IVF0001648.1 (mRNA) Melon (IVF77) v1

Overview


Name	IVF0001648.1
Type	mRNA
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	S-protein homolog
Location	chr01: 7639858 .. 7640280 (+)
Sequence length	423
RNA-Seq Expression	IVF0001648.1
Synteny	IVF0001648.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTCCTTTTCAACATTTGCACTATGTCTTTTGATATCTATCTTTTTTTCTAGCCTATTCACTATCGAAGGAAAACCGTTCCAAAATCCACTCGTTACAGTCAACATAACAAATGCTCTAACACATAAGGATCAACTCACCGTTCATTGCAAATCTGGCGATGACGACTTGGGAGTCCACCAGCTGCAGCCTTTGGGTGGCTACGCCTTCACTTTTCGACCAAACTTCATTGGTACAACATTGTTTTACTGTACCTTCCAGTGGCCCGGTTGGTCACACAGCTTCGATATTTACAAGGATTCAAGAGATAGAGATCGTTGCAACGGTCTTTGTTTATGGATTGTGGGTGAACAAGGTGTCTGTATGTTCCACTATGTTACCAAAAAATATGATTTTTGCTATACATGGGTGGATAAATGA

mRNA sequence

ATGGGTTCCTTTTCAACATTTGCACTATGTCTTTTGATATCTATCTTTTTTTCTAGCCTATTCACTATCGAAGGAAAACCGTTCCAAAATCCACTCGTTACAGTCAACATAACAAATGCTCTAACACATAAGGATCAACTCACCGTTCATTGCAAATCTGGCGATGACGACTTGGGAGTCCACCAGCTGCAGCCTTTGGGTGGCTACGCCTTCACTTTTCGACCAAACTTCATTGGTACAACATTGTTTTACTGTACCTTCCAGTGGCCCGGTTGGTCACACAGCTTCGATATTTACAAGGATTCAAGAGATAGAGATCGTTGCAACGGTCTTTGTTTATGGATTGTGGGTGAACAAGGTGTCTGTATGTTCCACTATGTTACCAAAAAATATGATTTTTGCTATACATGGGTGGATAAATGA

Coding sequence (CDS)

ATGGGTTCCTTTTCAACATTTGCACTATGTCTTTTGATATCTATCTTTTTTTCTAGCCTATTCACTATCGAAGGAAAACCGTTCCAAAATCCACTCGTTACAGTCAACATAACAAATGCTCTAACACATAAGGATCAACTCACCGTTCATTGCAAATCTGGCGATGACGACTTGGGAGTCCACCAGCTGCAGCCTTTGGGTGGCTACGCCTTCACTTTTCGACCAAACTTCATTGGTACAACATTGTTTTACTGTACCTTCCAGTGGCCCGGTTGGTCACACAGCTTCGATATTTACAAGGATTCAAGAGATAGAGATCGTTGCAACGGTCTTTGTTTATGGATTGTGGGTGAACAAGGTGTCTGTATGTTCCACTATGTTACCAAAAAATATGATTTTTGCTATACATGGGTGGATAAATGA

Protein sequence

MGSFSTFALCLLISIFFSSLFTIEGKPFQNPLVTVNITNALTHKDQLTVHCKSGDDDLGVHQLQPLGGYAFTFRPNFIGTTLFYCTFQWPGWSHSFDIYKDSRDRDRCNGLCLWIVGEQGVCMFHYVTKKYDFCYTWVDK

Homology

[Close]

BLAST of IVF0001648.1 vs. ExPASy Swiss-Prot
Match: F4JLQ5 (S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.2e-23
Identity = 51/108 (47.22%), Postives = 67/108 (62.04%), Query Frame = 0


Query: 34  TVNITNALTHKDQLTVHCKSGDDDLGVHQLQPLGGYAFTFRPNFIGTTLFYCTFQWPGWS 93
           TV I N L ++  L  HCKS DDDLG   LQP   ++F+F   F G TL++C+F WP  S
Sbjct: 49  TVEINNDLGNQLTLLYHCKSKDDDLGNRTLQPGESWSFSFGRQFFGRTLYFCSFSWPNES 108

Query: 94  HSFDIYKDSRDR---DRC-NGLCLWIVGEQGVCMFHYVTKKYDFCYTW 138
           HSFDIYKD RD    ++C +  C+W +   G C F+  TK++D CY W
Sbjct: 109 HSFDIYKDHRDSGGDNKCESDRCVWKIRRNGPCRFNDETKQFDLCYPW 156

[Close]

BLAST of IVF0001648.1 vs. ExPASy Swiss-Prot
Match: Q9FMQ4 (S-protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=SPH3 PE=2 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 5.8e-23
Identity = 58/130 (44.62%), Postives = 72/130 (55.38%), Query Frame = 0


Query: 11  LLISIFFSSLFTIEGKPFQNPLVTVNITNALTHKDQLTVHCKSGDDDLGVHQLQPLGGYA 70
           LLI I FS + T     +    + V ITN L     L +HCKS DDDLG+  L P G ++
Sbjct: 16  LLIKIAFSQVKTDFDVNWSTSKM-VRITNRLGDGLTLNLHCKSADDDLGLKILAPNGSWS 75

Query: 71  FTFRPNFIGTTLFYCTFQWPGWSHSFDIYKDSRDRDRCNGL---CLWIVGEQGVCMFHYV 130
           F FR + +GTTLFYC F WPG S  FDIY D RD  R +     C+W +  QG CMF   
Sbjct: 76  FKFRTSIVGTTLFYCHFTWPGQSKRFDIYDDDRDGVRSHISCINCIWDISIQGPCMFSES 135

Query: 131 TKKYDFCYTW 138
              ++ CY W
Sbjct: 136 DHAFNICYDW 144

[Close]

BLAST of IVF0001648.1 vs. ExPASy Swiss-Prot
Match: F4JZG1 (S-protein homolog 4 OS=Arabidopsis thaliana OX=3702 GN=SPH4 PE=3 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.1e-21
Identity = 54/131 (41.22%), Postives = 70/131 (53.44%), Query Frame = 0


Query: 11  LLISIFFSSLFTIEGKPFQNPLVTVNITNALTHKDQLTVHCKSGDDDLGVHQLQPLGGYA 70
           LLI I FS +       +      V ITN L     L +HCKS DDDLG+  L P G ++
Sbjct: 16  LLIQIAFSQVKPGSDLKWSTLKSVVTITNRLGDGSTLKLHCKSADDDLGLKILAPNGSWS 75

Query: 71  FTFRPNFI-GTTLFYCTFQWPGWSHSFDIYKDSRDRDRCN---GLCLWIVGEQGVCMFHY 130
           F FRP+ + G TLF+C F WPG S  F+IY D RD  R       C+W +G+ G C F  
Sbjct: 76  FKFRPSIVPGVTLFFCHFTWPGQSKWFNIYDDDRDGVRMGIPCIYCIWDIGKYGPCRFSE 135

Query: 131 VTKKYDFCYTW 138
           +   ++ CY W
Sbjct: 136 IDDAFNICYDW 146

[Close]

BLAST of IVF0001648.1 vs. ExPASy Swiss-Prot
Match: P0DN93 (S-protein homolog 29 OS=Arabidopsis thaliana OX=3702 GN=SPH29 PE=3 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 4.0e-16
Identity = 48/137 (35.04%), Postives = 67/137 (48.91%), Query Frame = 0


Query: 1   MGSFSTFALCLLISIFFSSLFTIEGKPFQNPLVTVNITNALTHKDQLTVHCKSGDDDLGV 60
           M + S   + L I +F+         PF   +VTV  TN ++ +  LT+ C+S DDDLG 
Sbjct: 1   MKNSSKIFVVLSIILFYVISSCHGYNPFAKTVVTV--TNNISPQTTLTISCRSKDDDLGE 60

Query: 61  HQLQPLGGYAFTFRPNFIGTTLFYCTFQWPGWSHSFDIYKDSRDRDRCNGLCLWIVGEQG 120
           H L     + + FRP++  TTLF C F W      FD Y+  RD+  C   C W +    
Sbjct: 61  HLLLHGQAFLWKFRPSWFRTTLFTCKFLWNNNVKWFDTYRSDRDQGHCYS-CNWSINADS 120

Query: 121 VCMFHYVTKKYDFCYTW 138
            C+     KK+D CY W
Sbjct: 121 ACISGNFNKKFDRCYPW 134

[Close]

BLAST of IVF0001648.1 vs. ExPASy Swiss-Prot
Match: O23020 (S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 2.2e-14
Identity = 48/128 (37.50%), Postives = 62/128 (48.44%), Query Frame = 0


Query: 12  LISIFFSSLF--TIEGKPFQNPLVTVNITNALTHKDQLTVHCKSGDDDLGVHQLQPLGGY 71
           ++  FF  LF     G P       V +TN L     LT+HCKS  DDLG+H +     Y
Sbjct: 6   IVCFFFFLLFGSGYGGLPPFWRATVVTMTN-LIGGPPLTIHCKSKQDDLGIHVVPFKQEY 65

Query: 72  AFTFRPNFIGTTLFYCTFQWPGWSHSFDIYKDSRDRDRCNGLCLWIVGEQGVCMFHYVTK 131
            F F+PN   +TLF+C+FQW     SFDIY   RD+  C+  C W +   G C      K
Sbjct: 66  HFKFQPNLWKSTLFFCSFQWDSQFKSFDIYDAQRDQGICDD-CQWEIKPDGPCRLGKKAK 125

Query: 132 KYDFCYTW 138
               C+ W
Sbjct: 126 ----CFPW 127

[Close]

BLAST of IVF0001648.1 vs. ExPASy TrEMBL
Match: A0A1S3CP53 (S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103503190 PE=3 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 5.9e-71
Identity = 120/121 (99.17%), Postives = 121/121 (100.00%), Query Frame = 0


Query: 20  LFTIEGKPFQNPLVTVNITNALTHKDQLTVHCKSGDDDLGVHQLQPLGGYAFTFRPNFIG 79
           LFTIEGKPFQNPLVTVNITNALTHKDQLTVHCKSGDDDLG+HQLQPLGGYAFTFRPNFIG
Sbjct: 1   LFTIEGKPFQNPLVTVNITNALTHKDQLTVHCKSGDDDLGIHQLQPLGGYAFTFRPNFIG 60

Query: 80  TTLFYCTFQWPGWSHSFDIYKDSRDRDRCNGLCLWIVGEQGVCMFHYVTKKYDFCYTWVD 139
           TTLFYCTFQWPGWSHSFDIYKDSRDRDRCNGLCLWIVGEQGVCMFHYVTKKYDFCYTWVD
Sbjct: 61  TTLFYCTFQWPGWSHSFDIYKDSRDRDRCNGLCLWIVGEQGVCMFHYVTKKYDFCYTWVD 120

Query: 140 K 141
           K
Sbjct: 121 K 121

[Close]

BLAST of IVF0001648.1 vs. ExPASy TrEMBL
Match: A0A5A7UWN1 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold518G00420 PE=3 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 6.5e-54
Identity = 97/104 (93.27%), Postives = 100/104 (96.15%), Query Frame = 0


Query: 19  SLFTIEGKPFQNPLVTVNITNALTHKDQLTVHCKSGDDDLGVHQLQPLGGYAFTFRPNFI 78
           +LFT EGKPFQNPLVTVNITNALTHKDQLTVHCKS DDDLGVHQLQPLGGYAFTFRPNFI
Sbjct: 78  NLFTTEGKPFQNPLVTVNITNALTHKDQLTVHCKSADDDLGVHQLQPLGGYAFTFRPNFI 137

Query: 79  GTTLFYCTFQWPGWSHSFDIYKDSRDRDRCNGLCLWIVGEQGVC 123
           GTTLFYCTFQW GWS++FDIYKDSRDRDRCN LCLWIVGEQGVC
Sbjct: 138 GTTLFYCTFQWLGWSYNFDIYKDSRDRDRCNDLCLWIVGEQGVC 181

[Close]

BLAST of IVF0001648.1 vs. ExPASy TrEMBL
Match: A0A0A0LI28 (S-protein homolog OS=Cucumis sativus OX=3659 GN=Csa_2G162130 PE=3 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 3.4e-50
Identity = 97/139 (69.78%), Postives = 109/139 (78.42%), Query Frame = 0


Query: 1   MGSFSTFALCLLISIFFSSLFTIEGKPFQNPLVTVNITNALTH-KDQLTVHCKSGDDDLG 60
           M SFSTF L L IS+ F+++FTIEGKPFQ+P VTVNITNAL    +QLT+HCKSGDDDLG
Sbjct: 42  MSSFSTFGLSLFISLLFATIFTIEGKPFQSPPVTVNITNALKDVNNQLTIHCKSGDDDLG 101

Query: 61  VHQLQPLGGYAFTFRPNFIGTTLFYCTFQWPGWSHSFDIYKDSRDRDRCNG-LCLWIVGE 120
           VHQL  L  YAF FRPNF G+TLFYC F W G SH F+IY+D RDR +CN  LCLWIVGE
Sbjct: 102 VHQLSHLASYAFNFRPNFWGSTLFYCAFDWTGSSHYFNIYQDLRDRAKCNDTLCLWIVGE 161

Query: 121 QGVCMFHYVTKKYDFCYTW 138
           QG+CMF Y T  YD CYTW
Sbjct: 162 QGLCMFDYKTNAYDICYTW 180

[Close]

BLAST of IVF0001648.1 vs. ExPASy TrEMBL
Match: A0A6J1IDA7 (S-protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111474089 PE=3 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 5.0e-38
Identity = 78/111 (70.27%), Postives = 92/111 (82.88%), Query Frame = 0


Query: 13  ISIFFSSLF-TIEGKPFQNPLVTVNITNALTHKDQLTVHCKSGDDDLGVHQLQPLGGYAF 72
           +S+ F++LF TI+G  F++P +TVNITN L   +QLTVHCKSGDDDLG+HQL  LGGYAF
Sbjct: 1   MSLSFTTLFTTIDGSIFKDPPITVNITNVLESHNQLTVHCKSGDDDLGIHQLPYLGGYAF 60

Query: 73  TFRPNFIGTTLFYCTFQWPGWSHSFDIYKDSRDRDRCN-GLCLWIVGEQGV 122
           TFRPNF GTT FYCTFQWPG+S  FDIYKD RDR +CN  LCLWIVG+QG+
Sbjct: 61  TFRPNFWGTTQFYCTFQWPGFSQYFDIYKDYRDRIKCNKTLCLWIVGKQGI 111

[Close]

BLAST of IVF0001648.1 vs. ExPASy TrEMBL
Match: A0A1S3CDK4 (S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103499501 PE=3 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 1.1e-37
Identity = 73/107 (68.22%), Postives = 84/107 (78.50%), Query Frame = 0


Query: 33  VTVNITNALTH-KDQLTVHCKSGDDDLGVHQLQPLGGYAFTFRPNFIGTTLFYCTFQWPG 92
           +TVNITN ++   +QLTVHCKSGDDDLGVH+L  L  Y FTFRPNF G+TLFYC FQW  
Sbjct: 1   MTVNITNEISGVNNQLTVHCKSGDDDLGVHKLPHLVSYTFTFRPNFWGSTLFYCKFQWSS 60

Query: 93  WSHSFDIYKDSRDRDRCN-GLCLWIVGEQGVCMFHYVTKKYDFCYTW 138
           W H FDIYKDSRD  RCN  LCLWI+ E+G+CMF+Y TK YD+CY W
Sbjct: 61  WLHYFDIYKDSRDNLRCNQTLCLWIISEKGICMFNYDTKNYDYCYAW 107

[Close]

BLAST of IVF0001648.1 vs. NCBI nr
Match: XP_008465559.1 (PREDICTED: pumilio homolog 15-like, partial [Cucumis melo])

HSP 1 Score: 273 bits (699), Expect = 1.07e-92
Identity = 120/121 (99.17%), Postives = 121/121 (100.00%), Query Frame = 0


Query: 20  LFTIEGKPFQNPLVTVNITNALTHKDQLTVHCKSGDDDLGVHQLQPLGGYAFTFRPNFIG 79
           LFTIEGKPFQNPLVTVNITNALTHKDQLTVHCKSGDDDLG+HQLQPLGGYAFTFRPNFIG
Sbjct: 1   LFTIEGKPFQNPLVTVNITNALTHKDQLTVHCKSGDDDLGIHQLQPLGGYAFTFRPNFIG 60

Query: 80  TTLFYCTFQWPGWSHSFDIYKDSRDRDRCNGLCLWIVGEQGVCMFHYVTKKYDFCYTWVD 139
           TTLFYCTFQWPGWSHSFDIYKDSRDRDRCNGLCLWIVGEQGVCMFHYVTKKYDFCYTWVD
Sbjct: 61  TTLFYCTFQWPGWSHSFDIYKDSRDRDRCNGLCLWIVGEQGVCMFHYVTKKYDFCYTWVD 120

[Close]

BLAST of IVF0001648.1 vs. NCBI nr
Match: KAA0059530.1 (pumilio-like protein 15-like [Cucumis melo var. makuwa])

HSP 1 Score: 217 bits (552), Expect = 7.45e-69
Identity = 97/104 (93.27%), Postives = 100/104 (96.15%), Query Frame = 0


Query: 19  SLFTIEGKPFQNPLVTVNITNALTHKDQLTVHCKSGDDDLGVHQLQPLGGYAFTFRPNFI 78
           +LFT EGKPFQNPLVTVNITNALTHKDQLTVHCKS DDDLGVHQLQPLGGYAFTFRPNFI
Sbjct: 78  NLFTTEGKPFQNPLVTVNITNALTHKDQLTVHCKSADDDLGVHQLQPLGGYAFTFRPNFI 137

Query: 79  GTTLFYCTFQWPGWSHSFDIYKDSRDRDRCNGLCLWIVGEQGVC 122
           GTTLFYCTFQW GWS++FDIYKDSRDRDRCN LCLWIVGEQGVC
Sbjct: 138 GTTLFYCTFQWLGWSYNFDIYKDSRDRDRCNDLCLWIVGEQGVC 181

[Close]

BLAST of IVF0001648.1 vs. NCBI nr
Match: KGN61530.1 (hypothetical protein Csa_006387 [Cucumis sativus])

HSP 1 Score: 203 bits (517), Expect = 4.30e-64
Identity = 97/139 (69.78%), Postives = 109/139 (78.42%), Query Frame = 0


Query: 1   MGSFSTFALCLLISIFFSSLFTIEGKPFQNPLVTVNITNALTH-KDQLTVHCKSGDDDLG 60
           M SFSTF L L IS+ F+++FTIEGKPFQ+P VTVNITNAL    +QLT+HCKSGDDDLG
Sbjct: 42  MSSFSTFGLSLFISLLFATIFTIEGKPFQSPPVTVNITNALKDVNNQLTIHCKSGDDDLG 101

Query: 61  VHQLQPLGGYAFTFRPNFIGTTLFYCTFQWPGWSHSFDIYKDSRDRDRCNG-LCLWIVGE 120
           VHQL  L  YAF FRPNF G+TLFYC F W G SH F+IY+D RDR +CN  LCLWIVGE
Sbjct: 102 VHQLSHLASYAFNFRPNFWGSTLFYCAFDWTGSSHYFNIYQDLRDRAKCNDTLCLWIVGE 161

Query: 121 QGVCMFHYVTKKYDFCYTW 137
           QG+CMF Y T  YD CYTW
Sbjct: 162 QGLCMFDYKTNAYDICYTW 180

[Close]

BLAST of IVF0001648.1 vs. NCBI nr
Match: XP_023522352.1 (S-protein homolog 5-like, partial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 168 bits (425), Expect = 1.57e-50
Identity = 81/121 (66.94%), Postives = 97/121 (80.17%), Query Frame = 0


Query: 1   MGSFSTFALCLLISIFFSSLFT-IEGKPFQNPLVTVNITNALTHKDQLTVHCKSGDDDLG 60
           M SFST A  LL+S+FF++LFT I+G  F++P +TVNITN L   +QL V CKS DDDL 
Sbjct: 30  MNSFSTLAFALLMSLFFTTLFTTIDGSIFKDPPMTVNITNVLKSHNQLAVRCKSSDDDLR 89

Query: 61  VHQLQPLGGYAFTFRPNFIGTTLFYCTFQWPGWSHSFDIYKDSRDRDRCNG-LCLWIVGE 119
           +HQL PLGGYAFTF+PNF G+T FYCTF+W G+SH FDIYKD+RDR +CN  LCLWIVGE
Sbjct: 90  IHQLPPLGGYAFTFQPNFWGSTQFYCTFEWSGFSHYFDIYKDNRDRTKCNNTLCLWIVGE 149

[Close]

BLAST of IVF0001648.1 vs. NCBI nr
Match: XP_022975116.1 (S-protein homolog 3-like, partial [Cucurbita maxima] >XP_022975285.1 S-protein homolog 3-like, partial [Cucurbita maxima] >XP_022975441.1 S-protein homolog 3-like, partial [Cucurbita maxima])

HSP 1 Score: 164 bits (414), Expect = 2.17e-49
Identity = 78/110 (70.91%), Postives = 91/110 (82.73%), Query Frame = 0


Query: 14  SIFFSSLFT-IEGKPFQNPLVTVNITNALTHKDQLTVHCKSGDDDLGVHQLQPLGGYAFT 73
           S+ F++LFT I+G  F++P +TVNITN L   +QLTVHCKSGDDDLG+HQL  LGGYAFT
Sbjct: 2   SLSFTTLFTTIDGSIFKDPPITVNITNVLESHNQLTVHCKSGDDDLGIHQLPYLGGYAFT 61

Query: 74  FRPNFIGTTLFYCTFQWPGWSHSFDIYKDSRDRDRCNG-LCLWIVGEQGV 121
           FRPNF GTT FYCTFQWPG+S  FDIYKD RDR +CN  LCLWIVG+QG+
Sbjct: 62  FRPNFWGTTQFYCTFQWPGFSQYFDIYKDYRDRIKCNKTLCLWIVGKQGI 111

[Close]

BLAST of IVF0001648.1 vs. TAIR 10
Match: AT4G16195.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 110.9 bits (276), Expect = 8.2e-25
Identity = 51/108 (47.22%), Postives = 67/108 (62.04%), Query Frame = 0


Query: 34  TVNITNALTHKDQLTVHCKSGDDDLGVHQLQPLGGYAFTFRPNFIGTTLFYCTFQWPGWS 93
           TV I N L ++  L  HCKS DDDLG   LQP   ++F+F   F G TL++C+F WP  S
Sbjct: 49  TVEINNDLGNQLTLLYHCKSKDDDLGNRTLQPGESWSFSFGRQFFGRTLYFCSFSWPNES 108

Query: 94  HSFDIYKDSRDR---DRC-NGLCLWIVGEQGVCMFHYVTKKYDFCYTW 138
           HSFDIYKD RD    ++C +  C+W +   G C F+  TK++D CY W
Sbjct: 109 HSFDIYKDHRDSGGDNKCESDRCVWKIRRNGPCRFNDETKQFDLCYPW 156

[Close]

BLAST of IVF0001648.1 vs. TAIR 10
Match: AT5G12060.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 108.6 bits (270), Expect = 4.1e-24
Identity = 58/130 (44.62%), Postives = 72/130 (55.38%), Query Frame = 0


Query: 11  LLISIFFSSLFTIEGKPFQNPLVTVNITNALTHKDQLTVHCKSGDDDLGVHQLQPLGGYA 70
           LLI I FS + T     +    + V ITN L     L +HCKS DDDLG+  L P G ++
Sbjct: 16  LLIKIAFSQVKTDFDVNWSTSKM-VRITNRLGDGLTLNLHCKSADDDLGLKILAPNGSWS 75

Query: 71  FTFRPNFIGTTLFYCTFQWPGWSHSFDIYKDSRDRDRCNGL---CLWIVGEQGVCMFHYV 130
           F FR + +GTTLFYC F WPG S  FDIY D RD  R +     C+W +  QG CMF   
Sbjct: 76  FKFRTSIVGTTLFYCHFTWPGQSKRFDIYDDDRDGVRSHISCINCIWDISIQGPCMFSES 135

Query: 131 TKKYDFCYTW 138
              ++ CY W
Sbjct: 136 DHAFNICYDW 144

[Close]

BLAST of IVF0001648.1 vs. TAIR 10
Match: AT5G12070.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 104.4 bits (259), Expect = 7.7e-23
Identity = 54/131 (41.22%), Postives = 70/131 (53.44%), Query Frame = 0


Query: 11  LLISIFFSSLFTIEGKPFQNPLVTVNITNALTHKDQLTVHCKSGDDDLGVHQLQPLGGYA 70
           LLI I FS +       +      V ITN L     L +HCKS DDDLG+  L P G ++
Sbjct: 16  LLIQIAFSQVKPGSDLKWSTLKSVVTITNRLGDGSTLKLHCKSADDDLGLKILAPNGSWS 75

Query: 71  FTFRPNFI-GTTLFYCTFQWPGWSHSFDIYKDSRDRDRCN---GLCLWIVGEQGVCMFHY 130
           F FRP+ + G TLF+C F WPG S  F+IY D RD  R       C+W +G+ G C F  
Sbjct: 76  FKFRPSIVPGVTLFFCHFTWPGQSKWFNIYDDDRDGVRMGIPCIYCIWDIGKYGPCRFSE 135

Query: 131 VTKKYDFCYTW 138
           +   ++ CY W
Sbjct: 136 IDDAFNICYDW 146

[Close]

BLAST of IVF0001648.1 vs. TAIR 10
Match: AT3G17080.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 95.9 bits (237), Expect = 2.7e-20
Identity = 54/141 (38.30%), Postives = 72/141 (51.06%), Query Frame = 0


Query: 1   MGSFSTFALCLLISIFFSSLFTIEGKPFQNPLVTVNITNALTHKDQLTVHCKSGDDDLGV 60
           MGS  T  L  ++ +F S++ +           +V I N L     L  HCKS +DDLG 
Sbjct: 1   MGSLETCLLFFVMVMFMSAIMS-------RASTSVVIYNDLGGGLPLRHHCKSREDDLGY 60

Query: 61  HQLQPLGGYAFTFRPNFIGTTLFYCTFQWPGWSHSFDIYKDSRDRD----RCNGLCLWIV 120
             L P   ++F F P+  G TLFYC F W   SH FDIYK SRD++     C   C W +
Sbjct: 61  QSLAPGRSWSFGFTPDIFGRTLFYCRFSWGAESHIFDIYKQSRDKEFQEFGCK-KCEWKI 120

Query: 121 GEQGVCMFHYVTKKYDFCYTW 138
            + G C F+  T  +D CY+W
Sbjct: 121 RKNGPCKFYKKTGMFDHCYSW 133

[Close]

BLAST of IVF0001648.1 vs. TAIR 10
Match: AT3G16970.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 89.7 bits (221), Expect = 2.0e-18
Identity = 50/135 (37.04%), Postives = 67/135 (49.63%), Query Frame = 0


Query: 9   LCLLISIFFSSLFTIEGKP---FQNPLVTVNITNALTHKDQLTVHCKSGDDDLGVHQLQP 68
           +C+ ++I      +I   P   F NP  TV I N L     L  HCKS +DDLG   +  
Sbjct: 1   MCVSVTISRGQKDSIPPTPTSGFDNPRTTVVIYNDLGGHLPLRYHCKSKNDDLGDRNMAV 60

Query: 69  LGGYAFTFRPNFIGTTLFYCTFQWPGWSHSFDIYKDSRDRDRCN---GLCLWIVGEQGVC 128
            G ++F FRP+  G TLF+C F W    H FDIYK SRDR+        C W + + G C
Sbjct: 61  NGTWSFEFRPSVFGGTLFFCGFIWDKELHWFDIYKQSRDREFAEFGCRRCEWKIRKDGPC 120

Query: 129 MFHYVTKKYDFCYTW 138
             +  +  +D C  W
Sbjct: 121 KLNKNSNMFDVCLPW 135

The following BLAST results are available for this feature:

BLAST of IVF0001648.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JLQ5	1.2e-23	47.22	S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1	[more]
Q9FMQ4	5.8e-23	44.62	S-protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=SPH3 PE=2 SV=1	[more]
F4JZG1	1.1e-21	41.22	S-protein homolog 4 OS=Arabidopsis thaliana OX=3702 GN=SPH4 PE=3 SV=1	[more]
P0DN93	4.0e-16	35.04	S-protein homolog 29 OS=Arabidopsis thaliana OX=3702 GN=SPH29 PE=3 SV=1	[more]
O23020	2.2e-14	37.50	S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1	[more]

BLAST of IVF0001648.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CP53	5.9e-71	99.17	S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103503190 PE=3 SV=1	[more]
A0A5A7UWN1	6.5e-54	93.27	S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold518G00...	[more]
A0A0A0LI28	3.4e-50	69.78	S-protein homolog OS=Cucumis sativus OX=3659 GN=Csa_2G162130 PE=3 SV=1	[more]
A0A6J1IDA7	5.0e-38	70.27	S-protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111474089 PE=3 SV=1	[more]
A0A1S3CDK4	1.1e-37	68.22	S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103499501 PE=3 SV=1	[more]

BLAST of IVF0001648.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008465559.1	1.07e-92	99.17	PREDICTED: pumilio homolog 15-like, partial [Cucumis melo]	[more]
KAA0059530.1	7.45e-69	93.27	pumilio-like protein 15-like [Cucumis melo var. makuwa]	[more]
KGN61530.1	4.30e-64	69.78	hypothetical protein Csa_006387 [Cucumis sativus]	[more]
XP_023522352.1	1.57e-50	66.94	S-protein homolog 5-like, partial [Cucurbita pepo subsp. pepo]	[more]
XP_022975116.1	2.17e-49	70.91	S-protein homolog 3-like, partial [Cucurbita maxima] >XP_022975285.1 S-protein h...	[more]

BLAST of IVF0001648.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16195.1	8.2e-25	47.22	Plant self-incompatibility protein S1 family	[more]
AT5G12060.1	4.1e-24	44.62	Plant self-incompatibility protein S1 family	[more]
AT5G12070.1	7.7e-23	41.22	Plant self-incompatibility protein S1 family	[more]
AT3G17080.1	2.7e-20	38.30	Plant self-incompatibility protein S1 family	[more]
AT3G16970.1	2.0e-18	37.04	Plant self-incompatibility protein S1 family	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010264	Plant self-incompatibility S1	PFAM	PF05938	Self-incomp_S1	coord: 34..137 e-value: 1.1E-32 score: 112.6
IPR010264	Plant self-incompatibility S1	PANTHER	PTHR31232	FAMILY NOT NAMED	coord: 7..137
None	No IPR available	PANTHER	PTHR31232:SF76	S-PROTEIN HOMOLOG 2	coord: 7..137
IPR008972	Cupredoxin	SUPERFAMILY	49503	Cupredoxins	coord: 19..87

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
IVF0001648	IVF0001648	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0001648.1-exon	IVF0001648.1-exon-chr01:7639858..7640280	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0001648.1-cds	IVF0001648.1-cds-chr01:7639858..7640280	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
IVF0001648.1	IVF0001648.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0060320	rejection of self pollen
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016020	membrane