IVF0012096.1 (mRNA) Melon (IVF77) v1

Overview


Name	IVF0012096.1
Type	mRNA
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Protein of unknown function (DUF630 and DUF632)
Location	chr05: 9536703 .. 9537116 (-)
Sequence length	279
RNA-Seq Expression	IVF0012096.1
Synteny	IVF0012096.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATAGATGTCATTACTTTTTATTCATCCAAAGCCCCGATGTCATTACTTTTTATTCATTCAAAGCCCCCTTGTATATTACAGGCCTCTTATCCTTGCTTGGTTTCACATTTTGGTTATGTATAGAAACTATATAAGTGTTCGGTGTTTTTGTTGGTTAACATATTCTATAAAAATTCTTTTCAAGCTAGAGAAGGTGTGAAGATTGAACATGAAAAAAAATTGTCATTGTTGTAGAGTCAGGAATACAAGGGGGAGGATGAAAGCAAGCTAGATAAGACGAAGGCTGCTATAACTAGACTGCAGTCATTAATTATTGTCACATCCCAAGCTGTCAATACAACTTCTACTGCCATAGTTGGACTAAGAAATTCGGATCTCATTCCTCAGCTTGTTGAACTTTGCCATGGGTAA

mRNA sequence

ATGATAGATGTCATTACTTTTTATTCATCCAAAGCCCCGATGTCATTACTTTTTATTCATTCAAAGCCCCCTTGTATATTACAGGCCTCTTATCCTTGCTTGAGTCAGGAATACAAGGGGGAGGATGAAAGCAAGCTAGATAAGACGAAGGCTGCTATAACTAGACTGCAGTCATTAATTATTGTCACATCCCAAGCTGTCAATACAACTTCTACTGCCATAGTTGGACTAAGAAATTCGGATCTCATTCCTCAGCTTGTTGAACTTTGCCATGGGTAA

Coding sequence (CDS)

ATGATAGATGTCATTACTTTTTATTCATCCAAAGCCCCGATGTCATTACTTTTTATTCATTCAAAGCCCCCTTGTATATTACAGGCCTCTTATCCTTGCTTGAGTCAGGAATACAAGGGGGAGGATGAAAGCAAGCTAGATAAGACGAAGGCTGCTATAACTAGACTGCAGTCATTAATTATTGTCACATCCCAAGCTGTCAATACAACTTCTACTGCCATAGTTGGACTAAGAAATTCGGATCTCATTCCTCAGCTTGTTGAACTTTGCCATGGGTAA

Protein sequence

MIDVITFYSSKAPMSLLFIHSKPPCILQASYPCLSQEYKGEDESKLDKTKAAITRLQSLIIVTSQAVNTTSTAIVGLRNSDLIPQLVELCHG

Homology

[Close]

BLAST of IVF0012096.1 vs. ExPASy Swiss-Prot
Match: Q93YU8 (Nitrate regulatory gene2 protein OS=Arabidopsis thaliana OX=3702 GN=NRG2 PE=1 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 7.9e-21
Identity = 50/58 (86.21%), Postives = 56/58 (96.55%), Query Frame = 0


Query: 35  SQEYKGEDESKLDKTKAAITRLQSLIIVTSQAVNTTSTAIVGLRNSDLIPQLVELCHG 93
           SQEYKGEDE+KLDKTKA+ITRLQSLIIVTSQAV TTSTAI+ LR++DL+PQLVELCHG
Sbjct: 477 SQEYKGEDEAKLDKTKASITRLQSLIIVTSQAVTTTSTAIIRLRDTDLVPQLVELCHG 534

[Close]

BLAST of IVF0012096.1 vs. ExPASy Swiss-Prot
Match: Q9AQW1 (Protein ROLLING AND ERECT LEAF 2 OS=Oryza sativa subsp. japonica OX=39947 GN=REL2 PE=2 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 4.2e-14
Identity = 46/80 (57.50%), Postives = 56/80 (70.00%), Query Frame = 0


Query: 11  KAPMSLLFIHSKPPCILQASYPCLSQEYKGEDESKLDKTKAAITRLQSLIIVTSQAVNTT 70
           KA  S+   H K    LQ      S EY+G D +KLDKTKA+I +LQSLIIVTSQA  TT
Sbjct: 427 KARESVKIEHEKKLSTLQ------SLEYRGRDSTKLDKTKASINKLQSLIIVTSQAATTT 486

Query: 71  STAIVGLRNSDLIPQLVELC 91
           S+AIV +R+++L PQLVELC
Sbjct: 487 SSAIVRVRDNELAPQLVELC 500

[Close]

BLAST of IVF0012096.1 vs. ExPASy Swiss-Prot
Match: A0A178VBJ0 (Protein ALTERED PHOSPHATE STARVATION RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=APSR1 PE=2 SV=1)

HSP 1 Score: 44.7 bits (104), Expect = 6.7e-04
Identity = 23/56 (41.07%), Postives = 35/56 (62.50%), Query Frame = 0


Query: 37  EYKGEDESKLDKTKAAITRLQSLIIVTSQAVNTTSTAIVGLRNSDLIPQLVELCHG 93
           E K  +  K +K K  + +L+S + V+SQA+ + S  I+ LR ++L PQLVEL  G
Sbjct: 328 EMKRAEYVKTEKAKKDVEKLESQLSVSSQAIQSASNEIIKLRETELYPQLVELVKG 383

[Close]

BLAST of IVF0012096.1 vs. ExPASy TrEMBL
Match: A0A5A7TND8 (BZIP protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G004480 PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 5.7e-22
Identity = 64/82 (78.05%), Postives = 66/82 (80.49%), Query Frame = 0


Query: 11  KAPMSLLFIHSKPPCILQASYPCLSQEYKGEDESKLDKTKAAITRLQSLIIVTSQAVNTT 70
           KA   +   H K   +LQ      SQEYKGEDESKLDKTKAAITRLQSLIIVTSQAVNTT
Sbjct: 39  KAREGVKIEHEKKLSLLQ------SQEYKGEDESKLDKTKAAITRLQSLIIVTSQAVNTT 98

Query: 71  STAIVGLRNSDLIPQLVELCHG 93
           STAIVGLRNSDLIPQLVELCHG
Sbjct: 99  STAIVGLRNSDLIPQLVELCHG 114

[Close]

BLAST of IVF0012096.1 vs. ExPASy TrEMBL
Match: A0A5A7TM53 (Histone-lysine N-methyltransferase SETD2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2741G00230 PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 5.7e-22
Identity = 64/82 (78.05%), Postives = 66/82 (80.49%), Query Frame = 0


Query: 11  KAPMSLLFIHSKPPCILQASYPCLSQEYKGEDESKLDKTKAAITRLQSLIIVTSQAVNTT 70
           KA   +   H K   +LQ      SQEYKGEDESKLDKTKAAITRLQSLIIVTSQAVNTT
Sbjct: 39  KAREGVKIEHEKKLSLLQ------SQEYKGEDESKLDKTKAAITRLQSLIIVTSQAVNTT 98

Query: 71  STAIVGLRNSDLIPQLVELCHG 93
           STAIVGLRNSDLIPQLVELCHG
Sbjct: 99  STAIVGLRNSDLIPQLVELCHG 114

[Close]

BLAST of IVF0012096.1 vs. ExPASy TrEMBL
Match: A0A5A7T945 (DUF632 domain-containing protein/DUF630 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G00480 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 9.7e-22
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 0


Query: 35  SQEYKGEDESKLDKTKAAITRLQSLIIVTSQAVNTTSTAIVGLRNSDLIPQLVELCHG 93
           SQEYKGEDESKLDKTKAAITRLQSLIIVTSQAVNTTSTAIVGLRNSDLIPQLVELCHG
Sbjct: 496 SQEYKGEDESKLDKTKAAITRLQSLIIVTSQAVNTTSTAIVGLRNSDLIPQLVELCHG 553

[Close]

BLAST of IVF0012096.1 vs. ExPASy TrEMBL
Match: A0A5D3DM51 (Putative helicase CHR10 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002740 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 9.7e-22
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 0


Query: 35  SQEYKGEDESKLDKTKAAITRLQSLIIVTSQAVNTTSTAIVGLRNSDLIPQLVELCHG 93
           SQEYKGEDESKLDKTKAAITRLQSLIIVTSQAVNTTSTAIVGLRNSDLIPQLVELCHG
Sbjct: 494 SQEYKGEDESKLDKTKAAITRLQSLIIVTSQAVNTTSTAIVGLRNSDLIPQLVELCHG 551

[Close]

BLAST of IVF0012096.1 vs. ExPASy TrEMBL
Match: A0A1S3CBF7 (uncharacterized protein LOC103498813 OS=Cucumis melo OX=3656 GN=LOC103498813 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 9.7e-22
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 0


Query: 35  SQEYKGEDESKLDKTKAAITRLQSLIIVTSQAVNTTSTAIVGLRNSDLIPQLVELCHG 93
           SQEYKGEDESKLDKTKAAITRLQSLIIVTSQAVNTTSTAIVGLRNSDLIPQLVELCHG
Sbjct: 496 SQEYKGEDESKLDKTKAAITRLQSLIIVTSQAVNTTSTAIVGLRNSDLIPQLVELCHG 553

[Close]

BLAST of IVF0012096.1 vs. NCBI nr
Match: KAA0044264.1 (histone-lysine N-methyltransferase SETD2-like [Cucumis melo var. makuwa])

HSP 1 Score: 114 bits (286), Expect = 3.70e-30
Identity = 64/82 (78.05%), Postives = 66/82 (80.49%), Query Frame = 0


Query: 11  KAPMSLLFIHSKPPCILQASYPCLSQEYKGEDESKLDKTKAAITRLQSLIIVTSQAVNTT 70
           KA   +   H K   +LQ      SQEYKGEDESKLDKTKAAITRLQSLIIVTSQAVNTT
Sbjct: 39  KAREGVKIEHEKKLSLLQ------SQEYKGEDESKLDKTKAAITRLQSLIIVTSQAVNTT 98

Query: 71  STAIVGLRNSDLIPQLVELCHG 92
           STAIVGLRNSDLIPQLVELCHG
Sbjct: 99  STAIVGLRNSDLIPQLVELCHG 114

[Close]

BLAST of IVF0012096.1 vs. NCBI nr
Match: KAA0042925.1 (bZIP protein [Cucumis melo var. makuwa])

HSP 1 Score: 114 bits (286), Expect = 4.26e-30
Identity = 64/82 (78.05%), Postives = 66/82 (80.49%), Query Frame = 0


Query: 11  KAPMSLLFIHSKPPCILQASYPCLSQEYKGEDESKLDKTKAAITRLQSLIIVTSQAVNTT 70
           KA   +   H K   +LQ      SQEYKGEDESKLDKTKAAITRLQSLIIVTSQAVNTT
Sbjct: 39  KAREGVKIEHEKKLSLLQ------SQEYKGEDESKLDKTKAAITRLQSLIIVTSQAVNTT 98

Query: 71  STAIVGLRNSDLIPQLVELCHG 92
           STAIVGLRNSDLIPQLVELCHG
Sbjct: 99  STAIVGLRNSDLIPQLVELCHG 114

[Close]

BLAST of IVF0012096.1 vs. NCBI nr
Match: TYK05325.1 (bZIP protein [Cucumis melo var. makuwa])

HSP 1 Score: 112 bits (280), Expect = 3.45e-29
Identity = 63/82 (76.83%), Postives = 65/82 (79.27%), Query Frame = 0


Query: 11  KAPMSLLFIHSKPPCILQASYPCLSQEYKGEDESKLDKTKAAITRLQSLIIVTSQAVNTT 70
           KA   +   H K   +LQ      SQEYKGEDESKLDK KAAITRLQSLIIVTSQAVNTT
Sbjct: 39  KAREGVKIEHEKKLSLLQ------SQEYKGEDESKLDKMKAAITRLQSLIIVTSQAVNTT 98

Query: 71  STAIVGLRNSDLIPQLVELCHG 92
           STAIVGLRNSDLIPQLVELCHG
Sbjct: 99  STAIVGLRNSDLIPQLVELCHG 114

[Close]

BLAST of IVF0012096.1 vs. NCBI nr
Match: KAA0047058.1 (protein DETOXIFICATION 31-like [Cucumis melo var. makuwa])

HSP 1 Score: 113 bits (282), Expect = 3.57e-29
Identity = 63/87 (72.41%), Postives = 69/87 (79.31%), Query Frame = 0


Query: 6   TFYSSKAPMSLLFIHSKPPCILQASYPCLSQEYKGEDESKLDKTKAAITRLQSLIIVTSQ 65
           T ++ +A   +   H K   +LQ      SQEYKGE+ESKLDKTKAAITRLQSLIIVTSQ
Sbjct: 108 TNWNEEAREGVKIEHEKKLSLLQ------SQEYKGENESKLDKTKAAITRLQSLIIVTSQ 167

Query: 66  AVNTTSTAIVGLRNSDLIPQLVELCHG 92
           AVNTTSTAIVGLRNSDLIPQLVELCHG
Sbjct: 168 AVNTTSTAIVGLRNSDLIPQLVELCHG 188

[Close]

BLAST of IVF0012096.1 vs. NCBI nr
Match: XP_008459782.1 (PREDICTED: uncharacterized protein LOC103498813 [Cucumis melo])

HSP 1 Score: 113 bits (282), Expect = 1.10e-26
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 0


Query: 35  SQEYKGEDESKLDKTKAAITRLQSLIIVTSQAVNTTSTAIVGLRNSDLIPQLVELCHG 92
           SQEYKGEDESKLDKTKAAITRLQSLIIVTSQAVNTTSTAIVGLRNSDLIPQLVELCHG
Sbjct: 496 SQEYKGEDESKLDKTKAAITRLQSLIIVTSQAVNTTSTAIVGLRNSDLIPQLVELCHG 553

[Close]

BLAST of IVF0012096.1 vs. TAIR 10
Match: AT3G60320.1 (Protein of unknown function (DUF630 and DUF632) )

HSP 1 Score: 100.9 bits (250), Expect = 5.6e-22
Identity = 50/58 (86.21%), Postives = 56/58 (96.55%), Query Frame = 0


Query: 35  SQEYKGEDESKLDKTKAAITRLQSLIIVTSQAVNTTSTAIVGLRNSDLIPQLVELCHG 93
           SQEYKGEDE+KLDKTKA+ITRLQSLIIVTSQAV TTSTAI+ LR++DL+PQLVELCHG
Sbjct: 477 SQEYKGEDEAKLDKTKASITRLQSLIIVTSQAVTTTSTAIIRLRDTDLVPQLVELCHG 534

[Close]

BLAST of IVF0012096.1 vs. TAIR 10
Match: AT1G02110.1 (Protein of unknown function (DUF630 and DUF632) )

HSP 1 Score: 91.3 bits (225), Expect = 4.4e-19
Identity = 46/58 (79.31%), Postives = 53/58 (91.38%), Query Frame = 0


Query: 35  SQEYKGEDESKLDKTKAAITRLQSLIIVTSQAVNTTSTAIVGLRNSDLIPQLVELCHG 93
           SQEYKG DESKLDKTK +ITRLQSLIIV+S+AV TTS AI+ LR++DL+PQLVELCHG
Sbjct: 393 SQEYKGGDESKLDKTKTSITRLQSLIIVSSEAVLTTSNAILRLRDTDLVPQLVELCHG 450

[Close]

BLAST of IVF0012096.1 vs. TAIR 10
Match: AT4G30130.1 (Protein of unknown function (DUF630 and DUF632) )

HSP 1 Score: 46.6 bits (109), Expect = 1.3e-05
Identity = 24/58 (41.38%), Postives = 37/58 (63.79%), Query Frame = 0


Query: 35  SQEYKGEDESKLDKTKAAITRLQSLIIVTSQAVNTTSTAIVGLRNSDLIPQLVELCHG 93
           +Q+ KG D S +DKT+A I  L + I V+  ++ + S  I  LR+ +L+PQL+EL  G
Sbjct: 436 NQDVKGADSSAVDKTRATIRDLHTQIKVSIHSIESISERIETLRDQELLPQLLELVQG 493

[Close]

BLAST of IVF0012096.1 vs. TAIR 10
Match: AT2G19090.1 (Protein of unknown function (DUF630 and DUF632) )

HSP 1 Score: 45.1 bits (105), Expect = 3.6e-05
Identity = 23/58 (39.66%), Postives = 37/58 (63.79%), Query Frame = 0


Query: 35  SQEYKGEDESKLDKTKAAITRLQSLIIVTSQAVNTTSTAIVGLRNSDLIPQLVELCHG 93
           +Q+ KG+D   +DKT+A I  L + I V+  ++ + S  I  LR+ +L+PQL+EL  G
Sbjct: 517 NQDVKGDDPLAVDKTRATIRDLDTQIKVSIHSIESISKRIETLRDQELLPQLLELVEG 574

[Close]

BLAST of IVF0012096.1 vs. TAIR 10
Match: AT3G51290.1 (Protein of unknown function (DUF630) ;Protein of unknown function (DUF632) )

HSP 1 Score: 44.7 bits (104), Expect = 4.8e-05
Identity = 23/56 (41.07%), Postives = 35/56 (62.50%), Query Frame = 0


Query: 37  EYKGEDESKLDKTKAAITRLQSLIIVTSQAVNTTSTAIVGLRNSDLIPQLVELCHG 93
           E K  +  K +K K  + +L+S + V+SQA+ + S  I+ LR ++L PQLVEL  G
Sbjct: 328 EMKRAEYVKTEKAKKDVEKLESQLSVSSQAIQSASNEIIKLRETELYPQLVELVKG 383

The following BLAST results are available for this feature:

BLAST of IVF0012096.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93YU8	7.9e-21	86.21	Nitrate regulatory gene2 protein OS=Arabidopsis thaliana OX=3702 GN=NRG2 PE=1 SV...	[more]
Q9AQW1	4.2e-14	57.50	Protein ROLLING AND ERECT LEAF 2 OS=Oryza sativa subsp. japonica OX=39947 GN=REL...	[more]
A0A178VBJ0	6.7e-04	41.07	Protein ALTERED PHOSPHATE STARVATION RESPONSE 1 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of IVF0012096.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TND8	5.7e-22	78.05	BZIP protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G004480 P...	[more]
A0A5A7TM53	5.7e-22	78.05	Histone-lysine N-methyltransferase SETD2-like OS=Cucumis melo var. makuwa OX=119...	[more]
A0A5A7T945	9.7e-22	100.00	DUF632 domain-containing protein/DUF630 domain-containing protein OS=Cucumis mel...	[more]
A0A5D3DM51	9.7e-22	100.00	Putative helicase CHR10 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3CBF7	9.7e-22	100.00	uncharacterized protein LOC103498813 OS=Cucumis melo OX=3656 GN=LOC103498813 PE=...	[more]

BLAST of IVF0012096.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0044264.1	3.70e-30	78.05	histone-lysine N-methyltransferase SETD2-like [Cucumis melo var. makuwa]	[more]
KAA0042925.1	4.26e-30	78.05	bZIP protein [Cucumis melo var. makuwa]	[more]
TYK05325.1	3.45e-29	76.83	bZIP protein [Cucumis melo var. makuwa]	[more]
KAA0047058.1	3.57e-29	72.41	protein DETOXIFICATION 31-like [Cucumis melo var. makuwa]	[more]
XP_008459782.1	1.10e-26	100.00	PREDICTED: uncharacterized protein LOC103498813 [Cucumis melo]	[more]

BLAST of IVF0012096.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G60320.1	5.6e-22	86.21	Protein of unknown function (DUF630 and DUF632)	[more]
AT1G02110.1	4.4e-19	79.31	Protein of unknown function (DUF630 and DUF632)	[more]
AT4G30130.1	1.3e-05	41.38	Protein of unknown function (DUF630 and DUF632)	[more]
AT2G19090.1	3.6e-05	39.66	Protein of unknown function (DUF630 and DUF632)	[more]
AT3G51290.1	4.8e-05	41.07	Protein of unknown function (DUF630) ;Protein of unknown function (DUF632)	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006867	Domain of unknown function DUF632	PFAM	PF04782	DUF632	coord: 35..92 e-value: 5.6E-16 score: 58.7
None	No IPR available	PANTHER	PTHR21450:SF9	BZIP DOMAIN CLASS TRANSCRIPTION FACTOR (DUF630 AND DUF632)-RELATED	coord: 35..92
None	No IPR available	PANTHER	PTHR21450	UNCHARACTERIZED	coord: 35..92

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
IVF0012096	IVF0012096	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0012096.1-exon	IVF0012096.1-exon-chr05:9536703..9536879	exon
IVF0012096.1-exon	IVF0012096.1-exon-chr05:9537015..9537116	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0012096.1-cds	IVF0012096.1-cds-chr05:9536703..9536879	CDS
IVF0012096.1-cds	IVF0012096.1-cds-chr05:9537015..9537116	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
IVF0012096.1	IVF0012096.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032259	methylation
biological_process	GO:0055085	transmembrane transport
biological_process	GO:0042908	xenobiotic transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0015297	antiporter activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0042910	xenobiotic transmembrane transporter activity