HG10013585.1 (mRNA) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10013585.1
Type	mRNA
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Chaperone protein DnaJ-like
Location	Chr02: 2791885 .. 2793303 (+)
Sequence length	396
RNA-Seq Expression	HG10013585.1
Synteny	HG10013585.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTCTTCGTCTTTCTCGGCGTCGGCAAATTGCTTCAGTTCCAGAACTACAGTATCAGGTAACTCAAAATCATTTTCATTCTCGTAAAGATTTGCAGAAACATTTTTAGTGAACTACAAAAAACACTTGCAATTTATCAATCTTCTCACGAATTTCGCAGCAATTAGAGGTTGTAGTAATCAAAAGCTCAACCTAATTAACAATGGCTTCCATGATTATTCTTCCCCTGCTCGATTCCCTCATCTAAATGTCAAGGTTCTGCTTCTTCTCGATCGCCTTCTCCTGTTTGATTTTTGTTTGAAATGAAGCGATAATGTGTATATCATCTAAATTAGAGTCTGGAGAATGATTTGAAATGTTAAAATTAATGGAAATTGAAAATGTTTACTGTGTTTTCTGATCAATTAGGCTGCGAAGAATGATCGGAACACAAAACCTAATAGCGTGATTTGTGGCGATTGCGATGGAAATGGTGAGTTGATTTATGAGATTGGTATAGACGATTTAGGTTTTCCGAATGGCTGATGGTTTTGTAAAACTGAATGAAATAGGTGCTGTTCTTTGCTCACAATGCAAAGGAAATGGAGTTAATGCTGTTGATTTCTTCAATGGACAGTTCAAAGCCGGCGCATCCTGTTGGCTGTGCGGGTAATTTTGTTTTCTTCAATTATTTAATTGGAGTTTTTGTCAAATTGAAATTTGATTGACTTTTTCAAAATAAGTTTTTCTTACTTAGCAATAATTTTTTAAAAATTTTCTACACTTATTTCTTCTCGCTCCCTTTACATATGTATAGGTTGGGGGTTGCATATTGAAGATTTTTGTATGAAGGGCCTACATTTCACGTTCAAAATGTTGTTTGATCCAAAGTTTTAAAATAATGAAAAAACAATATTTTGTTGATGTCATGAACCACTTGTCGATGCTCTTTTGACGAGTGAGAGAGCAAAGAGAAGTGCGAACATGAGAGTGTGGGAGGAAGAGTCCTAGCCGTGTGAGAACATAATTGTATTAAATTAGTCGAGTGAGCACAAACGCTAAGAGGAAGGAGGAGTTGAGTGTAAGGGAGTGACACACGAAAAAAAGGTTATAAATCCTTAATTATTTTAAAAAAATTTGAGTCAAGTGACATTTACCATAAATTTAGATCATCCGTACAAAAGGAAAGTGAGAGAGAGAGGAGAGAAGGAGAGGAAGATAGAATAAAAAGAATATATATTTTTTTTAAAAGTTTGAAAATGATTAGAAACCTTTATTTTGAAAACGAGGTCAAATCTTATTTTATTCCAAATTTGAAATTTACTATGTGTTTGCTGATCAAAGGCTTTGTGTTGCAGTGGGAGAAAGGAAATGTTGTGTGGGAACTGCAATGGGGCTGGCTTCATTGGAGGTTTCCTCAGCACTTATGACCAATAG

mRNA sequence

ATGGCGTCTTCGTCTTTCTCGGCGTCGGCAAATTGCTTCAGTTCCAGAACTACAGTATCAGCAATTAGAGGTTGTAGTAATCAAAAGCTCAACCTAATTAACAATGGCTTCCATGATTATTCTTCCCCTGCTCGATTCCCTCATCTAAATGTCAAGGCTGCGAAGAATGATCGGAACACAAAACCTAATAGCGTGATTTGTGGCGATTGCGATGGAAATGGTGCTGTTCTTTGCTCACAATGCAAAGGAAATGGAGTTAATGCTGTTGATTTCTTCAATGGACAGTTCAAAGCCGGCGCATCCTGTTGGCTGTGCGGTGGGAGAAAGGAAATGTTGTGTGGGAACTGCAATGGGGCTGGCTTCATTGGAGGTTTCCTCAGCACTTATGACCAATAG

Coding sequence (CDS)

ATGGCGTCTTCGTCTTTCTCGGCGTCGGCAAATTGCTTCAGTTCCAGAACTACAGTATCAGCAATTAGAGGTTGTAGTAATCAAAAGCTCAACCTAATTAACAATGGCTTCCATGATTATTCTTCCCCTGCTCGATTCCCTCATCTAAATGTCAAGGCTGCGAAGAATGATCGGAACACAAAACCTAATAGCGTGATTTGTGGCGATTGCGATGGAAATGGTGCTGTTCTTTGCTCACAATGCAAAGGAAATGGAGTTAATGCTGTTGATTTCTTCAATGGACAGTTCAAAGCCGGCGCATCCTGTTGGCTGTGCGGTGGGAGAAAGGAAATGTTGTGTGGGAACTGCAATGGGGCTGGCTTCATTGGAGGTTTCCTCAGCACTTATGACCAATAG

Protein sequence

MASSSFSASANCFSSRTTVSAIRGCSNQKLNLINNGFHDYSSPARFPHLNVKAAKNDRNTKPNSVICGDCDGNGAVLCSQCKGNGVNAVDFFNGQFKAGASCWLCGGRKEMLCGNCNGAGFIGGFLSTYDQ

Homology

[Close]

BLAST of HG10013585.1 vs. NCBI nr
Match: XP_038899028.1 (protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 266.2 bits (679), Expect = 1.5e-67
Identity = 125/131 (95.42%), Postives = 129/131 (98.47%), Query Frame = 0


Query: 1   MASSSFSASANCFSSRTTVSAIRGCSNQKLNLINNGFHDYSSPARFPHLNVKAAKNDRNT 60
           MASSSFSASANCFSS TT+SAIRG SNQKLNL+NNGF+DYSSPARFPHLN+KAAKNDRNT
Sbjct: 1   MASSSFSASANCFSSSTTISAIRGSSNQKLNLVNNGFYDYSSPARFPHLNIKAAKNDRNT 60

Query: 61  KPNSVICGDCDGNGAVLCSQCKGNGVNAVDFFNGQFKAGASCWLCGGRKEMLCGNCNGAG 120
           KPNSVICGDCDGNGAVLCSQCKGNGVNAVDFFNGQFKAGASCWLCGGRKEMLCGNCNGAG
Sbjct: 61  KPNSVICGDCDGNGAVLCSQCKGNGVNAVDFFNGQFKAGASCWLCGGRKEMLCGNCNGAG 120

Query: 121 FIGGFLSTYDQ 132
           FIGGFLSTYDQ
Sbjct: 121 FIGGFLSTYDQ 131

[Close]

BLAST of HG10013585.1 vs. NCBI nr
Match: KAA0038807.1 (chaperone protein DnaJ-like [Cucumis melo var. makuwa])

HSP 1 Score: 256.5 bits (654), Expect = 1.2e-64
Identity = 121/131 (92.37%), Postives = 125/131 (95.42%), Query Frame = 0


Query: 1   MASSSFSASANCFSSRTTVSAIRGCSNQKLNLINNGFHDYSSPARFPHLNVKAAKNDRNT 60
           MASSSFS SANCFSS TT+SAIR CSNQKLNLI+N FHDYSSPARFPHL +KAAKNDRNT
Sbjct: 1   MASSSFSLSANCFSSTTTLSAIRDCSNQKLNLIHNAFHDYSSPARFPHLILKAAKNDRNT 60

Query: 61  KPNSVICGDCDGNGAVLCSQCKGNGVNAVDFFNGQFKAGASCWLCGGRKEMLCGNCNGAG 120
           KPNSVICGDCDGNGAVLCSQCKGNGVNAVDFFNGQFKAG SCWLCGGRKEMLCGNCNGAG
Sbjct: 61  KPNSVICGDCDGNGAVLCSQCKGNGVNAVDFFNGQFKAGKSCWLCGGRKEMLCGNCNGAG 120

Query: 121 FIGGFLSTYDQ 132
           F+GGFLSTYDQ
Sbjct: 121 FVGGFLSTYDQ 131

[Close]

BLAST of HG10013585.1 vs. NCBI nr
Match: XP_008466412.1 (PREDICTED: chaperone protein DnaJ-like [Cucumis melo] >TYK31430.1 chaperone protein DnaJ-like [Cucumis melo var. makuwa])

HSP 1 Score: 255.0 bits (650), Expect = 3.5e-64
Identity = 120/131 (91.60%), Postives = 125/131 (95.42%), Query Frame = 0


Query: 1   MASSSFSASANCFSSRTTVSAIRGCSNQKLNLINNGFHDYSSPARFPHLNVKAAKNDRNT 60
           MASSSFS SANCFSS TT+SA+R CSNQKLNLI+NGFHDYSSPARFPHL +KAAKNDRNT
Sbjct: 1   MASSSFSLSANCFSSTTTLSALRDCSNQKLNLIHNGFHDYSSPARFPHLILKAAKNDRNT 60

Query: 61  KPNSVICGDCDGNGAVLCSQCKGNGVNAVDFFNGQFKAGASCWLCGGRKEMLCGNCNGAG 120
           KPNSVICGDCDGNGAVLCSQCKGNGVNAVDFFNGQFKAG SCWLCGGR EMLCGNCNGAG
Sbjct: 61  KPNSVICGDCDGNGAVLCSQCKGNGVNAVDFFNGQFKAGKSCWLCGGRIEMLCGNCNGAG 120

Query: 121 FIGGFLSTYDQ 132
           F+GGFLSTYDQ
Sbjct: 121 FVGGFLSTYDQ 131

[Close]

BLAST of HG10013585.1 vs. NCBI nr
Match: XP_004136477.1 (protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic isoform X2 [Cucumis sativus] >KGN60105.1 hypothetical protein Csa_001346 [Cucumis sativus])

HSP 1 Score: 251.1 bits (640), Expect = 5.1e-63
Identity = 121/132 (91.67%), Postives = 125/132 (94.70%), Query Frame = 0


Query: 1   MASSSFSASANCFSSRTTVSA-IRGCSNQKLNLINNGFHDYSSPARFPHLNVKAAKNDRN 60
           MASSSFS SANCFSS TT+SA IR CSNQKLNLI+NGFHDYSSPARFPHL +KAAKNDRN
Sbjct: 1   MASSSFSPSANCFSSTTTLSAIIRDCSNQKLNLIHNGFHDYSSPARFPHLILKAAKNDRN 60

Query: 61  TKPNSVICGDCDGNGAVLCSQCKGNGVNAVDFFNGQFKAGASCWLCGGRKEMLCGNCNGA 120
           TKPNSVICGDCDGNGAV+CSQCKG GVNAVDFFNGQFKAG SCWLCGGRKEMLCGNCNGA
Sbjct: 61  TKPNSVICGDCDGNGAVVCSQCKGKGVNAVDFFNGQFKAGESCWLCGGRKEMLCGNCNGA 120

Query: 121 GFIGGFLSTYDQ 132
           GFIGGFLSTYDQ
Sbjct: 121 GFIGGFLSTYDQ 132

[Close]

BLAST of HG10013585.1 vs. NCBI nr
Match: XP_022148277.1 (uncharacterized protein LOC111016947 [Momordica charantia])

HSP 1 Score: 223.8 bits (569), Expect = 8.8e-55
Identity = 109/131 (83.21%), Postives = 116/131 (88.55%), Query Frame = 0


Query: 1   MASSSFSASANCFSSRTTVSAIRGCSNQKLNLINNGFHDYSSPARFPHLNVKAAKNDRNT 60
           MA S+FSASA CF+S TTV AI GCSN KLNLI+NG H YS  ARFPHLN KAAKNDRNT
Sbjct: 1   MAFSAFSASAGCFNS-TTVKAIGGCSNHKLNLIDNGLH-YSPAARFPHLNGKAAKNDRNT 60

Query: 61  KPNSVICGDCDGNGAVLCSQCKGNGVNAVDFFNGQFKAGASCWLCGGRKEMLCGNCNGAG 120
           KPNS+ICGDCDGNGAVLCSQCKG+GVN  D FNGQFKAG SCWLCGG+K+MLCGNCNGAG
Sbjct: 61  KPNSMICGDCDGNGAVLCSQCKGSGVNPADVFNGQFKAGESCWLCGGKKDMLCGNCNGAG 120

Query: 121 FIGGFLSTYDQ 132
           FIGGFLSTYDQ
Sbjct: 121 FIGGFLSTYDQ 129

[Close]

BLAST of HG10013585.1 vs. ExPASy Swiss-Prot
Match: Q9SN73 (Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BSD2 PE=1 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 3.1e-31
Identity = 59/89 (66.29%), Postives = 72/89 (80.90%), Query Frame = 0


Query: 44  ARFPHLNVKAAKND-RNTKPNSVICGDCDGNGAVLCSQCKGNGVNAVDFFNGQFKAGASC 103
           +R     VKAA N+ + TKPNS++C +C+G G V CSQCKG GVN +D FNGQFKAGA C
Sbjct: 48  SRSQSFEVKAANNNPQGTKPNSLVCANCEGEGCVACSQCKGGGVNLIDHFNGQFKAGALC 107

Query: 104 WLCGGRKEMLCGNCNGAGFIGGFLSTYDQ 132
           WLC G+KE+LCG+CNGAGFIGGFLST+D+
Sbjct: 108 WLCRGKKEVLCGDCNGAGFIGGFLSTFDE 136

[Close]

BLAST of HG10013585.1 vs. ExPASy Swiss-Prot
Match: Q9XF14 (Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic OS=Zea mays OX=4577 GN=BSD2 PE=2 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 5.0e-29
Identity = 51/87 (58.62%), Postives = 74/87 (85.06%), Query Frame = 0


Query: 49  LNVKAAKNDRNTKPN----SVICGDCDGNGAVLCSQCKGNGVNAVDFFNGQFKAGASCWL 108
           +  KA +ND++ K +    S++C DC+GNGA++C++C+GNGVN+VD+F G+FKAG+ CWL
Sbjct: 40  IKTKATENDQSAKKHQKVKSILCQDCEGNGAIVCTKCEGNGVNSVDYFEGRFKAGSLCWL 99

Query: 109 CGGRKEMLCGNCNGAGFIGGFLSTYDQ 132
           C G++E+LCGNCNGAGF+GGFLST+D+
Sbjct: 100 CRGKREILCGNCNGAGFLGGFLSTFDE 126

[Close]

BLAST of HG10013585.1 vs. ExPASy TrEMBL
Match: A0A5A7TB44 (Chaperone protein DnaJ-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold92G003640 PE=4 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 5.9e-65
Identity = 121/131 (92.37%), Postives = 125/131 (95.42%), Query Frame = 0


Query: 1   MASSSFSASANCFSSRTTVSAIRGCSNQKLNLINNGFHDYSSPARFPHLNVKAAKNDRNT 60
           MASSSFS SANCFSS TT+SAIR CSNQKLNLI+N FHDYSSPARFPHL +KAAKNDRNT
Sbjct: 1   MASSSFSLSANCFSSTTTLSAIRDCSNQKLNLIHNAFHDYSSPARFPHLILKAAKNDRNT 60

Query: 61  KPNSVICGDCDGNGAVLCSQCKGNGVNAVDFFNGQFKAGASCWLCGGRKEMLCGNCNGAG 120
           KPNSVICGDCDGNGAVLCSQCKGNGVNAVDFFNGQFKAG SCWLCGGRKEMLCGNCNGAG
Sbjct: 61  KPNSVICGDCDGNGAVLCSQCKGNGVNAVDFFNGQFKAGKSCWLCGGRKEMLCGNCNGAG 120

Query: 121 FIGGFLSTYDQ 132
           F+GGFLSTYDQ
Sbjct: 121 FVGGFLSTYDQ 131

[Close]

BLAST of HG10013585.1 vs. ExPASy TrEMBL
Match: A0A5D3E725 (Chaperone protein DnaJ-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G007410 PE=4 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 1.7e-64
Identity = 120/131 (91.60%), Postives = 125/131 (95.42%), Query Frame = 0


Query: 1   MASSSFSASANCFSSRTTVSAIRGCSNQKLNLINNGFHDYSSPARFPHLNVKAAKNDRNT 60
           MASSSFS SANCFSS TT+SA+R CSNQKLNLI+NGFHDYSSPARFPHL +KAAKNDRNT
Sbjct: 1   MASSSFSLSANCFSSTTTLSALRDCSNQKLNLIHNGFHDYSSPARFPHLILKAAKNDRNT 60

Query: 61  KPNSVICGDCDGNGAVLCSQCKGNGVNAVDFFNGQFKAGASCWLCGGRKEMLCGNCNGAG 120
           KPNSVICGDCDGNGAVLCSQCKGNGVNAVDFFNGQFKAG SCWLCGGR EMLCGNCNGAG
Sbjct: 61  KPNSVICGDCDGNGAVLCSQCKGNGVNAVDFFNGQFKAGKSCWLCGGRIEMLCGNCNGAG 120

Query: 121 FIGGFLSTYDQ 132
           F+GGFLSTYDQ
Sbjct: 121 FVGGFLSTYDQ 131

[Close]

BLAST of HG10013585.1 vs. ExPASy TrEMBL
Match: A0A1S3CSH4 (chaperone protein DnaJ-like OS=Cucumis melo OX=3656 GN=LOC103503827 PE=4 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 1.7e-64
Identity = 120/131 (91.60%), Postives = 125/131 (95.42%), Query Frame = 0


Query: 1   MASSSFSASANCFSSRTTVSAIRGCSNQKLNLINNGFHDYSSPARFPHLNVKAAKNDRNT 60
           MASSSFS SANCFSS TT+SA+R CSNQKLNLI+NGFHDYSSPARFPHL +KAAKNDRNT
Sbjct: 1   MASSSFSLSANCFSSTTTLSALRDCSNQKLNLIHNGFHDYSSPARFPHLILKAAKNDRNT 60

Query: 61  KPNSVICGDCDGNGAVLCSQCKGNGVNAVDFFNGQFKAGASCWLCGGRKEMLCGNCNGAG 120
           KPNSVICGDCDGNGAVLCSQCKGNGVNAVDFFNGQFKAG SCWLCGGR EMLCGNCNGAG
Sbjct: 61  KPNSVICGDCDGNGAVLCSQCKGNGVNAVDFFNGQFKAGKSCWLCGGRIEMLCGNCNGAG 120

Query: 121 FIGGFLSTYDQ 132
           F+GGFLSTYDQ
Sbjct: 121 FVGGFLSTYDQ 131

[Close]

BLAST of HG10013585.1 vs. ExPASy TrEMBL
Match: A0A0A0LDP8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G878740 PE=4 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 2.5e-63
Identity = 121/132 (91.67%), Postives = 125/132 (94.70%), Query Frame = 0


Query: 1   MASSSFSASANCFSSRTTVSA-IRGCSNQKLNLINNGFHDYSSPARFPHLNVKAAKNDRN 60
           MASSSFS SANCFSS TT+SA IR CSNQKLNLI+NGFHDYSSPARFPHL +KAAKNDRN
Sbjct: 1   MASSSFSPSANCFSSTTTLSAIIRDCSNQKLNLIHNGFHDYSSPARFPHLILKAAKNDRN 60

Query: 61  TKPNSVICGDCDGNGAVLCSQCKGNGVNAVDFFNGQFKAGASCWLCGGRKEMLCGNCNGA 120
           TKPNSVICGDCDGNGAV+CSQCKG GVNAVDFFNGQFKAG SCWLCGGRKEMLCGNCNGA
Sbjct: 61  TKPNSVICGDCDGNGAVVCSQCKGKGVNAVDFFNGQFKAGESCWLCGGRKEMLCGNCNGA 120

Query: 121 GFIGGFLSTYDQ 132
           GFIGGFLSTYDQ
Sbjct: 121 GFIGGFLSTYDQ 132

[Close]

BLAST of HG10013585.1 vs. ExPASy TrEMBL
Match: A0A6J1D4M9 (uncharacterized protein LOC111016947 OS=Momordica charantia OX=3673 GN=LOC111016947 PE=4 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 4.2e-55
Identity = 109/131 (83.21%), Postives = 116/131 (88.55%), Query Frame = 0


Query: 1   MASSSFSASANCFSSRTTVSAIRGCSNQKLNLINNGFHDYSSPARFPHLNVKAAKNDRNT 60
           MA S+FSASA CF+S TTV AI GCSN KLNLI+NG H YS  ARFPHLN KAAKNDRNT
Sbjct: 1   MAFSAFSASAGCFNS-TTVKAIGGCSNHKLNLIDNGLH-YSPAARFPHLNGKAAKNDRNT 60

Query: 61  KPNSVICGDCDGNGAVLCSQCKGNGVNAVDFFNGQFKAGASCWLCGGRKEMLCGNCNGAG 120
           KPNS+ICGDCDGNGAVLCSQCKG+GVN  D FNGQFKAG SCWLCGG+K+MLCGNCNGAG
Sbjct: 61  KPNSMICGDCDGNGAVLCSQCKGSGVNPADVFNGQFKAGESCWLCGGKKDMLCGNCNGAG 120

Query: 121 FIGGFLSTYDQ 132
           FIGGFLSTYDQ
Sbjct: 121 FIGGFLSTYDQ 129

[Close]

BLAST of HG10013585.1 vs. TAIR 10
Match: AT3G47650.1 (DnaJ/Hsp40 cysteine-rich domain superfamily protein )

HSP 1 Score: 136.0 bits (341), Expect = 2.2e-32
Identity = 59/89 (66.29%), Postives = 72/89 (80.90%), Query Frame = 0


Query: 44  ARFPHLNVKAAKND-RNTKPNSVICGDCDGNGAVLCSQCKGNGVNAVDFFNGQFKAGASC 103
           +R     VKAA N+ + TKPNS++C +C+G G V CSQCKG GVN +D FNGQFKAGA C
Sbjct: 48  SRSQSFEVKAANNNPQGTKPNSLVCANCEGEGCVACSQCKGGGVNLIDHFNGQFKAGALC 107

Query: 104 WLCGGRKEMLCGNCNGAGFIGGFLSTYDQ 132
           WLC G+KE+LCG+CNGAGFIGGFLST+D+
Sbjct: 108 WLCRGKKEVLCGDCNGAGFIGGFLSTFDE 136

The following BLAST results are available for this feature:

BLAST of HG10013585.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038899028.1	1.5e-67	95.42	protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic-like [Benincasa hispida]	[more]
KAA0038807.1	1.2e-64	92.37	chaperone protein DnaJ-like [Cucumis melo var. makuwa]	[more]
XP_008466412.1	3.5e-64	91.60	PREDICTED: chaperone protein DnaJ-like [Cucumis melo] >TYK31430.1 chaperone prot...	[more]
XP_004136477.1	5.1e-63	91.67	protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic isoform X2 [Cucumis sativus] >K...	[more]
XP_022148277.1	8.8e-55	83.21	uncharacterized protein LOC111016947 [Momordica charantia]	[more]

BLAST of HG10013585.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SN73	3.1e-31	66.29	Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic OS=Arabidopsis thaliana OX=3702...	[more]
Q9XF14	5.0e-29	58.62	Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic OS=Zea mays OX=4577 GN=BSD2 PE=...	[more]

BLAST of HG10013585.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TB44	5.9e-65	92.37	Chaperone protein DnaJ-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf...	[more]
A0A5D3E725	1.7e-64	91.60	Chaperone protein DnaJ-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A1S3CSH4	1.7e-64	91.60	chaperone protein DnaJ-like OS=Cucumis melo OX=3656 GN=LOC103503827 PE=4 SV=1	[more]
A0A0A0LDP8	2.5e-63	91.67	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G878740 PE=4 SV=1	[more]
A0A6J1D4M9	4.2e-55	83.21	uncharacterized protein LOC111016947 OS=Momordica charantia OX=3673 GN=LOC111016...	[more]

BLAST of HG10013585.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G47650.1	2.2e-32	66.29	DnaJ/Hsp40 cysteine-rich domain superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR15852:SF51	PROTEIN BUNDLE SHEATH DEFECTIVE 2, CHLOROPLASTIC	coord: 2..125
None	No IPR available	PANTHER	PTHR15852	PLASTID TRANSCRIPTIONALLY ACTIVE PROTEIN	coord: 2..125
IPR036410	Heat shock protein DnaJ, cysteine-rich domain superfamily	SUPERFAMILY	57938	DnaJ/Hsp40 cysteine-rich domain	coord: 62..122

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
HG10013585	HG10013585	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
HG10013585.1-cds	HG10013585.1-cds-Chr02:2791885..2791945	CDS
HG10013585.1-cds	HG10013585.1-cds-Chr02:2792048..2792142	CDS
HG10013585.1-cds	HG10013585.1-cds-Chr02:2792296..2792359	CDS
HG10013585.1-cds	HG10013585.1-cds-Chr02:2792439..2792535	CDS
HG10013585.1-cds	HG10013585.1-cds-Chr02:2793225..2793303	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
HG10013585.1	HG10013585.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0061077	chaperone-mediated protein folding
cellular_component	GO:0101031	chaperone complex
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0016020	membrane
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0044183	protein folding chaperone