HG10011927.1 (mRNA) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10011927.1
Type	mRNA
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	mediator of RNA polymerase II transcription subunit 33B-like isoform X1
Location	Chr01: 15477516 .. 15488146 (-)
Sequence length	2799
RNA-Seq Expression	HG10011927.1
Synteny	HG10011927.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGTTTCCACTCAACCGCCAGGTCAACTGCAGGGGATTGCTGGTTTATGGGACAGTGTGTTGGAGCTTACGAAGTCGGCACAGGACAAGAACTGCGATCCACTGCTTTGGGCGGTTCAGCTGAGCTCCACCCTTAGTTCGGCCGGCGTTTCCTTGCCGTCGGTCGAGCTCGCCCAGCTCTTGGTCTCTCATATTTGTTGGGACAATCACGTTCCGATCATGTGGAAATTTCTTGAGAAGGCAATGACCGCGAGAATCGTTCCTCCCCTGCTGGTTATTGTTCTTCTTTCTACCAGGTCTCATTTATTCTTTCAATTTGATTACTCTCACGCTTCCTCGAATTTCTATTTGAACCTTATTCAGAAGGTATCATATTGAGTGCTTCATTACGTTTTTGCCGGAGTCGTTCAGTAATACTTTGAATTTGCTAATGGTTCTTTATGTACCCGTGTGGACCATAATGAAACTAAGTTACGGAGCATGAAAAGAAAATGAAACTGAAGATATACGTATGGATTGCGACATTCATACGTCTTAATTCATGCATAGATTTCGTGCGTTGTTGCGTAATTGTCTTTCTGCTTGCATACATCCATAATTTTGTTGTGCTGTAGTTGTCTACTATTATAGTAAGTTCAAGTCTGTATCTGCTGCCCTTATACAACAATTTAATTTGCATCAGACACTTACGTGAGTTGGGAAGATGTCTGGAACTTATTAACATTTTATTTTTCTTCCTAATTGTTTATATTTTTGTTTTGTTTTGTTTTGTTTTTCTCATCTATTCAATGTCCAAAGTTGACATATATTGCATTTTTTTCTCTGATTTACTTCAGGGCAATTCCGTATAGAAAGCTTCGACCTGCAGCATACCGGCTTTACCTGGAACTTCTAAGCAGACATGTCTTTTCATTATCATCCCAAATCAATGGACCCAATTACCAAAGGTAGATTTGAGTGCATTTCGCTCGTGTGCATTATAGTGGTTAGCCTCATTCTCCCTTTCATTTTTCTTTCTTAATGGTAAACCTAGAGGCAAACTTTTGCCTTGAGAGGCATTCGGCTGTATAACTTTAAGCGAAGCAAAGAAGTTGTCAACCACTTCCACATAATGCACTGTCCCGGAGAGAGAGTTATCATGAGTATTGATACCCTCAAACAAGGAAGGAATTGCTAGATAGAATTCCTGTAACATCAAGCTCATCTCTGCAATCTTTTTAATTATCTTCCTTTTTGAAAGTTTTGAATTTTCAAATATTTTTTATTTTTTAAAATTATGCACTAAAAAATAATGGGAGAAATGCCTCAAACTTATTGCACCATGATTTGTTTCATCACCTACCCATCAGAGTTTTATTTTATGCAACTGGAGGAAAAAGATTCATGAATGATGTTATGCCATTTCAGGATCATGCAAACCATCGATGATGTCCTTCATCTGACCCAGATATTTGGTCTCCAAACATGTGATCCTGGGGTACTTATGGTTGAATTATTCTTTTCAATTGTATGGCAGCTGCTTGATGCATCATTGGATGATGAAGGATTGCTGGCACTTCCTGGAGAAGAAAGATCACCGTGGCTAATCAGGCCACAACCACATGATATGGAACTAGATGTTCATGATTCTTTTGGTGAGAAGAGAACTGAGAACAGTGAAAGTGTGCTTAAAGTAAACACTGCAAAGGCTATTGAGATAATTGGGCAGTTCCTGCAAAAAAAGAAAACTGCAAGGATTTTGTGCTTGGCCCATCGAAATATGTAAGAAGTATAGTTCTTGCAAACCTTGTTTACTTTCTCTTTGTCTCCTTTGATATCTGAAGGAAAGAAAAGCGTATAGATTTTAAGAAAGGCCGTATTTCATTGAGTCTACCACTACTCCACTGGTCGTTGGGATAATGTATACTGCTTTAATGTTAAATGTAGATTTGTGTATAGTATGGTTGCATTTGGAAGAAAATATTAGTCATTTTGACGCTTCAATGAAAACAATGTAACGTAATAATGCTTTCTGGTTTTTAGGCCATTACACTGGGCAGGTTTTGCCCAGCGGTTACAACTACTTGCAGCAAACTCAGTAGTTTTGAGGAACACAAAGCTAATAACTCCAGAGGTCCTTCTGCACTGGACATCTGATAAAAATAGGCTTCTATCACGAGAAGGAAAAACATCTCAGCTAGAGTTTCGTGATGTAATGGCTTCTGGATCACTATTTTCTTCTGCTGGTCAATCTCATGGCGTTAATTGGTCTGCATTGTGGCTTCCCATCGATTTGTTCCTGGAGGATGCCATGGATGGATCACAAGTTCTGGCAACTAGTGCTGTTGAGCGTCTGATATGTATGAGCTAACAAACTTTATATTGCTTGAGTGATTCTTTAACAATTCGCATAGTGTTTGAGAGTTTCTTCAATTAAATTGAAATTCTAAGTTTCTCCAAGGGTGAAGAGTTCTATTGATCCAGAGTTATCTGCAGGTTTGATAAAATCTTTGCGGGCAGTTAATGATACCTCCTGGCACAATACATTTTTGGGTTTGTGGATTGCAGCATTGCGACTTATTCAAAGGGTAGGATCATATAGCATCTTGATAAATGAATTATGTTTTGCTGTTCATTTCCTATTTATGTTCATATATTAATTTGTCTGAAATGATTTCACTCTCAATTTACTTAATTAGCAGGTCCACTGCCTTGAATGAGAGAACTTAACTGATTTCTGTTCTTTGATAATTGTGTGGTTGCTTTGTGTTGGCTAGTAAAGGTTATGCTATTTCACCTTTTCCTCCTATTTTTTTTCCTTCTCTTTTTTCTTCCTCCAAATGAAATCCGAGACTGGGGGAGATGGATAAAAATGGACAATTGAAGTTCAATCTTTTAAAAAGTTTGATGTACGTGGCAGTTTACTCCGTTTGTGATAAACAACTTAAAATACGGTCTCTTTTTGTTGAATTTGGAGAAACATACCTTGCAAGAATATTAAACGTTTTTCCCTCTTATACTTCTTTACTATTATTTGAGTATTTATTTATTATTTTAGGTAACAAAAAACCCATGTTTAATCTGCCACCATCTAGGAGGTATTTAACTCATTCCCACCTGCATATATTTGGTAATTCAAAATTTCCATTTCAGGAAAGGGATCCGAGTGAGGGTCCTGTACCTCGTTTGGATACATGCTTGTGCATGTTGTTGTCTATTACAACCCTTGCAGTCACCATTATTATTGAAGAAGAGGAAGGTGAACTAAAGGAGGAGGATGAATGCAGCCCAAGTAAAAGCAGAGATGAGAAACAGTCTTCAGGAAAGTGCCGCAAAGGTTTGATTATGAGCTTGCAGATGTTGGGTGAATATGAGAGCTTGCTGACTCCTCCACAATCCGTTATTGCAGTAGCCAATCAGGCTGCCACCAAAGCTGTAATGTTCATATCAGGGGTTGCTGTTGGTAATGAGTACTATGACTGTGTTAGTATCAACGATACACCTATTAATTGTTGTAAGTACTTATTCTTGTTTGAGAATTTAACATTGGTTGTGTGGATCCTATTAAACAGTAGCCTCTGAAAGATTTAAATTGATGAAATATTTTGATTCTCTTCAAACTGATAAACATAGTCAAATGAGCTATTCTGTATAGAAGAAAAGTTCTATCTCCTCTGCGGGAAAAAATGGGTGGTGAGGTGGAGGATTATTGTGAGGAAGTATGGACCTCAAGTGGTAGGTGCAAGGGTGTTTCTTACAAGAGCCCTTGGTCTACTATTGCTTTGGGATATCCTCTCTGGGAACAAAACCTTTGTGTTCCTTGTTCCCTCATCTTTACCACCGGTAGGAGAAGAGGTTACAAATGGTGGCCTTGGACGTGCCTTCCCTTGAAAGTTTTTTCTTCCCTATCTCTATGTTTTTGTTGTGCGCTTTCTCATTGTGAGGCTTGTGAGGTTGTCAGTCTACTCTCTATCATCTTTAACCAAGTTACGCGTTTAGGGAGAAAGGATTCTAGGAAGAGGCTTCCATCCAAAGCCCTTTGAGGGCTTTTCCAGTATTTTTTTTGTTTTGTTTTTTTCTGGATTTTTTGTGCCTCTTTTCCCTTTCCGAGGCCCCTTCGTTTTCCTCTCTTTGGAAAGTTAAAATTTATAAGAAAGTGAATTTTTCTGCTTGACAAGTTTTCATGGAGAGTGAATACTCAAGATCATATCCAGGGGCTTTCTTCCATGGTGTTGCATACTCAATAGTGTGTCCTGTAGGAAAGAGGAAGAGGATCTTGATCATTTACTTTGGAATTGTGTGTTTGTTACCTCCCTGTGAAAACAAGCTCTTTAGGATCTTTGAGATCGTGCTTGCTCGAAATAGAGGTTGTGATGTTTGTGGAGGTGCTCTTGAATCCTCCTTTTTGCAACACAGGAAAGGTTCTTTGGCAGTCTTAGTTTTTTGCTTTGTTATGGGGCATTTGGCTTGAGAGGAATAGTAGAATTTTTCATGGGTCGAGCAGTCTGGGAGGAACTTTGGGATGTGACTAGGTTTAACTCATTCTTGTAGGTGTCTTTTAATAGCCCTTTTTTTTTGTAATTATCAGCTTAGTTTTTTATTCTTTTGGATTGGAGCCCCTTTCTATATTTGATCATGAGGGGGCTTTTGTTTTTGGGGCTTGTTTTTTTGTATTGCCCTTGTATATTCTTTTTATCTTTCTCAATGAAAATTTAGTTTCTTTAAAAAAAAAAAAATAGACGTTCAATGTTTCAAGAATTCAAAACTATTATCAATGGCATTCTGCTTGAACACTTTATCTTCAATGAGTAGAACATTATTAAATATATACTCAAAACTATTTTATTCCGTCGTTTGAACTTTTGGTCCACTATAAACAATTTTTCTTTTATAAACAAATTGATCGTATCCTCAAAAGTATTTTATTCAATGGAAAAATTATTCTCGATATGACATAGGATTTTGGCGTGCAAATCTTCATATTATAGTGGTCTTTGTCATCCTTTACATGCATCTTAAATTTTAATTTTCACTCGTTCTTTTGATCCTAGAAGGATCCCTCTCTCACATATCGTTGCGTACATATGCATTCGAAATGTGTCATTTGTGTGGCTAATTTGTTGTTTTTTCTTATTGTAGCTGGAAATATGCGACATCTGATTGTTGAGGCTTGTATTTCTAGGAACCTTCTAGATACATCGGCATATTTTTGGCCAGGCTATGTAAATGCACGCAGTAATCAAGTGCCTCGTAGTGCATCTAGTCAGGTGGTTGGTTGGTCATCATTCATGAAAGGGTCGTCCTTAACTCCGTCGATGGTGAATGCTTTAGTGGCAGCCCCAGCTTCTAGGTATGCTCCCAGAGATATCTGTTTGTATCATGTGAGGCCATATTGAGGGAAGATGATTGGTTAAAGGGCCAAGTTTCCTAGGTTCTGTATATTAATTTTATTTCTCAAAAATGTGAGTACAGGTACCGCAACTATGTGGTGCAGATAAAGAAGCTGACAAATAGATTTGGAGAGGTTCTTGAAGTTATAAAAATTGGGAAGGTGATGCACACAAAGAGTCTAAAATTTCCTCAGAAGTTTATTAGCCTCAAAATGGTTTGCTGCCTTCATATTTATAGTAATGAAGGCAGTAAACTAACTTACAAAACAGTTAACTTGGCTGTAAAAACTAAAACTGTCTTAAAACAGAAACTAAAACAAAGAAGCAAAGGTAAACAGTTGGGAAATAGCAACCGAATACTAACTAAACAAAAGAAACAACTCAGCCAAGACCAAAGAAAATACAAGAACGGGCAAGAAAGGACAAGATTGGCTTACAAAAGCAAGAAAAGGCCAAGAACAATACAAATGGCCAACAGTGAGGTGTGTGGGAGGCAAAGAGTGTCACCTTTAAATAGTAAGCCATAAAAAATATGGAAGTCAGGGCATGGTAGGTGGTTAGTGCATTTATATCAAATGTCTTTGAAATCATCATCCAACTCATACAATTCAGGGAGAGAATTATAAGCAAATATTTCGCCCTCCGGAAGAGAGGAGGTTACCTTTGCGGCTTAAAGAGTCAGCTGCTGTATTTGTTTTTCCTGAGGTATGTTTAATAACAAAATCAAACCGTCGTAGAAATTGAAGCCACCTAGGATGCATTCTACTAATGTTTTTTTGAGATTGCAGAAATTTCAAAGAAAAGTGGTCAGTAAGCAATACAAGTTCTTTGTCAAGAAGATAACGTTCCCAAGTTTTTAGAGCCCTAACCAAAAAATAAAATTATTGTAGATAAGTGGGCCAAAGTTTTCTGGGAGGGCTGAGTTTTTCACTAAAAATTTCAATGGGTTGACCTTCTTGACATAAAACAGCCCCAGTACCCACACCCGAAGCATCAACCATATCTTCAAAAGGTTTTGGGAAATCATCGGGTAAGGCTAAAACAGGGATGGGAAACAAAAGGGTTTTTAAAGTATTAAAATTGTCATGTGTAGAATTATCCCAAAAAAATTACTCTTTTTTAAATGATTTGTTGTTGTTGTTCCTTTTCAATTCTCTATAAATAGAGGGATTGTCTTCTTGTTTTGATAACTTTTGATTAGTAATAAAGACTTTGATTTATTATGGGAGATTTCTCTCCTTTTATCTTTTAAGCTACATCAATAAGACTTGCTCTAAATTAAAATATCATCAAAATATACCACAACAAATTTATTAAGAAAAGGAAGTAGAACTTGGTACATAAGCTGCATAAAGGTACTACGAGCGTTGGAAAGACCAAATAGCATGACAAGCCATTCATAAAGCCCTTCAGTAGTTTTAATTTTAAAGGTTGTTTTCCTCACATCTCCGGACTTCATACGGATTTGATGATAACCACCTTTTAAATCAAAATTTTAGAAAAGATAGATGCCCCACCTAATTGGTCCAAAAGAGCACTAAAGTGAGGAATAGAAAACCAATACTTAATGGTTATCTTATTAATTGCTCTACTATCCACACAAAGTTCCAAGATCCATCCTTTTCAGGAGCTAGTAAAGTTGGGACAACACAAGGACTAAGGCTAGGTTGGATATAACCTCGGTGAAGCAATCCTTTAATTTGTTCATGTAATATTTGATATTCTTCAGGGCTCATTCTATAGCCAGGTCATATGATGGATTGGGTGAAAGATACGAAATGGCCAAGGTTTCATCTGGGTCGGGTTGGTCAGCCTTCAGGGTAGGAAAAATTGCAGGACACCCATCTCTTCTTTGCTAGAGCAACTGTAGTTGTAGGGCACGCTTGGAAGTTGAATCTATATGGAAGGAGTTTTTAAAGAGTATTTTCAGAGAGGTATCTTGAATCGTTCTATGGTGGTAACTTTTGTGTGCCTGATTTCAAAGAAGGAGGATGCTAGTAGGGTGAAGGAGTTTAGACCTATTAGTTTTATTACTAGTGTCTATAAGATTCTGGTTAAGGTCCTTGCAAATCGTCTTAGGAAAGTGCTTTTCTCGACTATTCCAGTGGCTTAAGGTGCTTTTGTAGCTGACAAGCAGATTCTTGACCAGGCTCTCATAGCCAATGATGCCATTGAGGATTATAGAGCTAATAAGAAGGAGGGTGTTATCTTCAAACTTGACTTTGAAAAGGCATATGACCACGAAGATTGGGACTTTTTGGATAAGGTGATGGAGAAGAAAGGCTTTGCGTACAAATGGAGAATGTGGATGTGGGGTTGTGTTAGAAATGTGAACTACTTTATTCTTATTAATGGAACCCCTAAGGGATCGATTAAGGCTTCTAGAGGCTTAAGCCAAGGGGAACCTCTATCCCCCTTCTTGTTTCTAATTGTTGTGGATGTCTTAAGTCACCTTATCTATAGGAGGTGGAGGGAAATATCACGGAGCCTTTTAGGGTTGGTTTTGAGGAGGTAGCCTTGTTTCACCTCCAGTTTACTGATGACAATGTTGTTCTGTTCTGGCAATGAGGACTCTTTTTTTATCGTTAACCATATGGTGGGGGTTTTTAAGGACATGTCTAGACTTAAAATTAATAGGCGTAAGTTCTAAATCTTGGGTATTAATTGTGATAAGGATAAGCTTAGAAGGTGGGCCAGTACGATTGGCTGCGAGGTTGGTCCTTTCCTTCCCGTAATCTTGGCCTCCCTTTGGGGGGTAACCTGAGGTCTTTGTCTTTTTGGGTTCCCATTTCTAAGAAGATTCGTAAAAGGCTAGCCTCTTGGAAGAAAGGATATTTTTCCAAGGCTGGTAGACTTACTCTAATCAGATCTGTGTTGAATGGTATTCTCGTTTATTGTTTGTCCCTGTTTAGGGCTCCCAGCTCTGTCTAAAAAAGCCTTGAGAAGTACATGAGAGACTTTTTGTGGGAAAGGGTGGATGAAGGTAAGAGTTCTCATCTGGTTAGGTGGGAGGTTATGGGGCGTCCTGTGAACCAAGGTGGGTTGGAGATTGGTAATTTAAGTCTTCGAAACAAAGTTCTGTTGGCTAGGTGGCTTTGGTGTTTTGCCCATGGCTACTAACTTTTTCAATTGTGTTTTCTCCACTCGAATCATTTCTATCTTCTTCAATTTCATTAACTACATGGGTCTCAACAAGATTTTACCCAAACTTATCTTCTAAATTTTCTATTTGAAAAGTTTTCAACCGTGATTCCTTTGTTTTGTTTTCTTTGGTATACAAAGTCAATCCATTTTTTATGATTCTTTAATTCTTTTCTTTCTTATGAACTTGAATTTTAAAGGGTTTCCCCCTAAATATATGTGGGTTGTTTGGCAACGAACACAACACTCAAAGCTCCCTCTTACTATTGGCGTCGCCAAGAGTTTCCCGGTCTTCCACCAGCGGTAGTCAACATTGGCCCAGACGGTTGCTCTGATACCAAAATTGATGTAGCCTAAGTAGCCTCAAGGAGTAATCTTGAAAGAATCAAGCTTGTGAATCTTTTATTAGAATGATAATGTGTTTCATACAAGATGGGGAAAACTCATATTTATAGAGTTTATTATAAATGGGGGTAAAAAGGGGAATCAACCTAGAATATTACCCAGTTAACCCCATTTTTCCTATATCAATTTTACTCAGTTGTATGAGTACGACAATTAAATTTAACTTTAGCTCATGGATTTGATGGAAGCTTGGCAGAGATTGAGAAGATCTATGAGATTGCAATAAATGGTTCAGGTGACGAGACGATATCTGCAGCTTCCATTTTGTGTGGGGCATCACTTGTTCGAGGTTGGAATCTACAGGTAAGTGACAGTTGATGCCTATGATTTGTATGTCACTGTATGGAGGTTCAACCCCCACCCCCCTCCTCCATCCCCTCTCATCTTAACATCTGGGATTAATGTAACCCATTTTCTTCAGGAACACACTGCTCTATTTATATCCAGATTGTTGTCACCACCAATTCCTGCAGATTTCTCTGGAAGTGATAGCTATTTGATCGACTATGCCCCATTTCTGAATGTTCTACTGGTTGGAATATCATCAGTTGATTGTGTGCAGATTTTTTCCTTGCATGGGATGGTAAGAATGTTAACTTGTCTGCCTATGTGACCCTACTGATAAGCTTCTGAATTTGAAGTTATGTTTTTATATAAGATTGTGTGCAAGCTTGTGAGAGGTTTTATATGTGAATTTATGCCCCATTAGTTGGCATTATGAGTCAAGTATGGGAGCTGAATTGTTGCAGAGAAGTTTTGGCAGGATTTGATGCCTGGCTTTTGATAGATGGGATTGAGGCTCATTGACTGAGAAAAAAATGCCTTATAAGAGCATCCAAACAATCATTTGATTGAACTTTTGTTTAATAATGTTTATCCTTTTTCAATGATTCTGAAAATATTTGATTTTTGACACGGAGAAGAACTTGATAGAGATGATTTAACAGACTAATTGAGAAACTCTGGTTTTCATTATGTTGTGAGCTTATTCCTTTTTTTTTCTTTTCTTTTCTTTTTGCTGTTTGAAGCCAGGTTCCTCTACTTGCAGGTCAATTAATGCCAATCTGCGAAGCTTTTGGATCGAGTCCCCCCAAGTCATGGATCCTTACATCTGGGGAAGAGCTTACTTGTCATGCAGTGTTCTCCTTGGCATTTACACTTCTATTGAGGTTGTGGCGGTTTCATCACCCACCTGTTGAAAATGTGAAGGGTGATGCACGACCTGTGGGATCTCAACTAACTCCTGAATATCTACTATTGGTTCGGAATTCTCAGTTAGCATCTTTTGGAAAGTCGCCCAAGGATCGACTTAAAGCGAGACGACTGTCAAAATTATTGAAATTTTCTTTAGAACCTATATTCATGGATTCCTTTCCAAAATTGAAAGGCTGGTACCGGCAACATCAAGAATGCATTGCTTCCATTCTCTCTGGTCTTGTACCAGGGGCCCCAGTTCATCAAATTGTTGATGCTCTCTTGACTATGATGTTCAGGAAGATAAATCGTGGTGGTCAATCTTTAACTTCAACAACTTCAGGAAGCAGCAACTCGTCTGGATCTGCAAATGAAGAGGCCTCGATTAAGCTTAAAGTGCCTGCATGGGACATACTTGAAGCAACTCCCTTCGTTCTTGATGCCGCTCTTACTGCCTGTGCTCATGGACGATTGTCCCCCCGTGATTTGGCTACAGGCAAGTTCAAAACATTCTTTTAA

mRNA sequence

ATGGCGGTTTCCACTCAACCGCCAGGTCAACTGCAGGGGATTGCTGGTTTATGGGACAGTGTGTTGGAGCTTACGAAGTCGGCACAGGACAAGAACTGCGATCCACTGCTTTGGGCGGTTCAGCTGAGCTCCACCCTTAGTTCGGCCGGCGTTTCCTTGCCGTCGGTCGAGCTCGCCCAGCTCTTGGTCTCTCATATTTGTTGGGACAATCACGTTCCGATCATGTGGAAATTTCTTGAGAAGGCAATGACCGCGAGAATCGTTCCTCCCCTGCTGGTTATTGTTCTTCTTTCTACCAGGGCAATTCCGTATAGAAAGCTTCGACCTGCAGCATACCGGCTTTACCTGGAACTTCTAAGCAGACATGTCTTTTCATTATCATCCCAAATCAATGGACCCAATTACCAAAGGATCATGCAAACCATCGATGATGTCCTTCATCTGACCCAGATATTTGGTCTCCAAACATGTGATCCTGGGGTACTTATGGTTGAATTATTCTTTTCAATTGTATGGCAGCTGCTTGATGCATCATTGGATGATGAAGGATTGCTGGCACTTCCTGGAGAAGAAAGATCACCGTGGCTAATCAGGCCACAACCACATGATATGGAACTAGATGTTCATGATTCTTTTGGTGAGAAGAGAACTGAGAACAGTGAAAGTGTGCTTAAAGTAAACACTGCAAAGGCTATTGAGATAATTGGGCAGTTCCTGCAAAAAAAGAAAACTGCAAGGATTTTGTGCTTGGCCCATCGAAATATGCCATTACACTGGGCAGGTTTTGCCCAGCGGTTACAACTACTTGCAGCAAACTCAGTAGTTTTGAGGAACACAAAGCTAATAACTCCAGAGGTCCTTCTGCACTGGACATCTGATAAAAATAGGCTTCTATCACGAGAAGGAAAAACATCTCAGCTAGAGTTTCGTGATGTAATGGCTTCTGGATCACTATTTTCTTCTGCTGGTCAATCTCATGGCGTTAATTGGTCTGCATTGTGGCTTCCCATCGATTTGTTCCTGGAGGATGCCATGGATGGATCACAAGTTCTGGCAACTAGTGCTGTTGAGCGTCTGATATTCACCATTATTATTGAAGAAGAGGAAGGTGAACTAAAGGAGGAGGATGAATGCAGCCCAAGTAAAAGCAGAGATGAGAAACAGTCTTCAGGAAAGTGCCGCAAAGGTTTGATTATGAGCTTGCAGATGTTGGGTGAATATGAGAGCTTGCTGACTCCTCCACAATCCGTTATTGCAGTAGCCAATCAGGCTGCCACCAAAGCTGTAATGTTCATATCAGGGGTTGCTGTTGGTAATGAGTACTATGACTGTGTTAGTATCAACGATACACCTATTAATTGTTCTGGAAATATGCGACATCTGATTGTTGAGGCTTGTATTTCTAGGAACCTTCTAGATACATCGGCATATTTTTGGCCAGGCTATGTAAATGCACGCAGTAATCAAGTGCCTCGTAGTGCATCTAGTCAGGTGGTTGGTTGGTCATCATTCATGAAAGGGTCGTCCTTAACTCCGTCGATGGTGAATGCTTTAGTGGCAGCCCCAGCTTCTAGGTACCGCAACTATGTGGTGCAGATAAAGAAGCTGACAAATAGATTTGGAGAGGTTCTTGAAGTTATAAAAATTGGGAAGGTGATGCACACAAAGAGTCTAAAATTTCCTCAGAAGTTTATTAGCCTCAAAATGGTTTGCTGCCTTCATATTTATAGTAATGAAGGCAGTAAACTAACTTACAAAACAGTTAACTTGGCTGTAAAAACTAAAACTGTCTTAAAACAGAAACTAAAACAAAGAAGCAAAGCTCATGGATTTGATGGAAGCTTGGCAGAGATTGAGAAGATCTATGAGATTGCAATAAATGGTTCAGGTGACGAGACGATATCTGCAGCTTCCATTTTGTGTGGGGCATCACTTGTTCGAGGTTGGAATCTACAGGAACACACTGCTCTATTTATATCCAGATTGTTGTCACCACCAATTCCTGCAGATTTCTCTGGAAGTGATAGCTATTTGATCGACTATGCCCCATTTCTGAATGTTCTACTGGTTGGAATATCATCAGTTGATTGTGTGCAGATTTTTTCCTTGCATGGGATGGTTCCTCTACTTGCAGGTCAATTAATGCCAATCTGCGAAGCTTTTGGATCGAGTCCCCCCAAGTCATGGATCCTTACATCTGGGGAAGAGCTTACTTGTCATGCAGTGTTCTCCTTGGCATTTACACTTCTATTGAGGTTGTGGCGGTTTCATCACCCACCTGTTGAAAATGTGAAGGGTGATGCACGACCTGTGGGATCTCAACTAACTCCTGAATATCTACTATTGGTTCGGAATTCTCAGTTAGCATCTTTTGGAAAGTCGCCCAAGGATCGACTTAAAGCGAGACGACTGTCAAAATTATTGAAATTTTCTTTAGAACCTATATTCATGGATTCCTTTCCAAAATTGAAAGGCTGGTACCGGCAACATCAAGAATGCATTGCTTCCATTCTCTCTGGTCTTGTACCAGGGGCCCCAGTTCATCAAATTGTTGATGCTCTCTTGACTATGATGTTCAGGAAGATAAATCGTGGTGGTCAATCTTTAACTTCAACAACTTCAGGAAGCAGCAACTCGTCTGGATCTGCAAATGAAGAGGCCTCGATTAAGCTTAAAGTGCCTGCATGGGACATACTTGAAGCAACTCCCTTCGTTCTTGATGCCGCTCTTACTGCCTGTGCTCATGGACGATTGTCCCCCCGTGATTTGGCTACAGGCAAGTTCAAAACATTCTTTTAA

Coding sequence (CDS)

ATGGCGGTTTCCACTCAACCGCCAGGTCAACTGCAGGGGATTGCTGGTTTATGGGACAGTGTGTTGGAGCTTACGAAGTCGGCACAGGACAAGAACTGCGATCCACTGCTTTGGGCGGTTCAGCTGAGCTCCACCCTTAGTTCGGCCGGCGTTTCCTTGCCGTCGGTCGAGCTCGCCCAGCTCTTGGTCTCTCATATTTGTTGGGACAATCACGTTCCGATCATGTGGAAATTTCTTGAGAAGGCAATGACCGCGAGAATCGTTCCTCCCCTGCTGGTTATTGTTCTTCTTTCTACCAGGGCAATTCCGTATAGAAAGCTTCGACCTGCAGCATACCGGCTTTACCTGGAACTTCTAAGCAGACATGTCTTTTCATTATCATCCCAAATCAATGGACCCAATTACCAAAGGATCATGCAAACCATCGATGATGTCCTTCATCTGACCCAGATATTTGGTCTCCAAACATGTGATCCTGGGGTACTTATGGTTGAATTATTCTTTTCAATTGTATGGCAGCTGCTTGATGCATCATTGGATGATGAAGGATTGCTGGCACTTCCTGGAGAAGAAAGATCACCGTGGCTAATCAGGCCACAACCACATGATATGGAACTAGATGTTCATGATTCTTTTGGTGAGAAGAGAACTGAGAACAGTGAAAGTGTGCTTAAAGTAAACACTGCAAAGGCTATTGAGATAATTGGGCAGTTCCTGCAAAAAAAGAAAACTGCAAGGATTTTGTGCTTGGCCCATCGAAATATGCCATTACACTGGGCAGGTTTTGCCCAGCGGTTACAACTACTTGCAGCAAACTCAGTAGTTTTGAGGAACACAAAGCTAATAACTCCAGAGGTCCTTCTGCACTGGACATCTGATAAAAATAGGCTTCTATCACGAGAAGGAAAAACATCTCAGCTAGAGTTTCGTGATGTAATGGCTTCTGGATCACTATTTTCTTCTGCTGGTCAATCTCATGGCGTTAATTGGTCTGCATTGTGGCTTCCCATCGATTTGTTCCTGGAGGATGCCATGGATGGATCACAAGTTCTGGCAACTAGTGCTGTTGAGCGTCTGATATTCACCATTATTATTGAAGAAGAGGAAGGTGAACTAAAGGAGGAGGATGAATGCAGCCCAAGTAAAAGCAGAGATGAGAAACAGTCTTCAGGAAAGTGCCGCAAAGGTTTGATTATGAGCTTGCAGATGTTGGGTGAATATGAGAGCTTGCTGACTCCTCCACAATCCGTTATTGCAGTAGCCAATCAGGCTGCCACCAAAGCTGTAATGTTCATATCAGGGGTTGCTGTTGGTAATGAGTACTATGACTGTGTTAGTATCAACGATACACCTATTAATTGTTCTGGAAATATGCGACATCTGATTGTTGAGGCTTGTATTTCTAGGAACCTTCTAGATACATCGGCATATTTTTGGCCAGGCTATGTAAATGCACGCAGTAATCAAGTGCCTCGTAGTGCATCTAGTCAGGTGGTTGGTTGGTCATCATTCATGAAAGGGTCGTCCTTAACTCCGTCGATGGTGAATGCTTTAGTGGCAGCCCCAGCTTCTAGGTACCGCAACTATGTGGTGCAGATAAAGAAGCTGACAAATAGATTTGGAGAGGTTCTTGAAGTTATAAAAATTGGGAAGGTGATGCACACAAAGAGTCTAAAATTTCCTCAGAAGTTTATTAGCCTCAAAATGGTTTGCTGCCTTCATATTTATAGTAATGAAGGCAGTAAACTAACTTACAAAACAGTTAACTTGGCTGTAAAAACTAAAACTGTCTTAAAACAGAAACTAAAACAAAGAAGCAAAGCTCATGGATTTGATGGAAGCTTGGCAGAGATTGAGAAGATCTATGAGATTGCAATAAATGGTTCAGGTGACGAGACGATATCTGCAGCTTCCATTTTGTGTGGGGCATCACTTGTTCGAGGTTGGAATCTACAGGAACACACTGCTCTATTTATATCCAGATTGTTGTCACCACCAATTCCTGCAGATTTCTCTGGAAGTGATAGCTATTTGATCGACTATGCCCCATTTCTGAATGTTCTACTGGTTGGAATATCATCAGTTGATTGTGTGCAGATTTTTTCCTTGCATGGGATGGTTCCTCTACTTGCAGGTCAATTAATGCCAATCTGCGAAGCTTTTGGATCGAGTCCCCCCAAGTCATGGATCCTTACATCTGGGGAAGAGCTTACTTGTCATGCAGTGTTCTCCTTGGCATTTACACTTCTATTGAGGTTGTGGCGGTTTCATCACCCACCTGTTGAAAATGTGAAGGGTGATGCACGACCTGTGGGATCTCAACTAACTCCTGAATATCTACTATTGGTTCGGAATTCTCAGTTAGCATCTTTTGGAAAGTCGCCCAAGGATCGACTTAAAGCGAGACGACTGTCAAAATTATTGAAATTTTCTTTAGAACCTATATTCATGGATTCCTTTCCAAAATTGAAAGGCTGGTACCGGCAACATCAAGAATGCATTGCTTCCATTCTCTCTGGTCTTGTACCAGGGGCCCCAGTTCATCAAATTGTTGATGCTCTCTTGACTATGATGTTCAGGAAGATAAATCGTGGTGGTCAATCTTTAACTTCAACAACTTCAGGAAGCAGCAACTCGTCTGGATCTGCAAATGAAGAGGCCTCGATTAAGCTTAAAGTGCCTGCATGGGACATACTTGAAGCAACTCCCTTCGTTCTTGATGCCGCTCTTACTGCCTGTGCTCATGGACGATTGTCCCCCCGTGATTTGGCTACAGGCAAGTTCAAAACATTCTTTTAA

Protein sequence

MAVSTQPPGQLQGIAGLWDSVLELTKSAQDKNCDPLLWAVQLSSTLSSAGVSLPSVELAQLLVSHICWDNHVPIMWKFLEKAMTARIVPPLLVIVLLSTRAIPYRKLRPAAYRLYLELLSRHVFSLSSQINGPNYQRIMQTIDDVLHLTQIFGLQTCDPGVLMVELFFSIVWQLLDASLDDEGLLALPGEERSPWLIRPQPHDMELDVHDSFGEKRTENSESVLKVNTAKAIEIIGQFLQKKKTARILCLAHRNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLHWTSDKNRLLSREGKTSQLEFRDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLIFTIIIEEEEGELKEEDECSPSKSRDEKQSSGKCRKGLIMSLQMLGEYESLLTPPQSVIAVANQAATKAVMFISGVAVGNEYYDCVSINDTPINCSGNMRHLIVEACISRNLLDTSAYFWPGYVNARSNQVPRSASSQVVGWSSFMKGSSLTPSMVNALVAAPASRYRNYVVQIKKLTNRFGEVLEVIKIGKVMHTKSLKFPQKFISLKMVCCLHIYSNEGSKLTYKTVNLAVKTKTVLKQKLKQRSKAHGFDGSLAEIEKIYEIAINGSGDETISAASILCGASLVRGWNLQEHTALFISRLLSPPIPADFSGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFGSSPPKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDARPVGSQLTPEYLLLVRNSQLASFGKSPKDRLKARRLSKLLKFSLEPIFMDSFPKLKGWYRQHQECIASILSGLVPGAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSANEEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPRDLATGKFKTFF

Homology

[Close]

BLAST of HG10011927.1 vs. NCBI nr
Match: XP_038887593.1 (mediator of RNA polymerase II transcription subunit 33B isoform X1 [Benincasa hispida])

HSP 1 Score: 1501.1 bits (3885), Expect = 0.0e+00
Identity = 795/983 (80.87%), Postives = 816/983 (83.01%), Query Frame = 0


Query: 1   MAVSTQPPGQLQGIAGLWDSVLELTKSAQDKNCDPLLWAVQLSSTLSSAGVSLPSVELAQ 60
           MAVSTQPPGQLQ I+GLWDSVLELTKSAQDKNCDPLLWAVQLSSTL+SAGVSLPSVELAQ
Sbjct: 1   MAVSTQPPGQLQEISGLWDSVLELTKSAQDKNCDPLLWAVQLSSTLNSAGVSLPSVELAQ 60

Query: 61  LLVSHICWDNHVPIMWKFLEKAMTARIVPPLLVIVLLSTRAIPYRKLRPAAYRLYLELLS 120
           LLVSHICWDNHVPIMWKFLEKAMTARIVPPLLVI LLSTRAIPYRKLRPAAYRLYLE+LS
Sbjct: 61  LLVSHICWDNHVPIMWKFLEKAMTARIVPPLLVIALLSTRAIPYRKLRPAAYRLYLEVLS 120

Query: 121 RHVFSLSSQINGPNYQRIMQTIDDVLHLTQIFGLQTCDPGVLMVELFFSIVWQLLDASLD 180
           RH+FSL+SQINGPNYQRIMQTIDDVLHLTQIFG+QTC+PGVLMVELFFSIVWQLLDASLD
Sbjct: 121 RHIFSLTSQINGPNYQRIMQTIDDVLHLTQIFGVQTCEPGVLMVELFFSIVWQLLDASLD 180

Query: 181 DEGLLALPGEERSPWLIRPQPHDMELDVHDSFGEKRTENSESVLKVNTAKAIEIIGQFLQ 240
           DEGLLALPGEE+S WLIRPQ HDMELDVHDSFGEKRTENSES+LKVNTAKAIEIIGQFLQ
Sbjct: 181 DEGLLALPGEEKSVWLIRPQLHDMELDVHDSFGEKRTENSESLLKVNTAKAIEIIGQFLQ 240

Query: 241 KKKTARILCLAHRNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLHWTSDKNRLLSR 300
            KKTARILCLA RNMPLHWAGFAQRL+LLAANSVVLRNTKLITPEVLLHWTSDK++LLS+
Sbjct: 241 NKKTARILCLALRNMPLHWAGFAQRLKLLAANSVVLRNTKLITPEVLLHWTSDKSKLLSQ 300

Query: 301 EGKTSQLEFRDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLI 360
           EGKT QLEFRDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLI
Sbjct: 301 EGKTCQLEFRDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLI 360

Query: 361 ---------------------------------------------------------FTI 420
                                                                     TI
Sbjct: 361 CLIKSLRAVNDSSWHNTFLGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSISTLAVTI 420

Query: 421 IIEEEEGELKEEDECSPSKSRDEKQSSGKCRKGLIMSLQMLGEYESLLTPPQSVIAVANQ 480
           IIEEEEGE+K EDECS SKSRDEKQSSG CRKGLI SLQMLGEYESLL PPQSVIAVANQ
Sbjct: 421 IIEEEEGEVK-EDECSASKSRDEKQSSGMCRKGLITSLQMLGEYESLLIPPQSVIAVANQ 480

Query: 481 AATKAVMFISGVAVGNEYYDCVSINDTPINCSGNMRHLIVEACISRNLLDTSAYFWPGYV 540
           AA KAVMFISGVAVGNEY+DCVS++DTPINCSGNMRHLIVEACISRNLLDTSAYFWPGY 
Sbjct: 481 AAAKAVMFISGVAVGNEYHDCVSMSDTPINCSGNMRHLIVEACISRNLLDTSAYFWPGYA 540

Query: 541 NARSNQVPRSASSQVVGWSSFMKGSSLTPSMVNALVAAPASRYRNYVVQIKKLTNRFGEV 600
           NARS+QVPRSASSQVVGWSSFMKGSSLTPSMVNALVA PAS                   
Sbjct: 541 NARSSQVPRSASSQVVGWSSFMKGSSLTPSMVNALVATPAS------------------- 600

Query: 601 LEVIKIGKVMHTKSLKFPQKFISLKMVCCLHIYSNEGSKLTYKTVNLAVKTKTVLKQKLK 660
                                                                       
Sbjct: 601 ------------------------------------------------------------ 660

Query: 661 QRSKAHGFDGSLAEIEKIYEIAINGSGDETISAASILCGASLVRGWNLQEHTALFISRLL 720
                     SLAEIEKIYEIAINGSGDE ISAASILCGASLVRGWNLQEHTALFISRLL
Sbjct: 661 ----------SLAEIEKIYEIAINGSGDEKISAASILCGASLVRGWNLQEHTALFISRLL 720

Query: 721 SPPIPADFSGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFGS 780
           SPPIP D+SGS+SYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFGS
Sbjct: 721 SPPIPTDYSGSESYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFGS 780

Query: 781 SPPKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDARPVGSQLTPEYLLLV 840
             PKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDARPVGSQLTPEYLLLV
Sbjct: 781 CSPKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDARPVGSQLTPEYLLLV 840

Query: 841 RNSQLASFGKSPKDRLKARRLSKLLKFSLEPIFMDSFPKLKGWYRQHQECIASILSGLVP 900
           RNSQLASFGKSPKDRLKARRLSKLLKFSLEPIFMDSFPKLKGWYRQHQECIASILSGL+P
Sbjct: 841 RNSQLASFGKSPKDRLKARRLSKLLKFSLEPIFMDSFPKLKGWYRQHQECIASILSGLIP 893

Query: 901 GAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSANEEASIKLKVPAWDILEATP 927
           GAPVHQIVDALLTMMFRKINR GQSLTSTTSGSSNSSGSANEEASIKLKVPAWDILEATP
Sbjct: 901 GAPVHQIVDALLTMMFRKINRAGQSLTSTTSGSSNSSGSANEEASIKLKVPAWDILEATP 893

[Close]

BLAST of HG10011927.1 vs. NCBI nr
Match: XP_008449381.1 (PREDICTED: mediator of RNA polymerase II transcription subunit 33B-like isoform X1 [Cucumis melo])

HSP 1 Score: 1483.4 bits (3839), Expect = 0.0e+00
Identity = 787/983 (80.06%), Postives = 807/983 (82.10%), Query Frame = 0


Query: 1   MAVSTQPPGQLQGIAGLWDSVLELTKSAQDKNCDPLLWAVQLSSTLSSAGVSLPSVELAQ 60
           MAVS QPPGQLQGIAGLWD+VLE+TKSAQDKNCDPLLWAVQLSSTL+SAGVSLPSVELAQ
Sbjct: 1   MAVSAQPPGQLQGIAGLWDTVLEVTKSAQDKNCDPLLWAVQLSSTLNSAGVSLPSVELAQ 60

Query: 61  LLVSHICWDNHVPIMWKFLEKAMTARIVPPLLVIVLLSTRAIPYRKLRPAAYRLYLELLS 120
           LLVSHICWDNHVPIMWKFLEKAMTARIVPPLLVI LLSTRAIPYRKL+PAAYRLYLELLS
Sbjct: 61  LLVSHICWDNHVPIMWKFLEKAMTARIVPPLLVIALLSTRAIPYRKLQPAAYRLYLELLS 120

Query: 121 RHVFSLSSQINGPNYQRIMQTIDDVLHLTQIFGLQTCDPGVLMVELFFSIVWQLLDASLD 180
           RHVFS +SQI GPNYQRIMQTIDDVLHLTQIFGLQTC+PGVLMVELFFSIVWQLLDASLD
Sbjct: 121 RHVFSSTSQIYGPNYQRIMQTIDDVLHLTQIFGLQTCEPGVLMVELFFSIVWQLLDASLD 180

Query: 181 DEGLLALPGEERSPWLIRPQPHDMELDVHDSFGEKRTENSESVLKVNTAKAIEIIGQFLQ 240
           DEGLLALPGEE+S WLIRPQ HDMELDVHDSFGEK+TENSES+LKVNTAKAIEIIGQFLQ
Sbjct: 181 DEGLLALPGEEKSAWLIRPQLHDMELDVHDSFGEKKTENSESLLKVNTAKAIEIIGQFLQ 240

Query: 241 KKKTARILCLAHRNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLHWTSDKNRLLSR 300
            KKT RILCLA RNMPL WAGFAQRLQLL ANSVVL N KLITPEVLLHWTSDKN+LLS+
Sbjct: 241 NKKTERILCLALRNMPLQWAGFAQRLQLLGANSVVLGNAKLITPEVLLHWTSDKNKLLSQ 300

Query: 301 EGKTSQLEFRDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLI 360
           +GKTSQLEFRDVM+SGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLI
Sbjct: 301 KGKTSQLEFRDVMSSGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLI 360

Query: 361 ---------------------------------------------------------FTI 420
                                                                     TI
Sbjct: 361 CLIKSLRAVNDTSWHNTFLGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSISTLAVTI 420

Query: 421 IIEEEEGELKEEDECSPSKSRDEKQSSGKCRKGLIMSLQMLGEYESLLTPPQSVIAVANQ 480
           IIEEEE E K ED+CSPSKSRDEKQSSG CRKGLI SLQMLGEYESLLTPPQS+IAVANQ
Sbjct: 421 IIEEEEVEPK-EDDCSPSKSRDEKQSSGMCRKGLITSLQMLGEYESLLTPPQSIIAVANQ 480

Query: 481 AATKAVMFISGVAVGNEYYDCVSINDTPINCSGNMRHLIVEACISRNLLDTSAYFWPGYV 540
           AA KAVMFISGVAVGNEYYDC S+ND PINCSGNMRHLIVEACISRNLLDTSAYFWPGYV
Sbjct: 481 AAAKAVMFISGVAVGNEYYDCASMNDAPINCSGNMRHLIVEACISRNLLDTSAYFWPGYV 540

Query: 541 NARSNQVPRSASSQVVGWSSFMKGSSLTPSMVNALVAAPASRYRNYVVQIKKLTNRFGEV 600
           NA S+QVPRSAS+QVVGWSSFMKGS LTPSMVNALVA PAS                   
Sbjct: 541 NALSSQVPRSASNQVVGWSSFMKGSPLTPSMVNALVATPAS------------------- 600

Query: 601 LEVIKIGKVMHTKSLKFPQKFISLKMVCCLHIYSNEGSKLTYKTVNLAVKTKTVLKQKLK 660
                                                                       
Sbjct: 601 ------------------------------------------------------------ 660

Query: 661 QRSKAHGFDGSLAEIEKIYEIAINGSGDETISAASILCGASLVRGWNLQEHTALFISRLL 720
                     SLAEIEKIYEIAINGSGDE ISAASILCGASLVRGW LQEHTALFISRLL
Sbjct: 661 ----------SLAEIEKIYEIAINGSGDEKISAASILCGASLVRGWYLQEHTALFISRLL 720

Query: 721 SPPIPADFSGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFGS 780
            PPIP D+SGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFGS
Sbjct: 721 LPPIPTDYSGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFGS 780

Query: 781 SPPKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDARPVGSQLTPEYLLLV 840
           SPPKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDARPVGSQLTPEYLLLV
Sbjct: 781 SPPKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDARPVGSQLTPEYLLLV 840

Query: 841 RNSQLASFGKSPKDRLKARRLSKLLKFSLEPIFMDSFPKLKGWYRQHQECIASILSGLVP 900
           RNSQLASFGKSP DRLKARRLSKLLKFSL+PIFMDSFPKLKGWYRQHQECIASILSGLVP
Sbjct: 841 RNSQLASFGKSPNDRLKARRLSKLLKFSLQPIFMDSFPKLKGWYRQHQECIASILSGLVP 893

Query: 901 GAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSANEEASIKLKVPAWDILEATP 927
           GAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSANEEASIKLKVPAWDILEATP
Sbjct: 901 GAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSANEEASIKLKVPAWDILEATP 893

[Close]

BLAST of HG10011927.1 vs. NCBI nr
Match: XP_022155567.1 (mediator of RNA polymerase II transcription subunit 33B-like [Momordica charantia])

HSP 1 Score: 1482.6 bits (3837), Expect = 0.0e+00
Identity = 778/983 (79.15%), Postives = 802/983 (81.59%), Query Frame = 0


Query: 1   MAVSTQPPGQLQGIAGLWDSVLELTKSAQDKNCDPLLWAVQLSSTLSSAGVSLPSVELAQ 60
           M VS QPP QLQG+AGLWDSVLELTKSAQDKNCDPLLWAVQLSS+L+SAGVSLPS+ELAQ
Sbjct: 1   MVVSVQPPSQLQGMAGLWDSVLELTKSAQDKNCDPLLWAVQLSSSLNSAGVSLPSIELAQ 60

Query: 61  LLVSHICWDNHVPIMWKFLEKAMTARIVPPLLVIVLLSTRAIPYRKLRPAAYRLYLELLS 120
           LLVSHICWDNHVPIMWKFLEKAMTA+IVPPLLV+ LLSTRAIPYRKLRPAAYRLYLELLS
Sbjct: 61  LLVSHICWDNHVPIMWKFLEKAMTAKIVPPLLVVALLSTRAIPYRKLRPAAYRLYLELLS 120

Query: 121 RHVFSLSSQINGPNYQRIMQTIDDVLHLTQIFGLQTCDPGVLMVELFFSIVWQLLDASLD 180
           RHVFS +SQINGPNYQRIMQTIDDVLHL+QIF LQ C+PG+LMVELFFSIVWQLLDASLD
Sbjct: 121 RHVFSSTSQINGPNYQRIMQTIDDVLHLSQIFSLQACEPGLLMVELFFSIVWQLLDASLD 180

Query: 181 DEGLLALPGEERSPWLIRPQPHDMELDVHDSFGEKRTENSESVLKVNTAKAIEIIGQFLQ 240
           DEGLL LP EERS WLIRPQPHDMELDVHDSF EKRTENSES+LKVNTAKAIEIIGQFLQ
Sbjct: 181 DEGLLVLPAEERSAWLIRPQPHDMELDVHDSFSEKRTENSESLLKVNTAKAIEIIGQFLQ 240

Query: 241 KKKTARILCLAHRNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLHWTSDKNRLLSR 300
            KKTARIL LAHRNMPLHWAGFAQRLQLLAANS VLRNTKLITPEVLLHWTSDK+RLLSR
Sbjct: 241 NKKTARILYLAHRNMPLHWAGFAQRLQLLAANSAVLRNTKLITPEVLLHWTSDKHRLLSR 300

Query: 301 EGKTSQLEFRDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLI 360
           EGKTSQ EFR+VMASGSLFSSAGQSHGVNWS LWLPIDLFLEDAMDGSQVLATSAVERLI
Sbjct: 301 EGKTSQQEFRNVMASGSLFSSAGQSHGVNWSTLWLPIDLFLEDAMDGSQVLATSAVERLI 360

Query: 361 ---------------------------------------------------------FTI 420
                                                                     TI
Sbjct: 361 CLIKSLQAVNDTSWHNTFMGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSITTLAVTI 420

Query: 421 IIEEEEGELKEEDECSPSKSRDEKQSSGKCRKGLIMSLQMLGEYESLLTPPQSVIAVANQ 480
           IIEE+EGELKEEDECSPSK RDEK+ SGKCRKGLI SLQMLGEYE LLTPPQSV A+ANQ
Sbjct: 421 IIEEDEGELKEEDECSPSKGRDEKKCSGKCRKGLITSLQMLGEYEGLLTPPQSVTAIANQ 480

Query: 481 AATKAVMFISGVAVGNEYYDCVSINDTPINCSGNMRHLIVEACISRNLLDTSAYFWPGYV 540
           AA KAVMFISGVAVGNEYYDCVS+NDTP+NCSGNMRHLIVEACISRNLLDTS YFWPGYV
Sbjct: 481 AAAKAVMFISGVAVGNEYYDCVSMNDTPVNCSGNMRHLIVEACISRNLLDTSVYFWPGYV 540

Query: 541 NARSNQVPRSASSQVVGWSSFMKGSSLTPSMVNALVAAPASRYRNYVVQIKKLTNRFGEV 600
           NARS+QVPRSAS QVVGWSSFMKGSSLT SMV+ALVA PAS                   
Sbjct: 541 NARSSQVPRSASGQVVGWSSFMKGSSLTLSMVDALVATPAS------------------- 600

Query: 601 LEVIKIGKVMHTKSLKFPQKFISLKMVCCLHIYSNEGSKLTYKTVNLAVKTKTVLKQKLK 660
                                                                       
Sbjct: 601 ------------------------------------------------------------ 660

Query: 661 QRSKAHGFDGSLAEIEKIYEIAINGSGDETISAASILCGASLVRGWNLQEHTALFISRLL 720
                     SLAEIEKIYEIA+NGSGDE ISAASILCG SLVRGWNLQEHT LFI+RLL
Sbjct: 661 ----------SLAEIEKIYEIAVNGSGDEKISAASILCGESLVRGWNLQEHTVLFIARLL 720

Query: 721 SPPIPADFSGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFGS 780
           SPPIPAD+SGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFG 
Sbjct: 721 SPPIPADYSGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFGL 780

Query: 781 SPPKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDARPVGSQLTPEYLLLV 840
           SPPKSW+LTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVK DARPVGSQLTPEYLLLV
Sbjct: 781 SPPKSWVLTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKRDARPVGSQLTPEYLLLV 840

Query: 841 RNSQLASFGKSPKDRLKARRLSKLLKFSLEPIFMDSFPKLKGWYRQHQECIASILSGLVP 900
           RNSQLASFGKSPKDR K RRLSKLLKFSLEPIFMDSFPKLKGWYRQHQECIASILSGLVP
Sbjct: 841 RNSQLASFGKSPKDRFKVRRLSKLLKFSLEPIFMDSFPKLKGWYRQHQECIASILSGLVP 894

Query: 901 GAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSANEEASIKLKVPAWDILEATP 927
           GAPVHQIVDALLTMMFRKINRGG SLTSTTSGSSNSSGSANEEASIKLKVPAWDILEATP
Sbjct: 901 GAPVHQIVDALLTMMFRKINRGGHSLTSTTSGSSNSSGSANEEASIKLKVPAWDILEATP 894

[Close]

BLAST of HG10011927.1 vs. NCBI nr
Match: XP_023554812.1 (mediator of RNA polymerase II transcription subunit 33B-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1476.5 bits (3821), Expect = 0.0e+00
Identity = 781/984 (79.37%), Postives = 804/984 (81.71%), Query Frame = 0


Query: 1   MAVSTQPPGQLQGIAGLWDSVLELTKSAQDKNCDPLLWAVQLSSTLSSAGVSLPSVELAQ 60
           MAVS QPPGQLQGIAG+WD+VLELTKSAQ+KN DPLLWAVQLSS+L+SA VSLPSVELA 
Sbjct: 1   MAVSAQPPGQLQGIAGVWDTVLELTKSAQEKNSDPLLWAVQLSSSLNSASVSLPSVELAH 60

Query: 61  LLVSHICWDNHVPIMWKFLEKAMTARIVPPLLVIVLLSTRAIPYRKLRPAAYRLYLELLS 120
           LLVSHICWDNHVPIMWKFLEKAMTARIVPPLLVI LLSTRAIPYRKLRPAAYRLYLELLS
Sbjct: 61  LLVSHICWDNHVPIMWKFLEKAMTARIVPPLLVIALLSTRAIPYRKLRPAAYRLYLELLS 120

Query: 121 RHVFSLSSQINGPNYQRIMQTIDDVLHLTQIFGLQTCDPGVLMVELFFSIVWQLLDASLD 180
           RHVFS + ++NGPNY RIMQTIDDVLHL+QIFGLQTC+PG+LMVELFFSIVW LLDASLD
Sbjct: 121 RHVFSSTLEVNGPNYPRIMQTIDDVLHLSQIFGLQTCEPGLLMVELFFSIVWHLLDASLD 180

Query: 181 DEGLLALPGEERSPWLIRPQPHDMELDVHDSFGEKRTENSESVLKVNTAKAIEIIGQFLQ 240
           DEGLL LP EERS WLIRPQPHDMELDVHDSFGEK+TENSE++LKVNTAKAIEIIGQFLQ
Sbjct: 181 DEGLLELPAEERSVWLIRPQPHDMELDVHDSFGEKKTENSENLLKVNTAKAIEIIGQFLQ 240

Query: 241 KKKTARILCLAHRNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLHWTSDKNRLLSR 300
            KKTARILCLAH+NMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLHWTSDK+R LS+
Sbjct: 241 NKKTARILCLAHQNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLHWTSDKHRFLSQ 300

Query: 301 EGK-TSQLEFRDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERL 360
           EGK TSQLEF DVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERL
Sbjct: 301 EGKTTSQLEFHDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERL 360

Query: 361 I---------------------------------------------------------FT 420
           I                                                          T
Sbjct: 361 ICLIKSLRAVNDASWHNTFLGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSITTLAVT 420

Query: 421 IIIEEEEGELKEEDECSPSKSRDEKQSSGKCRKGLIMSLQMLGEYESLLTPPQSVIAVAN 480
           IIIEEEEGELKEEDECSPSKSRDEKQSSGK R+GLI SLQMLGEYESLLTPPQSVI VAN
Sbjct: 421 IIIEEEEGELKEEDECSPSKSRDEKQSSGKRRQGLITSLQMLGEYESLLTPPQSVIVVAN 480

Query: 481 QAATKAVMFISGVAVGNEYYDCVSINDTPINCSGNMRHLIVEACISRNLLDTSAYFWPGY 540
           QAA KAVMFISGVAVGNEYYDCVS+NDTPINCSGNMRHLIVEACISRNLLDTSAYFWPGY
Sbjct: 481 QAAAKAVMFISGVAVGNEYYDCVSMNDTPINCSGNMRHLIVEACISRNLLDTSAYFWPGY 540

Query: 541 VNARSNQVPRSASSQVVGWSSFMKGSSLTPSMVNALVAAPASRYRNYVVQIKKLTNRFGE 600
           VN RS+QVPRSASSQVVGWSSFMKGSSLTPSMVNAL A PAS                  
Sbjct: 541 VNTRSSQVPRSASSQVVGWSSFMKGSSLTPSMVNALEATPAS------------------ 600

Query: 601 VLEVIKIGKVMHTKSLKFPQKFISLKMVCCLHIYSNEGSKLTYKTVNLAVKTKTVLKQKL 660
                                                                       
Sbjct: 601 ------------------------------------------------------------ 660

Query: 661 KQRSKAHGFDGSLAEIEKIYEIAINGSGDETISAASILCGASLVRGWNLQEHTALFISRL 720
                      SLAEIEKIYEIAINGSGDE ISAASILCGASLVRGWNLQEHT LFISRL
Sbjct: 661 -----------SLAEIEKIYEIAINGSGDEKISAASILCGASLVRGWNLQEHTVLFISRL 720

Query: 721 LSPPIPADFSGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFG 780
           LSPPIPAD+ GSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFG
Sbjct: 721 LSPPIPADYPGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFG 780

Query: 781 SSPPKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDARPVGSQLTPEYLLL 840
           SS PKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPP+ENVKGDARPVGSQLTPEYLLL
Sbjct: 781 SSTPKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPIENVKGDARPVGSQLTPEYLLL 840

Query: 841 VRNSQLASFGKSPKDRLKARRLSKLLKFSLEPIFMDSFPKLKGWYRQHQECIASILSGLV 900
           VRNSQLASFGKSPKDRLK RRLSKLLKFSLEP FMDSFPKLKGWYRQHQECIASI  GLV
Sbjct: 841 VRNSQLASFGKSPKDRLKVRRLSKLLKFSLEPTFMDSFPKLKGWYRQHQECIASIPPGLV 895

Query: 901 PGAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSANEEASIKLKVPAWDILEAT 927
           PGAPVHQ VDALLTMMF+KINRGGQSLTSTTS SSNSSGSANEEASIKLKVPAWDILEAT
Sbjct: 901 PGAPVHQTVDALLTMMFKKINRGGQSLTSTTSASSNSSGSANEEASIKLKVPAWDILEAT 895

[Close]

BLAST of HG10011927.1 vs. NCBI nr
Match: XP_022963527.1 (mediator of RNA polymerase II transcription subunit 33B-like [Cucurbita moschata])

HSP 1 Score: 1475.7 bits (3819), Expect = 0.0e+00
Identity = 781/984 (79.37%), Postives = 804/984 (81.71%), Query Frame = 0


Query: 1   MAVSTQPPGQLQGIAGLWDSVLELTKSAQDKNCDPLLWAVQLSSTLSSAGVSLPSVELAQ 60
           MAVS QPPGQLQGIAG+WD+VLELTKSAQ+KN DPLLWAVQLSS+L+SA VSLPSVELA 
Sbjct: 1   MAVSAQPPGQLQGIAGVWDTVLELTKSAQEKNSDPLLWAVQLSSSLNSASVSLPSVELAH 60

Query: 61  LLVSHICWDNHVPIMWKFLEKAMTARIVPPLLVIVLLSTRAIPYRKLRPAAYRLYLELLS 120
           LLVSHICWDNHVPIMWKFLEKAMTARIVPPLLVI LLSTRAIPYRKLRPAAYRLYLELLS
Sbjct: 61  LLVSHICWDNHVPIMWKFLEKAMTARIVPPLLVIALLSTRAIPYRKLRPAAYRLYLELLS 120

Query: 121 RHVFSLSSQINGPNYQRIMQTIDDVLHLTQIFGLQTCDPGVLMVELFFSIVWQLLDASLD 180
           RHVFS + ++NGPNY RIMQTIDDVLHL+QIFGLQTC+PG+LMVELFFSIVW LLDASLD
Sbjct: 121 RHVFSSTLEVNGPNYPRIMQTIDDVLHLSQIFGLQTCEPGLLMVELFFSIVWHLLDASLD 180

Query: 181 DEGLLALPGEERSPWLIRPQPHDMELDVHDSFGEKRTENSESVLKVNTAKAIEIIGQFLQ 240
           DEGLL LP EERS WLIRPQPHDMELDVHDSFGEK+TENSE++LKVNTAKAIEIIGQFLQ
Sbjct: 181 DEGLLELPAEERSVWLIRPQPHDMELDVHDSFGEKKTENSENLLKVNTAKAIEIIGQFLQ 240

Query: 241 KKKTARILCLAHRNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLHWTSDKNRLLSR 300
            KKTARILCLAH+NMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLL WTSDK+R LS+
Sbjct: 241 NKKTARILCLAHQNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLQWTSDKHRFLSQ 300

Query: 301 EGKT-SQLEFRDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERL 360
           EGKT SQLEF DVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERL
Sbjct: 301 EGKTKSQLEFHDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERL 360

Query: 361 I---------------------------------------------------------FT 420
           I                                                          T
Sbjct: 361 ICLIKSLRAVNDASWHNTFLGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSITTLAVT 420

Query: 421 IIIEEEEGELKEEDECSPSKSRDEKQSSGKCRKGLIMSLQMLGEYESLLTPPQSVIAVAN 480
           IIIEEEEGELKEEDECSPSKSRDEKQSSGK R+GLI SLQMLGEYESLLTPPQSVI VAN
Sbjct: 421 IIIEEEEGELKEEDECSPSKSRDEKQSSGKRRQGLITSLQMLGEYESLLTPPQSVIVVAN 480

Query: 481 QAATKAVMFISGVAVGNEYYDCVSINDTPINCSGNMRHLIVEACISRNLLDTSAYFWPGY 540
           QAA KAVMFISGVAVGNEYYDCVS+NDTPINCSGNMRHLIVEACISRNLLDTSAYFWPGY
Sbjct: 481 QAAAKAVMFISGVAVGNEYYDCVSMNDTPINCSGNMRHLIVEACISRNLLDTSAYFWPGY 540

Query: 541 VNARSNQVPRSASSQVVGWSSFMKGSSLTPSMVNALVAAPASRYRNYVVQIKKLTNRFGE 600
           VN RS+QVPRSASSQVVGWSSFMKGSSLTPSMVNALVA PAS                  
Sbjct: 541 VNTRSSQVPRSASSQVVGWSSFMKGSSLTPSMVNALVATPAS------------------ 600

Query: 601 VLEVIKIGKVMHTKSLKFPQKFISLKMVCCLHIYSNEGSKLTYKTVNLAVKTKTVLKQKL 660
                                                                       
Sbjct: 601 ------------------------------------------------------------ 660

Query: 661 KQRSKAHGFDGSLAEIEKIYEIAINGSGDETISAASILCGASLVRGWNLQEHTALFISRL 720
                      SLAEIEKIYEIAINGSGDE ISAASILCGASLVRGWNLQEHT LFISRL
Sbjct: 661 -----------SLAEIEKIYEIAINGSGDEKISAASILCGASLVRGWNLQEHTVLFISRL 720

Query: 721 LSPPIPADFSGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFG 780
           LSPPIPAD+ GSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFG
Sbjct: 721 LSPPIPADYPGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFG 780

Query: 781 SSPPKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDARPVGSQLTPEYLLL 840
           SS PKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPP+ENVKGDARPVGSQLTPEYLLL
Sbjct: 781 SSTPKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPIENVKGDARPVGSQLTPEYLLL 840

Query: 841 VRNSQLASFGKSPKDRLKARRLSKLLKFSLEPIFMDSFPKLKGWYRQHQECIASILSGLV 900
           VRNSQLASFGKSPKDRLK RRLSKLLKFSLEP FMDSFPKLKGWYRQHQECIASI  GLV
Sbjct: 841 VRNSQLASFGKSPKDRLKVRRLSKLLKFSLEPTFMDSFPKLKGWYRQHQECIASIPPGLV 895

Query: 901 PGAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSANEEASIKLKVPAWDILEAT 927
           PGAPVHQ VDALLTMMF+KINRGGQSLTSTTS SSNSSGSANEEASIKLKVPAWDILEAT
Sbjct: 901 PGAPVHQTVDALLTMMFKKINRGGQSLTSTTSASSNSSGSANEEASIKLKVPAWDILEAT 895

[Close]

BLAST of HG10011927.1 vs. ExPASy Swiss-Prot
Match: Q9LUG9 (Mediator of RNA polymerase II transcription subunit 33A OS=Arabidopsis thaliana OX=3702 GN=MED33A PE=1 SV=1)

HSP 1 Score: 791.2 bits (2042), Expect = 1.3e-227
Identity = 440/953 (46.17%), Postives = 589/953 (61.80%), Query Frame = 0


Query: 17  LWDSVLELTKSAQDKNCDPLLWAVQLSSTLSSAGVSLPSVELAQLLVSHICWDNHVPIMW 76
           +WD V+ELTK AQ+   DP LWA QLSS L    V LPS ELA+++VS+ICWDN+VPI+W
Sbjct: 9   VWDCVIELTKMAQENCVDPRLWASQLSSNLKFFAVELPSTELAEVIVSYICWDNNVPIVW 68

Query: 77  KFLEKAMTARIVPPLLVIVLLSTRAIPYRKLRPAAYRLYLELLSRHVFSLSSQINGPNYQ 136
           KFLE+AM  ++V PL+V+ LL+ R +P R  + AAYR+YLELL R++F++   I+GP+YQ
Sbjct: 69  KFLERAMALKLVSPLVVLALLADRVVPTRSTQQAAYRIYLELLKRNMFTIKDHISGPHYQ 128

Query: 137 RIMQTIDDVLHLTQIFGLQTCDPGVLMVELFFSIVWQLLDASLDDEGLLALPGEERSPWL 196
           ++M ++ ++L L+++F L T  PGVL+VE  F +V QLLDA+L DEGLL L  +  S WL
Sbjct: 129 KVMISVSNILRLSELFDLDTSKPGVLLVEFVFKMVSQLLDAALSDEGLLELSQDSSSQWL 188

Query: 197 IRPQPHDMELDVHDSFGEKRTENSESVLKVNTAKAIEIIGQFLQKKKTARILCLAHRNMP 256
           ++ Q  DME+D  + + EK T + E +  +NT  AIE+I +FL+    AR+L L   N  
Sbjct: 189 VKSQ--DMEIDAPERYNEK-TGSLEKLQSLNTIMAIELIAEFLRNTVIARLLYLVSSNRA 248

Query: 257 LHWAGFAQRLQLLAANSVVLRNTKLITPEVLLHWTSDKNRLLSREGK-TSQLEFRDVMAS 316
             W  F Q++QLL  NS  L+++K++    LL   S++    S + K TS  +   ++  
Sbjct: 249 SKWHEFVQKVQLLGENSSALKHSKVLNSGDLLQLISNRRFGYSYDSKVTSARKSNAIVDF 308

Query: 317 GSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLI-FTIIIEEEEGEL-- 376
           GSL S AG  HG + S+LWLP+DL  EDAMDG QV  TSA+E +      ++E  G    
Sbjct: 309 GSLSSYAGLCHGASLSSLWLPLDLVFEDAMDGYQVNPTSAIEIITGLAKTLKEINGSTWH 368

Query: 377 ---------------KEEDEC-SPSKSRDEKQSSGKC----------------------R 436
                          +E D    P    D +     C                      R
Sbjct: 369 DTFLGLWIAALRLVQRERDPIEGPIPRLDTRLCMSLCIVPLVVANLIEEGKYESVMEKLR 428

Query: 437 KGLIMSLQMLGEYESLLTPPQSVIAVANQAATKAVMFISGVAVGNEYYDCVSINDTPINC 496
             L+ SLQ+LG++  LL PP+ V++ AN+AATKA++F+SG  VG   +D +++ D P+NC
Sbjct: 429 DDLVTSLQVLGDFPGLLAPPKCVVSAANKAATKAILFLSGGNVGKSCFDVINMKDMPVNC 488

Query: 497 SGNMRHLIVEACISRNLLDTSAYFWPGYVNARSNQVPRSASSQVVGWSSFMKGSSLTPSM 556
           SGNMRHLIVEACI+RN+LD SAY WPGYVN R NQ+P+S  ++V  WSSF+KG+ L  +M
Sbjct: 489 SGNMRHLIVEACIARNILDMSAYSWPGYVNGRINQIPQSLPNEVPCWSSFVKGAPLNAAM 548

Query: 557 VNALVAAPASRYRNYVVQIKKLTNRFGEVLEVIKIGKVMHTKSLKFPQKFISLKMVCCLH 616
           VN LV+ PAS                                                  
Sbjct: 549 VNTLVSVPAS-------------------------------------------------- 608

Query: 617 IYSNEGSKLTYKTVNLAVKTKTVLKQKLKQRSKAHGFDGSLAEIEKIYEIAINGSGDETI 676
                                                  SLAE+EK++E+A+ GS DE I
Sbjct: 609 ---------------------------------------SLAELEKLFEVAVKGSDDEKI 668

Query: 677 SAASILCGASLVRGWNLQEHTALFISRLLSPPIPADFSGSDSYLIDYAPFLNVLLVGISS 736
           SAA++LCGASL RGWN+QEHT  +++RLLSPP+PAD+S ++++LI YA  LNV++VGI S
Sbjct: 669 SAATVLCGASLTRGWNIQEHTVEYLTRLLSPPVPADYSRAENHLIGYACMLNVVIVGIGS 728

Query: 737 VDCVQIFSLHGMVPLLAGQLMPICEAFGS-SPPKSWILTSGEELTCHAVFSLAFTLLLRL 796
           VD +QIFSLHGMVP LA  LMPICE FGS +P  SW L SGE ++ ++VFS AFTLLL+L
Sbjct: 729 VDSIQIFSLHGMVPQLACSLMPICEEFGSYTPSVSWTLPSGEAISAYSVFSNAFTLLLKL 788

Query: 797 WRFHHPPVENVKGDARPVGSQLTPEYLLLVRNSQLASFGKSPKDRLKARRLSKLLKFSLE 856
           WRF+HPP+E+  GD   VGSQLTPE+LL VRNS L S     +DR + R        S +
Sbjct: 789 WRFNHPPIEHGVGDVPTVGSQLTPEHLLSVRNSYLVSSEILDRDRNRKRLSEVARAASCQ 848

Query: 857 PIFMDSFPKLKGWYRQHQECIASILSGLVPGAPVHQIVDALLTMMFRKINRGGQSLTSTT 916
           P+F+DSFPKLK WYRQHQ CIA+ LSGL  G+PVHQ V+ALL M F K+ RG Q+L    
Sbjct: 849 PVFVDSFPKLKVWYRQHQRCIAATLSGLTHGSPVHQTVEALLNMTFGKV-RGSQTLNPVN 868

Query: 917 SGSSNSSGSANEEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPRDLATG 927
           SG+S+SSG+A+E+++I+ + PAWDIL+A P+V+DAALTAC HGRLSPR LATG
Sbjct: 909 SGTSSSSGAASEDSNIRPEFPAWDILKAVPYVVDAALTACTHGRLSPRQLATG 868

[Close]

BLAST of HG10011927.1 vs. ExPASy Swiss-Prot
Match: F4IN69 (Mediator of RNA polymerase II transcription subunit 33B OS=Arabidopsis thaliana OX=3702 GN=MED33B PE=1 SV=1)

HSP 1 Score: 751.9 bits (1940), Expect = 8.6e-216
Identity = 455/988 (46.05%), Postives = 557/988 (56.38%), Query Frame = 0


Query: 17  LWDSVLELTKSAQDKNCDPLLWAVQLSSTLSSAGVSLPSVELAQLLVSHICWDNHVPIMW 76
           LW+SV  L +SAQ+KN DPL WA+QL  TL+SAG+SLPS +LAQ LV+HI W+NH P+ W
Sbjct: 10  LWESVTSLIRSAQEKNVDPLHWALQLRLTLASAGISLPSPDLAQFLVTHIFWENHSPLSW 69

Query: 77  KFLEKAMTARIVPPLLVIVLLSTRAIPYRKLRPAAYRLYLELLSRHVFSLSSQINGPNYQ 136
           K LEKA++  IVPPLLV+ LLS R IP RKL PAAYRLY+ELL RH FS    I  P Y 
Sbjct: 70  KLLEKAISVNIVPPLLVLALLSPRVIPNRKLHPAAYRLYMELLKRHAFSFMPLIRAPGYH 129

Query: 137 RIMQTIDDVLHLTQIFGLQTCDPGVLMVELFFSIVWQLLDASLDDEGLLALPGEERSPWL 196
           + M +IDD+LHL++ FG+Q  +PG +++   FSIVW+LLDASLD+EGLL L   +RS W 
Sbjct: 130 KTMNSIDDILHLSETFGVQDQEPGSILLAFVFSIVWELLDASLDEEGLLELTSNKRSKW- 189

Query: 197 IRPQPHDMELDVHDSFGEKRTENSESVLKVNTAKAIEIIGQFLQKKKTARILCLAHRNMP 256
               PHDM+LD  ++   KR EN +++ K NT  AIE+I +FLQ K T+RIL LA +NM 
Sbjct: 190 -PSSPHDMDLDGLEN-SVKRNENHDALEKANTEMAIELIQEFLQNKVTSRILHLASQNM- 249

Query: 257 LHWAGFAQRLQLLAANSVVLRNTKLITPEVLLHWTSDKNRLLSREGKT-SQLEFRDVMAS 316
                                                       E KT  + EF  +++S
Sbjct: 250 --------------------------------------------ESKTIPRGEFHAIVSS 309

Query: 317 GSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLIFTI------------ 376
           GS  +          SALWLPIDLF ED MDG+Q  A SAVE L   +            
Sbjct: 310 GSKLALTSD------SALWLPIDLFFEDIMDGTQAAAASAVENLTGLVKALQAANSTSWH 369

Query: 377 ------------------------------------------------------------ 436
                                                                       
Sbjct: 370 DAFLALWLAALRLVQRENLCLRYCFFMHMLEILSEERDPIEGPVPRTDTFLCVLLSVTPL 429

Query: 437 ----IIEEEEGELKEEDECSPSKSRDEKQSSGKCRKGLIMSLQMLGEYESLLTPPQSVIA 496
               IIEEEE +  ++   SPS    EK+  GKCR+GLI SLQ LG+YESLLTPP+SV +
Sbjct: 430 AVANIIEEEESQWIDQTSSSPSNQWKEKK--GKCRQGLINSLQQLGDYESLLTPPRSVQS 489

Query: 497 VANQAATKAVMFISGVAVGNEYYDCVSINDTPINCSGNMRHLIVEACISRNLLDTSAYFW 556
           VANQAA KA+MFISG+   N  Y+  S++++   C           C  R  L T   F 
Sbjct: 490 VANQAAAKAIMFISGITNSNGSYENTSMSESASGC-----------CKVRFSLFTLKMFV 549

Query: 557 PGYVNARSNQVPRSASSQVVGWSSFMKGSSLTPSMVNALVAAPASRYRNYVVQIKKLTNR 616
              V    N         +  WS  MKGS LTPS+ N+L+  PAS               
Sbjct: 550 VMGVYLLCN---------ISCWSLVMKGSPLTPSLTNSLITTPAS--------------- 609

Query: 617 FGEVLEVIKIGKVMHTKSLKFPQKFISLKMVCCLHIYSNEGSKLTYKTVNLAVKTKTVLK 676
                                                                       
Sbjct: 610 ------------------------------------------------------------ 669

Query: 677 QKLKQRSKAHGFDGSLAEIEKIYEIAINGSGDETISAASILCGASLVRGWNLQEHTALFI 736
                         SLAEIEK+YE+A  GS DE I+ ASILCGASL RGW++QEH  +FI
Sbjct: 670 --------------SLAEIEKMYEVATTGSEDEKIAVASILCGASLFRGWSIQEHVIIFI 729

Query: 737 SRLLSPPIPADFSGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICE 796
             LLSPP PAD SGS S+LI+ APFLNVLLVGIS +DCV IFSLHG+VPLLAG LMPICE
Sbjct: 730 VTLLSPPAPADLSGSYSHLINSAPFLNVLLVGISPIDCVHIFSLHGVVPLLAGALMPICE 789

Query: 797 AFGSSPPK-SWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDARPVGSQLTPE 856
           AFGS  P  +W L +GE ++ HAVFS AFTLLLRLWRF HPP++ V GD  PVG Q +PE
Sbjct: 790 AFGSGVPNITWTLPTGELISSHAVFSTAFTLLLRLWRFDHPPLDYVLGDVPPVGPQPSPE 832

Query: 857 YLLLVRNSQLASFGKSPKDRLKARRLSKLLKFSLEPIFMDSFPKLKGWYRQHQECIASIL 916
           YLLLVRN +L  FGKSPKDR+  RR SK++  S++PIFMDSFP+LK WYRQHQEC+ASIL
Sbjct: 850 YLLLVRNCRLECFGKSPKDRMARRRFSKVIDISVDPIFMDSFPRLKQWYRQHQECMASIL 832

Query: 917 SGLVPGAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSANEEASIKLKVPAWDI 927
           S L  G+PVH IVD+LL+MMF+K N+GG    + +SGSS+ S S  +++S +LK+PAWDI
Sbjct: 910 SELKTGSPVHHIVDSLLSMMFKKANKGGSQSLTPSSGSSSLSTSGGDDSSDQLKLPAWDI 832

[Close]

BLAST of HG10011927.1 vs. ExPASy TrEMBL
Match: A0A1S3BMJ1 (mediator of RNA polymerase II transcription subunit 33B-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491278 PE=4 SV=1)

HSP 1 Score: 1483.4 bits (3839), Expect = 0.0e+00
Identity = 787/983 (80.06%), Postives = 807/983 (82.10%), Query Frame = 0


Query: 1   MAVSTQPPGQLQGIAGLWDSVLELTKSAQDKNCDPLLWAVQLSSTLSSAGVSLPSVELAQ 60
           MAVS QPPGQLQGIAGLWD+VLE+TKSAQDKNCDPLLWAVQLSSTL+SAGVSLPSVELAQ
Sbjct: 1   MAVSAQPPGQLQGIAGLWDTVLEVTKSAQDKNCDPLLWAVQLSSTLNSAGVSLPSVELAQ 60

Query: 61  LLVSHICWDNHVPIMWKFLEKAMTARIVPPLLVIVLLSTRAIPYRKLRPAAYRLYLELLS 120
           LLVSHICWDNHVPIMWKFLEKAMTARIVPPLLVI LLSTRAIPYRKL+PAAYRLYLELLS
Sbjct: 61  LLVSHICWDNHVPIMWKFLEKAMTARIVPPLLVIALLSTRAIPYRKLQPAAYRLYLELLS 120

Query: 121 RHVFSLSSQINGPNYQRIMQTIDDVLHLTQIFGLQTCDPGVLMVELFFSIVWQLLDASLD 180
           RHVFS +SQI GPNYQRIMQTIDDVLHLTQIFGLQTC+PGVLMVELFFSIVWQLLDASLD
Sbjct: 121 RHVFSSTSQIYGPNYQRIMQTIDDVLHLTQIFGLQTCEPGVLMVELFFSIVWQLLDASLD 180

Query: 181 DEGLLALPGEERSPWLIRPQPHDMELDVHDSFGEKRTENSESVLKVNTAKAIEIIGQFLQ 240
           DEGLLALPGEE+S WLIRPQ HDMELDVHDSFGEK+TENSES+LKVNTAKAIEIIGQFLQ
Sbjct: 181 DEGLLALPGEEKSAWLIRPQLHDMELDVHDSFGEKKTENSESLLKVNTAKAIEIIGQFLQ 240

Query: 241 KKKTARILCLAHRNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLHWTSDKNRLLSR 300
            KKT RILCLA RNMPL WAGFAQRLQLL ANSVVL N KLITPEVLLHWTSDKN+LLS+
Sbjct: 241 NKKTERILCLALRNMPLQWAGFAQRLQLLGANSVVLGNAKLITPEVLLHWTSDKNKLLSQ 300

Query: 301 EGKTSQLEFRDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLI 360
           +GKTSQLEFRDVM+SGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLI
Sbjct: 301 KGKTSQLEFRDVMSSGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLI 360

Query: 361 ---------------------------------------------------------FTI 420
                                                                     TI
Sbjct: 361 CLIKSLRAVNDTSWHNTFLGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSISTLAVTI 420

Query: 421 IIEEEEGELKEEDECSPSKSRDEKQSSGKCRKGLIMSLQMLGEYESLLTPPQSVIAVANQ 480
           IIEEEE E K ED+CSPSKSRDEKQSSG CRKGLI SLQMLGEYESLLTPPQS+IAVANQ
Sbjct: 421 IIEEEEVEPK-EDDCSPSKSRDEKQSSGMCRKGLITSLQMLGEYESLLTPPQSIIAVANQ 480

Query: 481 AATKAVMFISGVAVGNEYYDCVSINDTPINCSGNMRHLIVEACISRNLLDTSAYFWPGYV 540
           AA KAVMFISGVAVGNEYYDC S+ND PINCSGNMRHLIVEACISRNLLDTSAYFWPGYV
Sbjct: 481 AAAKAVMFISGVAVGNEYYDCASMNDAPINCSGNMRHLIVEACISRNLLDTSAYFWPGYV 540

Query: 541 NARSNQVPRSASSQVVGWSSFMKGSSLTPSMVNALVAAPASRYRNYVVQIKKLTNRFGEV 600
           NA S+QVPRSAS+QVVGWSSFMKGS LTPSMVNALVA PAS                   
Sbjct: 541 NALSSQVPRSASNQVVGWSSFMKGSPLTPSMVNALVATPAS------------------- 600

Query: 601 LEVIKIGKVMHTKSLKFPQKFISLKMVCCLHIYSNEGSKLTYKTVNLAVKTKTVLKQKLK 660
                                                                       
Sbjct: 601 ------------------------------------------------------------ 660

Query: 661 QRSKAHGFDGSLAEIEKIYEIAINGSGDETISAASILCGASLVRGWNLQEHTALFISRLL 720
                     SLAEIEKIYEIAINGSGDE ISAASILCGASLVRGW LQEHTALFISRLL
Sbjct: 661 ----------SLAEIEKIYEIAINGSGDEKISAASILCGASLVRGWYLQEHTALFISRLL 720

Query: 721 SPPIPADFSGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFGS 780
            PPIP D+SGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFGS
Sbjct: 721 LPPIPTDYSGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFGS 780

Query: 781 SPPKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDARPVGSQLTPEYLLLV 840
           SPPKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDARPVGSQLTPEYLLLV
Sbjct: 781 SPPKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDARPVGSQLTPEYLLLV 840

Query: 841 RNSQLASFGKSPKDRLKARRLSKLLKFSLEPIFMDSFPKLKGWYRQHQECIASILSGLVP 900
           RNSQLASFGKSP DRLKARRLSKLLKFSL+PIFMDSFPKLKGWYRQHQECIASILSGLVP
Sbjct: 841 RNSQLASFGKSPNDRLKARRLSKLLKFSLQPIFMDSFPKLKGWYRQHQECIASILSGLVP 893

Query: 901 GAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSANEEASIKLKVPAWDILEATP 927
           GAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSANEEASIKLKVPAWDILEATP
Sbjct: 901 GAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSANEEASIKLKVPAWDILEATP 893

[Close]

BLAST of HG10011927.1 vs. ExPASy TrEMBL
Match: A0A6J1DPP9 (mediator of RNA polymerase II transcription subunit 33B-like OS=Momordica charantia OX=3673 GN=LOC111022676 PE=4 SV=1)

HSP 1 Score: 1482.6 bits (3837), Expect = 0.0e+00
Identity = 778/983 (79.15%), Postives = 802/983 (81.59%), Query Frame = 0


Query: 1   MAVSTQPPGQLQGIAGLWDSVLELTKSAQDKNCDPLLWAVQLSSTLSSAGVSLPSVELAQ 60
           M VS QPP QLQG+AGLWDSVLELTKSAQDKNCDPLLWAVQLSS+L+SAGVSLPS+ELAQ
Sbjct: 1   MVVSVQPPSQLQGMAGLWDSVLELTKSAQDKNCDPLLWAVQLSSSLNSAGVSLPSIELAQ 60

Query: 61  LLVSHICWDNHVPIMWKFLEKAMTARIVPPLLVIVLLSTRAIPYRKLRPAAYRLYLELLS 120
           LLVSHICWDNHVPIMWKFLEKAMTA+IVPPLLV+ LLSTRAIPYRKLRPAAYRLYLELLS
Sbjct: 61  LLVSHICWDNHVPIMWKFLEKAMTAKIVPPLLVVALLSTRAIPYRKLRPAAYRLYLELLS 120

Query: 121 RHVFSLSSQINGPNYQRIMQTIDDVLHLTQIFGLQTCDPGVLMVELFFSIVWQLLDASLD 180
           RHVFS +SQINGPNYQRIMQTIDDVLHL+QIF LQ C+PG+LMVELFFSIVWQLLDASLD
Sbjct: 121 RHVFSSTSQINGPNYQRIMQTIDDVLHLSQIFSLQACEPGLLMVELFFSIVWQLLDASLD 180

Query: 181 DEGLLALPGEERSPWLIRPQPHDMELDVHDSFGEKRTENSESVLKVNTAKAIEIIGQFLQ 240
           DEGLL LP EERS WLIRPQPHDMELDVHDSF EKRTENSES+LKVNTAKAIEIIGQFLQ
Sbjct: 181 DEGLLVLPAEERSAWLIRPQPHDMELDVHDSFSEKRTENSESLLKVNTAKAIEIIGQFLQ 240

Query: 241 KKKTARILCLAHRNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLHWTSDKNRLLSR 300
            KKTARIL LAHRNMPLHWAGFAQRLQLLAANS VLRNTKLITPEVLLHWTSDK+RLLSR
Sbjct: 241 NKKTARILYLAHRNMPLHWAGFAQRLQLLAANSAVLRNTKLITPEVLLHWTSDKHRLLSR 300

Query: 301 EGKTSQLEFRDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLI 360
           EGKTSQ EFR+VMASGSLFSSAGQSHGVNWS LWLPIDLFLEDAMDGSQVLATSAVERLI
Sbjct: 301 EGKTSQQEFRNVMASGSLFSSAGQSHGVNWSTLWLPIDLFLEDAMDGSQVLATSAVERLI 360

Query: 361 ---------------------------------------------------------FTI 420
                                                                     TI
Sbjct: 361 CLIKSLQAVNDTSWHNTFMGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSITTLAVTI 420

Query: 421 IIEEEEGELKEEDECSPSKSRDEKQSSGKCRKGLIMSLQMLGEYESLLTPPQSVIAVANQ 480
           IIEE+EGELKEEDECSPSK RDEK+ SGKCRKGLI SLQMLGEYE LLTPPQSV A+ANQ
Sbjct: 421 IIEEDEGELKEEDECSPSKGRDEKKCSGKCRKGLITSLQMLGEYEGLLTPPQSVTAIANQ 480

Query: 481 AATKAVMFISGVAVGNEYYDCVSINDTPINCSGNMRHLIVEACISRNLLDTSAYFWPGYV 540
           AA KAVMFISGVAVGNEYYDCVS+NDTP+NCSGNMRHLIVEACISRNLLDTS YFWPGYV
Sbjct: 481 AAAKAVMFISGVAVGNEYYDCVSMNDTPVNCSGNMRHLIVEACISRNLLDTSVYFWPGYV 540

Query: 541 NARSNQVPRSASSQVVGWSSFMKGSSLTPSMVNALVAAPASRYRNYVVQIKKLTNRFGEV 600
           NARS+QVPRSAS QVVGWSSFMKGSSLT SMV+ALVA PAS                   
Sbjct: 541 NARSSQVPRSASGQVVGWSSFMKGSSLTLSMVDALVATPAS------------------- 600

Query: 601 LEVIKIGKVMHTKSLKFPQKFISLKMVCCLHIYSNEGSKLTYKTVNLAVKTKTVLKQKLK 660
                                                                       
Sbjct: 601 ------------------------------------------------------------ 660

Query: 661 QRSKAHGFDGSLAEIEKIYEIAINGSGDETISAASILCGASLVRGWNLQEHTALFISRLL 720
                     SLAEIEKIYEIA+NGSGDE ISAASILCG SLVRGWNLQEHT LFI+RLL
Sbjct: 661 ----------SLAEIEKIYEIAVNGSGDEKISAASILCGESLVRGWNLQEHTVLFIARLL 720

Query: 721 SPPIPADFSGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFGS 780
           SPPIPAD+SGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFG 
Sbjct: 721 SPPIPADYSGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFGL 780

Query: 781 SPPKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDARPVGSQLTPEYLLLV 840
           SPPKSW+LTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVK DARPVGSQLTPEYLLLV
Sbjct: 781 SPPKSWVLTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKRDARPVGSQLTPEYLLLV 840

Query: 841 RNSQLASFGKSPKDRLKARRLSKLLKFSLEPIFMDSFPKLKGWYRQHQECIASILSGLVP 900
           RNSQLASFGKSPKDR K RRLSKLLKFSLEPIFMDSFPKLKGWYRQHQECIASILSGLVP
Sbjct: 841 RNSQLASFGKSPKDRFKVRRLSKLLKFSLEPIFMDSFPKLKGWYRQHQECIASILSGLVP 894

Query: 901 GAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSANEEASIKLKVPAWDILEATP 927
           GAPVHQIVDALLTMMFRKINRGG SLTSTTSGSSNSSGSANEEASIKLKVPAWDILEATP
Sbjct: 901 GAPVHQIVDALLTMMFRKINRGGHSLTSTTSGSSNSSGSANEEASIKLKVPAWDILEATP 894

[Close]

BLAST of HG10011927.1 vs. ExPASy TrEMBL
Match: A0A6J1HFH4 (mediator of RNA polymerase II transcription subunit 33B-like OS=Cucurbita moschata OX=3662 GN=LOC111463830 PE=4 SV=1)

HSP 1 Score: 1475.7 bits (3819), Expect = 0.0e+00
Identity = 781/984 (79.37%), Postives = 804/984 (81.71%), Query Frame = 0


Query: 1   MAVSTQPPGQLQGIAGLWDSVLELTKSAQDKNCDPLLWAVQLSSTLSSAGVSLPSVELAQ 60
           MAVS QPPGQLQGIAG+WD+VLELTKSAQ+KN DPLLWAVQLSS+L+SA VSLPSVELA 
Sbjct: 1   MAVSAQPPGQLQGIAGVWDTVLELTKSAQEKNSDPLLWAVQLSSSLNSASVSLPSVELAH 60

Query: 61  LLVSHICWDNHVPIMWKFLEKAMTARIVPPLLVIVLLSTRAIPYRKLRPAAYRLYLELLS 120
           LLVSHICWDNHVPIMWKFLEKAMTARIVPPLLVI LLSTRAIPYRKLRPAAYRLYLELLS
Sbjct: 61  LLVSHICWDNHVPIMWKFLEKAMTARIVPPLLVIALLSTRAIPYRKLRPAAYRLYLELLS 120

Query: 121 RHVFSLSSQINGPNYQRIMQTIDDVLHLTQIFGLQTCDPGVLMVELFFSIVWQLLDASLD 180
           RHVFS + ++NGPNY RIMQTIDDVLHL+QIFGLQTC+PG+LMVELFFSIVW LLDASLD
Sbjct: 121 RHVFSSTLEVNGPNYPRIMQTIDDVLHLSQIFGLQTCEPGLLMVELFFSIVWHLLDASLD 180

Query: 181 DEGLLALPGEERSPWLIRPQPHDMELDVHDSFGEKRTENSESVLKVNTAKAIEIIGQFLQ 240
           DEGLL LP EERS WLIRPQPHDMELDVHDSFGEK+TENSE++LKVNTAKAIEIIGQFLQ
Sbjct: 181 DEGLLELPAEERSVWLIRPQPHDMELDVHDSFGEKKTENSENLLKVNTAKAIEIIGQFLQ 240

Query: 241 KKKTARILCLAHRNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLHWTSDKNRLLSR 300
            KKTARILCLAH+NMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLL WTSDK+R LS+
Sbjct: 241 NKKTARILCLAHQNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLQWTSDKHRFLSQ 300

Query: 301 EGKT-SQLEFRDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERL 360
           EGKT SQLEF DVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERL
Sbjct: 301 EGKTKSQLEFHDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERL 360

Query: 361 I---------------------------------------------------------FT 420
           I                                                          T
Sbjct: 361 ICLIKSLRAVNDASWHNTFLGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSITTLAVT 420

Query: 421 IIIEEEEGELKEEDECSPSKSRDEKQSSGKCRKGLIMSLQMLGEYESLLTPPQSVIAVAN 480
           IIIEEEEGELKEEDECSPSKSRDEKQSSGK R+GLI SLQMLGEYESLLTPPQSVI VAN
Sbjct: 421 IIIEEEEGELKEEDECSPSKSRDEKQSSGKRRQGLITSLQMLGEYESLLTPPQSVIVVAN 480

Query: 481 QAATKAVMFISGVAVGNEYYDCVSINDTPINCSGNMRHLIVEACISRNLLDTSAYFWPGY 540
           QAA KAVMFISGVAVGNEYYDCVS+NDTPINCSGNMRHLIVEACISRNLLDTSAYFWPGY
Sbjct: 481 QAAAKAVMFISGVAVGNEYYDCVSMNDTPINCSGNMRHLIVEACISRNLLDTSAYFWPGY 540

Query: 541 VNARSNQVPRSASSQVVGWSSFMKGSSLTPSMVNALVAAPASRYRNYVVQIKKLTNRFGE 600
           VN RS+QVPRSASSQVVGWSSFMKGSSLTPSMVNALVA PAS                  
Sbjct: 541 VNTRSSQVPRSASSQVVGWSSFMKGSSLTPSMVNALVATPAS------------------ 600

Query: 601 VLEVIKIGKVMHTKSLKFPQKFISLKMVCCLHIYSNEGSKLTYKTVNLAVKTKTVLKQKL 660
                                                                       
Sbjct: 601 ------------------------------------------------------------ 660

Query: 661 KQRSKAHGFDGSLAEIEKIYEIAINGSGDETISAASILCGASLVRGWNLQEHTALFISRL 720
                      SLAEIEKIYEIAINGSGDE ISAASILCGASLVRGWNLQEHT LFISRL
Sbjct: 661 -----------SLAEIEKIYEIAINGSGDEKISAASILCGASLVRGWNLQEHTVLFISRL 720

Query: 721 LSPPIPADFSGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFG 780
           LSPPIPAD+ GSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFG
Sbjct: 721 LSPPIPADYPGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFG 780

Query: 781 SSPPKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDARPVGSQLTPEYLLL 840
           SS PKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPP+ENVKGDARPVGSQLTPEYLLL
Sbjct: 781 SSTPKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPIENVKGDARPVGSQLTPEYLLL 840

Query: 841 VRNSQLASFGKSPKDRLKARRLSKLLKFSLEPIFMDSFPKLKGWYRQHQECIASILSGLV 900
           VRNSQLASFGKSPKDRLK RRLSKLLKFSLEP FMDSFPKLKGWYRQHQECIASI  GLV
Sbjct: 841 VRNSQLASFGKSPKDRLKVRRLSKLLKFSLEPTFMDSFPKLKGWYRQHQECIASIPPGLV 895

Query: 901 PGAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSANEEASIKLKVPAWDILEAT 927
           PGAPVHQ VDALLTMMF+KINRGGQSLTSTTS SSNSSGSANEEASIKLKVPAWDILEAT
Sbjct: 901 PGAPVHQTVDALLTMMFKKINRGGQSLTSTTSASSNSSGSANEEASIKLKVPAWDILEAT 895

[Close]

BLAST of HG10011927.1 vs. ExPASy TrEMBL
Match: A0A6J1HUY1 (mediator of RNA polymerase II transcription subunit 33B-like OS=Cucurbita maxima OX=3661 GN=LOC111466930 PE=4 SV=1)

HSP 1 Score: 1466.1 bits (3794), Expect = 0.0e+00
Identity = 774/984 (78.66%), Postives = 803/984 (81.61%), Query Frame = 0


Query: 1   MAVSTQPPGQLQGIAGLWDSVLELTKSAQDKNCDPLLWAVQLSSTLSSAGVSLPSVELAQ 60
           MAVS QPPGQLQGIAG+WD+VLELTKSAQ+KN DPLLWAV LSS+L+SA VSLPSVELAQ
Sbjct: 1   MAVSAQPPGQLQGIAGVWDTVLELTKSAQEKNSDPLLWAVHLSSSLNSASVSLPSVELAQ 60

Query: 61  LLVSHICWDNHVPIMWKFLEKAMTARIVPPLLVIVLLSTRAIPYRKLRPAAYRLYLELLS 120
           LLVSHICWDNHVPIMWKFLEKAMTARIVPPLLVI LLSTRAIPYRKLRPAAYRLYLELLS
Sbjct: 61  LLVSHICWDNHVPIMWKFLEKAMTARIVPPLLVIALLSTRAIPYRKLRPAAYRLYLELLS 120

Query: 121 RHVFSLSSQINGPNYQRIMQTIDDVLHLTQIFGLQTCDPGVLMVELFFSIVWQLLDASLD 180
           RHVFS + ++NGPNY RIMQTIDDVLHL+QIFGLQTC+PG+L+VELFFSIVW LLDASLD
Sbjct: 121 RHVFSSTLEVNGPNYPRIMQTIDDVLHLSQIFGLQTCEPGLLVVELFFSIVWHLLDASLD 180

Query: 181 DEGLLALPGEERSPWLIRPQPHDMELDVHDSFGEKRTENSESVLKVNTAKAIEIIGQFLQ 240
           DEGLL LP EERS WLIRPQPH+MELDVH+SFGEK+TENSE++LKVNTAKAIEIIGQFLQ
Sbjct: 181 DEGLLELPAEERSVWLIRPQPHNMELDVHNSFGEKKTENSENLLKVNTAKAIEIIGQFLQ 240

Query: 241 KKKTARILCLAHRNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLHWTSDKNRLLSR 300
            KKTARILCLAH+NMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLHWTSDK+R LS+
Sbjct: 241 NKKTARILCLAHQNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLHWTSDKHRFLSQ 300

Query: 301 EGKT-SQLEFRDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERL 360
           EGKT SQLEF DVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERL
Sbjct: 301 EGKTASQLEFHDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERL 360

Query: 361 I---------------------------------------------------------FT 420
           I                                                          T
Sbjct: 361 ICLIKSLRAVNDASWHNTFLGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSITTLAVT 420

Query: 421 IIIEEEEGELKEEDECSPSKSRDEKQSSGKCRKGLIMSLQMLGEYESLLTPPQSVIAVAN 480
           IIIEEEEGELKEEDECSPSKSRDEKQSSGK R+GLI  LQMLGEYESLLTPPQSVI VAN
Sbjct: 421 IIIEEEEGELKEEDECSPSKSRDEKQSSGKRRQGLITCLQMLGEYESLLTPPQSVIEVAN 480

Query: 481 QAATKAVMFISGVAVGNEYYDCVSINDTPINCSGNMRHLIVEACISRNLLDTSAYFWPGY 540
           QAA KAVMFISGVAVGNE YDCVS+NDTPINCSGNMRHLIVEACISRNLLDTSAYFWPGY
Sbjct: 481 QAAAKAVMFISGVAVGNECYDCVSMNDTPINCSGNMRHLIVEACISRNLLDTSAYFWPGY 540

Query: 541 VNARSNQVPRSASSQVVGWSSFMKGSSLTPSMVNALVAAPASRYRNYVVQIKKLTNRFGE 600
           VN RS+QVPRSASSQ+VGWSSFMKGSSLTPSMVNALVA PAS                  
Sbjct: 541 VNTRSSQVPRSASSQIVGWSSFMKGSSLTPSMVNALVATPAS------------------ 600

Query: 601 VLEVIKIGKVMHTKSLKFPQKFISLKMVCCLHIYSNEGSKLTYKTVNLAVKTKTVLKQKL 660
                                                                       
Sbjct: 601 ------------------------------------------------------------ 660

Query: 661 KQRSKAHGFDGSLAEIEKIYEIAINGSGDETISAASILCGASLVRGWNLQEHTALFISRL 720
                      SLAEIEKIYEIAINGSGDE ISAASILCGASLVRGWNLQEHT LFISRL
Sbjct: 661 -----------SLAEIEKIYEIAINGSGDEKISAASILCGASLVRGWNLQEHTVLFISRL 720

Query: 721 LSPPIPADFSGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFG 780
           LSPPIPAD+ GSDSYLIDYAPFLN+LLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFG
Sbjct: 721 LSPPIPADYPGSDSYLIDYAPFLNILLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFG 780

Query: 781 SSPPKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDARPVGSQLTPEYLLL 840
           SS PKSWIL SGEELTCHAVFSLAFTLLLRLWRFHHPP+ENVKGDARPVGSQLTPEYLLL
Sbjct: 781 SSTPKSWILASGEELTCHAVFSLAFTLLLRLWRFHHPPIENVKGDARPVGSQLTPEYLLL 840

Query: 841 VRNSQLASFGKSPKDRLKARRLSKLLKFSLEPIFMDSFPKLKGWYRQHQECIASILSGLV 900
           VRNSQLASFGKSPKDRLK RRLSKLLKFSLEP FMDSFPKLKGWYRQHQECIASI  GLV
Sbjct: 841 VRNSQLASFGKSPKDRLKVRRLSKLLKFSLEPTFMDSFPKLKGWYRQHQECIASIPPGLV 895

Query: 901 PGAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSANEEASIKLKVPAWDILEAT 927
           PGAPVHQ VDALLTMMF+KINRGGQSLTSTTSGSSNSSGSANEEASIKLKVP+WDILEAT
Sbjct: 901 PGAPVHQTVDALLTMMFKKINRGGQSLTSTTSGSSNSSGSANEEASIKLKVPSWDILEAT 895

[Close]

BLAST of HG10011927.1 vs. ExPASy TrEMBL
Match: A0A1S4DXP9 (mediator of RNA polymerase II transcription subunit 33A-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491278 PE=4 SV=1)

HSP 1 Score: 1229.2 bits (3179), Expect = 0.0e+00
Identity = 658/845 (77.87%), Postives = 673/845 (79.64%), Query Frame = 0


Query: 139 MQTIDDVLHLTQIFGLQTCDPGVLMVELFFSIVWQLLDASLDDEGLLALPGEERSPWLIR 198
           MQTIDDVLHLTQIFGLQTC+PGVLMVELFFSIVWQLLDASLDDEGLLALPGEE+S WLIR
Sbjct: 1   MQTIDDVLHLTQIFGLQTCEPGVLMVELFFSIVWQLLDASLDDEGLLALPGEEKSAWLIR 60

Query: 199 PQPHDMELDVHDSFGEKRTENSESVLKVNTAKAIEIIGQFLQKKKTARILCLAHRNMPLH 258
           PQ HDMELDVHDSFGEK+TENSES+LKVNTAKAIEIIGQFLQ KKT RILCLA RNMPL 
Sbjct: 61  PQLHDMELDVHDSFGEKKTENSESLLKVNTAKAIEIIGQFLQNKKTERILCLALRNMPLQ 120

Query: 259 WAGFAQRLQLLAANSVVLRNTKLITPEVLLHWTSDKNRLLSREGKTSQLEFRDVMASGSL 318
           WAGFAQRLQLL ANSVVL N KLITPEVLLHWTSDKN+LLS++GKTSQLEFRDVM+SGSL
Sbjct: 121 WAGFAQRLQLLGANSVVLGNAKLITPEVLLHWTSDKNKLLSQKGKTSQLEFRDVMSSGSL 180

Query: 319 FSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLI------------------ 378
           FSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLI                  
Sbjct: 181 FSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLICLIKSLRAVNDTSWHNTF 240

Query: 379 ---------------------------------------FTIIIEEEEGELKEEDECSPS 438
                                                   TIIIEEEE E K ED+CSPS
Sbjct: 241 LGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSISTLAVTIIIEEEEVEPK-EDDCSPS 300

Query: 439 KSRDEKQSSGKCRKGLIMSLQMLGEYESLLTPPQSVIAVANQAATKAVMFISGVAVGNEY 498
           KSRDEKQSSG CRKGLI SLQMLGEYESLLTPPQS+IAVANQAA KAVMFISGVAVGNEY
Sbjct: 301 KSRDEKQSSGMCRKGLITSLQMLGEYESLLTPPQSIIAVANQAAAKAVMFISGVAVGNEY 360

Query: 499 YDCVSINDTPINCSGNMRHLIVEACISRNLLDTSAYFWPGYVNARSNQVPRSASSQVVGW 558
           YDC S+ND PINCSGNMRHLIVEACISRNLLDTSAYFWPGYVNA S+QVPRSAS+QVVGW
Sbjct: 361 YDCASMNDAPINCSGNMRHLIVEACISRNLLDTSAYFWPGYVNALSSQVPRSASNQVVGW 420

Query: 559 SSFMKGSSLTPSMVNALVAAPASRYRNYVVQIKKLTNRFGEVLEVIKIGKVMHTKSLKFP 618
           SSFMKGS LTPSMVNALVA PAS                                     
Sbjct: 421 SSFMKGSPLTPSMVNALVATPAS------------------------------------- 480

Query: 619 QKFISLKMVCCLHIYSNEGSKLTYKTVNLAVKTKTVLKQKLKQRSKAHGFDGSLAEIEKI 678
                                                               SLAEIEKI
Sbjct: 481 ----------------------------------------------------SLAEIEKI 540

Query: 679 YEIAINGSGDETISAASILCGASLVRGWNLQEHTALFISRLLSPPIPADFSGSDSYLIDY 738
           YEIAINGSGDE ISAASILCGASLVRGW LQEHTALFISRLL PPIP D+SGSDSYLIDY
Sbjct: 541 YEIAINGSGDEKISAASILCGASLVRGWYLQEHTALFISRLLLPPIPTDYSGSDSYLIDY 600

Query: 739 APFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFGSSPPKSWILTSGEELTCHA 798
           APFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFGSSPPKSWILTSGEELTCHA
Sbjct: 601 APFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFGSSPPKSWILTSGEELTCHA 660

Query: 799 VFSLAFTLLLRLWRFHHPPVENVKGDARPVGSQLTPEYLLLVRNSQLASFGKSPKDRLKA 858
           VFSLAFTLLLRLWRFHHPPVENVKGDARPVGSQLTPEYLLLVRNSQLASFGKSP DRLKA
Sbjct: 661 VFSLAFTLLLRLWRFHHPPVENVKGDARPVGSQLTPEYLLLVRNSQLASFGKSPNDRLKA 720

Query: 859 RRLSKLLKFSLEPIFMDSFPKLKGWYRQHQECIASILSGLVPGAPVHQIVDALLTMMFRK 918
           RRLSKLLKFSL+PIFMDSFPKLKGWYRQHQECIASILSGLVPGAPVHQIVDALLTMMFRK
Sbjct: 721 RRLSKLLKFSLQPIFMDSFPKLKGWYRQHQECIASILSGLVPGAPVHQIVDALLTMMFRK 755

Query: 919 INRGGQSLTSTTSGSSNSSGSANEEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPR 927
           INRGGQSLTSTTSGSSNSSGSANEEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPR
Sbjct: 781 INRGGQSLTSTTSGSSNSSGSANEEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPR 755

[Close]

BLAST of HG10011927.1 vs. TAIR 10
Match: AT3G23590.1 (REF4-related 1 )

HSP 1 Score: 791.2 bits (2042), Expect = 9.1e-229
Identity = 440/953 (46.17%), Postives = 589/953 (61.80%), Query Frame = 0


Query: 17  LWDSVLELTKSAQDKNCDPLLWAVQLSSTLSSAGVSLPSVELAQLLVSHICWDNHVPIMW 76
           +WD V+ELTK AQ+   DP LWA QLSS L    V LPS ELA+++VS+ICWDN+VPI+W
Sbjct: 9   VWDCVIELTKMAQENCVDPRLWASQLSSNLKFFAVELPSTELAEVIVSYICWDNNVPIVW 68

Query: 77  KFLEKAMTARIVPPLLVIVLLSTRAIPYRKLRPAAYRLYLELLSRHVFSLSSQINGPNYQ 136
           KFLE+AM  ++V PL+V+ LL+ R +P R  + AAYR+YLELL R++F++   I+GP+YQ
Sbjct: 69  KFLERAMALKLVSPLVVLALLADRVVPTRSTQQAAYRIYLELLKRNMFTIKDHISGPHYQ 128

Query: 137 RIMQTIDDVLHLTQIFGLQTCDPGVLMVELFFSIVWQLLDASLDDEGLLALPGEERSPWL 196
           ++M ++ ++L L+++F L T  PGVL+VE  F +V QLLDA+L DEGLL L  +  S WL
Sbjct: 129 KVMISVSNILRLSELFDLDTSKPGVLLVEFVFKMVSQLLDAALSDEGLLELSQDSSSQWL 188

Query: 197 IRPQPHDMELDVHDSFGEKRTENSESVLKVNTAKAIEIIGQFLQKKKTARILCLAHRNMP 256
           ++ Q  DME+D  + + EK T + E +  +NT  AIE+I +FL+    AR+L L   N  
Sbjct: 189 VKSQ--DMEIDAPERYNEK-TGSLEKLQSLNTIMAIELIAEFLRNTVIARLLYLVSSNRA 248

Query: 257 LHWAGFAQRLQLLAANSVVLRNTKLITPEVLLHWTSDKNRLLSREGK-TSQLEFRDVMAS 316
             W  F Q++QLL  NS  L+++K++    LL   S++    S + K TS  +   ++  
Sbjct: 249 SKWHEFVQKVQLLGENSSALKHSKVLNSGDLLQLISNRRFGYSYDSKVTSARKSNAIVDF 308

Query: 317 GSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLI-FTIIIEEEEGEL-- 376
           GSL S AG  HG + S+LWLP+DL  EDAMDG QV  TSA+E +      ++E  G    
Sbjct: 309 GSLSSYAGLCHGASLSSLWLPLDLVFEDAMDGYQVNPTSAIEIITGLAKTLKEINGSTWH 368

Query: 377 ---------------KEEDEC-SPSKSRDEKQSSGKC----------------------R 436
                          +E D    P    D +     C                      R
Sbjct: 369 DTFLGLWIAALRLVQRERDPIEGPIPRLDTRLCMSLCIVPLVVANLIEEGKYESVMEKLR 428

Query: 437 KGLIMSLQMLGEYESLLTPPQSVIAVANQAATKAVMFISGVAVGNEYYDCVSINDTPINC 496
             L+ SLQ+LG++  LL PP+ V++ AN+AATKA++F+SG  VG   +D +++ D P+NC
Sbjct: 429 DDLVTSLQVLGDFPGLLAPPKCVVSAANKAATKAILFLSGGNVGKSCFDVINMKDMPVNC 488

Query: 497 SGNMRHLIVEACISRNLLDTSAYFWPGYVNARSNQVPRSASSQVVGWSSFMKGSSLTPSM 556
           SGNMRHLIVEACI+RN+LD SAY WPGYVN R NQ+P+S  ++V  WSSF+KG+ L  +M
Sbjct: 489 SGNMRHLIVEACIARNILDMSAYSWPGYVNGRINQIPQSLPNEVPCWSSFVKGAPLNAAM 548

Query: 557 VNALVAAPASRYRNYVVQIKKLTNRFGEVLEVIKIGKVMHTKSLKFPQKFISLKMVCCLH 616
           VN LV+ PAS                                                  
Sbjct: 549 VNTLVSVPAS-------------------------------------------------- 608

Query: 617 IYSNEGSKLTYKTVNLAVKTKTVLKQKLKQRSKAHGFDGSLAEIEKIYEIAINGSGDETI 676
                                                  SLAE+EK++E+A+ GS DE I
Sbjct: 609 ---------------------------------------SLAELEKLFEVAVKGSDDEKI 668

Query: 677 SAASILCGASLVRGWNLQEHTALFISRLLSPPIPADFSGSDSYLIDYAPFLNVLLVGISS 736
           SAA++LCGASL RGWN+QEHT  +++RLLSPP+PAD+S ++++LI YA  LNV++VGI S
Sbjct: 669 SAATVLCGASLTRGWNIQEHTVEYLTRLLSPPVPADYSRAENHLIGYACMLNVVIVGIGS 728

Query: 737 VDCVQIFSLHGMVPLLAGQLMPICEAFGS-SPPKSWILTSGEELTCHAVFSLAFTLLLRL 796
           VD +QIFSLHGMVP LA  LMPICE FGS +P  SW L SGE ++ ++VFS AFTLLL+L
Sbjct: 729 VDSIQIFSLHGMVPQLACSLMPICEEFGSYTPSVSWTLPSGEAISAYSVFSNAFTLLLKL 788

Query: 797 WRFHHPPVENVKGDARPVGSQLTPEYLLLVRNSQLASFGKSPKDRLKARRLSKLLKFSLE 856
           WRF+HPP+E+  GD   VGSQLTPE+LL VRNS L S     +DR + R        S +
Sbjct: 789 WRFNHPPIEHGVGDVPTVGSQLTPEHLLSVRNSYLVSSEILDRDRNRKRLSEVARAASCQ 848

Query: 857 PIFMDSFPKLKGWYRQHQECIASILSGLVPGAPVHQIVDALLTMMFRKINRGGQSLTSTT 916
           P+F+DSFPKLK WYRQHQ CIA+ LSGL  G+PVHQ V+ALL M F K+ RG Q+L    
Sbjct: 849 PVFVDSFPKLKVWYRQHQRCIAATLSGLTHGSPVHQTVEALLNMTFGKV-RGSQTLNPVN 868

Query: 917 SGSSNSSGSANEEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPRDLATG 927
           SG+S+SSG+A+E+++I+ + PAWDIL+A P+V+DAALTAC HGRLSPR LATG
Sbjct: 909 SGTSSSSGAASEDSNIRPEFPAWDILKAVPYVVDAALTACTHGRLSPRQLATG 868

[Close]

BLAST of HG10011927.1 vs. TAIR 10
Match: AT2G48110.1 (reduced epidermal fluorescence 4 )

HSP 1 Score: 751.9 bits (1940), Expect = 6.1e-217
Identity = 455/988 (46.05%), Postives = 557/988 (56.38%), Query Frame = 0


Query: 17  LWDSVLELTKSAQDKNCDPLLWAVQLSSTLSSAGVSLPSVELAQLLVSHICWDNHVPIMW 76
           LW+SV  L +SAQ+KN DPL WA+QL  TL+SAG+SLPS +LAQ LV+HI W+NH P+ W
Sbjct: 10  LWESVTSLIRSAQEKNVDPLHWALQLRLTLASAGISLPSPDLAQFLVTHIFWENHSPLSW 69

Query: 77  KFLEKAMTARIVPPLLVIVLLSTRAIPYRKLRPAAYRLYLELLSRHVFSLSSQINGPNYQ 136
           K LEKA++  IVPPLLV+ LLS R IP RKL PAAYRLY+ELL RH FS    I  P Y 
Sbjct: 70  KLLEKAISVNIVPPLLVLALLSPRVIPNRKLHPAAYRLYMELLKRHAFSFMPLIRAPGYH 129

Query: 137 RIMQTIDDVLHLTQIFGLQTCDPGVLMVELFFSIVWQLLDASLDDEGLLALPGEERSPWL 196
           + M +IDD+LHL++ FG+Q  +PG +++   FSIVW+LLDASLD+EGLL L   +RS W 
Sbjct: 130 KTMNSIDDILHLSETFGVQDQEPGSILLAFVFSIVWELLDASLDEEGLLELTSNKRSKW- 189

Query: 197 IRPQPHDMELDVHDSFGEKRTENSESVLKVNTAKAIEIIGQFLQKKKTARILCLAHRNMP 256
               PHDM+LD  ++   KR EN +++ K NT  AIE+I +FLQ K T+RIL LA +NM 
Sbjct: 190 -PSSPHDMDLDGLEN-SVKRNENHDALEKANTEMAIELIQEFLQNKVTSRILHLASQNM- 249

Query: 257 LHWAGFAQRLQLLAANSVVLRNTKLITPEVLLHWTSDKNRLLSREGKT-SQLEFRDVMAS 316
                                                       E KT  + EF  +++S
Sbjct: 250 --------------------------------------------ESKTIPRGEFHAIVSS 309

Query: 317 GSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLIFTI------------ 376
           GS  +          SALWLPIDLF ED MDG+Q  A SAVE L   +            
Sbjct: 310 GSKLALTSD------SALWLPIDLFFEDIMDGTQAAAASAVENLTGLVKALQAANSTSWH 369

Query: 377 ------------------------------------------------------------ 436
                                                                       
Sbjct: 370 DAFLALWLAALRLVQRENLCLRYCFFMHMLEILSEERDPIEGPVPRTDTFLCVLLSVTPL 429

Query: 437 ----IIEEEEGELKEEDECSPSKSRDEKQSSGKCRKGLIMSLQMLGEYESLLTPPQSVIA 496
               IIEEEE +  ++   SPS    EK+  GKCR+GLI SLQ LG+YESLLTPP+SV +
Sbjct: 430 AVANIIEEEESQWIDQTSSSPSNQWKEKK--GKCRQGLINSLQQLGDYESLLTPPRSVQS 489

Query: 497 VANQAATKAVMFISGVAVGNEYYDCVSINDTPINCSGNMRHLIVEACISRNLLDTSAYFW 556
           VANQAA KA+MFISG+   N  Y+  S++++   C           C  R  L T   F 
Sbjct: 490 VANQAAAKAIMFISGITNSNGSYENTSMSESASGC-----------CKVRFSLFTLKMFV 549

Query: 557 PGYVNARSNQVPRSASSQVVGWSSFMKGSSLTPSMVNALVAAPASRYRNYVVQIKKLTNR 616
              V    N         +  WS  MKGS LTPS+ N+L+  PAS               
Sbjct: 550 VMGVYLLCN---------ISCWSLVMKGSPLTPSLTNSLITTPAS--------------- 609

Query: 617 FGEVLEVIKIGKVMHTKSLKFPQKFISLKMVCCLHIYSNEGSKLTYKTVNLAVKTKTVLK 676
                                                                       
Sbjct: 610 ------------------------------------------------------------ 669

Query: 677 QKLKQRSKAHGFDGSLAEIEKIYEIAINGSGDETISAASILCGASLVRGWNLQEHTALFI 736
                         SLAEIEK+YE+A  GS DE I+ ASILCGASL RGW++QEH  +FI
Sbjct: 670 --------------SLAEIEKMYEVATTGSEDEKIAVASILCGASLFRGWSIQEHVIIFI 729

Query: 737 SRLLSPPIPADFSGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICE 796
             LLSPP PAD SGS S+LI+ APFLNVLLVGIS +DCV IFSLHG+VPLLAG LMPICE
Sbjct: 730 VTLLSPPAPADLSGSYSHLINSAPFLNVLLVGISPIDCVHIFSLHGVVPLLAGALMPICE 789

Query: 797 AFGSSPPK-SWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDARPVGSQLTPE 856
           AFGS  P  +W L +GE ++ HAVFS AFTLLLRLWRF HPP++ V GD  PVG Q +PE
Sbjct: 790 AFGSGVPNITWTLPTGELISSHAVFSTAFTLLLRLWRFDHPPLDYVLGDVPPVGPQPSPE 832

Query: 857 YLLLVRNSQLASFGKSPKDRLKARRLSKLLKFSLEPIFMDSFPKLKGWYRQHQECIASIL 916
           YLLLVRN +L  FGKSPKDR+  RR SK++  S++PIFMDSFP+LK WYRQHQEC+ASIL
Sbjct: 850 YLLLVRNCRLECFGKSPKDRMARRRFSKVIDISVDPIFMDSFPRLKQWYRQHQECMASIL 832

Query: 917 SGLVPGAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSANEEASIKLKVPAWDI 927
           S L  G+PVH IVD+LL+MMF+K N+GG    + +SGSS+ S S  +++S +LK+PAWDI
Sbjct: 910 SELKTGSPVHHIVDSLLSMMFKKANKGGSQSLTPSSGSSSLSTSGGDDSSDQLKLPAWDI 832

The following BLAST results are available for this feature:

BLAST of HG10011927.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038887593.1	0.0e+00	80.87	mediator of RNA polymerase II transcription subunit 33B isoform X1 [Benincasa hi...	[more]
XP_008449381.1	0.0e+00	80.06	PREDICTED: mediator of RNA polymerase II transcription subunit 33B-like isoform ...	[more]
XP_022155567.1	0.0e+00	79.15	mediator of RNA polymerase II transcription subunit 33B-like [Momordica charanti...	[more]
XP_023554812.1	0.0e+00	79.37	mediator of RNA polymerase II transcription subunit 33B-like [Cucurbita pepo sub...	[more]
XP_022963527.1	0.0e+00	79.37	mediator of RNA polymerase II transcription subunit 33B-like [Cucurbita moschata...	[more]

BLAST of HG10011927.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LUG9	1.3e-227	46.17	Mediator of RNA polymerase II transcription subunit 33A OS=Arabidopsis thaliana ...	[more]
F4IN69	8.6e-216	46.05	Mediator of RNA polymerase II transcription subunit 33B OS=Arabidopsis thaliana ...	[more]

BLAST of HG10011927.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BMJ1	0.0e+00	80.06	mediator of RNA polymerase II transcription subunit 33B-like isoform X1 OS=Cucum...	[more]
A0A6J1DPP9	0.0e+00	79.15	mediator of RNA polymerase II transcription subunit 33B-like OS=Momordica charan...	[more]
A0A6J1HFH4	0.0e+00	79.37	mediator of RNA polymerase II transcription subunit 33B-like OS=Cucurbita moscha...	[more]
A0A6J1HUY1	0.0e+00	78.66	mediator of RNA polymerase II transcription subunit 33B-like OS=Cucurbita maxima...	[more]
A0A1S4DXP9	0.0e+00	77.87	mediator of RNA polymerase II transcription subunit 33A-like isoform X2 OS=Cucum...	[more]

BLAST of HG10011927.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G23590.1	9.1e-229	46.17	REF4-related 1	[more]
AT2G48110.1	6.1e-217	46.05	reduced epidermal fluorescence 4	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 375..391
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 372..391
None	No IPR available	PANTHER	PTHR33739:SF11	MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 33A-LIKE	coord: 613..926 coord: 373..527
None	No IPR available	PANTHER	PTHR33739:SF11	MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 33A-LIKE	coord: 14..359
IPR039638	Mediator of RNA polymerase II transcription subunit 33A/B	PANTHER	PTHR33739	OS07G0681500 PROTEIN	coord: 613..926 coord: 373..527 coord: 14..359

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
HG10011927	HG10011927	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
HG10011927.1-cds	HG10011927.1-cds-Chr01:15477516..15478196	CDS
HG10011927.1-cds	HG10011927.1-cds-Chr01:15478646..15478807	CDS
HG10011927.1-cds	HG10011927.1-cds-Chr01:15478926..15479059	CDS
HG10011927.1-cds	HG10011927.1-cds-Chr01:15482445..15482692	CDS
HG10011927.1-cds	HG10011927.1-cds-Chr01:15482815..15483025	CDS
HG10011927.1-cds	HG10011927.1-cds-Chr01:15484651..15484932	CDS
HG10011927.1-cds	HG10011927.1-cds-Chr01:15485805..15486121	CDS
HG10011927.1-cds	HG10011927.1-cds-Chr01:15486383..15486736	CDS
HG10011927.1-cds	HG10011927.1-cds-Chr01:15487197..15487307	CDS
HG10011927.1-cds	HG10011927.1-cds-Chr01:15487848..15488146	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
HG10011927.1	HG10011927.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:2000762	regulation of phenylpropanoid metabolic process
cellular_component	GO:0016592	mediator complex
cellular_component	GO:0016021	integral component of membrane