IVF0001550 (gene) Melon (IVF77) v1

Overview
NameIVF0001550
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr08: 1395417 .. 1396068 (-)
RNA-Seq ExpressionIVF0001550
SyntenyIVF0001550
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTCTTTTTCTTGGATTTGAAATTCAATTGGGTTCCAAATTTCCATCAATGTCCATTCCTGAACTGCCATTTTCACCTTCTAATCCAAAGGTTCAGAGAGTGTCAAAATCCACTTCAGACAGGTTGCTTCAGAAATTCTTCGATGCTACTGAATTTGGATTTGATTACGAGAGAAGTGGGCTGTGGTCTCCCCCTCTTCAACGCACTGTTTATTTAACTTCTTCGGGTCAAGTCCTCAATCAAACGGATTTACATACAAAACTTCAGACGGTCTTGAATTCTCGAAGTAGAACACATAAAAGTTGTTTCAAATTCAGAGTAAGCCGCTTCCTTTACCTCTTTTTTTTTTTTTTTTTCTTTCTTTTGTTTCTCTTTTAATCTTGTTTTCTTTTCACTATTGCCTTTAGATTTTATAAAATCCCAATTCATACATTGGTTTAATTTCGTGTTTTAGAATTAGATGTTTGCAGTTTATATGTTGTAGGTGTTTTGGTGCTATGTGAAGCAAATCTGAAAGCTGGAATTTTTATTGCTTCTAATGGCTTCAATTTTTTACCGAACGCGATGGATGATAATGGAGTTTCATAGTCCCACTCCCAGCCAAAACAAAAGCAGAAGGGGTCCCCCAAAGAAGGAGAAAAAACCCATCCTA

mRNA sequence

GTTCTTTTTCTTGGATTTGAAATTCAATTGGGTTCCAAATTTCCATCAATGTCCATTCCTGAACTGCCATTTTCACCTTCTAATCCAAAGGTTCAGAGAGTGTCAAAATCCACTTCAGACAGGTTGCTTCAGAAATTCTTCGATGCTACTGAATTTGGATTTGATTACGAGAGAAGTGGGCTGTGGTCTCCCCCTCTTCAACGCACTGTTTATTTAACTTCTTCGGGTCAAGTCCTCAATCAAACGGATTTACATACAAAACTTCAGACGGTCTTGAATTCTCGAAGTAGAACACATAAAAGTTGTTTCAAATTCAGAGTGTTTTGGTGCTATGTGAAGCAAATCTGAAAGCTGGAATTTTTATTGCTTCTAATGGCTTCAATTTTTTACCGAACGCGATGGATGATAATGGAGTTTCATAGTCCCACTCCCAGCCAAAACAAAAGCAGAAGGGGTCCCCCAAAGAAGGAGAAAAAACCCATCCTA

Coding sequence (CDS)

ATGTCCATTCCTGAACTGCCATTTTCACCTTCTAATCCAAAGGTTCAGAGAGTGTCAAAATCCACTTCAGACAGGTTGCTTCAGAAATTCTTCGATGCTACTGAATTTGGATTTGATTACGAGAGAAGTGGGCTGTGGTCTCCCCCTCTTCAACGCACTGTTTATTTAACTTCTTCGGGTCAAGTCCTCAATCAAACGGATTTACATACAAAACTTCAGACGGTCTTGAATTCTCGAAGTAGAACACATAAAAGTTGTTTCAAATTCAGAGTGTTTTGGTGCTATGTGAAGCAAATCTGA

Protein sequence

MSIPELPFSPSNPKVQRVSKSTSDRLLQKFFDATEFGFDYERSGLWSPPLQRTVYLTSSGQVLNQTDLHTKLQTVLNSRSRTHKSCFKFRVFWCYVKQI
Homology
BLAST of IVF0001550 vs. ExPASy TrEMBL
Match: A0A0A0KLQ8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G519730 PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 1.2e-49
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0

Query: 1   MSIPELPFSPSNPKVQRVSKSTSDRLLQKFFDATEFGFDYERSGLWSPPLQRTVYLTSSG 60
           MSIPELPFSPSNPKVQRVSKSTSDRLLQKFFDATEFGFDYERSGLWSPPLQRTVYLTSSG
Sbjct: 1   MSIPELPFSPSNPKVQRVSKSTSDRLLQKFFDATEFGFDYERSGLWSPPLQRTVYLTSSG 60

Query: 61  QVLNQTDLHTKLQTVLNSRSRTHKSCFKFRVFWCYVKQI 100
           QVLNQTDLHTKLQTVLNSRSRTHKSCFKFRVFWCYVKQI
Sbjct: 61  QVLNQTDLHTKLQTVLNSRSRTHKSCFKFRVFWCYVKQI 99

BLAST of IVF0001550 vs. ExPASy TrEMBL
Match: A0A5E4G6M2 (Uncharacterized protein OS=Prunus dulcis OX=3755 GN=ALMOND_2B006265 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 3.3e-20
Identity = 49/86 (56.98%), Postives = 66/86 (76.74%), Query Frame = 0

Query: 10  PSNPKVQRVSKSTSDRLLQKFFDATEFGFDYERSGLWSPPLQRTVYLTSSGQVLNQTDLH 69
           P+ P VQ V KSTSDRLLQKFFDA EF FDYE+SGLWSPP++RTV+L+S G++  + ++ 
Sbjct: 25  PTAPMVQWVPKSTSDRLLQKFFDAAEFDFDYEQSGLWSPPVKRTVFLSSQGRIFTEQEML 84

Query: 70  TKLQTVLNSRSRTHKSCFKFRVFWCY 96
            KL T+ ++ + THK+C   R FWC+
Sbjct: 85  AKLSTLTDAPTSTHKAC--CRAFWCF 108

BLAST of IVF0001550 vs. ExPASy TrEMBL
Match: A0A314YAR0 (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_33883 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 1.3e-19
Identity = 48/85 (56.47%), Postives = 65/85 (76.47%), Query Frame = 0

Query: 10  PSNPKVQRVSKSTSDRLLQKFFDATEFGFDYERSGLWSPPLQRTVYLTSSGQVLNQTDLH 69
           P+ P VQ V KSTSDRLLQKFFDA EF FDYE+SGLWSPP++RTV+L+S G++  + ++ 
Sbjct: 25  PTAPMVQLVPKSTSDRLLQKFFDAAEFDFDYEQSGLWSPPVKRTVFLSSQGRIFTEQEML 84

Query: 70  TKLQTVLNSRSRTHKSCFKFRVFWC 95
            KL T++++ +  HK+C   R FWC
Sbjct: 85  AKLSTLMDAPTSKHKAC--CRAFWC 107

BLAST of IVF0001550 vs. ExPASy TrEMBL
Match: A0A314ZRE6 (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_19857 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 1.3e-19
Identity = 48/85 (56.47%), Postives = 65/85 (76.47%), Query Frame = 0

Query: 10  PSNPKVQRVSKSTSDRLLQKFFDATEFGFDYERSGLWSPPLQRTVYLTSSGQVLNQTDLH 69
           P+ P VQ V KSTSDRLLQKFFDA EF FDYE+SGLWSPP++RTV+L+S G++  + ++ 
Sbjct: 25  PTAPMVQLVPKSTSDRLLQKFFDAAEFDFDYEQSGLWSPPVKRTVFLSSQGRIFTEQEML 84

Query: 70  TKLQTVLNSRSRTHKSCFKFRVFWC 95
            KL T++++ +  HK+C   R FWC
Sbjct: 85  AKLSTLMDAPTSKHKAC--CRAFWC 107

BLAST of IVF0001550 vs. ExPASy TrEMBL
Match: A0A6P5SBA8 (uncharacterized protein LOC110756101 isoform X1 OS=Prunus avium OX=42229 GN=LOC110756101 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 1.3e-19
Identity = 48/85 (56.47%), Postives = 65/85 (76.47%), Query Frame = 0

Query: 10  PSNPKVQRVSKSTSDRLLQKFFDATEFGFDYERSGLWSPPLQRTVYLTSSGQVLNQTDLH 69
           P+ P VQ V KSTSDRLLQKFFDA EF FDYE+SGLWSPP++RTV+L+S G++  + ++ 
Sbjct: 25  PTAPMVQLVPKSTSDRLLQKFFDAAEFDFDYEQSGLWSPPVKRTVFLSSQGKIFTEQEML 84

Query: 70  TKLQTVLNSRSRTHKSCFKFRVFWC 95
            KL T++++ +  HK+C   R FWC
Sbjct: 85  AKLSTLMDAPTSKHKAC--CRAFWC 107

BLAST of IVF0001550 vs. NCBI nr
Match: KAE8647723.1 (hypothetical protein Csa_003961 [Cucumis sativus])

HSP 1 Score: 185 bits (470), Expect = 8.66e-59
Identity = 91/94 (96.81%), Postives = 91/94 (96.81%), Query Frame = 0

Query: 1  MSIPELPFSPSNPKVQRVSKSTSDRLLQKFFDATEFGFDYERSGLWSPPLQRTVYLTSSG 60
          MSIPELPFSPSNPKVQRVSKSTSDRLLQKFFDATEFGFDYERSGLWSPPLQRTVYLTSSG
Sbjct: 1  MSIPELPFSPSNPKVQRVSKSTSDRLLQKFFDATEFGFDYERSGLWSPPLQRTVYLTSSG 60

Query: 61 QVLNQTDLHTKLQTVLNSRSRTHKSCFKFRVFWC 94
          QVLNQTDLHTKLQTVLNSRSRTHKSCFKFR   C
Sbjct: 61 QVLNQTDLHTKLQTVLNSRSRTHKSCFKFRFKCC 94

BLAST of IVF0001550 vs. NCBI nr
Match: XP_038892892.1 (uncharacterized protein LOC120081796 [Benincasa hispida])

HSP 1 Score: 177 bits (448), Expect = 3.05e-55
Identity = 88/106 (83.02%), Postives = 92/106 (86.79%), Query Frame = 0

Query: 1   MSIPELPFSPSN---------PKVQRVSKSTSDRLLQKFFDATEFGFDYERSGLWSPPLQ 60
           MSIP+LPFSPSN         PKVQRVSKSTSDRLLQKFFDATEFGFDYE SGLWSPPLQ
Sbjct: 1   MSIPQLPFSPSNFIATSNNNTPKVQRVSKSTSDRLLQKFFDATEFGFDYETSGLWSPPLQ 60

Query: 61  RTVYLTSSGQVLNQTDLHTKLQTVLNSRSRTHKSCFKFRVFWCYVK 97
           R+VYL+SSGQV NQTDLHTKLQTVLNSR R HKSCFKFRVFWC V+
Sbjct: 61  RSVYLSSSGQVFNQTDLHTKLQTVLNSRRRRHKSCFKFRVFWCSVR 106

BLAST of IVF0001550 vs. NCBI nr
Match: KAG6581370.1 (hypothetical protein SDJN03_21372, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 157 bits (396), Expect = 2.08e-47
Identity = 78/107 (72.90%), Postives = 90/107 (84.11%), Query Frame = 0

Query: 1   MSIPELPFSPSN-------PKVQRVSKSTSDRLLQKFFDATEFGFDYERSGLWSPPLQRT 60
           MSIPELPFSPSN       P VQ+VSK+TSDRLLQKFFDATEFGFDYERSGLWSPPLQR+
Sbjct: 1   MSIPELPFSPSNFIATSHTPTVQKVSKATSDRLLQKFFDATEFGFDYERSGLWSPPLQRS 60

Query: 61  VYLTSSGQVLNQTDLHTKLQTVLNSRSRTHKSC-FKFRVFWCYVKQI 99
           VYL++SG+V NQ DLH KL++VL+SR +  + C FKFRVFWC V+QI
Sbjct: 61  VYLSASGEVFNQADLHRKLESVLSSRRKREEKCRFKFRVFWCSVRQI 107

BLAST of IVF0001550 vs. NCBI nr
Match: KAG7034657.1 (hypothetical protein SDJN02_04387 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 140 bits (354), Expect = 4.22e-40
Identity = 71/98 (72.45%), Postives = 82/98 (83.67%), Query Frame = 0

Query: 1  MSIPELPFSPSN-------PKVQRVSKSTSDRLLQKFFDATEFGFDYERSGLWSPPLQRT 60
          MSIPELPFSPSN       P VQ+VSK+TSDRLLQKFFDATEFGFDYERSGLWSPPLQR+
Sbjct: 1  MSIPELPFSPSNFIATSHTPTVQKVSKATSDRLLQKFFDATEFGFDYERSGLWSPPLQRS 60

Query: 61 VYLTSSGQVLNQTDLHTKLQTVLNSRSRTHKSC-FKFR 90
          VYL++SG+V NQ DLH KL++VL+SR +  + C FKFR
Sbjct: 61 VYLSASGEVFNQADLHRKLESVLSSRRKREEKCRFKFR 98

BLAST of IVF0001550 vs. NCBI nr
Match: KAG7026513.1 (hypothetical protein SDJN02_10515, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 118 bits (296), Expect = 3.46e-32
Identity = 62/82 (75.61%), Postives = 68/82 (82.93%), Query Frame = 0

Query: 11 SNPK-VQRVSKSTSDRLLQKFFDATEFGFDYERSGLWSPPLQRTVYLTSSGQVLNQTDLH 70
          + PK VQRV KSTSDRLLQKF DATEFGFDY+ SGLWSPPLQRTVYL+SSG+V N TDL 
Sbjct: 7  ATPKLVQRVPKSTSDRLLQKFCDATEFGFDYDTSGLWSPPLQRTVYLSSSGRVFNPTDLQ 66

Query: 71 TKLQTVLNS-RSRTHKSCFKFR 90
           KL+ VL+S RSR   SCFKFR
Sbjct: 67 RKLENVLSSDRSRRETSCFKFR 88

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KLQ81.2e-49100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G519730 PE=4 SV=1[more]
A0A5E4G6M23.3e-2056.98Uncharacterized protein OS=Prunus dulcis OX=3755 GN=ALMOND_2B006265 PE=4 SV=1[more]
A0A314YAR01.3e-1956.47Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_338... [more]
A0A314ZRE61.3e-1956.47Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_198... [more]
A0A6P5SBA81.3e-1956.47uncharacterized protein LOC110756101 isoform X1 OS=Prunus avium OX=42229 GN=LOC1... [more]
Match NameE-valueIdentityDescription
KAE8647723.18.66e-5996.81hypothetical protein Csa_003961 [Cucumis sativus][more]
XP_038892892.13.05e-5583.02uncharacterized protein LOC120081796 [Benincasa hispida][more]
KAG6581370.12.08e-4772.90hypothetical protein SDJN03_21372, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7034657.14.22e-4072.45hypothetical protein SDJN02_04387 [Cucurbita argyrosperma subsp. argyrosperma][more]
KAG7026513.13.46e-3275.61hypothetical protein SDJN02_10515, partial [Cucurbita argyrosperma subsp. argyro... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availablePANTHERPTHR34287OS06G0551500 PROTEIN-RELATEDcoord: 10..94
NoneNo IPR availablePANTHERPTHR34287:SF2OS06G0551500 PROTEINcoord: 10..94

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0001550.1IVF0001550.1mRNA