HG10019158.1 (mRNA) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGCTCGTCCCTCCGCCATTCTGAGCGTCGTGCTGGTGGCGCTGCTGCTCGTTTGTGTCGCTAATGCACACGAGGGCCACGTGCATCCTCCGTCCTCCGAGCCCCATGCCGCCCCTCCGCCGGGACACAACGCGGCCGTCATGAACAGCCTTTCATACTTTTGGTCTATGGCAATGGCCATGGTGGCTACGTCTTGGATGCTGTTTTAA ATGGCAGCTCGTCCCTCCGCCATTCTGAGCGTCGTGCTGGTGGCGCTGCTGCTCGTTTGTGTCGCTAATGCACACGAGGGCCACGTGCATCCTCCGTCCTCCGAGCCCCATGCCGCCCCTCCGCCGGGACACAACGCGGCCGTCATGAACAGCCTTTCATACTTTTGGTCTATGGCAATGGCCATGGTGGCTACGTCTTGGATGCTGTTTTAA ATGGCAGCTCGTCCCTCCGCCATTCTGAGCGTCGTGCTGGTGGCGCTGCTGCTCGTTTGTGTCGCTAATGCACACGAGGGCCACGTGCATCCTCCGTCCTCCGAGCCCCATGCCGCCCCTCCGCCGGGACACAACGCGGCCGTCATGAACAGCCTTTCATACTTTTGGTCTATGGCAATGGCCATGGTGGCTACGTCTTGGATGCTGTTTTAA MAARPSAILSVVLVALLLVCVANAHEGHVHPPSSEPHAAPPPGHNAAVMNSLSYFWSMAMAMVATSWMLF Homology
BLAST of HG10019158.1 vs. NCBI nr
Match: KGN53725.1 (hypothetical protein Csa_014716 [Cucumis sativus]) HSP 1 Score: 113.6 bits (283), Expect = 6.8e-22 Identity = 56/69 (81.16%), Postives = 63/69 (91.30%), Query Frame = 0
BLAST of HG10019158.1 vs. NCBI nr
Match: KAG6576850.1 (hypothetical protein SDJN03_24424, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 112.1 bits (279), Expect = 2.0e-21 Identity = 59/71 (83.10%), Postives = 65/71 (91.55%), Query Frame = 0
BLAST of HG10019158.1 vs. NCBI nr
Match: KAG7030901.1 (Bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 110.2 bits (274), Expect = 7.5e-21 Identity = 57/70 (81.43%), Postives = 60/70 (85.71%), Query Frame = 0
BLAST of HG10019158.1 vs. NCBI nr
Match: TYK29918.1 (hypothetical protein E5676_scaffold652G00020 [Cucumis melo var. makuwa]) HSP 1 Score: 107.8 bits (268), Expect = 3.7e-20 Identity = 55/70 (78.57%), Postives = 60/70 (85.71%), Query Frame = 0
BLAST of HG10019158.1 vs. NCBI nr
Match: KAA0061157.1 (hypothetical protein E6C27_scaffold753G00260 [Cucumis melo var. makuwa]) HSP 1 Score: 106.3 bits (264), Expect = 1.1e-19 Identity = 54/70 (77.14%), Postives = 60/70 (85.71%), Query Frame = 0
BLAST of HG10019158.1 vs. ExPASy TrEMBL
Match: A0A0A0KVS3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G111600 PE=4 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 3.3e-22 Identity = 56/69 (81.16%), Postives = 63/69 (91.30%), Query Frame = 0
BLAST of HG10019158.1 vs. ExPASy TrEMBL
Match: A0A5D3E2A2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold652G00020 PE=4 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 1.8e-20 Identity = 55/70 (78.57%), Postives = 60/70 (85.71%), Query Frame = 0
BLAST of HG10019158.1 vs. ExPASy TrEMBL
Match: A0A5A7V2Q5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold753G00260 PE=4 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 5.3e-20 Identity = 54/70 (77.14%), Postives = 60/70 (85.71%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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