HG10018311.1 (mRNA) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAAATAACTCTCAGAACATGAGCTATCATGCTGGAGAAGCCAAGGGCCAAACTGAAGAAAAAACAAGCAATCTGATGGAGAAGGCAAGTCATGTAGCTCAATCGGCAAAAGAGACCGTACAAGAGGCAGGCCAACAAATGATGGTCAAAGCTCAAGAAGCAACTGAAGCTATCAAGGATGCGACTGGTTTTAACAAATGA ATGGCAAATAACTCTCAGAACATGAGCTATCATGCTGGAGAAGCCAAGGGCCAAACTGAAGAAAAAACAAGCAATCTGATGGAGAAGGCAAGTCATGTAGCTCAATCGGCAAAAGAGACCGTACAAGAGGCAGGCCAACAAATGATGGTCAAAGCTCAAGAAGCAACTGAAGCTATCAAGGATGCGACTGGTTTTAACAAATGA ATGGCAAATAACTCTCAGAACATGAGCTATCATGCTGGAGAAGCCAAGGGCCAAACTGAAGAAAAAACAAGCAATCTGATGGAGAAGGCAAGTCATGTAGCTCAATCGGCAAAAGAGACCGTACAAGAGGCAGGCCAACAAATGATGGTCAAAGCTCAAGAAGCAACTGAAGCTATCAAGGATGCGACTGGTTTTAACAAATGA MANNSQNMSYHAGEAKGQTEEKTSNLMEKASHVAQSAKETVQEAGQQMMVKAQEATEAIKDATGFNK Homology
BLAST of HG10018311.1 vs. NCBI nr
Match: XP_022134444.1 (stress-induced protein KIN2-like isoform X3 [Momordica charantia] >XP_022134445.1 stress-induced protein KIN2-like isoform X3 [Momordica charantia]) HSP 1 Score: 99.0 bits (245), Expect = 1.7e-17 Identity = 54/67 (80.60%), Postives = 59/67 (88.06%), Query Frame = 0
BLAST of HG10018311.1 vs. NCBI nr
Match: XP_038891164.1 (uncharacterized protein LOC120080541 [Benincasa hispida]) HSP 1 Score: 96.7 bits (239), Expect = 8.3e-17 Identity = 52/67 (77.61%), Postives = 57/67 (85.07%), Query Frame = 0
BLAST of HG10018311.1 vs. NCBI nr
Match: XP_022134443.1 (stress-induced protein KIN2-like isoform X2 [Momordica charantia]) HSP 1 Score: 95.5 bits (236), Expect = 1.8e-16 Identity = 52/64 (81.25%), Postives = 56/64 (87.50%), Query Frame = 0
BLAST of HG10018311.1 vs. NCBI nr
Match: XP_008459448.1 (PREDICTED: stress-induced protein KIN2-like [Cucumis melo] >KAA0039403.1 stress-induced protein KIN2-like [Cucumis melo var. makuwa] >TYK00591.1 stress-induced protein KIN2-like [Cucumis melo var. makuwa]) HSP 1 Score: 95.5 bits (236), Expect = 1.8e-16 Identity = 52/67 (77.61%), Postives = 58/67 (86.57%), Query Frame = 0
BLAST of HG10018311.1 vs. NCBI nr
Match: XP_022134441.1 (stress-induced protein KIN2-like isoform X1 [Momordica charantia] >XP_022134442.1 stress-induced protein KIN2-like isoform X1 [Momordica charantia]) HSP 1 Score: 95.5 bits (236), Expect = 1.8e-16 Identity = 52/64 (81.25%), Postives = 56/64 (87.50%), Query Frame = 0
BLAST of HG10018311.1 vs. ExPASy Swiss-Prot
Match: O49817 (Late embryogenesis abundant protein 2 OS=Cicer arietinum OX=3827 PE=2 SV=1) HSP 1 Score: 44.7 bits (104), Expect = 4.9e-04 Identity = 26/59 (44.07%), Postives = 36/59 (61.02%), Query Frame = 0
BLAST of HG10018311.1 vs. ExPASy TrEMBL
Match: A0A6J1BYR6 (stress-induced protein KIN2-like isoform X3 OS=Momordica charantia OX=3673 GN=LOC111006689 PE=4 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 8.1e-18 Identity = 54/67 (80.60%), Postives = 59/67 (88.06%), Query Frame = 0
BLAST of HG10018311.1 vs. ExPASy TrEMBL
Match: A0A6J1BXT6 (stress-induced protein KIN2-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111006689 PE=4 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 8.9e-17 Identity = 52/64 (81.25%), Postives = 56/64 (87.50%), Query Frame = 0
BLAST of HG10018311.1 vs. ExPASy TrEMBL
Match: A0A5A7T8W6 (Stress-induced protein KIN2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G002080 PE=4 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 8.9e-17 Identity = 52/67 (77.61%), Postives = 58/67 (86.57%), Query Frame = 0
BLAST of HG10018311.1 vs. ExPASy TrEMBL
Match: A0A6J1C204 (stress-induced protein KIN2-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111006689 PE=4 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 8.9e-17 Identity = 52/64 (81.25%), Postives = 56/64 (87.50%), Query Frame = 0
BLAST of HG10018311.1 vs. ExPASy TrEMBL
Match: A0A1S3CAA8 (stress-induced protein KIN2-like OS=Cucumis melo OX=3656 GN=LOC103498579 PE=4 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 8.9e-17 Identity = 52/67 (77.61%), Postives = 58/67 (86.57%), Query Frame = 0
BLAST of HG10018311.1 vs. TAIR 10
Match: AT5G53820.1 (Late embryogenesis abundant protein (LEA) family protein ) HSP 1 Score: 82.8 bits (203), Expect = 1.1e-16 Identity = 43/67 (64.18%), Postives = 58/67 (86.57%), Query Frame = 0
BLAST of HG10018311.1 vs. TAIR 10
Match: AT5G38760.1 (Late embryogenesis abundant protein (LEA) family protein ) HSP 1 Score: 81.6 bits (200), Expect = 2.6e-16 Identity = 42/67 (62.69%), Postives = 58/67 (86.57%), Query Frame = 0
BLAST of HG10018311.1 vs. TAIR 10
Match: AT3G02480.1 (Late embryogenesis abundant protein (LEA) family protein ) HSP 1 Score: 65.5 bits (158), Expect = 1.9e-11 Identity = 34/65 (52.31%), Postives = 46/65 (70.77%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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