAACTGATACAGCTCTCAATGATGACAGAGTGGGAGCTTGACAGCACTTCGGGCTATTATTATAATGAAAGCAATGGTTTCTACTATGATTCAAATTCTGGCTTCTACTACTCTGATGCCATTGGTAATGATTCCTTTTCAAGTTTTAGCTTCTCTCTTTCTTTTATGTTTTAGAATACGTGTGCTTGTTGCTTACCAAGTTAGTTGTCTGCAACAGGCAAGTGGGTAACACAGGAAGAGGCACATTCTTCGCCTCAGTTCTTTTTGGACTCCAAACATAAGAAACCAATTTTAGGAATGCCATCATCAGCCTCTGCAAGTACAGCTATAAAAGACAAAAATGTGGATAAAGCGGAAGGTGGTCCTCCACCTGGGTTGGTTGTTTCAGCTTCTTTAAACCCGAAGCGATCTGTTAAAGGTGCCCCTTCATCAATTGCTGTTGGTAAGAGGAAGAGGCCAGATGAGAAGCAAAAGGCCATATCTGAAGAAGAAAAGCTGCACTCAAAGCAAGGGAAGCTGCGAAGAAGAGGGTTGAAAAGAGGGAGAAGCCACTTCTTGGCCTTTACAGATTGCCTTGAAATAGGCTGTTGCTCTCAAGTAAATTTCTCTACCATCTCAAGTTTGCAACATTCATTGTCTCCAACCTGTAAACTGATTTTTCTCTTTATGATTAATTAGATTGCTTAACTTGAGCTGGAAGAATATTACTTTATGAAACTTGTTCTCTATCACCCGTTATTGTTATAATCTTGCGTTGCTTTATTGTGGGGTTTACATGCATACATCACCAGGAATATGTGGGGATGATATATTCTAAAAATCGGCCTTGATCCATGTCTGCTTGGTTACTGAAAAGATGAGAAACATTTGAGGGAAGAAATCCATAGCCAATCAACTTGAGGGCATGAACGGATCTTGCTTTTATTGTGGATCTGTTTGTTTACGGTTACAATTGAGCCAGATTCATGTACTGTCAAAGGCTATGTGAAGGGAAACTCCCTAGTGTCTATTTGTCAGATGGGACAGTATCTCCCTGTTCAGAAACCAAGGCTTATACAAGGTGAAATTAAGAGGAAAACGGAAGATACTACTTCGTATATTGTATTTAGAGCAGTAACATTTGTGATTAATACTTTTCAGCCCTTCCTTGGTTTTTCTCTCTATTCACAGGATAACTGAGAGCATGAATCCTAGACGAACTAATTGTTTCTCAGCTCATCCATCACAAAAGGACTTCCAACTGGTTTGTGTTGACATGTTGTACTATAGAGTAATGTCAGTCATCAACCCCTAGTTTTATTTCTGCATTTTTCATTTCTGTTATAGTAAACTCCTTCCCCTTACTTTCAAAGCTTTGCATTTGTGTTGTAATTTGCAAGCGAGTCTCTCATGCTTTTATCTTTCATACTAATTCTCATTCAGGTTACAATGTAAAGCACCA TTTAATTTTTATGATCCAATAAAGTAAGATAAAATTCTAAGAAATAAAAAATCGAAATTTCCATCTCCTCCGCCCACCGTCCCGATCTAACCTTTCATGGCAAGATTTAGGGTTTAAGATTTCTTCTACGTTCTGCGTCCAATTTCTCCCAATTTCTTCGATTTCAAAACATATCCGCCCCTTCACGCTTGTTAATTACTCCAATATTTGCATTCAATTCAAGTTCCAGTGTATATACAATTCCGCCAGACGCTGAAAACATGACTGAGTATTGGGTTAGTCAAGGTAACAAATGGTGCGACTTTTGCAAAATATTTATTTCAAATAATCCTTCCACAATCCGTAATCATGAGCTCGGTCAACGTCATAAGGACAATGTTACCAAAAAGCTTGCAAACATGAGAAAAGAGAACGCTGCCAAGGACAAAGAACAAAAGGAAGCCGTACGTGCCATTGAGCAGATTGAGGCGAAAGCCAATCGTAGTTACCAGAAGGACATAGCAAATTTCCGGGAAGCTAGAGATTCTCATGCACTTCCTGTTGATGTTCAAGAAACTGGTGACGAGAAGTGGGAGCTTGACAGCACTTCGGGCTATTATTATAATGAAAGCAATGGTTTCTACTATGATTCAAATTCTGGCTTCTACTACTCTGATGCCATTGGCAAGTGGGTAACACAGGAAGAGGCACATTCTTCGCCTCAGTTCTTTTTGGACTCCAAACATAAGAAACCAATTTTAGGAATGCCATCATCAGCCTCTGCAAGTACAGCTATAAAAGACAAAAATGTGGATAAAGCGGAAGGTGGTCCTCCACCTGGGTTGGTTGTTTCAGCTTCTTTAAACCCGAAGCGATCTGTTAAAGGTGCCCCTTCATCAATTGCTGTTGGTAAGAGGAAGAGGCCAGATGAGAAGCAAAAGGCCATATCTGAAGAAGAAAAGCTGCACTCAAAGCAAGGGAAGCTGCGAAGAAGAGGGTTGAAAAGAGGGAGAAGCCACTTCTTGGCCTTTACAGATTGCCTTGAAATAGGCTGTTGCTCTCAAGTAAATTTCTCTACCATCTCAAGTTTGCAACATTCATTGTCTCCAACCTGTAAACTGATTTTTCTCTTTATGATTAATTAGATTGCTTAACTTGAGCTGGAAGAATATTACTTTATGAAACTTGTTCTCTATCACCCGTTATTGTTATAATCTTGCGTTGCTTTATTGTGGGGTTTACATGCATACATCACCAGGAATATGTGGGGATGATATATTCTAAAAATCGGCCTTGATCCATGTCTGCTTGGTTACTGAAAAGATGAGAAACATTTGAGGGAAGAAATCCATAGCCAATCAACTTGAGGGCATGAACGGATCTTGCTTTTATTGTGGATCTGTTTGTTTACGGTTACAATTGAGCCAGATTCATGTACTGTCAAAGGCTATGTGAAGGGAAACTCCCTAGTGTCTATTTGTCAGATGGGACAGTATCTCCCTGTTCAGAAACCAAGGCTTATACAAGGTGAAATTAAGAGGAAAACGGAAGATACTACTTCGTATATTGTATTTAGAGCAGTAACATTTGTGATTAATACTTTTCAGCCCTTCCTTGGTTTTTCTCTCTATTCACAGGATAACTGAGAGCATGAATCCTAGACGAACTAATTGTTTCTCAGCTCATCCATCACAAAAGGACTTCCAACTGGTTTGTGTTGACATGTTGTACTATAGAGTAATGTCAGTCATCAACCCCTAGTTTTATTTCTGCATTTTTCATTTCTGTTATAGTAAACTCCTTCCCCTTACTTTCAAAGCTTTGCATTTGTGTTGTAATTTGCAAGCGAGTCTCTCATGCTTTTATCTTTCATACTAATTCTCATTCAGGTTACAATGTAAAGCACCA ATGACTGAGTATTGGGTTAGTCAAGGTAACAAATGGTGCGACTTTTGCAAAATATTTATTTCAAATAATCCTTCCACAATCCGTAATCATGAGCTCGGTCAACGTCATAAGGACAATGTTACCAAAAAGCTTGCAAACATGAGAAAAGAGAACGCTGCCAAGGACAAAGAACAAAAGGAAGCCGTACGTGCCATTGAGCAGATTGAGGCGAAAGCCAATCGTAGTTACCAGAAGGACATAGCAAATTTCCGGGAAGCTAGAGATTCTCATGCACTTCCTGTTGATGTTCAAGAAACTGGTGACGAGAAGTGGGAGCTTGACAGCACTTCGGGCTATTATTATAATGAAAGCAATGGTTTCTACTATGATTCAAATTCTGGCTTCTACTACTCTGATGCCATTGGCAAGTGGGTAACACAGGAAGAGGCACATTCTTCGCCTCAGTTCTTTTTGGACTCCAAACATAAGAAACCAATTTTAGGAATGCCATCATCAGCCTCTGCAAGTACAGCTATAAAAGACAAAAATGTGGATAAAGCGGAAGGTGGTCCTCCACCTGGGTTGGTTGTTTCAGCTTCTTTAAACCCGAAGCGATCTGTTAAAGGTGCCCCTTCATCAATTGCTGTTGGTAAGAGGAAGAGGCCAGATGAGAAGCAAAAGGCCATATCTGAAGAAGAAAAGCTGCACTCAAAGCAAGGGAAGCTGCGAAGAAGAGGGTTGAAAAGAGGGAGAAGCCACTTCTTGGCCTTTACAGATTGCCTTGAAATAGGCTGTTGCTCTCAAGTAAATTTCTCTACCATCTCAAGTTTGCAACATTCATTGTCTCCAACCTGTAAACTGATTTTTCTCTTTATGATTAATTAG MTEYWVSQGNKWCDFCKIFISNNPSTIRNHELGQRHKDNVTKKLANMRKENAAKDKEQKEAVRAIEQIEAKANRSYQKDIANFREARDSHALPVDVQETGDEKWELDSTSGYYYNESNGFYYDSNSGFYYSDAIGKWVTQEEAHSSPQFFLDSKHKKPILGMPSSASASTAIKDKNVDKAEGGPPPGLVVSASLNPKRSVKGAPSSIAVGKRKRPDEKQKAISEEEKLHSKQGKLRRRGLKRGRSHFLAFTDCLEIGCCSQVNFSTISSLQHSLSPTCKLIFLFMIN Homology
BLAST of IVF0012276.4 vs. ExPASy Swiss-Prot
Match: Q7XA66 (Zinc finger protein ZOP1 OS=Arabidopsis thaliana OX=3702 GN=ZOP1 PE=1 SV=1) HSP 1 Score: 228.4 bits (581), Expect = 1.0e-58 Identity = 129/241 (53.53%), Postives = 170/241 (70.54%), Query Frame = 0
BLAST of IVF0012276.4 vs. ExPASy Swiss-Prot
Match: O75554 (WW domain-binding protein 4 OS=Homo sapiens OX=9606 GN=WBP4 PE=1 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 6.1e-11 Identity = 30/80 (37.50%), Postives = 57/80 (71.25%), Query Frame = 0
BLAST of IVF0012276.4 vs. ExPASy Swiss-Prot
Match: Q61048 (WW domain-binding protein 4 OS=Mus musculus OX=10090 GN=Wbp4 PE=1 SV=4) HSP 1 Score: 69.7 bits (169), Expect = 6.1e-11 Identity = 34/98 (34.69%), Postives = 63/98 (64.29%), Query Frame = 0
BLAST of IVF0012276.4 vs. ExPASy Swiss-Prot
Match: Q5HZF2 (WW domain-binding protein 4 OS=Rattus norvegicus OX=10116 GN=Wbp4 PE=2 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 6.1e-11 Identity = 30/80 (37.50%), Postives = 57/80 (71.25%), Query Frame = 0
BLAST of IVF0012276.4 vs. ExPASy Swiss-Prot
Match: Q5F457 (WW domain-binding protein 4 OS=Gallus gallus OX=9031 GN=WBP4 PE=2 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 1.4e-10 Identity = 31/80 (38.75%), Postives = 54/80 (67.50%), Query Frame = 0
BLAST of IVF0012276.4 vs. ExPASy TrEMBL
Match: A0A1S3BZS9 (uncharacterized protein C18H10.07 OS=Cucumis melo OX=3656 GN=LOC103495224 PE=4 SV=1) HSP 1 Score: 445.3 bits (1144), Expect = 2.0e-121 Identity = 228/242 (94.21%), Postives = 234/242 (96.69%), Query Frame = 0
BLAST of IVF0012276.4 vs. ExPASy TrEMBL
Match: A0A0A0K4T4 (Matrin-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G074280 PE=4 SV=1) HSP 1 Score: 436.8 bits (1122), Expect = 7.0e-119 Identity = 223/242 (92.15%), Postives = 230/242 (95.04%), Query Frame = 0
BLAST of IVF0012276.4 vs. ExPASy TrEMBL
Match: A0A6J1GM42 (zinc finger protein ZOP1 OS=Cucurbita moschata OX=3662 GN=LOC111455563 PE=4 SV=1) HSP 1 Score: 403.3 bits (1035), Expect = 8.6e-109 Identity = 207/242 (85.54%), Postives = 222/242 (91.74%), Query Frame = 0
BLAST of IVF0012276.4 vs. ExPASy TrEMBL
Match: A0A6J1I626 (zinc finger protein ZOP1 OS=Cucurbita maxima OX=3661 GN=LOC111471024 PE=4 SV=1) HSP 1 Score: 401.4 bits (1030), Expect = 3.3e-108 Identity = 206/242 (85.12%), Postives = 221/242 (91.32%), Query Frame = 0
BLAST of IVF0012276.4 vs. ExPASy TrEMBL
Match: A0A6J1C616 (zinc finger protein ZOP1 OS=Momordica charantia OX=3673 GN=LOC111007702 PE=4 SV=1) HSP 1 Score: 401.4 bits (1030), Expect = 3.3e-108 Identity = 203/242 (83.88%), Postives = 219/242 (90.50%), Query Frame = 0
BLAST of IVF0012276.4 vs. NCBI nr
Match: XP_008454929.1 (PREDICTED: uncharacterized protein C18H10.07 [Cucumis melo]) HSP 1 Score: 449 bits (1154), Expect = 1.86e-157 Identity = 227/227 (100.00%), Postives = 227/227 (100.00%), Query Frame = 0
BLAST of IVF0012276.4 vs. NCBI nr
Match: XP_031744713.1 (uncharacterized protein LOC101207712 isoform X3 [Cucumis sativus] >KGN43944.1 hypothetical protein Csa_017045 [Cucumis sativus]) HSP 1 Score: 440 bits (1132), Expect = 4.17e-154 Identity = 222/227 (97.80%), Postives = 223/227 (98.24%), Query Frame = 0
BLAST of IVF0012276.4 vs. NCBI nr
Match: XP_038888245.1 (zinc finger protein ZOP1 [Benincasa hispida] >XP_038888246.1 zinc finger protein ZOP1 [Benincasa hispida] >XP_038888247.1 zinc finger protein ZOP1 [Benincasa hispida]) HSP 1 Score: 420 bits (1080), Expect = 3.46e-146 Identity = 210/227 (92.51%), Postives = 219/227 (96.48%), Query Frame = 0
BLAST of IVF0012276.4 vs. NCBI nr
Match: XP_022953041.1 (zinc finger protein ZOP1 [Cucurbita moschata] >XP_022953042.1 zinc finger protein ZOP1 [Cucurbita moschata]) HSP 1 Score: 407 bits (1046), Expect = 5.01e-141 Identity = 206/227 (90.75%), Postives = 215/227 (94.71%), Query Frame = 0
BLAST of IVF0012276.4 vs. NCBI nr
Match: XP_022972471.1 (zinc finger protein ZOP1 [Cucurbita maxima] >XP_022972472.1 zinc finger protein ZOP1 [Cucurbita maxima] >XP_023511693.1 zinc finger protein ZOP1 [Cucurbita pepo subsp. pepo] >XP_023511694.1 zinc finger protein ZOP1 [Cucurbita pepo subsp. pepo] >KAG7011666.1 Zinc finger protein ZOP1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 405 bits (1041), Expect = 2.89e-140 Identity = 205/227 (90.31%), Postives = 214/227 (94.27%), Query Frame = 0
BLAST of IVF0012276.4 vs. TAIR 10
Match: AT1G49590.1 (C2H2 and C2HC zinc fingers superfamily protein ) HSP 1 Score: 228.4 bits (581), Expect = 7.3e-60 Identity = 129/241 (53.53%), Postives = 170/241 (70.54%), Query Frame = 0
BLAST of IVF0012276.4 vs. TAIR 10
Match: AT1G49590.2 (C2H2 and C2HC zinc fingers superfamily protein ) HSP 1 Score: 123.6 bits (309), Expect = 2.5e-28 Identity = 58/95 (61.05%), Postives = 77/95 (81.05%), Query Frame = 0
BLAST of IVF0012276.4 vs. TAIR 10
Match: AT1G49590.3 (C2H2 and C2HC zinc fingers superfamily protein ) HSP 1 Score: 123.6 bits (309), Expect = 2.5e-28 Identity = 58/95 (61.05%), Postives = 77/95 (81.05%), Query Frame = 0
BLAST of IVF0012276.4 vs. TAIR 10
Match: AT3G54230.1 (suppressor of abi3-5 ) HSP 1 Score: 42.0 bits (97), Expect = 9.6e-04 Identity = 41/142 (28.87%), Postives = 64/142 (45.07%), Query Frame = 0
BLAST of IVF0012276.4 vs. TAIR 10
Match: AT3G54230.2 (suppressor of abi3-5 ) HSP 1 Score: 42.0 bits (97), Expect = 9.6e-04 Identity = 41/142 (28.87%), Postives = 64/142 (45.07%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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