Cucsat.G8872.T4 (mRNA) Cucumber (B10) v3

Overview
NameCucsat.G8872.T4
TypemRNA
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionPentatricopeptide repeat-containing protein
Locationctg1635: 856640 .. 859183 (-)
RNA-Seq ExpressionCucsat.G8872.T4
SyntenyCucsat.G8872.T4
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTATTCCTTTCCTCCCTTACTCATTTCCTTCCCCAAAATGGATCTTTCCAGAAAAACCCGCGTATGGTCAATGTAAGTGCGTGTTGTAACGCAATAAGAAGGGAGCGTGAGATTCGAAGAGGGTTGGATAACGAGAAGTGGAGGGTCTGGTCGAGAGAGGAGCCAAGTCATTTGAACAAAAGCTTCACAAGGAAAAAGGGGTTATCTATTACAAAACCCAACCACCCAAGTACTGAGATTTCAATTTTCAGCTCTTCAAGATTCATTGCTTTTCGAAGTCGAAGGGAGGTATTCGCTTTGCGATTGATTTCTCATTCACTGCATGTTATGGTTTTTTCAATCTATTTATCTTCTGCTTATAATTTCATTTGATTATACCGGGTTTTAGACGATTGAAGAAGTTCCTATAACATGGCGTTGATTTGAGAGTTCTGGTTCTGATATTAAATGCCAAAAAGAGAGCGATTCTTGTGAAGAAGTGGGATTTTACTGAGTTTCTTTCACTCAATGGCGACTCTGCTCAATACAGTTTCTCCAATTACAAACCCGTCACCAGAAACCACAAGAAGAGGATGTGGGTTCTTTTCCCATATCCCAAATATCCAGAAGCTCTCACTTAACAAGGGATTTTCTAAAGTTTTAGCATCAACCCAGATTACCATTTCTCCAAAGGACACCATTTTCACACTTCCAAATTGGAAGATTGGGAAACTTGATCAAAAGAGTAAAGAACTTAGACTTAATGATGCTTTTTTTCATTTAGAGTTCATGGTTGAGAAGGGGCAAAAGCCTGATGTATTTCAAGCAACTCAGTTATTGTATGATCTCTGTAAGACATGTAAGATGAGAAAAGCTATTAAGGTAATGGAGATGATGATTGGGTCTGGAATCATTCCAGATGCAGCATCTTATACCTTTTTGGTTAGTTCTTTGTGTAGAAAAGGGAATGTTGGTTATGCAATGCAACTAGTGGACAAAATGGAGGAATATGGTTATCCTACTAACACTGCTACTTATAATTCACTTGTGAGAGGGCTTTGTATGCATGGAAACTTGACTCAGAGCTTGCAACTTTTAGACAGATTAATTCAGAAGGGGTTGGTTCCTAATGCTTATACATACTCTTTTTTGCTTGAAGCTGCATACAAGGAAAGAGGAGCTGATGAAGCAAGTAAGCTTTTGGATGAGATAATTGCAAAGGGTGGGAAACCTAACTTGGTTAGCTACAATGTTTTGTTGACTGGGTTGTGCAAAGAAGGTAGGACAGAGGATGCCATGCAGTTATTTAGGGAATTGCCTTCTAAGGGATTCAGTCCAAATGTTGTCAGTTATAATATCTTGCTAAGGAGTTTGTGCAATGAAGGGAGGTGGGAAGAGGCAAATGTGCTTCTAGCTGAAATGGATGGCGATGAACGATCCCCTTCAACTGTCACTTACAATATATTGATTGGTTCACTTACTCTTCATGGCAGAACAGAACATGCTCTTGAGGTTTTGGAAGAGATGATTAGGGCACGATTCAAGCCAACAGCTTCTAGCTACAATCCGATAATTGCTCGTCTTTGCAAAGATAGGAAAGTAGATCTTGTTGTAAAGTGTCTGGACCAAATGATGTATAGGCATTGCAATCCGAATGAAGGAACATACAATGCCATTGCTACACTTTGTGAAGAGGGTATGGTTCAAGAAGCATTCTCCATTATACAGAGTTTGGGCAACAAGCAACATTTCTCTACTCAAGAATTCTATAAAATTGTTATTACCAGCCTGTGTCGTAAAGGAAACACATATCCAGCATTCCAGCTTCTCTATGAAATGACAAAGTATGGGTTTACACCCGATTCTTTTACCTATTCGTCTTTGATCCGAGGGTTATGCATGGAGGGTATGTTGAATGAGGCAATTGAAATATTCAGTGTAATGGAGGAAAATATCAAGCTTGATACTGAGAATTACAATTCACTCATTCTTGGTTGCTGCAAATCTCGAAGAACTGATTTGGCCTTGGACGTATTCGAAATAATGGTTGGTAAAGGTTATCTGGCCAATGAAACGACATACACCATTCTTGTGGAAGGTATCATCCATGAAAAAGAGATGGATCTAGCAACCGAAGTACTGAGAGAGTTGCAACTGAGGGATGTTATAAATCAAAGCACAGTGGAAAGACTTATAATGCAGTATGACTTAAATGAATTGCCATTGTGATAATTTCAGTTGACTTGCTACCAGCAATTGGAAACCTAGCAGACAGTTCATCATGAAGATCAAGTAATTGTTAGTATGACAAAGAGAAAAAAAAAAGTAAAGAAAAAGGTACTTCCACATCCGTCTCATCCCATATTTTGTTTGATCTTATTACTTTGTCTGACAACTGAAAGCTTGTGAATCTGACAAGAGGGTGCTGTTTTTTTTAGTTGCATTATTTACAACTGAGTACATGTTTTTTAGTTCACTAGGCTTCTTATATGTACATAAAATTACTCCATCCAGTTCTTTACTTTCTCTTTCTATTGAGTTTTTTTGCCCATCTGTGGCCAATT

Coding sequence (CDS)

ATGCAGTTATTTAGGGAATTGCCTTCTAAGGGATTCAGTCCAAATGTTGTCAGTTATAATATCTTGCTAAGGAGTTTGTGCAATGAAGGGAGGTGGGAAGAGGCAAATGTGCTTCTAGCTGAAATGGATGGCGATGAACGATCCCCTTCAACTGTCACTTACAATATATTGATTGGTTCACTTACTCTTCATGGCAGAACAGAACATGCTCTTGAGGTTTTGGAAGAGATGATTAGGGCACGATTCAAGCCAACAGCTTCTAGCTACAATCCGATAATTGCTCGTCTTTGCAAAGATAGGAAAGTAGATCTTGTTGTAAAGTGTCTGGACCAAATGATGTATAGGCATTGCAATCCGAATGAAGGAACATACAATGCCATTGCTACACTTTGTGAAGAGGGTATGGTTCAAGAAGCATTCTCCATTATACAGAGTTTGGGCAACAAGCAACATTTCTCTACTCAAGAATTCTATAAAATTGTTATTACCAGCCTGTGTCGTAAAGGAAACACATATCCAGCATTCCAGCTTCTCTATGAAATGACAAAGTATGGGTTTACACCCGATTCTTTTACCTATTCGTCTTTGATCCGAGGGTTATGCATGGAGGGTATGTTGAATGAGGCAATTGAAATATTCAGTGTAATGGAGGAAAATATCAAGCTTGATACTGAGAATTACAATTCACTCATTCTTGGTTGCTGCAAATCTCGAAGAACTGATTTGGCCTTGGACGTATTCGAAATAATGGTTGGTAAAGGTTATCTGGCCAATGAAACGACATACACCATTCTTGTGGAAGGTATCATCCATGAAAAAGAGATGGATCTAGCAACCGAAGTACTGAGAGAGTTGCAACTGAGGGATGTTATAAATCAAAGCACAGTGGAAAGACTTATAATGCAGTATGACTTAAATGAATTGCCATTGTGA

Protein sequence

MQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENIKLDTENYNSLILGCCKSRRTDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLRELQLRDVINQSTVERLIMQYDLNELPL
Homology
BLAST of Cucsat.G8872.T4 vs. ExPASy Swiss-Prot
Match: A3KPF8 (Pentatricopeptide repeat-containing protein At1g79080, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g79080 PE=2 SV=1)

HSP 1 Score: 416.0 bits (1068), Expect = 3.7e-115
Identity = 209/311 (67.20%), Postives = 251/311 (80.71%), Query Frame = 0

Query: 1   MQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGS 60
           M LFRELP+KGF  NVVSYNILLR LC +GRWEEAN LLAEMDG +R+PS VTYNILI S
Sbjct: 266 MALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINS 325

Query: 61  LTLHGRTEHALEVLEEMIRA--RFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCN 120
           L  HGRTE AL+VL+EM +   +F+ TA+SYNP+IARLCK+ KVDLVVKCLD+M+YR C 
Sbjct: 326 LAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCK 385

Query: 121 PNEGTYNAIATLCE-EGMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQL 180
           PNEGTYNAI +LCE    VQEAF IIQSL NKQ   T +FYK VITSLCRKGNT+ AFQL
Sbjct: 386 PNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQL 445

Query: 181 LYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVME--ENIKLDTENYNSLILGCC 240
           LYEMT+ GF PD+ TYS+LIRGLC+EGM   A+E+ S+ME  EN K   +N+N++ILG C
Sbjct: 446 LYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLC 505

Query: 241 KSRRTDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLRELQLRDVINQST 300
           K RRTDLA++VFE+MV K  + NETTY ILVEGI HE E++LA EVL EL+LR VI Q+ 
Sbjct: 506 KIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDELRLRKVIGQNA 565

Query: 301 VERLIMQYDLN 307
           V+R++MQ++L+
Sbjct: 566 VDRIVMQFNLD 576

BLAST of Cucsat.G8872.T4 vs. ExPASy Swiss-Prot
Match: Q3EDF8 (Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX=3702 GN=At1g09900 PE=2 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 3.2e-58
Identity = 120/301 (39.87%), Postives = 186/301 (61.79%), Query Frame = 0

Query: 1   MQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGS 60
           ++   ++PS G  PNV+++NI+LRS+C+ GRW +A  LLA+M     SPS VT+NILI  
Sbjct: 294 IKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINF 353

Query: 61  LTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPN 120
           L   G    A+++LE+M +   +P + SYNP++   CK++K+D  ++ L++M+ R C P+
Sbjct: 354 LCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPD 413

Query: 121 EGTYNAIAT-LCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLLY 180
             TYN + T LC++G V++A  I+  L +K        Y  VI  L + G T  A +LL 
Sbjct: 414 IVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLD 473

Query: 181 EMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEE-NIKLDTENYNSLILGCCKSR 240
           EM      PD+ TYSSL+ GL  EG ++EAI+ F   E   I+ +   +NS++LG CKSR
Sbjct: 474 EMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSR 533

Query: 241 RTDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLRELQLRDVINQSTVER 300
           +TD A+D    M+ +G   NET+YTIL+EG+ +E     A E+L EL  + ++ +S+ E+
Sbjct: 534 QTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKSSAEQ 593

BLAST of Cucsat.G8872.T4 vs. ExPASy Swiss-Prot
Match: Q9SR00 (Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g04760 PE=2 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 2.9e-51
Identity = 112/306 (36.60%), Postives = 171/306 (55.88%), Query Frame = 0

Query: 2   QLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGSL 61
           ++ R L  KG  P+V+SYNILLR+L N+G+WEE   L+ +M  ++  P+ VTY+ILI +L
Sbjct: 284 EMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTL 343

Query: 62  TLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPNE 121
              G+ E A+ +L+ M      P A SY+P+IA  C++ ++D+ ++ L+ M+   C P+ 
Sbjct: 344 CRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDI 403

Query: 122 GTYNAI-ATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLLYE 181
             YN + ATLC+ G   +A  I   LG          Y  + ++L   G+   A  ++ E
Sbjct: 404 VNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILE 463

Query: 182 MTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEE-NIKLDTENYNSLILGCCKSRR 241
           M   G  PD  TY+S+I  LC EGM++EA E+   M           YN ++LG CK+ R
Sbjct: 464 MMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHR 523

Query: 242 TDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLRELQLRDVINQSTVERL 301
            + A++V E MVG G   NETTYT+L+EGI        A E+  +L   D I++ + +RL
Sbjct: 524 IEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAISEYSFKRL 583

Query: 302 IMQYDL 306
              + L
Sbjct: 584 HRTFPL 589

BLAST of Cucsat.G8872.T4 vs. ExPASy Swiss-Prot
Match: Q9FIX3 (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX=3702 GN=EMB2745 PE=2 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 2.3e-40
Identity = 99/302 (32.78%), Postives = 161/302 (53.31%), Query Frame = 0

Query: 2   QLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGSL 61
           +L R +  KG  PN++SYN+++  LC EGR +E + +L EM+    S   VTYN LI   
Sbjct: 261 KLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGY 320

Query: 62  TLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPNE 121
              G    AL +  EM+R    P+  +Y  +I  +CK   ++  ++ LDQM  R   PNE
Sbjct: 321 CKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNE 380

Query: 122 GTYNAIAT-LCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLLYE 181
            TY  +     ++G + EA+ +++ + +     +   Y  +I   C  G    A  +L +
Sbjct: 381 RTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLED 440

Query: 182 MTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEI-FSVMEENIKLDTENYNSLILGCCKSRR 241
           M + G +PD  +YS+++ G C    ++EA+ +   ++E+ IK DT  Y+SLI G C+ RR
Sbjct: 441 MKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRR 500

Query: 242 TDLALDVFEIMVGKGYLANETTYTILV-----EGIIHEKEMDLATEVLRELQLRDVINQS 297
           T  A D++E M+  G   +E TYT L+     EG + EK + L  E++ +  L DV+  S
Sbjct: 501 TKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDL-EKALQLHNEMVEKGVLPDVVTYS 560

BLAST of Cucsat.G8872.T4 vs. ExPASy Swiss-Prot
Match: Q9C8T7 (Pentatricopeptide repeat-containing protein At1g63330 OS=Arabidopsis thaliana OX=3702 GN=At1g63330 PE=2 SV=2)

HSP 1 Score: 161.0 bits (406), Expect = 2.2e-38
Identity = 87/288 (30.21%), Postives = 156/288 (54.17%), Query Frame = 0

Query: 1   MQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGS 60
           + LF+E+ +KG  PNVV+Y+ L+  LC+ GRW +A+ LL++M   + +P+ VT+N LI +
Sbjct: 205 LNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDA 264

Query: 61  LTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPN 120
               G+   A ++ ++MI+    P   +YN +I   C   ++D   +  + M+ + C P+
Sbjct: 265 FVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPD 324

Query: 121 EGTYNA-IATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLLY 180
             TYN  I   C+   V++   + + + ++        Y  +I  L   G+   A ++  
Sbjct: 325 LDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFK 384

Query: 181 EMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEEN-IKLDTENYNSLILGCCKSR 240
           +M   G  PD  TYS L+ GLC  G L +A+E+F  M+++ IKLD   Y ++I G CK+ 
Sbjct: 385 QMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAG 444

Query: 241 RTDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLRELQ 287
           + D   D+F  +  KG   N  TY  ++ G+  ++ +  A  +L++++
Sbjct: 445 KVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 492

BLAST of Cucsat.G8872.T4 vs. NCBI nr
Match: XP_011653982.1 (pentatricopeptide repeat-containing protein At1g79080, chloroplastic [Cucumis sativus] >KGN54942.1 hypothetical protein Csa_012601 [Cucumis sativus])

HSP 1 Score: 619 bits (1597), Expect = 1.22e-219
Identity = 309/310 (99.68%), Postives = 310/310 (100.00%), Query Frame = 0

Query: 1   MQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGS 60
           MQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGS
Sbjct: 257 MQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGS 316

Query: 61  LTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPN 120
           LTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPN
Sbjct: 317 LTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPN 376

Query: 121 EGTYNAIATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLLYE 180
           EGTYNAIATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLLYE
Sbjct: 377 EGTYNAIATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLLYE 436

Query: 181 MTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENIKLDTENYNSLILGCCKSRRT 240
           MTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENIKLDTENYNSLILGCCKSRRT
Sbjct: 437 MTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENIKLDTENYNSLILGCCKSRRT 496

Query: 241 DLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLRELQLRDVINQSTVERLI 300
           DLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLRELQLRDVINQSTVERL+
Sbjct: 497 DLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLRELQLRDVINQSTVERLV 556

Query: 301 MQYDLNELPL 310
           MQYDLNELPL
Sbjct: 557 MQYDLNELPL 566

BLAST of Cucsat.G8872.T4 vs. NCBI nr
Match: XP_008444287.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g79080, chloroplastic [Cucumis melo] >ADN33755.1 pentatricopeptide repeat-containing protein [Cucumis melo subsp. melo] >KAA0052323.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK01883.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 592 bits (1525), Expect = 1.08e-208
Identity = 295/310 (95.16%), Postives = 303/310 (97.74%), Query Frame = 0

Query: 1   MQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGS 60
           ++LFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEM+GDERSPSTVTYNILIGS
Sbjct: 257 IRLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMNGDERSPSTVTYNILIGS 316

Query: 61  LTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPN 120
           L LHGRTEHALEVLEEMIRARFKPTASSYNPIIA LCKD K+DLVVKCLDQMMYRHCNPN
Sbjct: 317 LALHGRTEHALEVLEEMIRARFKPTASSYNPIIAHLCKDGKLDLVVKCLDQMMYRHCNPN 376

Query: 121 EGTYNAIATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLLYE 180
           EGTYNAIATLCEEGMVQEAFSIIQSLGNKQH STQEFYKIVITSLCRKGNTYPAFQLLYE
Sbjct: 377 EGTYNAIATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITSLCRKGNTYPAFQLLYE 436

Query: 181 MTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENIKLDTENYNSLILGCCKSRRT 240
           MTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEEN K DTENYNSLILGCCKSRRT
Sbjct: 437 MTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENNKPDTENYNSLILGCCKSRRT 496

Query: 241 DLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLRELQLRDVINQSTVERLI 300
           DLALDVFEIMVGKGYL NETTYTILVEGIIHEKEMDLAT+VLRELQLRDVI+QST+ERL+
Sbjct: 497 DLALDVFEIMVGKGYLPNETTYTILVEGIIHEKEMDLATKVLRELQLRDVISQSTLERLV 556

Query: 301 MQYDLNELPL 310
           MQYDLNELPL
Sbjct: 557 MQYDLNELPL 566

BLAST of Cucsat.G8872.T4 vs. NCBI nr
Match: XP_038899825.1 (pentatricopeptide repeat-containing protein At1g79080, chloroplastic [Benincasa hispida])

HSP 1 Score: 583 bits (1503), Expect = 2.46e-205
Identity = 294/311 (94.53%), Postives = 302/311 (97.11%), Query Frame = 0

Query: 1   MQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGS 60
           +QLFRELPSKGFSPNVVSYNILLRSLC EGRWEEANVLLAEMDGDERSPS VTYNILIGS
Sbjct: 257 IQLFRELPSKGFSPNVVSYNILLRSLCYEGRWEEANVLLAEMDGDERSPSIVTYNILIGS 316

Query: 61  LTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPN 120
           LTL GRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPN
Sbjct: 317 LTLSGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPN 376

Query: 121 EGTYNAIATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLLYE 180
           EGTYNAIATLCEEGMVQEAFSIIQSLGNKQH STQEFYKIVITSLCRKGNTYPAFQLLYE
Sbjct: 377 EGTYNAIATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITSLCRKGNTYPAFQLLYE 436

Query: 181 MTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEEN-IKLDTENYNSLILGCCKSRR 240
           MTKYGFTPDSFTYSSLIRGLCMEGML+EAIEIFSVMEEN  K DTENYNSLILGCCKSRR
Sbjct: 437 MTKYGFTPDSFTYSSLIRGLCMEGMLDEAIEIFSVMEENNYKPDTENYNSLILGCCKSRR 496

Query: 241 TDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLRELQLRDVINQSTVERL 300
           TDLAL+VFEIMV KGYL NETTYTILVEGI+HEKE+DLAT+VLRELQLRDVI+QSTVERL
Sbjct: 497 TDLALEVFEIMVDKGYLPNETTYTILVEGIVHEKEIDLATKVLRELQLRDVISQSTVERL 556

Query: 301 IMQYDLNELPL 310
           +MQYDLNELPL
Sbjct: 557 VMQYDLNELPL 567

BLAST of Cucsat.G8872.T4 vs. NCBI nr
Match: XP_022141778.1 (pentatricopeptide repeat-containing protein At1g79080, chloroplastic [Momordica charantia])

HSP 1 Score: 565 bits (1455), Expect = 4.81e-198
Identity = 281/311 (90.35%), Postives = 299/311 (96.14%), Query Frame = 0

Query: 1   MQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGS 60
           +QLFRELPSKGFSPNVVS NILLRSLC EGRWEEAN LLAEMDGD+R+PS VTYNILIGS
Sbjct: 257 IQLFRELPSKGFSPNVVSCNILLRSLCYEGRWEEANELLAEMDGDDRAPSIVTYNILIGS 316

Query: 61  LTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPN 120
           LTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPN
Sbjct: 317 LTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPN 376

Query: 121 EGTYNAIATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLLYE 180
           EGTYNAIATLCEEGMVQEAFSIIQSLGN+Q  STQEFYK+V+TSLCRKGNTYPAFQLLYE
Sbjct: 377 EGTYNAIATLCEEGMVQEAFSIIQSLGNRQQSSTQEFYKMVVTSLCRKGNTYPAFQLLYE 436

Query: 181 MTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENI-KLDTENYNSLILGCCKSRR 240
           MTKYGFTPDSFTYSSLIRGLCMEGML+EAIEIFSVMEEN  K DTENYN+LILGCCKS+R
Sbjct: 437 MTKYGFTPDSFTYSSLIRGLCMEGMLDEAIEIFSVMEENCYKPDTENYNALILGCCKSQR 496

Query: 241 TDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLRELQLRDVINQSTVERL 300
           TDLAL+VFE+MV KGYL NETTYTILVEGIIHEKE+DLA +VL+ELQLRDVI+QSTV+RL
Sbjct: 497 TDLALEVFEVMVDKGYLPNETTYTILVEGIIHEKEIDLAAKVLKELQLRDVISQSTVDRL 556

Query: 301 IMQYDLNELPL 310
           +MQYDLN+LPL
Sbjct: 557 VMQYDLNDLPL 567

BLAST of Cucsat.G8872.T4 vs. NCBI nr
Match: KAG6607968.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037481.1 Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 558 bits (1438), Expect = 1.84e-195
Identity = 276/311 (88.75%), Postives = 294/311 (94.53%), Query Frame = 0

Query: 1   MQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGS 60
           +QLFRELPSKGF+PNVVSYNILLRSLC EGRWEEANVLLAEMDGD+R+PS VTYN LIGS
Sbjct: 257 IQLFRELPSKGFNPNVVSYNILLRSLCYEGRWEEANVLLAEMDGDDRAPSAVTYNTLIGS 316

Query: 61  LTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPN 120
           L  HGRTEHALEVLEEMIRARFKPTASSYNPIIARLC+D+KVDLVVKCLDQM+YRHCNPN
Sbjct: 317 LAFHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCRDKKVDLVVKCLDQMIYRHCNPN 376

Query: 121 EGTYNAIATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLLYE 180
           EGTYNAIATLCE GMVQEAFSI+QSLGNKQH+STQEFYK VITSLCRKGNTY AFQLLYE
Sbjct: 377 EGTYNAIATLCEVGMVQEAFSILQSLGNKQHYSTQEFYKSVITSLCRKGNTYSAFQLLYE 436

Query: 181 MTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEEN-IKLDTENYNSLILGCCKSRR 240
           MTKYGFTPDSF YSSLIRGLCMEGML+EAIEIFSVMEEN  K DTENYNSLI GCCKSRR
Sbjct: 437 MTKYGFTPDSFAYSSLIRGLCMEGMLDEAIEIFSVMEENNYKPDTENYNSLIFGCCKSRR 496

Query: 241 TDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLRELQLRDVINQSTVERL 300
           TDLAL+VFE MV KGYL NETTYT LVEGI+HEK++DLAT+VLRELQL+DVI+QSTVERL
Sbjct: 497 TDLALEVFETMVNKGYLPNETTYTTLVEGIVHEKQIDLATKVLRELQLKDVISQSTVERL 556

Query: 301 IMQYDLNELPL 310
           +MQYDLNELPL
Sbjct: 557 VMQYDLNELPL 567

BLAST of Cucsat.G8872.T4 vs. ExPASy TrEMBL
Match: A0A0A0L2W8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G613170 PE=4 SV=1)

HSP 1 Score: 619 bits (1597), Expect = 5.93e-220
Identity = 309/310 (99.68%), Postives = 310/310 (100.00%), Query Frame = 0

Query: 1   MQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGS 60
           MQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGS
Sbjct: 257 MQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGS 316

Query: 61  LTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPN 120
           LTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPN
Sbjct: 317 LTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPN 376

Query: 121 EGTYNAIATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLLYE 180
           EGTYNAIATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLLYE
Sbjct: 377 EGTYNAIATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLLYE 436

Query: 181 MTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENIKLDTENYNSLILGCCKSRRT 240
           MTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENIKLDTENYNSLILGCCKSRRT
Sbjct: 437 MTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENIKLDTENYNSLILGCCKSRRT 496

Query: 241 DLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLRELQLRDVINQSTVERLI 300
           DLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLRELQLRDVINQSTVERL+
Sbjct: 497 DLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLRELQLRDVINQSTVERLV 556

Query: 301 MQYDLNELPL 310
           MQYDLNELPL
Sbjct: 557 MQYDLNELPL 566

BLAST of Cucsat.G8872.T4 vs. ExPASy TrEMBL
Match: A0A5A7U8T1 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold113G001460 PE=4 SV=1)

HSP 1 Score: 592 bits (1525), Expect = 5.21e-209
Identity = 295/310 (95.16%), Postives = 303/310 (97.74%), Query Frame = 0

Query: 1   MQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGS 60
           ++LFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEM+GDERSPSTVTYNILIGS
Sbjct: 257 IRLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMNGDERSPSTVTYNILIGS 316

Query: 61  LTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPN 120
           L LHGRTEHALEVLEEMIRARFKPTASSYNPIIA LCKD K+DLVVKCLDQMMYRHCNPN
Sbjct: 317 LALHGRTEHALEVLEEMIRARFKPTASSYNPIIAHLCKDGKLDLVVKCLDQMMYRHCNPN 376

Query: 121 EGTYNAIATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLLYE 180
           EGTYNAIATLCEEGMVQEAFSIIQSLGNKQH STQEFYKIVITSLCRKGNTYPAFQLLYE
Sbjct: 377 EGTYNAIATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITSLCRKGNTYPAFQLLYE 436

Query: 181 MTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENIKLDTENYNSLILGCCKSRRT 240
           MTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEEN K DTENYNSLILGCCKSRRT
Sbjct: 437 MTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENNKPDTENYNSLILGCCKSRRT 496

Query: 241 DLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLRELQLRDVINQSTVERLI 300
           DLALDVFEIMVGKGYL NETTYTILVEGIIHEKEMDLAT+VLRELQLRDVI+QST+ERL+
Sbjct: 497 DLALDVFEIMVGKGYLPNETTYTILVEGIIHEKEMDLATKVLRELQLRDVISQSTLERLV 556

Query: 301 MQYDLNELPL 310
           MQYDLNELPL
Sbjct: 557 MQYDLNELPL 566

BLAST of Cucsat.G8872.T4 vs. ExPASy TrEMBL
Match: E5GBB3 (Pentatricopeptide repeat-containing protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 592 bits (1525), Expect = 5.21e-209
Identity = 295/310 (95.16%), Postives = 303/310 (97.74%), Query Frame = 0

Query: 1   MQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGS 60
           ++LFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEM+GDERSPSTVTYNILIGS
Sbjct: 257 IRLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMNGDERSPSTVTYNILIGS 316

Query: 61  LTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPN 120
           L LHGRTEHALEVLEEMIRARFKPTASSYNPIIA LCKD K+DLVVKCLDQMMYRHCNPN
Sbjct: 317 LALHGRTEHALEVLEEMIRARFKPTASSYNPIIAHLCKDGKLDLVVKCLDQMMYRHCNPN 376

Query: 121 EGTYNAIATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLLYE 180
           EGTYNAIATLCEEGMVQEAFSIIQSLGNKQH STQEFYKIVITSLCRKGNTYPAFQLLYE
Sbjct: 377 EGTYNAIATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITSLCRKGNTYPAFQLLYE 436

Query: 181 MTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENIKLDTENYNSLILGCCKSRRT 240
           MTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEEN K DTENYNSLILGCCKSRRT
Sbjct: 437 MTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENNKPDTENYNSLILGCCKSRRT 496

Query: 241 DLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLRELQLRDVINQSTVERLI 300
           DLALDVFEIMVGKGYL NETTYTILVEGIIHEKEMDLAT+VLRELQLRDVI+QST+ERL+
Sbjct: 497 DLALDVFEIMVGKGYLPNETTYTILVEGIIHEKEMDLATKVLRELQLRDVISQSTLERLV 556

Query: 301 MQYDLNELPL 310
           MQYDLNELPL
Sbjct: 557 MQYDLNELPL 566

BLAST of Cucsat.G8872.T4 vs. ExPASy TrEMBL
Match: A0A1S3BA04 (pentatricopeptide repeat-containing protein At1g79080, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103487653 PE=4 SV=1)

HSP 1 Score: 592 bits (1525), Expect = 5.21e-209
Identity = 295/310 (95.16%), Postives = 303/310 (97.74%), Query Frame = 0

Query: 1   MQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGS 60
           ++LFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEM+GDERSPSTVTYNILIGS
Sbjct: 257 IRLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMNGDERSPSTVTYNILIGS 316

Query: 61  LTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPN 120
           L LHGRTEHALEVLEEMIRARFKPTASSYNPIIA LCKD K+DLVVKCLDQMMYRHCNPN
Sbjct: 317 LALHGRTEHALEVLEEMIRARFKPTASSYNPIIAHLCKDGKLDLVVKCLDQMMYRHCNPN 376

Query: 121 EGTYNAIATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLLYE 180
           EGTYNAIATLCEEGMVQEAFSIIQSLGNKQH STQEFYKIVITSLCRKGNTYPAFQLLYE
Sbjct: 377 EGTYNAIATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITSLCRKGNTYPAFQLLYE 436

Query: 181 MTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENIKLDTENYNSLILGCCKSRRT 240
           MTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEEN K DTENYNSLILGCCKSRRT
Sbjct: 437 MTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENNKPDTENYNSLILGCCKSRRT 496

Query: 241 DLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLRELQLRDVINQSTVERLI 300
           DLALDVFEIMVGKGYL NETTYTILVEGIIHEKEMDLAT+VLRELQLRDVI+QST+ERL+
Sbjct: 497 DLALDVFEIMVGKGYLPNETTYTILVEGIIHEKEMDLATKVLRELQLRDVISQSTLERLV 556

Query: 301 MQYDLNELPL 310
           MQYDLNELPL
Sbjct: 557 MQYDLNELPL 566

BLAST of Cucsat.G8872.T4 vs. ExPASy TrEMBL
Match: A0A6J1CLJ3 (pentatricopeptide repeat-containing protein At1g79080, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111012056 PE=4 SV=1)

HSP 1 Score: 565 bits (1455), Expect = 2.33e-198
Identity = 281/311 (90.35%), Postives = 299/311 (96.14%), Query Frame = 0

Query: 1   MQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGS 60
           +QLFRELPSKGFSPNVVS NILLRSLC EGRWEEAN LLAEMDGD+R+PS VTYNILIGS
Sbjct: 257 IQLFRELPSKGFSPNVVSCNILLRSLCYEGRWEEANELLAEMDGDDRAPSIVTYNILIGS 316

Query: 61  LTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPN 120
           LTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPN
Sbjct: 317 LTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPN 376

Query: 121 EGTYNAIATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLLYE 180
           EGTYNAIATLCEEGMVQEAFSIIQSLGN+Q  STQEFYK+V+TSLCRKGNTYPAFQLLYE
Sbjct: 377 EGTYNAIATLCEEGMVQEAFSIIQSLGNRQQSSTQEFYKMVVTSLCRKGNTYPAFQLLYE 436

Query: 181 MTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENI-KLDTENYNSLILGCCKSRR 240
           MTKYGFTPDSFTYSSLIRGLCMEGML+EAIEIFSVMEEN  K DTENYN+LILGCCKS+R
Sbjct: 437 MTKYGFTPDSFTYSSLIRGLCMEGMLDEAIEIFSVMEENCYKPDTENYNALILGCCKSQR 496

Query: 241 TDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLRELQLRDVINQSTVERL 300
           TDLAL+VFE+MV KGYL NETTYTILVEGIIHEKE+DLA +VL+ELQLRDVI+QSTV+RL
Sbjct: 497 TDLALEVFEVMVDKGYLPNETTYTILVEGIIHEKEIDLAAKVLKELQLRDVISQSTVDRL 556

Query: 301 IMQYDLNELPL 310
           +MQYDLN+LPL
Sbjct: 557 VMQYDLNDLPL 567

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A3KPF83.7e-11567.20Pentatricopeptide repeat-containing protein At1g79080, chloroplastic OS=Arabidop... [more]
Q3EDF83.2e-5839.87Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX... [more]
Q9SR002.9e-5136.60Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidop... [more]
Q9FIX32.3e-4032.78Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX... [more]
Q9C8T72.2e-3830.21Pentatricopeptide repeat-containing protein At1g63330 OS=Arabidopsis thaliana OX... [more]
Match NameE-valueIdentityDescription
XP_011653982.11.22e-21999.68pentatricopeptide repeat-containing protein At1g79080, chloroplastic [Cucumis sa... [more]
XP_008444287.11.08e-20895.16PREDICTED: pentatricopeptide repeat-containing protein At1g79080, chloroplastic ... [more]
XP_038899825.12.46e-20594.53pentatricopeptide repeat-containing protein At1g79080, chloroplastic [Benincasa ... [more]
XP_022141778.14.81e-19890.35pentatricopeptide repeat-containing protein At1g79080, chloroplastic [Momordica ... [more]
KAG6607968.11.84e-19588.75Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... [more]
Match NameE-valueIdentityDescription
A0A0A0L2W85.93e-22099.68Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G613170 PE=4 SV=1[more]
A0A5A7U8T15.21e-20995.16Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
E5GBB35.21e-20995.16Pentatricopeptide repeat-containing protein OS=Cucumis melo subsp. melo OX=41267... [more]
A0A1S3BA045.21e-20995.16pentatricopeptide repeat-containing protein At1g79080, chloroplastic OS=Cucumis ... [more]
A0A6J1CLJ32.33e-19890.35pentatricopeptide repeat-containing protein At1g79080, chloroplastic OS=Momordic... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 88..121
e-value: 5.8E-5
score: 21.0
coord: 52..85
e-value: 8.0E-9
score: 33.1
coord: 17..49
e-value: 8.8E-7
score: 26.7
coord: 191..219
e-value: 1.0E-6
score: 26.5
coord: 158..190
e-value: 5.7E-4
score: 17.9
coord: 227..258
e-value: 3.2E-6
score: 25.0
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 84..126
e-value: 2.7E-8
score: 33.9
coord: 14..61
e-value: 2.5E-13
score: 50.0
coord: 223..268
e-value: 6.3E-10
score: 39.1
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 185..217
e-value: 1.4E-11
score: 43.9
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 223..257
score: 11.202506
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 50..84
score: 11.728648
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 189..219
score: 11.092894
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 85..119
score: 9.13082
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 154..188
score: 9.492543
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 15..49
score: 11.41077
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 1..129
e-value: 4.8E-34
score: 120.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 130..307
e-value: 1.8E-37
score: 131.4
NoneNo IPR availablePANTHERPTHR45613PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 1..308
NoneNo IPR availablePANTHERPTHR45613:SF297PPR CONTAINING PLANT-LIKE PROTEINcoord: 1..308

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cucsat.G8872Cucsat.G8872gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G8872.T4.E1Cucsat.G8872.T4.E1exon
Cucsat.G8872.T4.E2Cucsat.G8872.T4.E2exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G8872.T4.C1Cucsat.G8872.T4.C1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cucsat.G8872.T4Cucsat.G8872.T4-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
molecular_function GO:0003729 mRNA binding