HG10018359.1 (mRNA) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10018359.1
Type	mRNA
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	elongation factor 1-delta-like
Location	Chr04: 3451608 .. 3454172 (+)
Sequence length	696
RNA-Seq Expression	HG10018359.1
Synteny	HG10018359.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCGTCCTCAGGTATCAACCTTCAAAGGATGACGTTACAGTTTACGAAGCGCTCTCCAAACCGGTATCCAGTGAATATGTTAACGTGTCTAGGTGGTGTAATCACATCGAAGCACTCTTGAGAGTTTCGTAAGTCATCGAAATTCTTAATTTTTTGGGTTGGTTTTATAGAATTCTTATTTATGCTTATGGTTTCATTCACTATTTGTTCTGTAACCACTGGGTTTGATAATGGTTTTTAGCGCTGTTTTTGGGGAGGGTTCGGGTGTTAAGTTCGATGCAATTGCAACCCCACCTGCTGCAGATGCAAAGGTGAAAACTTTACCTAGTGTTTCCTTTATATGTTATGTGTGCTGAGACGTGACATTGTCTCTTGGTGCATACTCCATGCTTTTGTTAGCCTTGCTTTATTTTTTCATCTAATTATAGTTGGTGTACACCAAATTTCATCAGGGTGCCGATGACGACGACGACGATGACATGGACCTATTTGGTGAAGAGACCGAAGAGGAAAAGAAGGCTGCTGAAGAGCGTGCAGCTTCCATTAAGGCTTCTGCAAAGAAGAAAGAAAGTAAGTTTCATTTACCATCAATCTTGGACTCGTTTTATATTGTCCAGTGATTTTAATGATGTCTATTTGGTGTTTGTTTTAGGTGGCAAATCATCAGTTCTGATGGATATCAAACCTTGGGATGACGAAACTGACATGAAGAAACTTGAAGAGGCTGTAAGAAGCGTTCAGATGGAAGGCTTACTTTGGGGAGCATGTATGTTTTTATATCCATGCTATTAGTTTATAGGCATTGATATTGCTTCATAATGTTGGAAGGAATCTGCACTCCGTTTTTTGGTTATTGTTACTTCATTATAATTGAATGAGAAATCTCTATTTCTCTTCACTACCCTTGAATCTATTTGATCGGTTAATTGATTCAAGTTTTCATGATTTTATATGCTTATTTCTCCAGCACGCCAGTTTACTTCGTATCAAGAGGAAAATAGAGTAGAAAATAATCAGGCTCTTGTTTATCCTGTTTTATAGTTGTCTAGAGCGTTTTCTCTTGCCAATGTTATTTCTCATCTACCATTTGAGTATTGTGTAATGTAATTGATTGTTATACCTTACGTGGATATGTTCTCATCCTTGTCATTTAAATTTGCAGCGAAACTCGTCCCTGTTGGATATGGTATTAAGAAATTGCAGATAATGCTCACAATTGTTGATGACCTTGTGTCTGTTGACAATCTCATTGAGGAATATCTGACAGTTGAACCCATAAACGAGCATGTCCAGAGCTGTGACATCGTGGCTTTCAACAAAATATGTAAGTTCCATTTTTATTTTGTTGCACTTGCACATAGCTATTTGAATTTTACGTTTAGATTGCGCAACCCGTTCTAATATCATCTTCAATCCGTTATTTTCTAAATCAACTATTGTTTCTGTTTGCAGAATTTTGAGCTTTTTGTCAGAACCAAAGATCGGTGTTTCTAAGATGTTGCTGGATCTGGGGAAGATGTTTTAGAGCGTCTGTTTTTCATTTCTACTTCTTCGTACTTGTTTTGTCTACCTTTGAAATACTCTTCTTTCCAGCTTTAATTGCGGTGTACTCCCTCTCAGTTTTGTTACTTAAACTGATTTGAAACGAGCTTCTGGAAATAATATTATTATAATTATCATGTTTCATTCTACTATAAATGAATTTTGCTAATTTAAATTGATAGCTTTTGGCATATACATATTAAGATACTAGGATTGAGAATGTTGCCCCAAGAGTTTGAACCATTATAGGTTGATCTAGTGGTAAGTAAGCATGAGTTTGATAGAGGGTTAGGAGATGGATTCAATCCATGTTGTAGAGTTAGATGAATTTTTTGATACTCAAATGTTGTAGAGTTAGACGGGTTTTCTAGCTAGTTGACGAAAAAATGAATGTCATAAAGAAAGAGCCAACTTTGTACATTAATATTTGAGTTTATTTGATACTAAAATGTTGTAGGGTTAGATGAATTTTCTAGGTAGTTGACGAAAAAATGATAAACAAAGAGTTAATTTTGTACATTGAAGCCTGATCCACAAATTGGTAGTATGGAAATGCACATGCTCAAAGTTTGTGTATTAAAAAAAATCATAGATCAAGATGTTGGAATTTAAACCGTCAATTACCGGAAGGGAGAAAAATTATAACAAAATACCCTTTTAACTTTATATTTAGCTTCATAAATATTCATATACTTTCAAAAAACCAATGTTAACTTTCAAACACTTAGCTTCATAAATATTCGTGCACTTTCAAAAAAATAATATTAACTCTCAACTTTCAACTTAGAACAATGTGATTATGTTCTATTGTTCTGCGATGATGATGTGGTTTTCTAACTTTTTGTTTTTGATCACTGTCACACCACATTCTATATGATTATAAAAACATATCATTTAATAATAATAAATTATATATATTACAAAATATGTTATATATTTATAGTTGAAAAGAAAAGAAATATTAATCCTATGGCTTCACACTTTTTTCGTCGTCTTTTCCACCAATCCACAGTCGACTAG

mRNA sequence

ATGATCGTCCTCAGGTATCAACCTTCAAAGGATGACGTTACAGTTTACGAAGCGCTCTCCAAACCGGTATCCAGTGAATATGTTAACGTGTCTAGGTGGTGTAATCACATCGAAGCACTCTTGAGAGTTTCCGCTGTTTTTGGGGAGGGTTCGGGTGTTAAGTTCGATGCAATTGCAACCCCACCTGCTGCAGATGCAAAGTTGGTGTACACCAAATTTCATCAGGGTGCCGATGACGACGACGACGATGACATGGACCTATTTGGTGAAGAGACCGAAGAGGAAAAGAAGGCTGCTGAAGAGCGTGCAGCTTCCATTAAGGCTTCTGCAAAGAAGAAAGAAAGTGGCAAATCATCAGTTCTGATGGATATCAAACCTTGGGATGACGAAACTGACATGAAGAAACTTGAAGAGGCTGTAAGAAGCGTTCAGATGGAAGGCTTACTTTGGGGAGCATCGAAACTCGTCCCTGTTGGATATGGTATTAAGAAATTGCAGATAATGCTCACAATTGTTGATGACCTTGTGTCTGTTGACAATCTCATTGAGGAATATCTGACAGTTGAACCCATAAACGAGCATGTCCAGAGCTGTGACATCGTGGCTTTCAACAAAATATTTGAAAAGAAAAGAAATATTAATCCTATGGCTTCACACTTTTTTCGTCGTCTTTTCCACCAATCCACAGTCGACTAG

Coding sequence (CDS)

ATGATCGTCCTCAGGTATCAACCTTCAAAGGATGACGTTACAGTTTACGAAGCGCTCTCCAAACCGGTATCCAGTGAATATGTTAACGTGTCTAGGTGGTGTAATCACATCGAAGCACTCTTGAGAGTTTCCGCTGTTTTTGGGGAGGGTTCGGGTGTTAAGTTCGATGCAATTGCAACCCCACCTGCTGCAGATGCAAAGTTGGTGTACACCAAATTTCATCAGGGTGCCGATGACGACGACGACGATGACATGGACCTATTTGGTGAAGAGACCGAAGAGGAAAAGAAGGCTGCTGAAGAGCGTGCAGCTTCCATTAAGGCTTCTGCAAAGAAGAAAGAAAGTGGCAAATCATCAGTTCTGATGGATATCAAACCTTGGGATGACGAAACTGACATGAAGAAACTTGAAGAGGCTGTAAGAAGCGTTCAGATGGAAGGCTTACTTTGGGGAGCATCGAAACTCGTCCCTGTTGGATATGGTATTAAGAAATTGCAGATAATGCTCACAATTGTTGATGACCTTGTGTCTGTTGACAATCTCATTGAGGAATATCTGACAGTTGAACCCATAAACGAGCATGTCCAGAGCTGTGACATCGTGGCTTTCAACAAAATATTTGAAAAGAAAAGAAATATTAATCCTATGGCTTCACACTTTTTTCGTCGTCTTTTCCACCAATCCACAGTCGACTAG

Protein sequence

MIVLRYQPSKDDVTVYEALSKPVSSEYVNVSRWCNHIEALLRVSAVFGEGSGVKFDAIATPPAADAKLVYTKFHQGADDDDDDDMDLFGEETEEEKKAAEERAASIKASAKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKIFEKKRNINPMASHFFRRLFHQSTVD

Homology

[Close]

BLAST of HG10018359.1 vs. NCBI nr
Match: XP_031743738.1 (elongation factor 1-delta isoform X1 [Cucumis sativus])

HSP 1 Score: 368.6 bits (945), Expect = 3.9e-98
Identity = 193/202 (95.54%), Postives = 198/202 (98.02%), Query Frame = 0


Query: 6   YQPSKDDVTVYEALSKPVSSEYVNVSRWCNHIEALLRVSAVFGEGSGVKFDAIATPPAAD 65
           YQPSKDDVTVYEALSKPVSSEYVNVSRW NHIEALLRVSAVFGEGSGVK DA+ATPPAAD
Sbjct: 72  YQPSKDDVTVYEALSKPVSSEYVNVSRWSNHIEALLRVSAVFGEGSGVKLDAVATPPAAD 131

Query: 66  AKLVYTKFHQGA-DDDDDDDMDLFGEETEEEKKAAEERAASIKASAKKKESGKSSVLMDI 125
           AKLVYT+F+Q A DDDDDDDMDLFGEETEEEKKAAEERAA++KASAKKKESGKSSVLMDI
Sbjct: 132 AKLVYTEFYQAADDDDDDDDMDLFGEETEEEKKAAEERAAAVKASAKKKESGKSSVLMDI 191

Query: 126 KPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEE 185
           KPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEE
Sbjct: 192 KPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEE 251

Query: 186 YLTVEPINEHVQSCDIVAFNKI 207
           YLTVEPINEHVQSCDIVAFNKI
Sbjct: 252 YLTVEPINEHVQSCDIVAFNKI 273

[Close]

BLAST of HG10018359.1 vs. NCBI nr
Match: XP_004138389.2 (elongation factor 1-delta isoform X2 [Cucumis sativus] >KAE8646580.1 hypothetical protein Csa_005110 [Cucumis sativus])

HSP 1 Score: 349.4 bits (895), Expect = 2.4e-92
Identity = 186/201 (92.54%), Postives = 189/201 (94.03%), Query Frame = 0


Query: 6   YQPSKDDVTVYEALSKPVSSEYVNVSRWCNHIEALLRVSAVFGEGSGVKFDAIATPPAAD 65
           YQPSKDDVTVYEALSKPVSSEYVNVSRW NHIEALLRVSAVFGEGSGVK DA+ATPPAAD
Sbjct: 72  YQPSKDDVTVYEALSKPVSSEYVNVSRWSNHIEALLRVSAVFGEGSGVKLDAVATPPAAD 131

Query: 66  AKLVYTKFHQGADDDDDDDMDLFGEETEEEKKAAEERAASIKASAKKKESGKSSVLMDIK 125
           AK          DDDDDDDMDLFGEETEEEKKAAEERAA++KASAKKKESGKSSVLMDIK
Sbjct: 132 AK-------AADDDDDDDDMDLFGEETEEEKKAAEERAAAVKASAKKKESGKSSVLMDIK 191

Query: 126 PWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEY 185
           PWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEY
Sbjct: 192 PWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEY 251

Query: 186 LTVEPINEHVQSCDIVAFNKI 207
           LTVEPINEHVQSCDIVAFNKI
Sbjct: 252 LTVEPINEHVQSCDIVAFNKI 265

[Close]

BLAST of HG10018359.1 vs. NCBI nr
Match: XP_038884883.1 (elongation factor 1-delta-like [Benincasa hispida])

HSP 1 Score: 348.2 bits (892), Expect = 5.4e-92
Identity = 186/201 (92.54%), Postives = 189/201 (94.03%), Query Frame = 0


Query: 6   YQPSKDDVTVYEALSKPVSSEYVNVSRWCNHIEALLRVSAVFGEGSGVKFDAIATPPAAD 65
           YQPSKDDVTVYEALSKPVSSEYVNVSRW NHIEALLRVSAVFGEGSGVK DA+ATPPAAD
Sbjct: 30  YQPSKDDVTVYEALSKPVSSEYVNVSRWFNHIEALLRVSAVFGEGSGVKLDAVATPPAAD 89

Query: 66  AKLVYTKFHQGADDDDDDDMDLFGEETEEEKKAAEERAASIKASAKKKESGKSSVLMDIK 125
           AK         ADDDDDDDMDLFGEETEEEKKAAEERAA+IKASAKKKESGKSSVLMDIK
Sbjct: 90  AK--------AADDDDDDDMDLFGEETEEEKKAAEERAAAIKASAKKKESGKSSVLMDIK 149

Query: 126 PWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEY 185
           PWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEE+
Sbjct: 150 PWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEH 209

Query: 186 LTVEPINEHVQSCDIVAFNKI 207
           LT EPINEHVQSCDIVAFNKI
Sbjct: 210 LTAEPINEHVQSCDIVAFNKI 222

[Close]

BLAST of HG10018359.1 vs. NCBI nr
Match: XP_008456798.1 (PREDICTED: elongation factor 1-delta 2-like isoform X2 [Cucumis melo])

HSP 1 Score: 339.0 bits (868), Expect = 3.3e-89
Identity = 181/201 (90.05%), Postives = 185/201 (92.04%), Query Frame = 0


Query: 6   YQPSKDDVTVYEALSKPVSSEYVNVSRWCNHIEALLRVSAVFGEGSGVKFDAIATPPAAD 65
           YQPSKDDVTVYEALSKPV SEYVNVSRW NHIEALLRVSAVFGEGSGVK DA+ATPPAAD
Sbjct: 30  YQPSKDDVTVYEALSKPVYSEYVNVSRWSNHIEALLRVSAVFGEGSGVKLDAVATPPAAD 89

Query: 66  AKLVYTKFHQGADDDDDDDMDLFGEETEEEKKAAEERAASIKASAKKKESGKSSVLMDIK 125
           AK+            DDDDMDLFGEETEEEKKAAEERAASIKAS+KKKESGKSSVLMDIK
Sbjct: 90  AKVA-----------DDDDMDLFGEETEEEKKAAEERAASIKASSKKKESGKSSVLMDIK 149

Query: 126 PWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEY 185
           PWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEE+
Sbjct: 150 PWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEH 209

Query: 186 LTVEPINEHVQSCDIVAFNKI 207
           LT EPINEHVQSCDIVAFNKI
Sbjct: 210 LTAEPINEHVQSCDIVAFNKI 219

[Close]

BLAST of HG10018359.1 vs. NCBI nr
Match: KAA0051951.1 (elongation factor 1-delta 2-like isoform X2 [Cucumis melo var. makuwa] >TYK04600.1 elongation factor 1-delta 2-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 339.0 bits (868), Expect = 3.3e-89
Identity = 181/201 (90.05%), Postives = 185/201 (92.04%), Query Frame = 0


Query: 6   YQPSKDDVTVYEALSKPVSSEYVNVSRWCNHIEALLRVSAVFGEGSGVKFDAIATPPAAD 65
           YQPSKDDVTVYEALSKPV SEYVNVSRW NHIEALLRVSAVFGEGSGVK DA+ATPPAAD
Sbjct: 30  YQPSKDDVTVYEALSKPVYSEYVNVSRWSNHIEALLRVSAVFGEGSGVKLDAVATPPAAD 89

Query: 66  AKLVYTKFHQGADDDDDDDMDLFGEETEEEKKAAEERAASIKASAKKKESGKSSVLMDIK 125
           AK+            DDDDMDLFGEETEEEKKAAEERAASIKAS+KKKESGKSSVLMDIK
Sbjct: 90  AKVA-----------DDDDMDLFGEETEEEKKAAEERAASIKASSKKKESGKSSVLMDIK 149

Query: 126 PWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEY 185
           PWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEE+
Sbjct: 150 PWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEH 209

Query: 186 LTVEPINEHVQSCDIVAFNKI 207
           LT EPINEHVQSCDIVAFNKI
Sbjct: 210 LTAEPINEHVQSCDIVAFNKI 219

[Close]

BLAST of HG10018359.1 vs. ExPASy Swiss-Prot
Match: Q9SI20 (Elongation factor 1-delta 2 OS=Arabidopsis thaliana OX=3702 GN=At2g18110 PE=1 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 4.2e-79
Identity = 159/209 (76.08%), Postives = 177/209 (84.69%), Query Frame = 0


Query: 6   YQPSKDDVTVYEALSKPVSSEYVNVSRWCNHIEALLRVSAVFGEGSGV--------KFDA 65
           YQ SKDD+TV+ ALSKP +SE+VNVSRW NHI+ALLR+S V  EGSGV          +A
Sbjct: 29  YQASKDDITVFTALSKPPTSEFVNVSRWFNHIDALLRISGVSAEGSGVIVEGSSPITEEA 88

Query: 66  IATPPAADAKLVYTKFHQGADDDDDDDMDLFGEETEEEKKAAEERAASIKASAKKKESGK 125
           +ATPPAAD+K         A+++DDDD+DLFGEETEEEKKAAEERAAS+KAS KKKESGK
Sbjct: 89  VATPPAADSK------DTAAEEEDDDDVDLFGEETEEEKKAAEERAASVKASTKKKESGK 148

Query: 126 SSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVS 185
           SSVLMDIKPWDDETDMKKLEEAVRS+QMEGL WGASKLVPVGYGIKKL IM TIVDDLVS
Sbjct: 149 SSVLMDIKPWDDETDMKKLEEAVRSIQMEGLFWGASKLVPVGYGIKKLHIMCTIVDDLVS 208

Query: 186 VDNLIEEYLTVEPINEHVQSCDIVAFNKI 207
           +D +IEE LTVEPINE+VQSCDIVAFNKI
Sbjct: 209 IDTMIEEQLTVEPINEYVQSCDIVAFNKI 231

[Close]

BLAST of HG10018359.1 vs. ExPASy Swiss-Prot
Match: P48006 (Elongation factor 1-delta 1 OS=Arabidopsis thaliana OX=3702 GN=At1g30230 PE=1 SV=2)

HSP 1 Score: 293.1 bits (749), Expect = 2.7e-78
Identity = 156/209 (74.64%), Postives = 177/209 (84.69%), Query Frame = 0


Query: 6   YQPSKDDVTVYEALSKPVSSEYVNVSRWCNHIEALLRVSAVFGEGSGV--------KFDA 65
           YQ SKDD+TV+ AL+KP +S+YVN SRW NHI+ALLR+S V  EGSGV          +A
Sbjct: 29  YQASKDDITVFAALAKPPTSQYVNASRWYNHIDALLRISGVSAEGSGVIVEGSAPITEEA 88

Query: 66  IATPPAADAKLVYTKFHQGADDDDDDDMDLFGEETEEEKKAAEERAASIKASAKKKESGK 125
           +ATPPAAD+K         AD++DDDD+DLFGEETEEEKKAAEERAAS+KAS KKKESGK
Sbjct: 89  VATPPAADSK------DAAADEEDDDDVDLFGEETEEEKKAAEERAASVKASTKKKESGK 148

Query: 126 SSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVS 185
           SSVL+DIKPWDDETDMKKLEEAV+S+QMEGL WGASKLVPVGYGIKKLQI+ TIVDDLVS
Sbjct: 149 SSVLIDIKPWDDETDMKKLEEAVKSIQMEGLFWGASKLVPVGYGIKKLQILCTIVDDLVS 208

Query: 186 VDNLIEEYLTVEPINEHVQSCDIVAFNKI 207
           +D +IEE LTVEPINE+VQSCDIVAFNKI
Sbjct: 209 IDTMIEEQLTVEPINEYVQSCDIVAFNKI 231

[Close]

BLAST of HG10018359.1 vs. ExPASy Swiss-Prot
Match: P93447 (Elongation factor 1-delta OS=Pimpinella brachycarpa OX=45043 PE=2 SV=3)

HSP 1 Score: 288.1 bits (736), Expect = 8.7e-77
Identity = 150/203 (73.89%), Postives = 174/203 (85.71%), Query Frame = 0


Query: 6   YQPSKDDVTVYEALSKPVSSEYVNVSRWCNHIEALLRVSAVFGEGSGVKFD--AIATPPA 65
           YQ SKDD+ V+ AL+KP SS+YVNVSRW NH+EALLR+S V  EG GV  +  ++ATPP 
Sbjct: 30  YQASKDDLAVHAALAKPPSSKYVNVSRWYNHVEALLRISGVSAEGCGVTVEGSSVATPPV 89

Query: 66  ADAKLVYTKFHQGADDDDDDDMDLFGEETEEEKKAAEERAASIKASAKKKESGKSSVLMD 125
           AD K         A+DDDDDD+DLFGEETEEEKKA+EERAA++KAS KKKESGKSSVL+D
Sbjct: 90  ADTKA------SAAEDDDDDDVDLFGEETEEEKKASEERAAAVKASGKKKESGKSSVLLD 149

Query: 126 IKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIE 185
           +KPWDDETDM KLEEAVRS++M+GLLWGASKLV VGYGIKKLQIMLTIVDDLVSVD+L+E
Sbjct: 150 VKPWDDETDMTKLEEAVRSIKMDGLLWGASKLVAVGYGIKKLQIMLTIVDDLVSVDDLVE 209

Query: 186 EYLTVEPINEHVQSCDIVAFNKI 207
           +YLT EP NE++QSCDIVAFNKI
Sbjct: 210 DYLTAEPANEYIQSCDIVAFNKI 226

[Close]

BLAST of HG10018359.1 vs. ExPASy Swiss-Prot
Match: O81918 (Elongation factor 1-delta OS=Beta vulgaris OX=161934 PE=2 SV=3)

HSP 1 Score: 280.0 bits (715), Expect = 2.4e-74
Identity = 155/208 (74.52%), Postives = 171/208 (82.21%), Query Frame = 0


Query: 6   YQPSKDDVTVYEALSKPVSSEYVNVSRWCNHIEALLRVSAVFGEGSGVKFDA------IA 65
           YQ SKDD+TV+ A+ K   + YVNVSRW  HI+ALLR+S V GEGSGV  +       +A
Sbjct: 30  YQASKDDLTVFSAVPKASLASYVNVSRWYKHIDALLRISGVSGEGSGVTVEGNAPASDVA 89

Query: 66  TPPAADAKLVYTKFHQGADDDDDDDMDLFGEETEEEKKAAEERAASIKAS-AKKKESGKS 125
           TPPAAD+K         ADDDDDDD+DLFGEETEEEKKAAEERAA+  A  AKKKESGKS
Sbjct: 90  TPPAADSKA------SAADDDDDDDVDLFGEETEEEKKAAEERAAAAAAKPAKKKESGKS 149

Query: 126 SVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSV 185
           SVL+D+KPWDDETDMKKLEEAVRSVQ EGL  GASKLVPVGYGIKKL IM+TIVDDLVSV
Sbjct: 150 SVLLDVKPWDDETDMKKLEEAVRSVQQEGLTLGASKLVPVGYGIKKLTIMMTIVDDLVSV 209

Query: 186 DNLIEEYLTVEPINEHVQSCDIVAFNKI 207
           DNLIE+YLTVEPINE+VQSCDIVAFNKI
Sbjct: 210 DNLIEDYLTVEPINEYVQSCDIVAFNKI 231

[Close]

BLAST of HG10018359.1 vs. ExPASy Swiss-Prot
Match: Q40680 (Elongation factor 1-delta 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0614500 PE=2 SV=3)

HSP 1 Score: 275.0 bits (702), Expect = 7.7e-73
Identity = 144/201 (71.64%), Postives = 165/201 (82.09%), Query Frame = 0


Query: 6   YQPSKDDVTVYEALSKPVSSEYVNVSRWCNHIEALLRVSAVFGEGSGVKFDAIATPPAAD 65
           YQ S DD+ VY A S   SS Y NV+RW  HI+ALLR+S V  +G GVK ++ A P A+ 
Sbjct: 30  YQASNDDLAVYSAFSTAPSSSYTNVARWFTHIDALLRLSGVTADGQGVKVESTAVPSAST 89

Query: 66  AKLVYTKFHQGADDDDDDDMDLFGEETEEEKKAAEERAASIKASAKKKESGKSSVLMDIK 125
             +   K    ADDDDDDD+DLFGEETEEEKKAAEERAA++KAS KKKESGKSSVL+D+K
Sbjct: 90  PDVADAK-APAADDDDDDDVDLFGEETEEEKKAAEERAAAVKASGKKKESGKSSVLLDVK 149

Query: 126 PWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEY 185
           PWDDETDM KLEEAVR+V+MEGLLWGASKLVPVGYGIKKLQIM+TIVDDLVSVD+LIE+Y
Sbjct: 150 PWDDETDMTKLEEAVRNVKMEGLLWGASKLVPVGYGIKKLQIMMTIVDDLVSVDSLIEDY 209

Query: 186 LTVEPINEHVQSCDIVAFNKI 207
              EP NE++QSCDIVAFNKI
Sbjct: 210 FYTEPANEYIQSCDIVAFNKI 229

[Close]

BLAST of HG10018359.1 vs. ExPASy TrEMBL
Match: A0A0A0KDI4 (EF1_GNE domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G014660 PE=3 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 1.2e-92
Identity = 186/201 (92.54%), Postives = 189/201 (94.03%), Query Frame = 0


Query: 6   YQPSKDDVTVYEALSKPVSSEYVNVSRWCNHIEALLRVSAVFGEGSGVKFDAIATPPAAD 65
           YQPSKDDVTVYEALSKPVSSEYVNVSRW NHIEALLRVSAVFGEGSGVK DA+ATPPAAD
Sbjct: 72  YQPSKDDVTVYEALSKPVSSEYVNVSRWSNHIEALLRVSAVFGEGSGVKLDAVATPPAAD 131

Query: 66  AKLVYTKFHQGADDDDDDDMDLFGEETEEEKKAAEERAASIKASAKKKESGKSSVLMDIK 125
           AK          DDDDDDDMDLFGEETEEEKKAAEERAA++KASAKKKESGKSSVLMDIK
Sbjct: 132 AK-------AADDDDDDDDMDLFGEETEEEKKAAEERAAAVKASAKKKESGKSSVLMDIK 191

Query: 126 PWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEY 185
           PWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEY
Sbjct: 192 PWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEY 251

Query: 186 LTVEPINEHVQSCDIVAFNKI 207
           LTVEPINEHVQSCDIVAFNKI
Sbjct: 252 LTVEPINEHVQSCDIVAFNKI 265

[Close]

BLAST of HG10018359.1 vs. ExPASy TrEMBL
Match: A0A1S3C5C6 (elongation factor 1-delta 2-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496637 PE=3 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 1.6e-89
Identity = 181/201 (90.05%), Postives = 185/201 (92.04%), Query Frame = 0


Query: 6   YQPSKDDVTVYEALSKPVSSEYVNVSRWCNHIEALLRVSAVFGEGSGVKFDAIATPPAAD 65
           YQPSKDDVTVYEALSKPV SEYVNVSRW NHIEALLRVSAVFGEGSGVK DA+ATPPAAD
Sbjct: 30  YQPSKDDVTVYEALSKPVYSEYVNVSRWSNHIEALLRVSAVFGEGSGVKLDAVATPPAAD 89

Query: 66  AKLVYTKFHQGADDDDDDDMDLFGEETEEEKKAAEERAASIKASAKKKESGKSSVLMDIK 125
           AK+            DDDDMDLFGEETEEEKKAAEERAASIKAS+KKKESGKSSVLMDIK
Sbjct: 90  AKVA-----------DDDDMDLFGEETEEEKKAAEERAASIKASSKKKESGKSSVLMDIK 149

Query: 126 PWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEY 185
           PWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEE+
Sbjct: 150 PWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEH 209

Query: 186 LTVEPINEHVQSCDIVAFNKI 207
           LT EPINEHVQSCDIVAFNKI
Sbjct: 210 LTAEPINEHVQSCDIVAFNKI 219

[Close]

BLAST of HG10018359.1 vs. ExPASy TrEMBL
Match: A0A5A7UEH8 (Elongation factor 1-delta 2-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G002380 PE=3 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 1.6e-89
Identity = 181/201 (90.05%), Postives = 185/201 (92.04%), Query Frame = 0


Query: 6   YQPSKDDVTVYEALSKPVSSEYVNVSRWCNHIEALLRVSAVFGEGSGVKFDAIATPPAAD 65
           YQPSKDDVTVYEALSKPV SEYVNVSRW NHIEALLRVSAVFGEGSGVK DA+ATPPAAD
Sbjct: 30  YQPSKDDVTVYEALSKPVYSEYVNVSRWSNHIEALLRVSAVFGEGSGVKLDAVATPPAAD 89

Query: 66  AKLVYTKFHQGADDDDDDDMDLFGEETEEEKKAAEERAASIKASAKKKESGKSSVLMDIK 125
           AK+            DDDDMDLFGEETEEEKKAAEERAASIKAS+KKKESGKSSVLMDIK
Sbjct: 90  AKVA-----------DDDDMDLFGEETEEEKKAAEERAASIKASSKKKESGKSSVLMDIK 149

Query: 126 PWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEY 185
           PWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEE+
Sbjct: 150 PWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEH 209

Query: 186 LTVEPINEHVQSCDIVAFNKI 207
           LT EPINEHVQSCDIVAFNKI
Sbjct: 210 LTAEPINEHVQSCDIVAFNKI 219

[Close]

BLAST of HG10018359.1 vs. ExPASy TrEMBL
Match: A0A1S3C464 (elongation factor 1-delta 2-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496637 PE=3 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 1.6e-89
Identity = 181/201 (90.05%), Postives = 185/201 (92.04%), Query Frame = 0


Query: 6   YQPSKDDVTVYEALSKPVSSEYVNVSRWCNHIEALLRVSAVFGEGSGVKFDAIATPPAAD 65
           YQPSKDDVTVYEALSKPV SEYVNVSRW NHIEALLRVSAVFGEGSGVK DA+ATPPAAD
Sbjct: 30  YQPSKDDVTVYEALSKPVYSEYVNVSRWSNHIEALLRVSAVFGEGSGVKLDAVATPPAAD 89

Query: 66  AKLVYTKFHQGADDDDDDDMDLFGEETEEEKKAAEERAASIKASAKKKESGKSSVLMDIK 125
           AK+            DDDDMDLFGEETEEEKKAAEERAASIKAS+KKKESGKSSVLMDIK
Sbjct: 90  AKVA-----------DDDDMDLFGEETEEEKKAAEERAASIKASSKKKESGKSSVLMDIK 149

Query: 126 PWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEY 185
           PWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEE+
Sbjct: 150 PWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEH 209

Query: 186 LTVEPINEHVQSCDIVAFNKI 207
           LT EPINEHVQSCDIVAFNKI
Sbjct: 210 LTAEPINEHVQSCDIVAFNKI 219

[Close]

BLAST of HG10018359.1 vs. ExPASy TrEMBL
Match: A0A6J1C786 (elongation factor 1-delta-like OS=Momordica charantia OX=3673 GN=LOC111009043 PE=3 SV=1)

HSP 1 Score: 334.7 bits (857), Expect = 3.0e-88
Identity = 180/204 (88.24%), Postives = 187/204 (91.67%), Query Frame = 0


Query: 6   YQPSKDDVTVYEALSKPVSSEYVNVSRWCNHIEALLRVSAVFGEGSGVKF---DAIATPP 65
           YQ SKDD+ VYEALSKPVSSEYVNVSRW NHIEALLR+SAVFGEGSGVKF   +AIATPP
Sbjct: 30  YQASKDDIAVYEALSKPVSSEYVNVSRWINHIEALLRISAVFGEGSGVKFQSAEAIATPP 89

Query: 66  AADAKLVYTKFHQGADDDDDDDMDLFGEETEEEKKAAEERAASIKASAKKKESGKSSVLM 125
           AADAK         ADDDDDDDMDLFGEETEEEKKAAEERAAS+KAS KKKESGKSSVLM
Sbjct: 90  AADAKA-----SAAADDDDDDDMDLFGEETEEEKKAAEERAASVKASGKKKESGKSSVLM 149

Query: 126 DIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLI 185
           DIKPWDDETDMKKLEEAVR VQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLI
Sbjct: 150 DIKPWDDETDMKKLEEAVRGVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLI 209

Query: 186 EEYLTVEPINEHVQSCDIVAFNKI 207
           EE+LTVEPIN++VQSCDIVAFNKI
Sbjct: 210 EEHLTVEPINDYVQSCDIVAFNKI 228

[Close]

BLAST of HG10018359.1 vs. TAIR 10
Match: AT2G18110.1 (Translation elongation factor EF1B/ribosomal protein S6 family protein )

HSP 1 Score: 295.8 bits (756), Expect = 3.0e-80
Identity = 159/209 (76.08%), Postives = 177/209 (84.69%), Query Frame = 0


Query: 6   YQPSKDDVTVYEALSKPVSSEYVNVSRWCNHIEALLRVSAVFGEGSGV--------KFDA 65
           YQ SKDD+TV+ ALSKP +SE+VNVSRW NHI+ALLR+S V  EGSGV          +A
Sbjct: 29  YQASKDDITVFTALSKPPTSEFVNVSRWFNHIDALLRISGVSAEGSGVIVEGSSPITEEA 88

Query: 66  IATPPAADAKLVYTKFHQGADDDDDDDMDLFGEETEEEKKAAEERAASIKASAKKKESGK 125
           +ATPPAAD+K         A+++DDDD+DLFGEETEEEKKAAEERAAS+KAS KKKESGK
Sbjct: 89  VATPPAADSK------DTAAEEEDDDDVDLFGEETEEEKKAAEERAASVKASTKKKESGK 148

Query: 126 SSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVS 185
           SSVLMDIKPWDDETDMKKLEEAVRS+QMEGL WGASKLVPVGYGIKKL IM TIVDDLVS
Sbjct: 149 SSVLMDIKPWDDETDMKKLEEAVRSIQMEGLFWGASKLVPVGYGIKKLHIMCTIVDDLVS 208

Query: 186 VDNLIEEYLTVEPINEHVQSCDIVAFNKI 207
           +D +IEE LTVEPINE+VQSCDIVAFNKI
Sbjct: 209 IDTMIEEQLTVEPINEYVQSCDIVAFNKI 231

[Close]

BLAST of HG10018359.1 vs. TAIR 10
Match: AT1G30230.2 (Glutathione S-transferase, C-terminal-like;Translation elongation factor EF1B/ribosomal protein S6 )

HSP 1 Score: 293.9 bits (751), Expect = 1.1e-79
Identity = 157/222 (70.72%), Postives = 182/222 (81.98%), Query Frame = 0


Query: 6   YQPSKDDVTVYEALSKPVSSEYVNVSRWCNHIEALLRVSAVFGEGSGV--------KFDA 65
           YQ SKDD+TV+ AL+KP +S+YVN SRW NHI+ALLR+S V  EGSGV          +A
Sbjct: 29  YQASKDDITVFAALAKPPTSQYVNASRWYNHIDALLRISGVSAEGSGVIVEGSAPITEEA 88

Query: 66  IATPPAADAKLVYTKFHQGADDDDDDDMDLFGEETEEEKKAAEERAASIKASAKKKESGK 125
           +ATPPAAD+K         AD++DDDD+DLFGEETEEEKKAAEERAAS+KAS KKKESGK
Sbjct: 89  VATPPAADSK------DAAADEEDDDDVDLFGEETEEEKKAAEERAASVKASTKKKESGK 148

Query: 126 SSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVS 185
           SSVL+DIKPWDDETDMKKLEEAV+S+QMEGL WGASKLVPVGYGIKKLQI+ TIVDDLVS
Sbjct: 149 SSVLIDIKPWDDETDMKKLEEAVKSIQMEGLFWGASKLVPVGYGIKKLQILCTIVDDLVS 208

Query: 186 VDNLIEEYLTVEPINEHVQSCDIVAFNKIFEKKRNINPMASH 220
           +D +IEE LTVEPINE+VQSCDIVAFNKI + ++    +  H
Sbjct: 209 IDTMIEEQLTVEPINEYVQSCDIVAFNKICKMEKASRNVCVH 244

[Close]

BLAST of HG10018359.1 vs. TAIR 10
Match: AT1G30230.1 (Glutathione S-transferase, C-terminal-like;Translation elongation factor EF1B/ribosomal protein S6 )

HSP 1 Score: 293.1 bits (749), Expect = 1.9e-79
Identity = 156/209 (74.64%), Postives = 177/209 (84.69%), Query Frame = 0


Query: 6   YQPSKDDVTVYEALSKPVSSEYVNVSRWCNHIEALLRVSAVFGEGSGV--------KFDA 65
           YQ SKDD+TV+ AL+KP +S+YVN SRW NHI+ALLR+S V  EGSGV          +A
Sbjct: 29  YQASKDDITVFAALAKPPTSQYVNASRWYNHIDALLRISGVSAEGSGVIVEGSAPITEEA 88

Query: 66  IATPPAADAKLVYTKFHQGADDDDDDDMDLFGEETEEEKKAAEERAASIKASAKKKESGK 125
           +ATPPAAD+K         AD++DDDD+DLFGEETEEEKKAAEERAAS+KAS KKKESGK
Sbjct: 89  VATPPAADSK------DAAADEEDDDDVDLFGEETEEEKKAAEERAASVKASTKKKESGK 148

Query: 126 SSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVS 185
           SSVL+DIKPWDDETDMKKLEEAV+S+QMEGL WGASKLVPVGYGIKKLQI+ TIVDDLVS
Sbjct: 149 SSVLIDIKPWDDETDMKKLEEAVKSIQMEGLFWGASKLVPVGYGIKKLQILCTIVDDLVS 208

Query: 186 VDNLIEEYLTVEPINEHVQSCDIVAFNKI 207
           +D +IEE LTVEPINE+VQSCDIVAFNKI
Sbjct: 209 IDTMIEEQLTVEPINEYVQSCDIVAFNKI 231

[Close]

BLAST of HG10018359.1 vs. TAIR 10
Match: AT5G19510.1 (Translation elongation factor EF1B/ribosomal protein S6 family protein )

HSP 1 Score: 219.9 bits (559), Expect = 2.1e-57
Identity = 128/201 (63.68%), Postives = 147/201 (73.13%), Query Frame = 0


Query: 7   QPSKDDVTVYEALSKPVSSEYVNVSRWCNHIEALLRVSAVFGEGSGVKF-DAIATPPAAD 66
           Q S DDV VY A+    S  + N S+W   + + L  S   G+  GV+F  + A  PA +
Sbjct: 31  QLSVDDVKVYAAVPVKPSDAFPNASKWYESVASQLAKSFP-GKAVGVQFGGSAAAAPAVE 90

Query: 67  AKLVYTKFHQGADDDDDDDMDLFGEETEEEKKAAEERAASIKASAKKKESGKSSVLMDIK 126
           A+         A  DDDDDMDLFG+ETEEEKKAAEER A+ K + K KESGKSSVLMD+K
Sbjct: 91  AEA------PAAAADDDDDMDLFGDETEEEKKAAEEREAAKKDTKKPKESGKSSVLMDVK 150

Query: 127 PWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEY 186
           PWDDETDMKKLEEAVR V+M GL WGASKLVPVGYGIKKL IM TIVDDLVS DNLIE++
Sbjct: 151 PWDDETDMKKLEEAVRGVEMPGLFWGASKLVPVGYGIKKLTIMFTIVDDLVSPDNLIEDF 210

Query: 187 LTVEPINEHVQSCDIVAFNKI 207
           LT EP NE++QSCDIVAFNKI
Sbjct: 211 LTSEPNNEYIQSCDIVAFNKI 224

[Close]

BLAST of HG10018359.1 vs. TAIR 10
Match: AT5G12110.1 (Glutathione S-transferase, C-terminal-like;Translation elongation factor EF1B/ribosomal protein S6 )

HSP 1 Score: 212.6 bits (540), Expect = 3.3e-55
Identity = 122/200 (61.00%), Postives = 147/200 (73.50%), Query Frame = 0


Query: 7   QPSKDDVTVYEALSKPVSSEYVNVSRWCNHIEALLRVSAVFGEGSGVKFDAIATPPAADA 66
           Q S DDV VY A+ +     + N S+W + + + L  S   G+  GV+      PP ++A
Sbjct: 31  QLSVDDVKVYAAVLENPGDGFPNASKWYDSVASHLAKSFP-GKADGVRVGGGVAPP-SEA 90

Query: 67  KLVYTKFHQGADDDDDDDMDLFGEETEEEKKAAEERAASIKASAKKKESGKSSVLMDIKP 126
                +     D DDDDD+DLF +ETE+EKKAAEER A+ K + K KESGKSSVL+++KP
Sbjct: 91  HPHTEEPAADGDGDDDDDIDLFADETEDEKKAAEEREAAKKDTKKTKESGKSSVLLEVKP 150

Query: 127 WDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEYL 186
           WDDETDMKKLEEAVRSVQM GL WGASKLVPVGYGIKKL IM+TIVDDLVSVDNLIE++L
Sbjct: 151 WDDETDMKKLEEAVRSVQMPGLTWGASKLVPVGYGIKKLTIMMTIVDDLVSVDNLIEDHL 210

Query: 187 TVEPINEHVQSCDIVAFNKI 207
           T EP NE++QS DIVAFNKI
Sbjct: 211 TSEPNNEYIQSVDIVAFNKI 228

The following BLAST results are available for this feature:

BLAST of HG10018359.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031743738.1	3.9e-98	95.54	elongation factor 1-delta isoform X1 [Cucumis sativus]	[more]
XP_004138389.2	2.4e-92	92.54	elongation factor 1-delta isoform X2 [Cucumis sativus] >KAE8646580.1 hypothetica...	[more]
XP_038884883.1	5.4e-92	92.54	elongation factor 1-delta-like [Benincasa hispida]	[more]
XP_008456798.1	3.3e-89	90.05	PREDICTED: elongation factor 1-delta 2-like isoform X2 [Cucumis melo]	[more]
KAA0051951.1	3.3e-89	90.05	elongation factor 1-delta 2-like isoform X2 [Cucumis melo var. makuwa] >TYK04600...	[more]

BLAST of HG10018359.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SI20	4.2e-79	76.08	Elongation factor 1-delta 2 OS=Arabidopsis thaliana OX=3702 GN=At2g18110 PE=1 SV...	[more]
P48006	2.7e-78	74.64	Elongation factor 1-delta 1 OS=Arabidopsis thaliana OX=3702 GN=At1g30230 PE=1 SV...	[more]
P93447	8.7e-77	73.89	Elongation factor 1-delta OS=Pimpinella brachycarpa OX=45043 PE=2 SV=3	[more]
O81918	2.4e-74	74.52	Elongation factor 1-delta OS=Beta vulgaris OX=161934 PE=2 SV=3	[more]
Q40680	7.7e-73	71.64	Elongation factor 1-delta 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g061...	[more]

BLAST of HG10018359.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KDI4	1.2e-92	92.54	EF1_GNE domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G014660 PE=...	[more]
A0A1S3C5C6	1.6e-89	90.05	elongation factor 1-delta 2-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496...	[more]
A0A5A7UEH8	1.6e-89	90.05	Elongation factor 1-delta 2-like isoform X2 OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3C464	1.6e-89	90.05	elongation factor 1-delta 2-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496...	[more]
A0A6J1C786	3.0e-88	88.24	elongation factor 1-delta-like OS=Momordica charantia OX=3673 GN=LOC111009043 PE...	[more]

BLAST of HG10018359.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G18110.1	3.0e-80	76.08	Translation elongation factor EF1B/ribosomal protein S6 family protein	[more]
AT1G30230.2	1.1e-79	70.72	Glutathione S-transferase, C-terminal-like;Translation elongation factor EF1B/r...	[more]
AT1G30230.1	1.9e-79	74.64	Glutathione S-transferase, C-terminal-like;Translation elongation factor EF1B/r...	[more]
AT5G19510.1	2.1e-57	63.68	Translation elongation factor EF1B/ribosomal protein S6 family protein	[more]
AT5G12110.1	3.3e-55	61.00	Glutathione S-transferase, C-terminal-like;Translation elongation factor EF1B/r...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 89..109
None	No IPR available	PANTHER	PTHR11595	EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER	coord: 4..208
None	No IPR available	PANTHER	PTHR11595:SF73	ELONGATION FACTOR 1-DELTA 1-RELATED	coord: 4..208
IPR014038	Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange domain	SMART	SM00888	EF1_GNE_2	coord: 117..206 e-value: 7.4E-37 score: 138.4
IPR014038	Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange domain	PFAM	PF00736	EF1_GNE	coord: 119..206 e-value: 9.1E-34 score: 115.5
IPR014038	Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange domain	CDD	cd00292	EF1B	coord: 115..206 e-value: 5.95989E-40 score: 130.794
IPR014717	Translation elongation factor EF1B/ribosomal protein S6	GENE3D	3.30.70.60		coord: 110..206 e-value: 1.1E-44 score: 152.3
IPR001326	Translation elongation factor EF1B, beta/delta chains, conserved site	PROSITE	PS00825	EF1BD_2	coord: 195..206
IPR001326	Translation elongation factor EF1B, beta/delta chains, conserved site	PROSITE	PS00824	EF1BD_1	coord: 81..89
IPR036219	Translation elongation factor eEF-1beta-like superfamily	SUPERFAMILY	54984	eEF-1beta-like	coord: 114..206

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
HG10018359	HG10018359	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
HG10018359.1-cds	HG10018359.1-cds-Chr04:3451608..3451738	CDS
HG10018359.1-cds	HG10018359.1-cds-Chr04:3451852..3451921	CDS
HG10018359.1-cds	HG10018359.1-cds-Chr04:3452039..3452180	CDS
HG10018359.1-cds	HG10018359.1-cds-Chr04:3452263..3452376	CDS
HG10018359.1-cds	HG10018359.1-cds-Chr04:3452773..3452934	CDS
HG10018359.1-cds	HG10018359.1-cds-Chr04:3454096..3454172	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
HG10018359.1	HG10018359.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006414	translational elongation
biological_process	GO:0050790	regulation of catalytic activity
cellular_component	GO:0005853	eukaryotic translation elongation factor 1 complex
cellular_component	GO:0005829	cytosol
molecular_function	GO:0003746	translation elongation factor activity
molecular_function	GO:0005085	guanyl-nucleotide exchange factor activity