IVF0005443.1 (mRNA) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCTCCAAATCTCTCGCGCACAGCTTTCGTAATTTCTCAACTGTCCCTTCCTTTTGCATCGCTTCAACAATTTTCCGGACGACGTATACAACGATCTCTACATTTCGCCCAACAGTACACCGCTCGATATCGGTTGCCTCTCGTCCTGTATCGGTCACCCCCGGCAGTTTCACTTGGGACGACGTTGTCCATGTTTCTTCACCAGAAAGCTTTCAGGATGATCCTGCGGATTTGACGGGCTATTTCGAGAAGGTCAAGCTCTGCAATCGCGGATCAGTAGGTCTCTTTCTCCTTTTCTTTTCTTGTTTCGCTGTACAAACGAAAGATGTAAAGGCATTCCTTTCGGTACCAATTGTATACATTAGTTGGTTTTATATTTTTTAGATTCAGTGCAGGAAAAGCTATAGACTGATGCAATGTTGTCCCATGTCTGTCTGGAATGGACTAAAATTTTCTTACAGGATACGCAATCTGAATTTTTTCCGTTTGTCATCGATGGCCAAATTGTAGGCTACGTGCACCACGGGTGAGGCTTCTGTATCTTTATGGATGACCTTTGTTGGCTATGTTTGGTCGAAGCCACTTATTTACACTCCTTTTGTCAAAATTAGCTCGTGTGCGGTTGCTATATACAATGGATGGGTTTAATTGGTTTGTTTTAATGAGCTTTATGCAGTTTCGCTAAACACCTGCAGCAGTATCCGAATGTGTTTACCTTCTCTCAAGACGATTCTGTTAAATTTGGGGCTTACTTAACCTTGCATGAATCCTTGAAGACACCCGAAGATAGGACGCGTGCAGTTGGAGATGTAGTTAAATGCTTGGGTGAAGAAGTCATTCCGGGCACACGGAATGAGGTACTGGTTTATGATTCCAATTTAAAGCGATTATTACTTTACTTATCAATACCTGTTTGCAACTGTTTCACTGAAGGAGAAAATAAAAGGAAAGAATTTCCTTCTTCTGTTTAATACTGGAAATAAACTGTTTCTTTTTAGAAGGGTAATTTTAGAAGAAAACAATACTTCATGTGGCTAACTATGGATAACTGTAAACTATGTCAGCTTTTCCCTGTTACTTCGTCATTTGGTGCGCCGAACTTTTTTTCACTCGAACGTGCTGCAGCCCCTTATTTTGGAATAAAGGTGCAAAACGAATGTTCCCCTTTTACTGCTTTGTGGAGACTTTCAAAATTTTGTTCAATTTTTGTGAAATGCACTTCGGAAACTATATTTTGGTCCTTTTTGTTAGGCCCTTGAGCATAGTGGGCCATTTGATTTGTTGAATCTGTTCACACAAGTGTAGTTGTTAGGTCCAAATATAAGTGGAACTTGTTATATTTATGGTGACCACCTACTTAGTAGTTAGTTTTCTACAAGTTTCCTTGATACCCAAATGTTGTAGGGTCAGACACTTAAGTTGGCTTGGACATTCAAAGATATATAGAAAGAAATAAAAAATCTGAATATAAAGATTTGAAATAACAGATGATTTTGCAAACTTTCTGGTGCTAAAAATTCTACTTGGCAACTGCATTTCTTTTACATGTGCCAATCTCCTGCCTTGTTTAGAGGTTTAATCGTGGAATATGAGACGCACACAAAAAAACCGGTATTTTGTCCTCTTTTCTGCTTCTTCTGCAATCATTTTGACCACCTATATAACAAGACTAAAATCATTTTCATTGCTCTTCTTCCCTCCATTGATATTGGATTAAATTCAATCTTCCCTTGATTGAAACTCTGAAGTTTAAACTACACTAAATTCATGTTGGGAATAAATTTTGGTCATGGAAATAACCCTCACAGCAGTCCTATTAGTATTAGCTCTTGGTAAACACATTGCAAGATATCCTCCCTACATCCTCCAGGCTGTTGATCCTGGTGAGGCTAATCTTTTGGAGGCTTCTAGAGAAAACTGCAGGGCTCTGTGGTTACTTTCAAAGATTGTACAGCTTAGCCAACAGAAATATATAAAAGATGTATGGGGAAGTGGTATAAGAGGAAATTTTAATGCTGGTAGTATTTGAGAAGAGATTTCTTTACTTAAATCGATGACTTAATGACTTCTTGCATGATGAGAGTATTTAGGGCTTGACATTGACAACTAGATAAACCTAGAACCTTTCTTGAGATTTTATGATGTGCCACCTTACCATCGTGGTTGATACCTGTCTTGCAGTGTTTGCCAACAATAAACTACAATGGAAATTTAAGCTCCCAAAAGGATCAGATTTTTCTTATGCTCCCTAGCCCATGCCAAAGTTCATTCTACTAACAGTACCTAAAAGAAAAATATCTGTTTAGCCTTTTATTCCTCAGTGCTATGGTTCACTAGAAAATGATTGGTCATTCCTCAAAGTAGCTCAAGAGGGCAATATTAATTTTGCAGGTTAAGTGAAACTCTTTGAAGGGTTAAATATAGAGAATATCTCTCATGGTGTAAATGGAAAATTCATTTTGCATAGGGTAAAGCATACATCACTATAGCTGATATCTGAAGTTATTCACACACTTTGATCTACTTACAAAAGAAGTGGCTAGACATTGAAGGGAAATATATTGTTGAATGAGCATGTTTATTCTTCTTTTTGTCTTTCTTATAATCGTGAGTGTTTGGGCTAGCTTACGTGCACCTTGACTAATCTCACGAGACAACCTGTCTGAACCTACAATATTTAGGTATCAAGGAAACTCGTAGGAAACTAATTCCTAGGTAAGAGACCACTATGGATTGAACTCATGACATCTTAGTTAGTTATTGAGACTATGTCTCCTTTTTTATCATTTGGCTAACCCATGATGATTGTTGAATGTACATGTTGGAGACGGAAATTGGCGGCTTGGTTGTAGATTACTGAAAGTTAGTTTACTTTACTACTTGGTTTCTCTAACTTTTACCTGCCTTCTCTTGGTGCTTTTCTTAGCACAGGTTTATGGTGTTCATATGAATGGTTATGTTGAGAAGGAGGGAAAGAAGTTTTTGTGGGTTGCTAAAAGAAGCCAAACAAAGCCAACTTTTCCTGGAATGTTGGATCATTTAGTAGCTGGAGGGCTGGTATGGAATAAGTGATAGCTAACTGTTGCAAGTTTCCATACATGTGCTTCTGTCCCGTTAAAATATGAAAAATAAAGACTTTTCTGCTTTTTAAGATTGGATGTTATGGTGTGTTAGTTCCCTTAACCTTTTTCTTTTCTTCTGCTGGGTATTTGTAGTTATATAAATACTTTCCAGTGAGTTAATATATCATTTAGCCTTCAAACTCTTTTTCAGTTTTGGTTCATAATATTTTCCAAGTTGTAAGGGTTAATTGTACCCTTAAGATATCAAAATATTTTGAAGTACATGTTATTTGTCGATATTGATAAAGAATGGTGACATGGAATTATTTTTTTTTTATTTGTGCAAAAGTTTTTTGAATATTATCCTATTTAGCTAAAAAATCCAACCTCCTTATTTACTATTTTATAAGATAAGAATAGATAATATATTTTTACCCTGTTTTATATAGTTTCATTGATTGACTAAGGGCTTGATTGAACATTTTGATACCTATATAGATGTAAGCTTTAGAGGCTGAATTATATATTTGAACCTTTCTCGTTAGTAATATTACATCCTGCTCCTGCTATAAAAGAATCTGTTTGTATTTCAGTTTGCATCTCTAGTTTGATAAAGTTAGTATATACATACAGCAATTATTGAGTTTACTTTGTTTGACTGTCCATTTGGATAATAAAGATTAAACGTTATAAAAAATTAGACAAAGTTTTGATACTGCAGTTTTTTTTTTCTCGTTTGATGATTTACAACTCATCAATAAATTAATTGGTTAAAAAGCAATGTGTTATATGGAGGGGTGTGAAATATGATGATGTTCATAGGAGCAGTTTGAAAGTCTGCCTATGAATTTTAAAACGTAGTTATATATGCAAACCTTGATACTAATCAGAGGAAAAAGAGACAAATGTAAAGTTCGAAATGTGATCTTGACTGCTCAGTAGTGTACTTATCGTGCCTCCGTAGCTATTCCCTGACATCTTGATTTTGACAGCCTCAGGGCATCTCTTGTGGGGAGAATCTGATGAAAGAATGCAAGGAGGAAGCAGGCATACCGAGATCAATATCAAAAGAGTAATTTCCTATAAAGAATTTGACAATGGACACGAATGTAACCTCCATGTATTTCACAGTTTTGGTGGATCTCGTGGCTTCTTATGATGCTTTTGATTTAGGGCCATACCAGTTGGTGCCATTTCATACACAGACATCAAAGGTTATGGTTACAAGAGAGATGTTCAATTCTGTTACGATTTAAAGCTTCCTGAAAGCTTTGTACCGGAGAATCAAGGTTAGCTAGGCTGATAACTTTTCTTTACATCGCAATTCAATATTTAGCTTACAAAGTGTGGTACATTGCATTTGACTGGCTCCTAACTACTCTCTTATGCATGCAATTTGTTTTTTTTTTTTCATTACAAATTTTTGTAGTTTGAAATCTCTTGTCACTAACTCGCTGACTGTACTTTTGTTAGATGGAGAGGTTGAAGGATTCATGTTGTTGCCTGTGACAAATGTTGCAAATGTGATCCGGAGGACACAGTTCTTCAAGCCTAATTGTTCTCTTGTTATTATCAATTTCCTGTTTCGACATGGGTACGAAATATTATCTTCTTTGAATATACCTTTGTTCCTCAACCATTATTTTATTTAGTTACAACTCTATTTTAGGTTTTGGTTGTAAATATTGGTGGGTTCAACCAAATTTTCAGAAATAGTTATATTCCATGTTTTCATAATTTTTTAATACGTGGTTGTTTACTTTGGTTTAGATGAGCAGATTTTTATTCTGAAAACAATGAAAATGCATAAATGTTTTGAAAACATTCACTTCCTATGCCACAGAATTTAAACACATTCTGATACTTTCATAAATAAGTCCATAAAATACAATTAATTAATGAATTCATTTGATTCAGTAAATTTGAAGAAAAGAAATTAAACTTGCATTAGATACCAAACTAACTTTTATAAATCCGTTCTTTCCTCCATGTTTTGAATCTTTCTACACGTGTGTGTGTAAGCAACCCAGTATATGCTAATTACCACTCCTCAGGCTATCCTTATATAGTCCACAGTATTTTGTATTAATGCATTTAAAAACTTGCAGATACATTAAACCCGAAAGTTCGGGATACTTGGAGCTACTGCAGGGTTTGAGAAGTGGGACATGCTTCTGA ATGGCCTCCAAATCTCTCGCGCACAGCTTTCGTAATTTCTCAACTGTCCCTTCCTTTTGCATCGCTTCAACAATTTTCCGGACGACGTATACAACGATCTCTACATTTCGCCCAACAGTACACCGCTCGATATCGGTTGCCTCTCGTCCTGTATCGGTCACCCCCGGCAGTTTCACTTGGGACGACGTTGTCCATGTTTCTTCACCAGAAAGCTTTCAGGATGATCCTGCGGATTTGACGGGCTATTTCGAGAAGGTCAAGCTCTGCAATCGCGGATCAGATACGCAATCTGAATTTTTTCCGTTTGTCATCGATGGCCAAATTGTAGGCTACGTGCACCACGGTTTCGCTAAACACCTGCAGCAGTATCCGAATGTGTTTACCTTCTCTCAAGACGATTCTGTTAAATTTGGGGCTTACTTAACCTTGCATGAATCCTTGAAGACACCCGAAGATAGGACGCGTGCAGTTGGAGATGTAGTTAAATGCTTGGGTGAAGAAGTCATTCCGGGCACACGGAATGAGCTTTTCCCTGTTACTTCGTCATTTGGTGCGCCGAACTTTTTTTCACTCGAACGTGCTGCAGCCCCTTATTTTGGAATAAAGGTTTATGGTGTTCATATGAATGGTTATGTTGAGAAGGAGGGAAAGAAGTTTTTGTGGGTTGCTAAAAGAAGCCAAACAAAGCCAACTTTTCCTGGAATGTTGGATCATTTAGTAGCTGGAGGGCTGCCTCAGGGCATCTCTTGTGGGGAGAATCTGATGAAAGAATGCAAGGAGGAAGCAGGCATACCGAGATCAATATCAAAAGAGGCCATACCAGTTGGTGCCATTTCATACACAGACATCAAAGGTTATGGTTACAAGAGAGATGTTCAATTCTGTTACGATTTAAAGCTTCCTGAAAGCTTTGTACCGGAGAATCAAGATGGAGAGGTTGAAGGATTCATGTTGTTGCCTGTGACAAATGTTGCAAATGTGATCCGGAGGACACAGTTCTTCAAGCCTAATTGTTCTCTTGTTATTATCAATTTCCTGTTTCGACATGGATACATTAAACCCGAAAGTTCGGGATACTTGGAGCTACTGCAGGGTTTGAGAAGTGGGACATGCTTCTGA ATGGCCTCCAAATCTCTCGCGCACAGCTTTCGTAATTTCTCAACTGTCCCTTCCTTTTGCATCGCTTCAACAATTTTCCGGACGACGTATACAACGATCTCTACATTTCGCCCAACAGTACACCGCTCGATATCGGTTGCCTCTCGTCCTGTATCGGTCACCCCCGGCAGTTTCACTTGGGACGACGTTGTCCATGTTTCTTCACCAGAAAGCTTTCAGGATGATCCTGCGGATTTGACGGGCTATTTCGAGAAGGTCAAGCTCTGCAATCGCGGATCAGATACGCAATCTGAATTTTTTCCGTTTGTCATCGATGGCCAAATTGTAGGCTACGTGCACCACGGTTTCGCTAAACACCTGCAGCAGTATCCGAATGTGTTTACCTTCTCTCAAGACGATTCTGTTAAATTTGGGGCTTACTTAACCTTGCATGAATCCTTGAAGACACCCGAAGATAGGACGCGTGCAGTTGGAGATGTAGTTAAATGCTTGGGTGAAGAAGTCATTCCGGGCACACGGAATGAGCTTTTCCCTGTTACTTCGTCATTTGGTGCGCCGAACTTTTTTTCACTCGAACGTGCTGCAGCCCCTTATTTTGGAATAAAGGTTTATGGTGTTCATATGAATGGTTATGTTGAGAAGGAGGGAAAGAAGTTTTTGTGGGTTGCTAAAAGAAGCCAAACAAAGCCAACTTTTCCTGGAATGTTGGATCATTTAGTAGCTGGAGGGCTGCCTCAGGGCATCTCTTGTGGGGAGAATCTGATGAAAGAATGCAAGGAGGAAGCAGGCATACCGAGATCAATATCAAAAGAGGCCATACCAGTTGGTGCCATTTCATACACAGACATCAAAGGTTATGGTTACAAGAGAGATGTTCAATTCTGTTACGATTTAAAGCTTCCTGAAAGCTTTGTACCGGAGAATCAAGATGGAGAGGTTGAAGGATTCATGTTGTTGCCTGTGACAAATGTTGCAAATGTGATCCGGAGGACACAGTTCTTCAAGCCTAATTGTTCTCTTGTTATTATCAATTTCCTGTTTCGACATGGATACATTAAACCCGAAAGTTCGGGATACTTGGAGCTACTGCAGGGTTTGAGAAGTGGGACATGCTTCTGA MASKSLAHSFRNFSTVPSFCIASTIFRTTYTTISTFRPTVHRSISVASRPVSVTPGSFTWDDVVHVSSPESFQDDPADLTGYFEKVKLCNRGSDTQSEFFPFVIDGQIVGYVHHGFAKHLQQYPNVFTFSQDDSVKFGAYLTLHESLKTPEDRTRAVGDVVKCLGEEVIPGTRNELFPVTSSFGAPNFFSLERAAAPYFGIKVYGVHMNGYVEKEGKKFLWVAKRSQTKPTFPGMLDHLVAGGLPQGISCGENLMKECKEEAGIPRSISKEAIPVGAISYTDIKGYGYKRDVQFCYDLKLPESFVPENQDGEVEGFMLLPVTNVANVIRRTQFFKPNCSLVIINFLFRHGYIKPESSGYLELLQGLRSGTCF Homology
BLAST of IVF0005443.1 vs. ExPASy Swiss-Prot
Match: Q8VXZ0 (Nudix hydrolase 20, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NUDT20 PE=2 SV=1) HSP 1 Score: 429.5 bits (1103), Expect = 3.9e-119 Identity = 212/350 (60.57%), Postives = 270/350 (77.14%), Query Frame = 0
BLAST of IVF0005443.1 vs. ExPASy Swiss-Prot
Match: P0C026 (Nudix hydrolase 24, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NUDT24 PE=2 SV=1) HSP 1 Score: 402.1 bits (1032), Expect = 6.7e-111 Identity = 200/370 (54.05%), Postives = 262/370 (70.81%), Query Frame = 0
BLAST of IVF0005443.1 vs. ExPASy Swiss-Prot
Match: P47173 (Uncharacterized protein YJR142W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=YJR142W PE=1 SV=1) HSP 1 Score: 150.2 bits (378), Expect = 4.6e-35 Identity = 86/210 (40.95%), Postives = 123/210 (58.57%), Query Frame = 0
BLAST of IVF0005443.1 vs. ExPASy Swiss-Prot
Match: P41888 (Thiamine pyrophosphokinase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=tnr3 PE=4 SV=1) HSP 1 Score: 134.4 bits (337), Expect = 2.6e-30 Identity = 93/271 (34.32%), Postives = 139/271 (51.29%), Query Frame = 0
BLAST of IVF0005443.1 vs. ExPASy TrEMBL
Match: A0A1S3CJ09 (nudix hydrolase 20, chloroplastic-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501537 PE=4 SV=1) HSP 1 Score: 755.7 bits (1950), Expect = 8.8e-215 Identity = 367/372 (98.66%), Postives = 368/372 (98.92%), Query Frame = 0
BLAST of IVF0005443.1 vs. ExPASy TrEMBL
Match: A0A5A7TT66 (Nudix hydrolase 20 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold114G001740 PE=4 SV=1) HSP 1 Score: 742.7 bits (1916), Expect = 7.7e-211 Identity = 367/395 (92.91%), Postives = 368/395 (93.16%), Query Frame = 0
BLAST of IVF0005443.1 vs. ExPASy TrEMBL
Match: A0A0A0LWL2 (Nudix hydrolase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G386580 PE=4 SV=1) HSP 1 Score: 714.1 bits (1842), Expect = 2.9e-202 Identity = 350/372 (94.09%), Postives = 356/372 (95.70%), Query Frame = 0
BLAST of IVF0005443.1 vs. ExPASy TrEMBL
Match: A0A1S3CJI7 (nudix hydrolase 20, chloroplastic-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501537 PE=4 SV=1) HSP 1 Score: 686.8 bits (1771), Expect = 5.0e-194 Identity = 340/372 (91.40%), Postives = 341/372 (91.67%), Query Frame = 0
BLAST of IVF0005443.1 vs. ExPASy TrEMBL
Match: A0A5D3BJT0 (Nudix hydrolase 20 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold596G00320 PE=4 SV=1) HSP 1 Score: 681.8 bits (1758), Expect = 1.6e-192 Identity = 344/398 (86.43%), Postives = 344/398 (86.43%), Query Frame = 0
BLAST of IVF0005443.1 vs. NCBI nr
Match: XP_008463362.1 (PREDICTED: nudix hydrolase 20, chloroplastic-like isoform X1 [Cucumis melo]) HSP 1 Score: 748 bits (1930), Expect = 2.44e-272 Identity = 367/372 (98.66%), Postives = 368/372 (98.92%), Query Frame = 0
BLAST of IVF0005443.1 vs. NCBI nr
Match: KAA0046622.1 (nudix hydrolase 20 [Cucumis melo var. makuwa]) HSP 1 Score: 734 bits (1896), Expect = 8.86e-267 Identity = 367/395 (92.91%), Postives = 368/395 (93.16%), Query Frame = 0
BLAST of IVF0005443.1 vs. NCBI nr
Match: XP_004148712.1 (nudix hydrolase 20, chloroplastic isoform X3 [Cucumis sativus] >KGN65374.1 hypothetical protein Csa_020063 [Cucumis sativus]) HSP 1 Score: 706 bits (1823), Expect = 4.63e-256 Identity = 350/372 (94.09%), Postives = 356/372 (95.70%), Query Frame = 0
BLAST of IVF0005443.1 vs. NCBI nr
Match: XP_038879265.1 (nudix hydrolase 20, chloroplastic-like isoform X3 [Benincasa hispida]) HSP 1 Score: 683 bits (1762), Expect = 1.02e-246 Identity = 337/373 (90.35%), Postives = 349/373 (93.57%), Query Frame = 0
BLAST of IVF0005443.1 vs. NCBI nr
Match: XP_008463363.1 (PREDICTED: nudix hydrolase 20, chloroplastic-like isoform X2 [Cucumis melo]) HSP 1 Score: 679 bits (1752), Expect = 1.20e-245 Identity = 340/372 (91.40%), Postives = 341/372 (91.67%), Query Frame = 0
BLAST of IVF0005443.1 vs. TAIR 10
Match: AT5G19460.1 (nudix hydrolase homolog 20 ) HSP 1 Score: 429.5 bits (1103), Expect = 2.8e-120 Identity = 212/350 (60.57%), Postives = 270/350 (77.14%), Query Frame = 0
BLAST of IVF0005443.1 vs. TAIR 10
Match: AT5G19470.1 (nudix hydrolase homolog 24 ) HSP 1 Score: 402.1 bits (1032), Expect = 4.8e-112 Identity = 200/370 (54.05%), Postives = 262/370 (70.81%), Query Frame = 0
BLAST of IVF0005443.1 vs. TAIR 10
Match: AT5G19470.2 (nudix hydrolase homolog 24 ) HSP 1 Score: 386.3 bits (991), Expect = 2.7e-107 Identity = 195/370 (52.70%), Postives = 257/370 (69.46%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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