
HG10013585 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGTCTTCGTCTTTCTCGGCGTCGGCAAATTGCTTCAGTTCCAGAACTACAGTATCAGGTAACTCAAAATCATTTTCATTCTCGTAAAGATTTGCAGAAACATTTTTAGTGAACTACAAAAAACACTTGCAATTTATCAATCTTCTCACGAATTTCGCAGCAATTAGAGGTTGTAGTAATCAAAAGCTCAACCTAATTAACAATGGCTTCCATGATTATTCTTCCCCTGCTCGATTCCCTCATCTAAATGTCAAGGTTCTGCTTCTTCTCGATCGCCTTCTCCTGTTTGATTTTTGTTTGAAATGAAGCGATAATGTGTATATCATCTAAATTAGAGTCTGGAGAATGATTTGAAATGTTAAAATTAATGGAAATTGAAAATGTTTACTGTGTTTTCTGATCAATTAGGCTGCGAAGAATGATCGGAACACAAAACCTAATAGCGTGATTTGTGGCGATTGCGATGGAAATGGTGAGTTGATTTATGAGATTGGTATAGACGATTTAGGTTTTCCGAATGGCTGATGGTTTTGTAAAACTGAATGAAATAGGTGCTGTTCTTTGCTCACAATGCAAAGGAAATGGAGTTAATGCTGTTGATTTCTTCAATGGACAGTTCAAAGCCGGCGCATCCTGTTGGCTGTGCGGGTAATTTTGTTTTCTTCAATTATTTAATTGGAGTTTTTGTCAAATTGAAATTTGATTGACTTTTTCAAAATAAGTTTTTCTTACTTAGCAATAATTTTTTAAAAATTTTCTACACTTATTTCTTCTCGCTCCCTTTACATATGTATAGGTTGGGGGTTGCATATTGAAGATTTTTGTATGAAGGGCCTACATTTCACGTTCAAAATGTTGTTTGATCCAAAGTTTTAAAATAATGAAAAAACAATATTTTGTTGATGTCATGAACCACTTGTCGATGCTCTTTTGACGAGTGAGAGAGCAAAGAGAAGTGCGAACATGAGAGTGTGGGAGGAAGAGTCCTAGCCGTGTGAGAACATAATTGTATTAAATTAGTCGAGTGAGCACAAACGCTAAGAGGAAGGAGGAGTTGAGTGTAAGGGAGTGACACACGAAAAAAAGGTTATAAATCCTTAATTATTTTAAAAAAATTTGAGTCAAGTGACATTTACCATAAATTTAGATCATCCGTACAAAAGGAAAGTGAGAGAGAGAGGAGAGAAGGAGAGGAAGATAGAATAAAAAGAATATATATTTTTTTTAAAAGTTTGAAAATGATTAGAAACCTTTATTTTGAAAACGAGGTCAAATCTTATTTTATTCCAAATTTGAAATTTACTATGTGTTTGCTGATCAAAGGCTTTGTGTTGCAGTGGGAGAAAGGAAATGTTGTGTGGGAACTGCAATGGGGCTGGCTTCATTGGAGGTTTCCTCAGCACTTATGACCAATAG ATGGCGTCTTCGTCTTTCTCGGCGTCGGCAAATTGCTTCAGTTCCAGAACTACAGTATCAGCAATTAGAGGTTGTAGTAATCAAAAGCTCAACCTAATTAACAATGGCTTCCATGATTATTCTTCCCCTGCTCGATTCCCTCATCTAAATGTCAAGGCTGCGAAGAATGATCGGAACACAAAACCTAATAGCGTGATTTGTGGCGATTGCGATGGAAATGGTGCTGTTCTTTGCTCACAATGCAAAGGAAATGGAGTTAATGCTGTTGATTTCTTCAATGGACAGTTCAAAGCCGGCGCATCCTGTTGGCTGTGCGGTGGGAGAAAGGAAATGTTGTGTGGGAACTGCAATGGGGCTGGCTTCATTGGAGGTTTCCTCAGCACTTATGACCAATAG ATGGCGTCTTCGTCTTTCTCGGCGTCGGCAAATTGCTTCAGTTCCAGAACTACAGTATCAGCAATTAGAGGTTGTAGTAATCAAAAGCTCAACCTAATTAACAATGGCTTCCATGATTATTCTTCCCCTGCTCGATTCCCTCATCTAAATGTCAAGGCTGCGAAGAATGATCGGAACACAAAACCTAATAGCGTGATTTGTGGCGATTGCGATGGAAATGGTGCTGTTCTTTGCTCACAATGCAAAGGAAATGGAGTTAATGCTGTTGATTTCTTCAATGGACAGTTCAAAGCCGGCGCATCCTGTTGGCTGTGCGGTGGGAGAAAGGAAATGTTGTGTGGGAACTGCAATGGGGCTGGCTTCATTGGAGGTTTCCTCAGCACTTATGACCAATAG MASSSFSASANCFSSRTTVSAIRGCSNQKLNLINNGFHDYSSPARFPHLNVKAAKNDRNTKPNSVICGDCDGNGAVLCSQCKGNGVNAVDFFNGQFKAGASCWLCGGRKEMLCGNCNGAGFIGGFLSTYDQ Homology
BLAST of HG10013585 vs. NCBI nr
Match: XP_038899028.1 (protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic-like [Benincasa hispida]) HSP 1 Score: 266.2 bits (679), Expect = 1.5e-67 Identity = 125/131 (95.42%), Postives = 129/131 (98.47%), Query Frame = 0
BLAST of HG10013585 vs. NCBI nr
Match: KAA0038807.1 (chaperone protein DnaJ-like [Cucumis melo var. makuwa]) HSP 1 Score: 256.5 bits (654), Expect = 1.2e-64 Identity = 121/131 (92.37%), Postives = 125/131 (95.42%), Query Frame = 0
BLAST of HG10013585 vs. NCBI nr
Match: XP_008466412.1 (PREDICTED: chaperone protein DnaJ-like [Cucumis melo] >TYK31430.1 chaperone protein DnaJ-like [Cucumis melo var. makuwa]) HSP 1 Score: 255.0 bits (650), Expect = 3.5e-64 Identity = 120/131 (91.60%), Postives = 125/131 (95.42%), Query Frame = 0
BLAST of HG10013585 vs. NCBI nr
Match: XP_004136477.1 (protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic isoform X2 [Cucumis sativus] >KGN60105.1 hypothetical protein Csa_001346 [Cucumis sativus]) HSP 1 Score: 251.1 bits (640), Expect = 5.1e-63 Identity = 121/132 (91.67%), Postives = 125/132 (94.70%), Query Frame = 0
BLAST of HG10013585 vs. NCBI nr
Match: XP_022148277.1 (uncharacterized protein LOC111016947 [Momordica charantia]) HSP 1 Score: 223.8 bits (569), Expect = 8.8e-55 Identity = 109/131 (83.21%), Postives = 116/131 (88.55%), Query Frame = 0
BLAST of HG10013585 vs. ExPASy Swiss-Prot
Match: Q9SN73 (Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BSD2 PE=1 SV=1) HSP 1 Score: 136.0 bits (341), Expect = 3.1e-31 Identity = 59/89 (66.29%), Postives = 72/89 (80.90%), Query Frame = 0
BLAST of HG10013585 vs. ExPASy Swiss-Prot
Match: Q9XF14 (Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic OS=Zea mays OX=4577 GN=BSD2 PE=2 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 5.0e-29 Identity = 51/87 (58.62%), Postives = 74/87 (85.06%), Query Frame = 0
BLAST of HG10013585 vs. ExPASy TrEMBL
Match: A0A5A7TB44 (Chaperone protein DnaJ-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold92G003640 PE=4 SV=1) HSP 1 Score: 256.5 bits (654), Expect = 5.9e-65 Identity = 121/131 (92.37%), Postives = 125/131 (95.42%), Query Frame = 0
BLAST of HG10013585 vs. ExPASy TrEMBL
Match: A0A5D3E725 (Chaperone protein DnaJ-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G007410 PE=4 SV=1) HSP 1 Score: 255.0 bits (650), Expect = 1.7e-64 Identity = 120/131 (91.60%), Postives = 125/131 (95.42%), Query Frame = 0
BLAST of HG10013585 vs. ExPASy TrEMBL
Match: A0A1S3CSH4 (chaperone protein DnaJ-like OS=Cucumis melo OX=3656 GN=LOC103503827 PE=4 SV=1) HSP 1 Score: 255.0 bits (650), Expect = 1.7e-64 Identity = 120/131 (91.60%), Postives = 125/131 (95.42%), Query Frame = 0
BLAST of HG10013585 vs. ExPASy TrEMBL
Match: A0A0A0LDP8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G878740 PE=4 SV=1) HSP 1 Score: 251.1 bits (640), Expect = 2.5e-63 Identity = 121/132 (91.67%), Postives = 125/132 (94.70%), Query Frame = 0
BLAST of HG10013585 vs. ExPASy TrEMBL
Match: A0A6J1D4M9 (uncharacterized protein LOC111016947 OS=Momordica charantia OX=3673 GN=LOC111016947 PE=4 SV=1) HSP 1 Score: 223.8 bits (569), Expect = 4.2e-55 Identity = 109/131 (83.21%), Postives = 116/131 (88.55%), Query Frame = 0
BLAST of HG10013585 vs. TAIR 10
Match: AT3G47650.1 (DnaJ/Hsp40 cysteine-rich domain superfamily protein ) HSP 1 Score: 136.0 bits (341), Expect = 2.2e-32 Identity = 59/89 (66.29%), Postives = 72/89 (80.90%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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