IVF0001550.1 (mRNA) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTTCTTTTTCTTGGATTTGAAATTCAATTGGGTTCCAAATTTCCATCAATGTCCATTCCTGAACTGCCATTTTCACCTTCTAATCCAAAGGTTCAGAGAGTGTCAAAATCCACTTCAGACAGGTTGCTTCAGAAATTCTTCGATGCTACTGAATTTGGATTTGATTACGAGAGAAGTGGGCTGTGGTCTCCCCCTCTTCAACGCACTGTTTATTTAACTTCTTCGGGTCAAGTCCTCAATCAAACGGATTTACATACAAAACTTCAGACGGTCTTGAATTCTCGAAGTAGAACACATAAAAGTTGTTTCAAATTCAGAGTAAGCCGCTTCCTTTACCTCTTTTTTTTTTTTTTTTTCTTTCTTTTGTTTCTCTTTTAATCTTGTTTTCTTTTCACTATTGCCTTTAGATTTTATAAAATCCCAATTCATACATTGGTTTAATTTCGTGTTTTAGAATTAGATGTTTGCAGTTTATATGTTGTAGGTGTTTTGGTGCTATGTGAAGCAAATCTGAAAGCTGGAATTTTTATTGCTTCTAATGGCTTCAATTTTTTACCGAACGCGATGGATGATAATGGAGTTTCATAGTCCCACTCCCAGCCAAAACAAAAGCAGAAGGGGTCCCCCAAAGAAGGAGAAAAAACCCATCCTA GTTCTTTTTCTTGGATTTGAAATTCAATTGGGTTCCAAATTTCCATCAATGTCCATTCCTGAACTGCCATTTTCACCTTCTAATCCAAAGGTTCAGAGAGTGTCAAAATCCACTTCAGACAGGTTGCTTCAGAAATTCTTCGATGCTACTGAATTTGGATTTGATTACGAGAGAAGTGGGCTGTGGTCTCCCCCTCTTCAACGCACTGTTTATTTAACTTCTTCGGGTCAAGTCCTCAATCAAACGGATTTACATACAAAACTTCAGACGGTCTTGAATTCTCGAAGTAGAACACATAAAAGTTGTTTCAAATTCAGAGTGTTTTGGTGCTATGTGAAGCAAATCTGAAAGCTGGAATTTTTATTGCTTCTAATGGCTTCAATTTTTTACCGAACGCGATGGATGATAATGGAGTTTCATAGTCCCACTCCCAGCCAAAACAAAAGCAGAAGGGGTCCCCCAAAGAAGGAGAAAAAACCCATCCTA ATGTCCATTCCTGAACTGCCATTTTCACCTTCTAATCCAAAGGTTCAGAGAGTGTCAAAATCCACTTCAGACAGGTTGCTTCAGAAATTCTTCGATGCTACTGAATTTGGATTTGATTACGAGAGAAGTGGGCTGTGGTCTCCCCCTCTTCAACGCACTGTTTATTTAACTTCTTCGGGTCAAGTCCTCAATCAAACGGATTTACATACAAAACTTCAGACGGTCTTGAATTCTCGAAGTAGAACACATAAAAGTTGTTTCAAATTCAGAGTGTTTTGGTGCTATGTGAAGCAAATCTGA MSIPELPFSPSNPKVQRVSKSTSDRLLQKFFDATEFGFDYERSGLWSPPLQRTVYLTSSGQVLNQTDLHTKLQTVLNSRSRTHKSCFKFRVFWCYVKQI Homology
BLAST of IVF0001550.1 vs. ExPASy TrEMBL
Match: A0A0A0KLQ8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G519730 PE=4 SV=1) HSP 1 Score: 205.3 bits (521), Expect = 1.2e-49 Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0
BLAST of IVF0001550.1 vs. ExPASy TrEMBL
Match: A0A5E4G6M2 (Uncharacterized protein OS=Prunus dulcis OX=3755 GN=ALMOND_2B006265 PE=4 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 3.3e-20 Identity = 49/86 (56.98%), Postives = 66/86 (76.74%), Query Frame = 0
BLAST of IVF0001550.1 vs. ExPASy TrEMBL
Match: A0A314YAR0 (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_33883 PE=4 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 1.3e-19 Identity = 48/85 (56.47%), Postives = 65/85 (76.47%), Query Frame = 0
BLAST of IVF0001550.1 vs. ExPASy TrEMBL
Match: A0A314ZRE6 (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_19857 PE=4 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 1.3e-19 Identity = 48/85 (56.47%), Postives = 65/85 (76.47%), Query Frame = 0
BLAST of IVF0001550.1 vs. ExPASy TrEMBL
Match: A0A6P5SBA8 (uncharacterized protein LOC110756101 isoform X1 OS=Prunus avium OX=42229 GN=LOC110756101 PE=4 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 1.3e-19 Identity = 48/85 (56.47%), Postives = 65/85 (76.47%), Query Frame = 0
BLAST of IVF0001550.1 vs. NCBI nr
Match: KAE8647723.1 (hypothetical protein Csa_003961 [Cucumis sativus]) HSP 1 Score: 185 bits (470), Expect = 8.66e-59 Identity = 91/94 (96.81%), Postives = 91/94 (96.81%), Query Frame = 0
BLAST of IVF0001550.1 vs. NCBI nr
Match: XP_038892892.1 (uncharacterized protein LOC120081796 [Benincasa hispida]) HSP 1 Score: 177 bits (448), Expect = 3.05e-55 Identity = 88/106 (83.02%), Postives = 92/106 (86.79%), Query Frame = 0
BLAST of IVF0001550.1 vs. NCBI nr
Match: KAG6581370.1 (hypothetical protein SDJN03_21372, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 157 bits (396), Expect = 2.08e-47 Identity = 78/107 (72.90%), Postives = 90/107 (84.11%), Query Frame = 0
BLAST of IVF0001550.1 vs. NCBI nr
Match: KAG7034657.1 (hypothetical protein SDJN02_04387 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 140 bits (354), Expect = 4.22e-40 Identity = 71/98 (72.45%), Postives = 82/98 (83.67%), Query Frame = 0
BLAST of IVF0001550.1 vs. NCBI nr
Match: KAG7026513.1 (hypothetical protein SDJN02_10515, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 118 bits (296), Expect = 3.46e-32 Identity = 62/82 (75.61%), Postives = 68/82 (82.93%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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