HG10018359 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10018359
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionelongation factor 1-delta-like
LocationChr04: 3451608 .. 3454172 (+)
RNA-Seq ExpressionHG10018359
SyntenyHG10018359
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCGTCCTCAGGTATCAACCTTCAAAGGATGACGTTACAGTTTACGAAGCGCTCTCCAAACCGGTATCCAGTGAATATGTTAACGTGTCTAGGTGGTGTAATCACATCGAAGCACTCTTGAGAGTTTCGTAAGTCATCGAAATTCTTAATTTTTTGGGTTGGTTTTATAGAATTCTTATTTATGCTTATGGTTTCATTCACTATTTGTTCTGTAACCACTGGGTTTGATAATGGTTTTTAGCGCTGTTTTTGGGGAGGGTTCGGGTGTTAAGTTCGATGCAATTGCAACCCCACCTGCTGCAGATGCAAAGGTGAAAACTTTACCTAGTGTTTCCTTTATATGTTATGTGTGCTGAGACGTGACATTGTCTCTTGGTGCATACTCCATGCTTTTGTTAGCCTTGCTTTATTTTTTCATCTAATTATAGTTGGTGTACACCAAATTTCATCAGGGTGCCGATGACGACGACGACGATGACATGGACCTATTTGGTGAAGAGACCGAAGAGGAAAAGAAGGCTGCTGAAGAGCGTGCAGCTTCCATTAAGGCTTCTGCAAAGAAGAAAGAAAGTAAGTTTCATTTACCATCAATCTTGGACTCGTTTTATATTGTCCAGTGATTTTAATGATGTCTATTTGGTGTTTGTTTTAGGTGGCAAATCATCAGTTCTGATGGATATCAAACCTTGGGATGACGAAACTGACATGAAGAAACTTGAAGAGGCTGTAAGAAGCGTTCAGATGGAAGGCTTACTTTGGGGAGCATGTATGTTTTTATATCCATGCTATTAGTTTATAGGCATTGATATTGCTTCATAATGTTGGAAGGAATCTGCACTCCGTTTTTTGGTTATTGTTACTTCATTATAATTGAATGAGAAATCTCTATTTCTCTTCACTACCCTTGAATCTATTTGATCGGTTAATTGATTCAAGTTTTCATGATTTTATATGCTTATTTCTCCAGCACGCCAGTTTACTTCGTATCAAGAGGAAAATAGAGTAGAAAATAATCAGGCTCTTGTTTATCCTGTTTTATAGTTGTCTAGAGCGTTTTCTCTTGCCAATGTTATTTCTCATCTACCATTTGAGTATTGTGTAATGTAATTGATTGTTATACCTTACGTGGATATGTTCTCATCCTTGTCATTTAAATTTGCAGCGAAACTCGTCCCTGTTGGATATGGTATTAAGAAATTGCAGATAATGCTCACAATTGTTGATGACCTTGTGTCTGTTGACAATCTCATTGAGGAATATCTGACAGTTGAACCCATAAACGAGCATGTCCAGAGCTGTGACATCGTGGCTTTCAACAAAATATGTAAGTTCCATTTTTATTTTGTTGCACTTGCACATAGCTATTTGAATTTTACGTTTAGATTGCGCAACCCGTTCTAATATCATCTTCAATCCGTTATTTTCTAAATCAACTATTGTTTCTGTTTGCAGAATTTTGAGCTTTTTGTCAGAACCAAAGATCGGTGTTTCTAAGATGTTGCTGGATCTGGGGAAGATGTTTTAGAGCGTCTGTTTTTCATTTCTACTTCTTCGTACTTGTTTTGTCTACCTTTGAAATACTCTTCTTTCCAGCTTTAATTGCGGTGTACTCCCTCTCAGTTTTGTTACTTAAACTGATTTGAAACGAGCTTCTGGAAATAATATTATTATAATTATCATGTTTCATTCTACTATAAATGAATTTTGCTAATTTAAATTGATAGCTTTTGGCATATACATATTAAGATACTAGGATTGAGAATGTTGCCCCAAGAGTTTGAACCATTATAGGTTGATCTAGTGGTAAGTAAGCATGAGTTTGATAGAGGGTTAGGAGATGGATTCAATCCATGTTGTAGAGTTAGATGAATTTTTTGATACTCAAATGTTGTAGAGTTAGACGGGTTTTCTAGCTAGTTGACGAAAAAATGAATGTCATAAAGAAAGAGCCAACTTTGTACATTAATATTTGAGTTTATTTGATACTAAAATGTTGTAGGGTTAGATGAATTTTCTAGGTAGTTGACGAAAAAATGATAAACAAAGAGTTAATTTTGTACATTGAAGCCTGATCCACAAATTGGTAGTATGGAAATGCACATGCTCAAAGTTTGTGTATTAAAAAAAATCATAGATCAAGATGTTGGAATTTAAACCGTCAATTACCGGAAGGGAGAAAAATTATAACAAAATACCCTTTTAACTTTATATTTAGCTTCATAAATATTCATATACTTTCAAAAAACCAATGTTAACTTTCAAACACTTAGCTTCATAAATATTCGTGCACTTTCAAAAAAATAATATTAACTCTCAACTTTCAACTTAGAACAATGTGATTATGTTCTATTGTTCTGCGATGATGATGTGGTTTTCTAACTTTTTGTTTTTGATCACTGTCACACCACATTCTATATGATTATAAAAACATATCATTTAATAATAATAAATTATATATATTACAAAATATGTTATATATTTATAGTTGAAAAGAAAAGAAATATTAATCCTATGGCTTCACACTTTTTTCGTCGTCTTTTCCACCAATCCACAGTCGACTAG

mRNA sequence

ATGATCGTCCTCAGGTATCAACCTTCAAAGGATGACGTTACAGTTTACGAAGCGCTCTCCAAACCGGTATCCAGTGAATATGTTAACGTGTCTAGGTGGTGTAATCACATCGAAGCACTCTTGAGAGTTTCCGCTGTTTTTGGGGAGGGTTCGGGTGTTAAGTTCGATGCAATTGCAACCCCACCTGCTGCAGATGCAAAGTTGGTGTACACCAAATTTCATCAGGGTGCCGATGACGACGACGACGATGACATGGACCTATTTGGTGAAGAGACCGAAGAGGAAAAGAAGGCTGCTGAAGAGCGTGCAGCTTCCATTAAGGCTTCTGCAAAGAAGAAAGAAAGTGGCAAATCATCAGTTCTGATGGATATCAAACCTTGGGATGACGAAACTGACATGAAGAAACTTGAAGAGGCTGTAAGAAGCGTTCAGATGGAAGGCTTACTTTGGGGAGCATCGAAACTCGTCCCTGTTGGATATGGTATTAAGAAATTGCAGATAATGCTCACAATTGTTGATGACCTTGTGTCTGTTGACAATCTCATTGAGGAATATCTGACAGTTGAACCCATAAACGAGCATGTCCAGAGCTGTGACATCGTGGCTTTCAACAAAATATTTGAAAAGAAAAGAAATATTAATCCTATGGCTTCACACTTTTTTCGTCGTCTTTTCCACCAATCCACAGTCGACTAG

Coding sequence (CDS)

ATGATCGTCCTCAGGTATCAACCTTCAAAGGATGACGTTACAGTTTACGAAGCGCTCTCCAAACCGGTATCCAGTGAATATGTTAACGTGTCTAGGTGGTGTAATCACATCGAAGCACTCTTGAGAGTTTCCGCTGTTTTTGGGGAGGGTTCGGGTGTTAAGTTCGATGCAATTGCAACCCCACCTGCTGCAGATGCAAAGTTGGTGTACACCAAATTTCATCAGGGTGCCGATGACGACGACGACGATGACATGGACCTATTTGGTGAAGAGACCGAAGAGGAAAAGAAGGCTGCTGAAGAGCGTGCAGCTTCCATTAAGGCTTCTGCAAAGAAGAAAGAAAGTGGCAAATCATCAGTTCTGATGGATATCAAACCTTGGGATGACGAAACTGACATGAAGAAACTTGAAGAGGCTGTAAGAAGCGTTCAGATGGAAGGCTTACTTTGGGGAGCATCGAAACTCGTCCCTGTTGGATATGGTATTAAGAAATTGCAGATAATGCTCACAATTGTTGATGACCTTGTGTCTGTTGACAATCTCATTGAGGAATATCTGACAGTTGAACCCATAAACGAGCATGTCCAGAGCTGTGACATCGTGGCTTTCAACAAAATATTTGAAAAGAAAAGAAATATTAATCCTATGGCTTCACACTTTTTTCGTCGTCTTTTCCACCAATCCACAGTCGACTAG

Protein sequence

MIVLRYQPSKDDVTVYEALSKPVSSEYVNVSRWCNHIEALLRVSAVFGEGSGVKFDAIATPPAADAKLVYTKFHQGADDDDDDDMDLFGEETEEEKKAAEERAASIKASAKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKIFEKKRNINPMASHFFRRLFHQSTVD
Homology
[Close]
BLAST of HG10018359 vs. NCBI nr
Match: XP_031743738.1 (elongation factor 1-delta isoform X1 [Cucumis sativus])

HSP 1 Score: 368.6 bits (945), Expect = 3.9e-98
Identity = 193/202 (95.54%), Postives = 198/202 (98.02%), Query Frame = 0 

Query: 6   YQPSKDDVTVYEALSKPVSSEYVNVSRWCNHIEALLRVSAVFGEGSGVKFDAIATPPAAD 65
           YQPSKDDVTVYEALSKPVSSEYVNVSRW NHIEALLRVSAVFGEGSGVK DA+ATPPAAD
Sbjct: 72  YQPSKDDVTVYEALSKPVSSEYVNVSRWSNHIEALLRVSAVFGEGSGVKLDAVATPPAAD 131

Query: 66  AKLVYTKFHQGA-DDDDDDDMDLFGEETEEEKKAAEERAASIKASAKKKESGKSSVLMDI 125
           AKLVYT+F+Q A DDDDDDDMDLFGEETEEEKKAAEERAA++KASAKKKESGKSSVLMDI
Sbjct: 132 AKLVYTEFYQAADDDDDDDDMDLFGEETEEEKKAAEERAAAVKASAKKKESGKSSVLMDI 191

Query: 126 KPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEE 185
           KPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEE
Sbjct: 192 KPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEE 251

Query: 186 YLTVEPINEHVQSCDIVAFNKI 207
           YLTVEPINEHVQSCDIVAFNKI
Sbjct: 252 YLTVEPINEHVQSCDIVAFNKI 273

[Close]
BLAST of HG10018359 vs. NCBI nr
Match: XP_004138389.2 (elongation factor 1-delta isoform X2 [Cucumis sativus] >KAE8646580.1 hypothetical protein Csa_005110 [Cucumis sativus])

HSP 1 Score: 349.4 bits (895), Expect = 2.4e-92
Identity = 186/201 (92.54%), Postives = 189/201 (94.03%), Query Frame = 0 

Query: 6   YQPSKDDVTVYEALSKPVSSEYVNVSRWCNHIEALLRVSAVFGEGSGVKFDAIATPPAAD 65
           YQPSKDDVTVYEALSKPVSSEYVNVSRW NHIEALLRVSAVFGEGSGVK DA+ATPPAAD
Sbjct: 72  YQPSKDDVTVYEALSKPVSSEYVNVSRWSNHIEALLRVSAVFGEGSGVKLDAVATPPAAD 131

Query: 66  AKLVYTKFHQGADDDDDDDMDLFGEETEEEKKAAEERAASIKASAKKKESGKSSVLMDIK 125
           AK          DDDDDDDMDLFGEETEEEKKAAEERAA++KASAKKKESGKSSVLMDIK
Sbjct: 132 AK-------AADDDDDDDDMDLFGEETEEEKKAAEERAAAVKASAKKKESGKSSVLMDIK 191

Query: 126 PWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEY 185
           PWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEY
Sbjct: 192 PWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEY 251

Query: 186 LTVEPINEHVQSCDIVAFNKI 207
           LTVEPINEHVQSCDIVAFNKI
Sbjct: 252 LTVEPINEHVQSCDIVAFNKI 265

[Close]
BLAST of HG10018359 vs. NCBI nr
Match: XP_038884883.1 (elongation factor 1-delta-like [Benincasa hispida])

HSP 1 Score: 348.2 bits (892), Expect = 5.4e-92
Identity = 186/201 (92.54%), Postives = 189/201 (94.03%), Query Frame = 0 

Query: 6   YQPSKDDVTVYEALSKPVSSEYVNVSRWCNHIEALLRVSAVFGEGSGVKFDAIATPPAAD 65
           YQPSKDDVTVYEALSKPVSSEYVNVSRW NHIEALLRVSAVFGEGSGVK DA+ATPPAAD
Sbjct: 30  YQPSKDDVTVYEALSKPVSSEYVNVSRWFNHIEALLRVSAVFGEGSGVKLDAVATPPAAD 89

Query: 66  AKLVYTKFHQGADDDDDDDMDLFGEETEEEKKAAEERAASIKASAKKKESGKSSVLMDIK 125
           AK         ADDDDDDDMDLFGEETEEEKKAAEERAA+IKASAKKKESGKSSVLMDIK
Sbjct: 90  AK--------AADDDDDDDMDLFGEETEEEKKAAEERAAAIKASAKKKESGKSSVLMDIK 149

Query: 126 PWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEY 185
           PWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEE+
Sbjct: 150 PWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEH 209

Query: 186 LTVEPINEHVQSCDIVAFNKI 207
           LT EPINEHVQSCDIVAFNKI
Sbjct: 210 LTAEPINEHVQSCDIVAFNKI 222

[Close]
BLAST of HG10018359 vs. NCBI nr
Match: XP_008456798.1 (PREDICTED: elongation factor 1-delta 2-like isoform X2 [Cucumis melo])

HSP 1 Score: 339.0 bits (868), Expect = 3.3e-89
Identity = 181/201 (90.05%), Postives = 185/201 (92.04%), Query Frame = 0 

Query: 6   YQPSKDDVTVYEALSKPVSSEYVNVSRWCNHIEALLRVSAVFGEGSGVKFDAIATPPAAD 65
           YQPSKDDVTVYEALSKPV SEYVNVSRW NHIEALLRVSAVFGEGSGVK DA+ATPPAAD
Sbjct: 30  YQPSKDDVTVYEALSKPVYSEYVNVSRWSNHIEALLRVSAVFGEGSGVKLDAVATPPAAD 89

Query: 66  AKLVYTKFHQGADDDDDDDMDLFGEETEEEKKAAEERAASIKASAKKKESGKSSVLMDIK 125
           AK+            DDDDMDLFGEETEEEKKAAEERAASIKAS+KKKESGKSSVLMDIK
Sbjct: 90  AKVA-----------DDDDMDLFGEETEEEKKAAEERAASIKASSKKKESGKSSVLMDIK 149

Query: 126 PWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEY 185
           PWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEE+
Sbjct: 150 PWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEH 209

Query: 186 LTVEPINEHVQSCDIVAFNKI 207
           LT EPINEHVQSCDIVAFNKI
Sbjct: 210 LTAEPINEHVQSCDIVAFNKI 219

[Close]
BLAST of HG10018359 vs. NCBI nr
Match: KAA0051951.1 (elongation factor 1-delta 2-like isoform X2 [Cucumis melo var. makuwa] >TYK04600.1 elongation factor 1-delta 2-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 339.0 bits (868), Expect = 3.3e-89
Identity = 181/201 (90.05%), Postives = 185/201 (92.04%), Query Frame = 0 

Query: 6   YQPSKDDVTVYEALSKPVSSEYVNVSRWCNHIEALLRVSAVFGEGSGVKFDAIATPPAAD 65
           YQPSKDDVTVYEALSKPV SEYVNVSRW NHIEALLRVSAVFGEGSGVK DA+ATPPAAD
Sbjct: 30  YQPSKDDVTVYEALSKPVYSEYVNVSRWSNHIEALLRVSAVFGEGSGVKLDAVATPPAAD 89

Query: 66  AKLVYTKFHQGADDDDDDDMDLFGEETEEEKKAAEERAASIKASAKKKESGKSSVLMDIK 125
           AK+            DDDDMDLFGEETEEEKKAAEERAASIKAS+KKKESGKSSVLMDIK
Sbjct: 90  AKVA-----------DDDDMDLFGEETEEEKKAAEERAASIKASSKKKESGKSSVLMDIK 149

Query: 126 PWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEY 185
           PWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEE+
Sbjct: 150 PWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEH 209

Query: 186 LTVEPINEHVQSCDIVAFNKI 207
           LT EPINEHVQSCDIVAFNKI
Sbjct: 210 LTAEPINEHVQSCDIVAFNKI 219

[Close]
BLAST of HG10018359 vs. ExPASy Swiss-Prot
Match: Q9SI20 (Elongation factor 1-delta 2 OS=Arabidopsis thaliana OX=3702 GN=At2g18110 PE=1 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 4.2e-79
Identity = 159/209 (76.08%), Postives = 177/209 (84.69%), Query Frame = 0 

Query: 6   YQPSKDDVTVYEALSKPVSSEYVNVSRWCNHIEALLRVSAVFGEGSGV--------KFDA 65
           YQ SKDD+TV+ ALSKP +SE+VNVSRW NHI+ALLR+S V  EGSGV          +A
Sbjct: 29  YQASKDDITVFTALSKPPTSEFVNVSRWFNHIDALLRISGVSAEGSGVIVEGSSPITEEA 88

Query: 66  IATPPAADAKLVYTKFHQGADDDDDDDMDLFGEETEEEKKAAEERAASIKASAKKKESGK 125
           +ATPPAAD+K         A+++DDDD+DLFGEETEEEKKAAEERAAS+KAS KKKESGK
Sbjct: 89  VATPPAADSK------DTAAEEEDDDDVDLFGEETEEEKKAAEERAASVKASTKKKESGK 148

Query: 126 SSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVS 185
           SSVLMDIKPWDDETDMKKLEEAVRS+QMEGL WGASKLVPVGYGIKKL IM TIVDDLVS
Sbjct: 149 SSVLMDIKPWDDETDMKKLEEAVRSIQMEGLFWGASKLVPVGYGIKKLHIMCTIVDDLVS 208

Query: 186 VDNLIEEYLTVEPINEHVQSCDIVAFNKI 207
           +D +IEE LTVEPINE+VQSCDIVAFNKI
Sbjct: 209 IDTMIEEQLTVEPINEYVQSCDIVAFNKI 231

[Close]
BLAST of HG10018359 vs. ExPASy Swiss-Prot
Match: P48006 (Elongation factor 1-delta 1 OS=Arabidopsis thaliana OX=3702 GN=At1g30230 PE=1 SV=2)

HSP 1 Score: 293.1 bits (749), Expect = 2.7e-78
Identity = 156/209 (74.64%), Postives = 177/209 (84.69%), Query Frame = 0 

Query: 6   YQPSKDDVTVYEALSKPVSSEYVNVSRWCNHIEALLRVSAVFGEGSGV--------KFDA 65
           YQ SKDD+TV+ AL+KP +S+YVN SRW NHI+ALLR+S V  EGSGV          +A
Sbjct: 29  YQASKDDITVFAALAKPPTSQYVNASRWYNHIDALLRISGVSAEGSGVIVEGSAPITEEA 88

Query: 66  IATPPAADAKLVYTKFHQGADDDDDDDMDLFGEETEEEKKAAEERAASIKASAKKKESGK 125
           +ATPPAAD+K         AD++DDDD+DLFGEETEEEKKAAEERAAS+KAS KKKESGK
Sbjct: 89  VATPPAADSK------DAAADEEDDDDVDLFGEETEEEKKAAEERAASVKASTKKKESGK 148

Query: 126 SSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVS 185
           SSVL+DIKPWDDETDMKKLEEAV+S+QMEGL WGASKLVPVGYGIKKLQI+ TIVDDLVS
Sbjct: 149 SSVLIDIKPWDDETDMKKLEEAVKSIQMEGLFWGASKLVPVGYGIKKLQILCTIVDDLVS 208

Query: 186 VDNLIEEYLTVEPINEHVQSCDIVAFNKI 207
           +D +IEE LTVEPINE+VQSCDIVAFNKI
Sbjct: 209 IDTMIEEQLTVEPINEYVQSCDIVAFNKI 231

[Close]
BLAST of HG10018359 vs. ExPASy Swiss-Prot
Match: P93447 (Elongation factor 1-delta OS=Pimpinella brachycarpa OX=45043 PE=2 SV=3)

HSP 1 Score: 288.1 bits (736), Expect = 8.7e-77
Identity = 150/203 (73.89%), Postives = 174/203 (85.71%), Query Frame = 0 

Query: 6   YQPSKDDVTVYEALSKPVSSEYVNVSRWCNHIEALLRVSAVFGEGSGVKFD--AIATPPA 65
           YQ SKDD+ V+ AL+KP SS+YVNVSRW NH+EALLR+S V  EG GV  +  ++ATPP 
Sbjct: 30  YQASKDDLAVHAALAKPPSSKYVNVSRWYNHVEALLRISGVSAEGCGVTVEGSSVATPPV 89

Query: 66  ADAKLVYTKFHQGADDDDDDDMDLFGEETEEEKKAAEERAASIKASAKKKESGKSSVLMD 125
           AD K         A+DDDDDD+DLFGEETEEEKKA+EERAA++KAS KKKESGKSSVL+D
Sbjct: 90  ADTKA------SAAEDDDDDDVDLFGEETEEEKKASEERAAAVKASGKKKESGKSSVLLD 149

Query: 126 IKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIE 185
           +KPWDDETDM KLEEAVRS++M+GLLWGASKLV VGYGIKKLQIMLTIVDDLVSVD+L+E
Sbjct: 150 VKPWDDETDMTKLEEAVRSIKMDGLLWGASKLVAVGYGIKKLQIMLTIVDDLVSVDDLVE 209

Query: 186 EYLTVEPINEHVQSCDIVAFNKI 207
           +YLT EP NE++QSCDIVAFNKI
Sbjct: 210 DYLTAEPANEYIQSCDIVAFNKI 226

[Close]
BLAST of HG10018359 vs. ExPASy Swiss-Prot
Match: O81918 (Elongation factor 1-delta OS=Beta vulgaris OX=161934 PE=2 SV=3)

HSP 1 Score: 280.0 bits (715), Expect = 2.4e-74
Identity = 155/208 (74.52%), Postives = 171/208 (82.21%), Query Frame = 0 

Query: 6   YQPSKDDVTVYEALSKPVSSEYVNVSRWCNHIEALLRVSAVFGEGSGVKFDA------IA 65
           YQ SKDD+TV+ A+ K   + YVNVSRW  HI+ALLR+S V GEGSGV  +       +A
Sbjct: 30  YQASKDDLTVFSAVPKASLASYVNVSRWYKHIDALLRISGVSGEGSGVTVEGNAPASDVA 89

Query: 66  TPPAADAKLVYTKFHQGADDDDDDDMDLFGEETEEEKKAAEERAASIKAS-AKKKESGKS 125
           TPPAAD+K         ADDDDDDD+DLFGEETEEEKKAAEERAA+  A  AKKKESGKS
Sbjct: 90  TPPAADSKA------SAADDDDDDDVDLFGEETEEEKKAAEERAAAAAAKPAKKKESGKS 149

Query: 126 SVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSV 185
           SVL+D+KPWDDETDMKKLEEAVRSVQ EGL  GASKLVPVGYGIKKL IM+TIVDDLVSV
Sbjct: 150 SVLLDVKPWDDETDMKKLEEAVRSVQQEGLTLGASKLVPVGYGIKKLTIMMTIVDDLVSV 209

Query: 186 DNLIEEYLTVEPINEHVQSCDIVAFNKI 207
           DNLIE+YLTVEPINE+VQSCDIVAFNKI
Sbjct: 210 DNLIEDYLTVEPINEYVQSCDIVAFNKI 231

[Close]
BLAST of HG10018359 vs. ExPASy Swiss-Prot
Match: Q40680 (Elongation factor 1-delta 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0614500 PE=2 SV=3)

HSP 1 Score: 275.0 bits (702), Expect = 7.7e-73
Identity = 144/201 (71.64%), Postives = 165/201 (82.09%), Query Frame = 0 

Query: 6   YQPSKDDVTVYEALSKPVSSEYVNVSRWCNHIEALLRVSAVFGEGSGVKFDAIATPPAAD 65
           YQ S DD+ VY A S   SS Y NV+RW  HI+ALLR+S V  +G GVK ++ A P A+ 
Sbjct: 30  YQASNDDLAVYSAFSTAPSSSYTNVARWFTHIDALLRLSGVTADGQGVKVESTAVPSAST 89

Query: 66  AKLVYTKFHQGADDDDDDDMDLFGEETEEEKKAAEERAASIKASAKKKESGKSSVLMDIK 125
             +   K    ADDDDDDD+DLFGEETEEEKKAAEERAA++KAS KKKESGKSSVL+D+K
Sbjct: 90  PDVADAK-APAADDDDDDDVDLFGEETEEEKKAAEERAAAVKASGKKKESGKSSVLLDVK 149

Query: 126 PWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEY 185
           PWDDETDM KLEEAVR+V+MEGLLWGASKLVPVGYGIKKLQIM+TIVDDLVSVD+LIE+Y
Sbjct: 150 PWDDETDMTKLEEAVRNVKMEGLLWGASKLVPVGYGIKKLQIMMTIVDDLVSVDSLIEDY 209

Query: 186 LTVEPINEHVQSCDIVAFNKI 207
              EP NE++QSCDIVAFNKI
Sbjct: 210 FYTEPANEYIQSCDIVAFNKI 229

[Close]
BLAST of HG10018359 vs. ExPASy TrEMBL
Match: A0A0A0KDI4 (EF1_GNE domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G014660 PE=3 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 1.2e-92
Identity = 186/201 (92.54%), Postives = 189/201 (94.03%), Query Frame = 0 

Query: 6   YQPSKDDVTVYEALSKPVSSEYVNVSRWCNHIEALLRVSAVFGEGSGVKFDAIATPPAAD 65
           YQPSKDDVTVYEALSKPVSSEYVNVSRW NHIEALLRVSAVFGEGSGVK DA+ATPPAAD
Sbjct: 72  YQPSKDDVTVYEALSKPVSSEYVNVSRWSNHIEALLRVSAVFGEGSGVKLDAVATPPAAD 131

Query: 66  AKLVYTKFHQGADDDDDDDMDLFGEETEEEKKAAEERAASIKASAKKKESGKSSVLMDIK 125
           AK          DDDDDDDMDLFGEETEEEKKAAEERAA++KASAKKKESGKSSVLMDIK
Sbjct: 132 AK-------AADDDDDDDDMDLFGEETEEEKKAAEERAAAVKASAKKKESGKSSVLMDIK 191

Query: 126 PWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEY 185
           PWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEY
Sbjct: 192 PWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEY 251

Query: 186 LTVEPINEHVQSCDIVAFNKI 207
           LTVEPINEHVQSCDIVAFNKI
Sbjct: 252 LTVEPINEHVQSCDIVAFNKI 265

[Close]
BLAST of HG10018359 vs. ExPASy TrEMBL
Match: A0A1S3C5C6 (elongation factor 1-delta 2-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496637 PE=3 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 1.6e-89
Identity = 181/201 (90.05%), Postives = 185/201 (92.04%), Query Frame = 0 

Query: 6   YQPSKDDVTVYEALSKPVSSEYVNVSRWCNHIEALLRVSAVFGEGSGVKFDAIATPPAAD 65
           YQPSKDDVTVYEALSKPV SEYVNVSRW NHIEALLRVSAVFGEGSGVK DA+ATPPAAD
Sbjct: 30  YQPSKDDVTVYEALSKPVYSEYVNVSRWSNHIEALLRVSAVFGEGSGVKLDAVATPPAAD 89

Query: 66  AKLVYTKFHQGADDDDDDDMDLFGEETEEEKKAAEERAASIKASAKKKESGKSSVLMDIK 125
           AK+            DDDDMDLFGEETEEEKKAAEERAASIKAS+KKKESGKSSVLMDIK
Sbjct: 90  AKVA-----------DDDDMDLFGEETEEEKKAAEERAASIKASSKKKESGKSSVLMDIK 149

Query: 126 PWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEY 185
           PWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEE+
Sbjct: 150 PWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEH 209

Query: 186 LTVEPINEHVQSCDIVAFNKI 207
           LT EPINEHVQSCDIVAFNKI
Sbjct: 210 LTAEPINEHVQSCDIVAFNKI 219

[Close]
BLAST of HG10018359 vs. ExPASy TrEMBL
Match: A0A5A7UEH8 (Elongation factor 1-delta 2-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G002380 PE=3 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 1.6e-89
Identity = 181/201 (90.05%), Postives = 185/201 (92.04%), Query Frame = 0 

Query: 6   YQPSKDDVTVYEALSKPVSSEYVNVSRWCNHIEALLRVSAVFGEGSGVKFDAIATPPAAD 65
           YQPSKDDVTVYEALSKPV SEYVNVSRW NHIEALLRVSAVFGEGSGVK DA+ATPPAAD
Sbjct: 30  YQPSKDDVTVYEALSKPVYSEYVNVSRWSNHIEALLRVSAVFGEGSGVKLDAVATPPAAD 89

Query: 66  AKLVYTKFHQGADDDDDDDMDLFGEETEEEKKAAEERAASIKASAKKKESGKSSVLMDIK 125
           AK+            DDDDMDLFGEETEEEKKAAEERAASIKAS+KKKESGKSSVLMDIK
Sbjct: 90  AKVA-----------DDDDMDLFGEETEEEKKAAEERAASIKASSKKKESGKSSVLMDIK 149

Query: 126 PWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEY 185
           PWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEE+
Sbjct: 150 PWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEH 209

Query: 186 LTVEPINEHVQSCDIVAFNKI 207
           LT EPINEHVQSCDIVAFNKI
Sbjct: 210 LTAEPINEHVQSCDIVAFNKI 219

[Close]
BLAST of HG10018359 vs. ExPASy TrEMBL
Match: A0A1S3C464 (elongation factor 1-delta 2-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496637 PE=3 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 1.6e-89
Identity = 181/201 (90.05%), Postives = 185/201 (92.04%), Query Frame = 0 

Query: 6   YQPSKDDVTVYEALSKPVSSEYVNVSRWCNHIEALLRVSAVFGEGSGVKFDAIATPPAAD 65
           YQPSKDDVTVYEALSKPV SEYVNVSRW NHIEALLRVSAVFGEGSGVK DA+ATPPAAD
Sbjct: 30  YQPSKDDVTVYEALSKPVYSEYVNVSRWSNHIEALLRVSAVFGEGSGVKLDAVATPPAAD 89

Query: 66  AKLVYTKFHQGADDDDDDDMDLFGEETEEEKKAAEERAASIKASAKKKESGKSSVLMDIK 125
           AK+            DDDDMDLFGEETEEEKKAAEERAASIKAS+KKKESGKSSVLMDIK
Sbjct: 90  AKVA-----------DDDDMDLFGEETEEEKKAAEERAASIKASSKKKESGKSSVLMDIK 149

Query: 126 PWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEY 185
           PWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEE+
Sbjct: 150 PWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEH 209

Query: 186 LTVEPINEHVQSCDIVAFNKI 207
           LT EPINEHVQSCDIVAFNKI
Sbjct: 210 LTAEPINEHVQSCDIVAFNKI 219

[Close]
BLAST of HG10018359 vs. ExPASy TrEMBL
Match: A0A6J1C786 (elongation factor 1-delta-like OS=Momordica charantia OX=3673 GN=LOC111009043 PE=3 SV=1)

HSP 1 Score: 334.7 bits (857), Expect = 3.0e-88
Identity = 180/204 (88.24%), Postives = 187/204 (91.67%), Query Frame = 0 

Query: 6   YQPSKDDVTVYEALSKPVSSEYVNVSRWCNHIEALLRVSAVFGEGSGVKF---DAIATPP 65
           YQ SKDD+ VYEALSKPVSSEYVNVSRW NHIEALLR+SAVFGEGSGVKF   +AIATPP
Sbjct: 30  YQASKDDIAVYEALSKPVSSEYVNVSRWINHIEALLRISAVFGEGSGVKFQSAEAIATPP 89

Query: 66  AADAKLVYTKFHQGADDDDDDDMDLFGEETEEEKKAAEERAASIKASAKKKESGKSSVLM 125
           AADAK         ADDDDDDDMDLFGEETEEEKKAAEERAAS+KAS KKKESGKSSVLM
Sbjct: 90  AADAKA-----SAAADDDDDDDMDLFGEETEEEKKAAEERAASVKASGKKKESGKSSVLM 149

Query: 126 DIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLI 185
           DIKPWDDETDMKKLEEAVR VQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLI
Sbjct: 150 DIKPWDDETDMKKLEEAVRGVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLI 209

Query: 186 EEYLTVEPINEHVQSCDIVAFNKI 207
           EE+LTVEPIN++VQSCDIVAFNKI
Sbjct: 210 EEHLTVEPINDYVQSCDIVAFNKI 228

[Close]
BLAST of HG10018359 vs. TAIR 10
Match: AT2G18110.1 (Translation elongation factor EF1B/ribosomal protein S6 family protein )

HSP 1 Score: 295.8 bits (756), Expect = 3.0e-80
Identity = 159/209 (76.08%), Postives = 177/209 (84.69%), Query Frame = 0 

Query: 6   YQPSKDDVTVYEALSKPVSSEYVNVSRWCNHIEALLRVSAVFGEGSGV--------KFDA 65
           YQ SKDD+TV+ ALSKP +SE+VNVSRW NHI+ALLR+S V  EGSGV          +A
Sbjct: 29  YQASKDDITVFTALSKPPTSEFVNVSRWFNHIDALLRISGVSAEGSGVIVEGSSPITEEA 88

Query: 66  IATPPAADAKLVYTKFHQGADDDDDDDMDLFGEETEEEKKAAEERAASIKASAKKKESGK 125
           +ATPPAAD+K         A+++DDDD+DLFGEETEEEKKAAEERAAS+KAS KKKESGK
Sbjct: 89  VATPPAADSK------DTAAEEEDDDDVDLFGEETEEEKKAAEERAASVKASTKKKESGK 148

Query: 126 SSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVS 185
           SSVLMDIKPWDDETDMKKLEEAVRS+QMEGL WGASKLVPVGYGIKKL IM TIVDDLVS
Sbjct: 149 SSVLMDIKPWDDETDMKKLEEAVRSIQMEGLFWGASKLVPVGYGIKKLHIMCTIVDDLVS 208

Query: 186 VDNLIEEYLTVEPINEHVQSCDIVAFNKI 207
           +D +IEE LTVEPINE+VQSCDIVAFNKI
Sbjct: 209 IDTMIEEQLTVEPINEYVQSCDIVAFNKI 231

[Close]
BLAST of HG10018359 vs. TAIR 10
Match: AT1G30230.2 (Glutathione S-transferase, C-terminal-like;Translation elongation factor EF1B/ribosomal protein S6 )

HSP 1 Score: 293.9 bits (751), Expect = 1.1e-79
Identity = 157/222 (70.72%), Postives = 182/222 (81.98%), Query Frame = 0 

Query: 6   YQPSKDDVTVYEALSKPVSSEYVNVSRWCNHIEALLRVSAVFGEGSGV--------KFDA 65
           YQ SKDD+TV+ AL+KP +S+YVN SRW NHI+ALLR+S V  EGSGV          +A
Sbjct: 29  YQASKDDITVFAALAKPPTSQYVNASRWYNHIDALLRISGVSAEGSGVIVEGSAPITEEA 88

Query: 66  IATPPAADAKLVYTKFHQGADDDDDDDMDLFGEETEEEKKAAEERAASIKASAKKKESGK 125
           +ATPPAAD+K         AD++DDDD+DLFGEETEEEKKAAEERAAS+KAS KKKESGK
Sbjct: 89  VATPPAADSK------DAAADEEDDDDVDLFGEETEEEKKAAEERAASVKASTKKKESGK 148

Query: 126 SSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVS 185
           SSVL+DIKPWDDETDMKKLEEAV+S+QMEGL WGASKLVPVGYGIKKLQI+ TIVDDLVS
Sbjct: 149 SSVLIDIKPWDDETDMKKLEEAVKSIQMEGLFWGASKLVPVGYGIKKLQILCTIVDDLVS 208

Query: 186 VDNLIEEYLTVEPINEHVQSCDIVAFNKIFEKKRNINPMASH 220
           +D +IEE LTVEPINE+VQSCDIVAFNKI + ++    +  H
Sbjct: 209 IDTMIEEQLTVEPINEYVQSCDIVAFNKICKMEKASRNVCVH 244

[Close]
BLAST of HG10018359 vs. TAIR 10
Match: AT1G30230.1 (Glutathione S-transferase, C-terminal-like;Translation elongation factor EF1B/ribosomal protein S6 )

HSP 1 Score: 293.1 bits (749), Expect = 1.9e-79
Identity = 156/209 (74.64%), Postives = 177/209 (84.69%), Query Frame = 0 

Query: 6   YQPSKDDVTVYEALSKPVSSEYVNVSRWCNHIEALLRVSAVFGEGSGV--------KFDA 65
           YQ SKDD+TV+ AL+KP +S+YVN SRW NHI+ALLR+S V  EGSGV          +A
Sbjct: 29  YQASKDDITVFAALAKPPTSQYVNASRWYNHIDALLRISGVSAEGSGVIVEGSAPITEEA 88

Query: 66  IATPPAADAKLVYTKFHQGADDDDDDDMDLFGEETEEEKKAAEERAASIKASAKKKESGK 125
           +ATPPAAD+K         AD++DDDD+DLFGEETEEEKKAAEERAAS+KAS KKKESGK
Sbjct: 89  VATPPAADSK------DAAADEEDDDDVDLFGEETEEEKKAAEERAASVKASTKKKESGK 148

Query: 126 SSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVS 185
           SSVL+DIKPWDDETDMKKLEEAV+S+QMEGL WGASKLVPVGYGIKKLQI+ TIVDDLVS
Sbjct: 149 SSVLIDIKPWDDETDMKKLEEAVKSIQMEGLFWGASKLVPVGYGIKKLQILCTIVDDLVS 208

Query: 186 VDNLIEEYLTVEPINEHVQSCDIVAFNKI 207
           +D +IEE LTVEPINE+VQSCDIVAFNKI
Sbjct: 209 IDTMIEEQLTVEPINEYVQSCDIVAFNKI 231

[Close]
BLAST of HG10018359 vs. TAIR 10
Match: AT5G19510.1 (Translation elongation factor EF1B/ribosomal protein S6 family protein )

HSP 1 Score: 219.9 bits (559), Expect = 2.1e-57
Identity = 128/201 (63.68%), Postives = 147/201 (73.13%), Query Frame = 0 

Query: 7   QPSKDDVTVYEALSKPVSSEYVNVSRWCNHIEALLRVSAVFGEGSGVKF-DAIATPPAAD 66
           Q S DDV VY A+    S  + N S+W   + + L  S   G+  GV+F  + A  PA +
Sbjct: 31  QLSVDDVKVYAAVPVKPSDAFPNASKWYESVASQLAKSFP-GKAVGVQFGGSAAAAPAVE 90

Query: 67  AKLVYTKFHQGADDDDDDDMDLFGEETEEEKKAAEERAASIKASAKKKESGKSSVLMDIK 126
           A+         A  DDDDDMDLFG+ETEEEKKAAEER A+ K + K KESGKSSVLMD+K
Sbjct: 91  AEA------PAAAADDDDDMDLFGDETEEEKKAAEEREAAKKDTKKPKESGKSSVLMDVK 150

Query: 127 PWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEY 186
           PWDDETDMKKLEEAVR V+M GL WGASKLVPVGYGIKKL IM TIVDDLVS DNLIE++
Sbjct: 151 PWDDETDMKKLEEAVRGVEMPGLFWGASKLVPVGYGIKKLTIMFTIVDDLVSPDNLIEDF 210

Query: 187 LTVEPINEHVQSCDIVAFNKI 207
           LT EP NE++QSCDIVAFNKI
Sbjct: 211 LTSEPNNEYIQSCDIVAFNKI 224

[Close]
BLAST of HG10018359 vs. TAIR 10
Match: AT5G12110.1 (Glutathione S-transferase, C-terminal-like;Translation elongation factor EF1B/ribosomal protein S6 )

HSP 1 Score: 212.6 bits (540), Expect = 3.3e-55
Identity = 122/200 (61.00%), Postives = 147/200 (73.50%), Query Frame = 0 

Query: 7   QPSKDDVTVYEALSKPVSSEYVNVSRWCNHIEALLRVSAVFGEGSGVKFDAIATPPAADA 66
           Q S DDV VY A+ +     + N S+W + + + L  S   G+  GV+      PP ++A
Sbjct: 31  QLSVDDVKVYAAVLENPGDGFPNASKWYDSVASHLAKSFP-GKADGVRVGGGVAPP-SEA 90

Query: 67  KLVYTKFHQGADDDDDDDMDLFGEETEEEKKAAEERAASIKASAKKKESGKSSVLMDIKP 126
                +     D DDDDD+DLF +ETE+EKKAAEER A+ K + K KESGKSSVL+++KP
Sbjct: 91  HPHTEEPAADGDGDDDDDIDLFADETEDEKKAAEEREAAKKDTKKTKESGKSSVLLEVKP 150

Query: 127 WDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEYL 186
           WDDETDMKKLEEAVRSVQM GL WGASKLVPVGYGIKKL IM+TIVDDLVSVDNLIE++L
Sbjct: 151 WDDETDMKKLEEAVRSVQMPGLTWGASKLVPVGYGIKKLTIMMTIVDDLVSVDNLIEDHL 210

Query: 187 TVEPINEHVQSCDIVAFNKI 207
           T EP NE++QS DIVAFNKI
Sbjct: 211 TSEPNNEYIQSVDIVAFNKI 228

The following BLAST results are available for this feature:
BLAST of HG10018359 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_031743738.13.9e-9895.54elongation factor 1-delta isoform X1 [Cucumis sativus][more]
XP_004138389.22.4e-9292.54elongation factor 1-delta isoform X2 [Cucumis sativus] >KAE8646580.1 hypothetica... [more]
XP_038884883.15.4e-9292.54elongation factor 1-delta-like [Benincasa hispida][more]
XP_008456798.13.3e-8990.05PREDICTED: elongation factor 1-delta 2-like isoform X2 [Cucumis melo][more]
KAA0051951.13.3e-8990.05elongation factor 1-delta 2-like isoform X2 [Cucumis melo var. makuwa] >TYK04600... [more]
BLAST of HG10018359 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SI204.2e-7976.08Elongation factor 1-delta 2 OS=Arabidopsis thaliana OX=3702 GN=At2g18110 PE=1 SV... [more]
P480062.7e-7874.64Elongation factor 1-delta 1 OS=Arabidopsis thaliana OX=3702 GN=At1g30230 PE=1 SV... [more]
P934478.7e-7773.89Elongation factor 1-delta OS=Pimpinella brachycarpa OX=45043 PE=2 SV=3[more]
O819182.4e-7474.52Elongation factor 1-delta OS=Beta vulgaris OX=161934 PE=2 SV=3[more]
Q406807.7e-7371.64Elongation factor 1-delta 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g061... [more]
BLAST of HG10018359 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KDI41.2e-9292.54EF1_GNE domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G014660 PE=... [more]
A0A1S3C5C61.6e-8990.05elongation factor 1-delta 2-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496... [more]
A0A5A7UEH81.6e-8990.05Elongation factor 1-delta 2-like isoform X2 OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3C4641.6e-8990.05elongation factor 1-delta 2-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496... [more]
A0A6J1C7863.0e-8888.24elongation factor 1-delta-like OS=Momordica charantia OX=3673 GN=LOC111009043 PE... [more]
BLAST of HG10018359 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G18110.13.0e-8076.08Translation elongation factor EF1B/ribosomal protein S6 family protein [more]
AT1G30230.21.1e-7970.72Glutathione S-transferase, C-terminal-like;Translation elongation factor EF1B/r... [more]
AT1G30230.11.9e-7974.64Glutathione S-transferase, C-terminal-like;Translation elongation factor EF1B/r... [more]
AT5G19510.12.1e-5763.68Translation elongation factor EF1B/ribosomal protein S6 family protein [more]
AT5G12110.13.3e-5561.00Glutathione S-transferase, C-terminal-like;Translation elongation factor EF1B/r... [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 89..109
NoneNo IPR availablePANTHERPTHR11595EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBERcoord: 4..208
NoneNo IPR availablePANTHERPTHR11595:SF73ELONGATION FACTOR 1-DELTA 1-RELATEDcoord: 4..208
IPR014038Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange domainSMARTSM00888EF1_GNE_2coord: 117..206
e-value: 7.4E-37
score: 138.4
IPR014038Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange domainPFAMPF00736EF1_GNEcoord: 119..206
e-value: 9.1E-34
score: 115.5
IPR014038Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange domainCDDcd00292EF1Bcoord: 115..206
e-value: 5.95989E-40
score: 130.794
IPR014717Translation elongation factor EF1B/ribosomal protein S6GENE3D3.30.70.60coord: 110..206
e-value: 1.1E-44
score: 152.3
IPR001326Translation elongation factor EF1B, beta/delta chains, conserved sitePROSITEPS00825EF1BD_2coord: 195..206
IPR001326Translation elongation factor EF1B, beta/delta chains, conserved sitePROSITEPS00824EF1BD_1coord: 81..89
IPR036219Translation elongation factor eEF-1beta-like superfamilySUPERFAMILY54984eEF-1beta-likecoord: 114..206

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10018359.1HG10018359.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0050790 regulation of catalytic activity
biological_process GO:0006414 translational elongation
cellular_component GO:0005829 cytosol
cellular_component GO:0005853 eukaryotic translation elongation factor 1 complex
molecular_function GO:0005085 guanyl-nucleotide exchange factor activity
molecular_function GO:0003746 translation elongation factor activity