Cucsat.G8687.T9 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G8687.T9
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	protein trichome birefringence-like 5
Location	ctg1558: 2348729 .. 2353362 (-)
RNA-Seq Expression	Cucsat.G8687.T9
Synteny	Cucsat.G8687.T9

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTTCTCAATTTCTCAATTTGCCCGTAAAATTGCCTATCATCAAACACTTGAGAGATACCTTAGCTTAGCGGGTTTGTTGTCCAAATCCAAACACTGTTCTTCCCTTTTTCACTACCATTTTGTGGATCACACTCTCAAGCCTTCCTCTCTCTGCTCCTTCAATGGCGTTTTCCTCTCTCCCTCATTACCGTTTTACCTTCGCTCCCATTTTCTTCCTCCTCTTCCTCTGTTCCTTCATCTTCTTCACCAAACGAAATGCCGACGTTTCCCTTTCTCTCTACCAAGACCTCTCTTCCCAATCCCCTTTCACCGTCTCTCTCGCCTCTCCTTCAATATCCGAGCCCCAGATCTCTTTTCCGGGTTCTGGGTCTGATTCCTCTGACATTGAGTCCTTAACGAACTCATCTGCCATACAAACAGAGACTTCTAATGATCAAATTGAGAATAAGTTGTCTGTTAATGTCGAAAATGGTTCGGTTTCTGATGGTCAAGCTGCTGCTTCTATGGTGGCTGATGATAGTCCGGATTTGTCAATGCAGGGGCTGAAGCAATGTGATCTTTACATGGGGACTTGGGTTAAAGATGAAGAACATTATCCGGTTTATAGATTGGGTTCTTGCCCTTATGTTGATGAGGCTTATGACTGTGGTAATAATGGGAGAGCTGATTCTGAGTACACGAAATGGCGATGGAAGCCTTATGGCTGTGATCTCCCGAGGTATATGCAACGTGTGTGGGTTTTGTTGGTCTTAATTTGGTCAGTTTTCTTAGATGGATTTGAGTGAATGTATCCTTCTTTGACTGCTCCATTGGATAGTAATAGGTTTTCATTAGCATTTTGTTAGATTACATAATATTAAATTTAGCTTTTGAGTCTTTCAAGAGTTTTCCTTAATTACTATAATATTAATTTTACCTTCATCCAACTTAAGCTAATCACCGAGCTTTTGCGTAATTGTTGTTTTTGAGGGATGAATATGAGGGATAGAATTCTTTCAAAAAGTCCCCACACATTTCCTTGTCTACCAGCCTTGGTAGTGTTGCCTTGTAAAAGAAATCTAAATTATGCCATTTATTTATTGGGTATTGGTGGGCTAAATTGCCTGATGCTTCAACATAACAATGGTCTTTTCTAGAAACACTCGAGGCTGTCTTTTTCACATACTGTATGGGATTTCTGTCAATTTGGAAGTTGGATTAATGCTTTTTTAACAATTACTTAGGTACTTGAGGCCCCAAAGAAGTTGAAGAGTCTCCCAAGGTGTACACATAAAGCTAGTTGGAGAATTGTGGGATCTTAATATTCTTTTTGTTGTCTACTTTTGGAGTTAGCCCCAAGGAGTGGGCGTTTTCCTCTCCTATTTTTGTTTGTGTGGGTTTCCTATACCTTGAGTTCGTTAGCTGACTATCTTCTCTCCTTTGATTTTGTAATTATGTTTGTTTGACTTCATGCTTTAGTTCTGATTAGAAAAACAAAAACAAGCGATTGAGTATTTTACAGTCAAGTAGATATTTCATGTATACTAAGAAAAGTATCATCTTTTCACTTGGAGCTCAGATTTAATGCAACAGACTTTTTGGTGAGACTGAGAGGGAAAAGATTGATGCTCGTTGGAGATTCTATGAACAGAAACCAGTTTGAGTCAATCCTTTGTCTCCTTAGAGAAGGCCTTCAAGATAAGAATAGAATGTTTGAGACCCACGGGTATAAAATTACCAAGGGAAGAGGTTACTTCGTTTTCAAGTTTAAGGTAATAAAAGAATTGCAATGATATTACTACTGCGGTTAATATAGATTCCTTCACATGAATATAACTTCTTTGGCAGGGTGTCTTGTGTTAGATTAAAACTTTGTGTGATAGAGGTCTTCATATTCAAGAGGAAAATAGTTCACGATGACTTTTTGCAAGATATGACTTTCAGTTTTCATCTAGTAGACACCGTTTAGTTTGGTGAAACGGTTTGTTTGTATATGTTAGATCATTAAACCACTTATAAAGGCAAGAGTGTTCTCGAGTTCCAGTCTGCTTGTTTTTATCTATCTTATTATGAAAAAATATATTTTAGAGGGATGGTTGTTGGCACCATAATTAGAAAATATTTTCTTACATGCTTTTATTCTTGAACGGTTCTATTGCAATAAAAAAGTACTGCCTGTTCGTTTAGTTCAGCTTTTGCAGCTACTGGTAACTGGTAAGTAAATAACTAATTCAATTAACATTTGGCAGGATTATGACTGTACTGTCGAATTTGTGAGATCACATTTTCTTGTGAGGGAAGGAGTTCGTATAAATGCTCAAGGAAACTCAAATCCGACTCTATCTATAGATCGAATTGACAAGACTTCTGGACGCTGGAAGCGCGCTGACATTCTTGTGTTTAATACTGGCCACTGGTGGACTCATGGAAAGACCGCTCGTGGGTAAGGATTTAATTTCTAATTGCATAAAGAATACCCTGGATGGATTTTACCTTACATTCTCACAGAAACGAGAAAGATTTTGTGTTTGCTAACAAATTGACAAACGCAACACTGAATTGCAATGAAATAGACTACGATGAGTTTTTTAATTCTTCAAAAATTTTAAAAAACTTTTGCATCTTATTTTACTAAATTTCCATGCTTATTCTATTTACATACAATCTTTAAATATTTGATTTTAGTTAAACTTTGAATTACAATCATTTTGGTCCTTGTTCTTAATTTTATTTAATACATTATTTAACGGAAACCTAACACATGCATGTCTTTTGTTTAGATAAATATGTCTAGTGTGGATCAATATTTTAAACTACATGATGAAGTTTTAGGGTTTTTTTTTCCCTTTTTTGTAAAGAAATTATTATAAGAAACAAATTTAATTGATGTAAAATTTACAAAAAAAAAAAGAAACTGAAAGTGAAGGCCAAACCAATGGAGTTACAAAAGAGTTCTCCTATTGGTCAAAAGATAGGATAGATGGTTAGAACTATAGAAAGATGTACATTTACACCAAATCATAGCATGGAAGATAATGAGCTCAAAATAATTAGCATAAGGTTCAAAACAAGGAAAATTGATACACATTACTAAAATAACTTTTTGTACAAAATTTAAGAACCAAAACAAAATATTTGAAACTGAGGAATCTTTGTAGAATGTTTAAAAGAGATAAATAATCTAGATTGCATAAAATATAGAGACCAAATAAGGCTAATCAAACTTTGTATGAGAACTAATTTGATTCTTTAGTTTAGTTTACTGATACAGTTTGATGATGCAGGAAAAATTATTATAAAGAAGGTGAGGTTCTCTACCCGCAGTTCGATGCTGTTGAGGCTTACAGACGAGCGCTCAAGACATGGGGAAACTGGATCGATAATAATATAAATCCAGCTAAGCAGTTAGTCTTCTATAGAGGATATTCTTCCGCTCATTTCAGGTACAAATTTCATTCCCTTTTCTTTTGAAATAGCTTTGTGTATATATGTCAATATATGTTGATGAGCTGGAAAGATAGGGTGGAGAAAGTTTGTTGGAGATTATACCGTGAAAATTGACAAAGTAATCAACCATTCTTACAAAGTTCTTAAGAATATCTTTAACATTAAATATAGACCTAACCTATCGGCATAAACATAAGTTGCAATTTTATGTAGTATCTAGAGGTCAGTTTGTATTGTTTCTTTTTCACTTTTTTGGTTTTATCTAAACTTTCATTCGAAGAGGAATCTTATATACAAGATTAATATACTCACTGTAACCATTCAACACAAGTTTTTTGGTTCAAGGGTCTTTCACTTTGAATGACTAATGAATGGATTTAGTTATTTATTCCTCAATAAAATATTCATGTTTAAAAAAGATTTCTGTTCACAAGGGATAGAAAATTCCGTGTCTACTTTTACATTTATATGTTGAACTTTGCAAAACAGAGGTGGAGATTGGGATTCAGGAGGGTCATGCAATGGTGAAACTGAACCAGTCTTAAGTGGTGCCATCCTTGATAACTATCCTTTGAAAATGAAGATAGTTGAGGAAACCATTAAGGAAATGAGGGTTCCGGTCATACTTTTGAATGTCACAAGGTTAACCAATTTCCGCAAGGATGGTCACCCATCAATCTATGGTAAGAATCATACTGCTGCGAGAAAGGTCTCAACTAGACGGCAGGACTGCAGCCATTGGTGCCTCCCTGGGGTTCCTGATGCCTGGAATGAACTTATTTACGCTGCTTTAGTTTCTCGATCGATAAAATCCAAGTTCATCTAGCTGAGCAACAACAATATTCATTTCCTCATTTGGGAAATAATCAAGAAGGGTTTCCTTGGAGAAGTTTCCCTTGGTGAAGGCTACAGTCTGATTTGGCTGCCTTTTTGCATAGGCCAGCCGTAGCTCCTTGATTGTTAACCATTCCTTTTTGCTACCAACTGCTCCTAGCTCCTGTGTATAGAATCTCTTATATCTATATTATGCTTATCAGATTCGAAAAAAGATGCAATAGGTAGGGAGGCTTTCTGAAGATTTGTTTTGGTGTATTTTCATATATATTACAGATATGCAATATAGTTGGCAAAGTGATATTCATATGATAAATGATCAATTTTGTTGAATACACACCTCTCAAGTTCCAATTGTGCTCATGCTTGATA

Coding sequence (CDS)

ATGGCGTTTTCCTCTCTCCCTCATTACCGTTTTACCTTCGCTCCCATTTTCTTCCTCCTCTTCCTCTGTTCCTTCATCTTCTTCACCAAACGAAATGCCGACGTTTCCCTTTCTCTCTACCAAGACCTCTCTTCCCAATCCCCTTTCACCGTCTCTCTCGCCTCTCCTTCAATATCCGAGCCCCAGATCTCTTTTCCGGGTTCTGGGTCTGATTCCTCTGACATTGAGTCCTTAACGAACTCATCTGCCATACAAACAGAGACTTCTAATGATCAAATTGAGAATAAGTTGTCTGTTAATGTCGAAAATGGTTCGGTTTCTGATGGTCAAGCTGCTGCTTCTATGGTGGCTGATGATAGTCCGGATTTGTCAATGCAGGGGCTGAAGCAATGTGATCTTTACATGGGGACTTGGGTTAAAGATGAAGAACATTATCCGGTTTATAGATTGGGTTCTTGCCCTTATGTTGATGAGGCTTATGACTGTGGTAATAATGGGAGAGCTGATTCTGAGTACACGAAATGGCGATGGAAGCCTTATGGCTGTGATCTCCCGAGGTATATGCAACGTGTGTGGGTTTTGTTGGTCTTAATTTGGTCAGTTTTCTTAGATGGATTTGAGTGA

Protein sequence

MAFSSLPHYRFTFAPIFFLLFLCSFIFFTKRNADVSLSLYQDLSSQSPFTVSLASPSISEPQISFPGSGSDSSDIESLTNSSAIQTETSNDQIENKLSVNVENGSVSDGQAAASMVADDSPDLSMQGLKQCDLYMGTWVKDEEHYPVYRLGSCPYVDEAYDCGNNGRADSEYTKWRWKPYGCDLPRYMQRVWVLLVLIWSVFLDGFE

Homology

[Close]

BLAST of Cucsat.G8687.T9 vs. ExPASy Swiss-Prot
Match: F4K5K4 (Protein trichome birefringence-like 5 OS=Arabidopsis thaliana OX=3702 GN=TBL5 PE=2 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 3.7e-26
Identity = 67/180 (37.22%), Postives = 99/180 (55.00%), Query Frame = 0


Query: 16  IFFLLFLCSFIFFTKRNADVSLSLYQDLSSQSPFTVSLASPSISEPQISFPGSG-----S 75
           +F ++FLCS  FFT+R  + SLS Y       P  V L  P+   PQI  P  G     +
Sbjct: 20  LFIVIFLCSVFFFTRRTLEPSLSPYHTADIPLP-AVDLPPPTPLLPQIE-PHDGDVTVET 79

Query: 76  DSSDIESLTNSS---AIQTETSNDQIENKLSVNVENGSVSDGQAAASMVADDSPDLSMQG 135
           +  ++E         A++TE     +E+  +   E      G++   +  +      ++ 
Sbjct: 80  NPKEVEDSRRGGDDVAVETELKLKDVEDSHTEKTEEEEEGRGESPGEVSVESVEHAVIEK 139

Query: 136 LKQCDLYMGTWVKDEEHYPVYRLGSCPYVDEAYDCGNNGRADSEYTKWRWKPYGCDLPRY 188
           ++ CDLY G+WVK ++ YP+Y+ GSCPYVD+A+DC  NGR DS+Y  WRWKP GCDLPR+
Sbjct: 140 MRGCDLYKGSWVKGDDEYPLYQPGSCPYVDDAFDCQRNGRRDSDYLNWRWKPDGCDLPRF 197

[Close]

BLAST of Cucsat.G8687.T9 vs. ExPASy Swiss-Prot
Match: Q8VYR3 (Protein trichome birefringence-like 2 OS=Arabidopsis thaliana OX=3702 GN=TBL2 PE=2 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 2.2e-15
Identity = 53/175 (30.29%), Postives = 84/175 (48.00%), Query Frame = 0


Query: 45  SQSPFTVSLAS--PSISEPQISFPGSGSDSSDIESLTNSSAIQT-ETSNDQIENKLSVNV 104
           ++ P  V+L    P +  P    P +GS ++ +   +   +  + + S + ++N      
Sbjct: 72  NEKPEVVNLTDKVPDVKVPSFVVPDAGSKNTTLSEESKVPSFDSGQRSGETVKNSSLAEE 131

Query: 105 ENGSVSDGQ------------AAASMVAD-----------------DSPDLSMQGLKQCD 164
            NGSV+D Q             ++S+V+D                  + D S    + CD
Sbjct: 132 GNGSVADDQNTLEANATTSVGNSSSLVSDLGGRFVVPANTSKENGSVTEDRSRGSYEDCD 191

Query: 165 LYMGTWVK-DEEHYPVYRLGSCPYVDEAYDCGNNGRADSEYTKWRWKPYGCDLPR 187
           +Y G+WV+ D+E  P Y  GSCPY+D  ++C  NGR D  Y KWRW+P GCD+PR
Sbjct: 192 IYDGSWVRADDETMPYYPPGSCPYIDRDFNCHANGRPDDAYVKWRWQPNGCDIPR 246

[Close]

BLAST of Cucsat.G8687.T9 vs. ExPASy Swiss-Prot
Match: Q6DR10 (Protein trichome birefringence-like 43 OS=Arabidopsis thaliana OX=3702 GN=TBL43 PE=2 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 3.2e-14
Identity = 30/65 (46.15%), Postives = 47/65 (72.31%), Query Frame = 0


Query: 123 LSMQGLKQCDLYMGTWVKDEEHYPVYRLGSCPYVDEAYDCGNNGRADSEYTKWRWKPYGC 182
           L +   K C++Y G+WV D+  YP+Y   +CP+++  ++C +NGR DSEY K+RW+P GC
Sbjct: 35  LGLPPRKFCNIYQGSWVYDKS-YPLYDSKNCPFIERQFNCKSNGRPDSEYLKYRWQPSGC 94

Query: 183 DLPRY 188
           +LPR+
Sbjct: 95  NLPRF 98

[Close]

BLAST of Cucsat.G8687.T9 vs. ExPASy Swiss-Prot
Match: F4I037 (Protein trichome berefringence-like 7 OS=Arabidopsis thaliana OX=3702 GN=TBL7 PE=3 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 7.2e-14
Identity = 30/67 (44.78%), Postives = 44/67 (65.67%), Query Frame = 0


Query: 124 SMQGLKQCDLYMGTWVKDEEHYPVYRLGSCPYVDEAYDCGNNGRADSEYTKWRWKPYGCD 183
           S+ G  +CD++ G WV D ++YP+Y    CP+V++ ++C  NGR   EY KWRWKP  C 
Sbjct: 108 SVVGDTECDIFDGNWVVD-DNYPLYNASECPFVEKGFNCLGNGRGHDEYLKWRWKPKHCT 167

Query: 184 LPRYMQR 191
           +PR+  R
Sbjct: 168 VPRFEVR 173

[Close]

BLAST of Cucsat.G8687.T9 vs. ExPASy Swiss-Prot
Match: Q9LHL6 (Protein trichome birefringence-like 1 OS=Arabidopsis thaliana OX=3702 GN=TBL1 PE=2 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 8.0e-13
Identity = 29/62 (46.77%), Postives = 43/62 (69.35%), Query Frame = 0


Query: 125 MQGLKQCDLYMGTWVKDEEHYPVYRLGSCPYVDEAYDCGNNGRADSEYTKWRWKPYGCDL 184
           ++ LK C+ + G WVKD+  YP+Y+ GSC  +DE ++C +NGR D ++ K +WKP  C L
Sbjct: 190 IESLKSCEFFEGDWVKDDS-YPLYKPGSCNLIDEQFNCISNGRPDVDFQKLKWKPKQCSL 249

Query: 185 PR 187
           PR
Sbjct: 250 PR 250

[Close]

BLAST of Cucsat.G8687.T9 vs. NCBI nr
Match: XP_004150389.1 (protein trichome birefringence-like 5 [Cucumis sativus] >KGN61191.1 hypothetical protein Csa_006623 [Cucumis sativus])

HSP 1 Score: 370 bits (950), Expect = 1.72e-124
Identity = 186/187 (99.47%), Postives = 187/187 (100.00%), Query Frame = 0


Query: 1   MAFSSLPHYRFTFAPIFFLLFLCSFIFFTKRNADVSLSLYQDLSSQSPFTVSLASPSISE 60
           MAFSSLPHYRFTFAPIFFLLFLCSFIFFTKRNADVSLSLYQDLSSQSPFTVSLASPSISE
Sbjct: 1   MAFSSLPHYRFTFAPIFFLLFLCSFIFFTKRNADVSLSLYQDLSSQSPFTVSLASPSISE 60

Query: 61  PQISFPGSGSDSSDIESLTNSSAIQTETSNDQIENKLSVNVENGSVSDGQAAASMVADDS 120
           PQISFPGSGSDSSDIESLTNSSAIQTETSNDQIENKLSVNVENGSVSDGQAAASMVADDS
Sbjct: 61  PQISFPGSGSDSSDIESLTNSSAIQTETSNDQIENKLSVNVENGSVSDGQAAASMVADDS 120

Query: 121 PDLSMQGLKQCDLYMGTWVKDEEHYPVYRLGSCPYVDEAYDCGNNGRADSEYTKWRWKPY 180
           PDLSMQGLKQCDLYMGTWVKDEEHYPVYRLGSCPYVDEAYDCGNNGRADSEYTKWRWKPY
Sbjct: 121 PDLSMQGLKQCDLYMGTWVKDEEHYPVYRLGSCPYVDEAYDCGNNGRADSEYTKWRWKPY 180

Query: 181 GCDLPRY 187
           GCDLPR+
Sbjct: 181 GCDLPRF 187

[Close]

BLAST of Cucsat.G8687.T9 vs. NCBI nr
Match: XP_008450807.1 (PREDICTED: protein trichome birefringence-like 5 [Cucumis melo] >KAA0047563.1 protein trichome birefringence-like 5 [Cucumis melo var. makuwa] >TYK14960.1 protein trichome birefringence-like 5 [Cucumis melo var. makuwa])

HSP 1 Score: 329 bits (843), Expect = 2.92e-108
Identity = 167/190 (87.89%), Postives = 176/190 (92.63%), Query Frame = 0


Query: 1   MAFSSLPHYRFTFAPIFFLLFLCSFIFFTKRNADVSLSLYQDLSSQSPFTVSLASP---S 60
           MAFSSLP+YRFTFAPIFFLLFLCSFIFFTKRNADVSLSLYQDLSSQSPFTVSLA P   S
Sbjct: 1   MAFSSLPNYRFTFAPIFFLLFLCSFIFFTKRNADVSLSLYQDLSSQSPFTVSLAPPPPPS 60

Query: 61  ISEPQISFPGSGSDSSDIESLTNSSAIQTETSNDQIENKLSVNVENGSVSDGQAAASMVA 120
           +SEPQISFP SGS SSDIESLTN SA +TETSN QIENKLSVN ENGSV  G AAAS+VA
Sbjct: 61  VSEPQISFPDSGSGSSDIESLTNPSAQETETSNHQIENKLSVNGENGSVPHGVAAASIVA 120

Query: 121 DDSPDLSMQGLKQCDLYMGTWVKDEEHYPVYRLGSCPYVDEAYDCGNNGRADSEYTKWRW 180
           DD PDLSM+GLKQCDLYMGTWVKDEEHYP+Y++GSCPYVDEAYDCGNNGRADSEYTKWRW
Sbjct: 121 DDGPDLSMEGLKQCDLYMGTWVKDEEHYPIYKVGSCPYVDEAYDCGNNGRADSEYTKWRW 180

Query: 181 KPYGCDLPRY 187
           KPYGCDLPR+
Sbjct: 181 KPYGCDLPRF 190

[Close]

BLAST of Cucsat.G8687.T9 vs. NCBI nr
Match: XP_038891165.1 (protein trichome birefringence-like 5 [Benincasa hispida])

HSP 1 Score: 323 bits (828), Expect = 2.13e-105
Identity = 164/191 (85.86%), Postives = 176/191 (92.15%), Query Frame = 0


Query: 1   MAFSSLPHYRFTFAPIFFLLFLCSFIFFTKRNADVSLSLYQDLSSQSPFTVSLASPS--- 60
           MAFSSLP+YRF FAPIFFLLFLCSFIFFTKRNADVSLSLY+DLSSQ PFTVSLA PS   
Sbjct: 47  MAFSSLPNYRFAFAPIFFLLFLCSFIFFTKRNADVSLSLYKDLSSQPPFTVSLAPPSPPP 106

Query: 61  -ISEPQISFPGSGSDSSDIESLTNSSAIQTETSNDQIENKLSVNVENGSVSDGQAAASMV 120
            I+EPQ+SF  SGSDSSDIESLTN SA +T+ SND IE+KLSVN ENGSVSDG+AAASMV
Sbjct: 107 SIAEPQMSFSDSGSDSSDIESLTNPSAQETKISNDPIEDKLSVNGENGSVSDGEAAASMV 166

Query: 121 ADDSPDLSMQGLKQCDLYMGTWVKDEEHYPVYRLGSCPYVDEAYDCGNNGRADSEYTKWR 180
           ADD PDLS++GLKQCDLYMGTWVKDEEHYPVYR+GSCPYVDEAYDCGNNGRADSEYTKWR
Sbjct: 167 ADDGPDLSVEGLKQCDLYMGTWVKDEEHYPVYRVGSCPYVDEAYDCGNNGRADSEYTKWR 226

Query: 181 WKPYGCDLPRY 187
           WKPYGCDLPR+
Sbjct: 227 WKPYGCDLPRF 237

[Close]

BLAST of Cucsat.G8687.T9 vs. NCBI nr
Match: XP_022929595.1 (protein trichome birefringence-like 5 [Cucurbita moschata])

HSP 1 Score: 310 bits (794), Expect = 7.11e-101
Identity = 159/189 (84.13%), Postives = 170/189 (89.95%), Query Frame = 0


Query: 1   MAFSSLPHYRFTFAPIFFLLFLCSFIFFTKRNADVSLSLYQDLSSQSPFTVSLASPS-IS 60
           MAFSSLP+YRF FAPIFFLLFLCSFIFFTKRNADVS SLYQDLSSQ+PFTVSLA P  I+
Sbjct: 1   MAFSSLPNYRFAFAPIFFLLFLCSFIFFTKRNADVSFSLYQDLSSQTPFTVSLAPPPLIA 60

Query: 61  EPQISFPGSGSDSSDIESLTNSSAIQTETSNDQIENKLSVNVENGSVSDGQAAA-SMVAD 120
           EPQISFP SGSDSS IESL N SA +TE SNDQIE++LSVN ENGSVSDG  A  SM AD
Sbjct: 61  EPQISFPDSGSDSSGIESLANPSAQETEFSNDQIEDRLSVNGENGSVSDGDVAVGSMRAD 120

Query: 121 DSPDLSMQGLKQCDLYMGTWVKDEEHYPVYRLGSCPYVDEAYDCGNNGRADSEYTKWRWK 180
           D PDLS++GLKQCDLYMG+WVKDEEHYPVYR+GSCPYVDEAYDCGNNGR DSEYTKWRWK
Sbjct: 121 DGPDLSVEGLKQCDLYMGSWVKDEEHYPVYRVGSCPYVDEAYDCGNNGRNDSEYTKWRWK 180

Query: 181 PYGCDLPRY 187
           PYGCDLPR+
Sbjct: 181 PYGCDLPRF 189

[Close]

BLAST of Cucsat.G8687.T9 vs. NCBI nr
Match: XP_023545457.1 (protein trichome birefringence-like 5 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 309 bits (791), Expect = 2.01e-100
Identity = 159/189 (84.13%), Postives = 170/189 (89.95%), Query Frame = 0


Query: 1   MAFSSLPHYRFTFAPIFFLLFLCSFIFFTKRNADVSLSLYQDLSSQSPFTVSLASP-SIS 60
           MAFSSLP+YRF FAPIFFLLFLCSFIFFTKRNADVSL LYQDLSSQ+PFTVSLA P SI+
Sbjct: 1   MAFSSLPNYRFAFAPIFFLLFLCSFIFFTKRNADVSLFLYQDLSSQTPFTVSLAPPPSIA 60

Query: 61  EPQISFPGSGSDSSDIESLTNSSAIQTETSNDQIENKLSVNVENGSVSDGQAAA-SMVAD 120
           E QISFP SGSDSS IESLTN SA +TE SNDQIE++LSVN ENGSVSDG  A  SM  D
Sbjct: 61  ETQISFPDSGSDSSGIESLTNPSAQETEFSNDQIEDRLSVNGENGSVSDGDVAVGSMKVD 120

Query: 121 DSPDLSMQGLKQCDLYMGTWVKDEEHYPVYRLGSCPYVDEAYDCGNNGRADSEYTKWRWK 180
           D PDLS++GLKQCDLYMG+WVKDEEHYPVYR+GSCPYVDEAYDCGNNGR DSEYTKWRWK
Sbjct: 121 DGPDLSVEGLKQCDLYMGSWVKDEEHYPVYRVGSCPYVDEAYDCGNNGRNDSEYTKWRWK 180

Query: 181 PYGCDLPRY 187
           PYGCDLPR+
Sbjct: 181 PYGCDLPRF 189

[Close]

BLAST of Cucsat.G8687.T9 vs. ExPASy TrEMBL
Match: A0A0A0LMI5 (PMR5N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G062660 PE=3 SV=1)

HSP 1 Score: 370 bits (950), Expect = 8.35e-125
Identity = 186/187 (99.47%), Postives = 187/187 (100.00%), Query Frame = 0


Query: 1   MAFSSLPHYRFTFAPIFFLLFLCSFIFFTKRNADVSLSLYQDLSSQSPFTVSLASPSISE 60
           MAFSSLPHYRFTFAPIFFLLFLCSFIFFTKRNADVSLSLYQDLSSQSPFTVSLASPSISE
Sbjct: 1   MAFSSLPHYRFTFAPIFFLLFLCSFIFFTKRNADVSLSLYQDLSSQSPFTVSLASPSISE 60

Query: 61  PQISFPGSGSDSSDIESLTNSSAIQTETSNDQIENKLSVNVENGSVSDGQAAASMVADDS 120
           PQISFPGSGSDSSDIESLTNSSAIQTETSNDQIENKLSVNVENGSVSDGQAAASMVADDS
Sbjct: 61  PQISFPGSGSDSSDIESLTNSSAIQTETSNDQIENKLSVNVENGSVSDGQAAASMVADDS 120

Query: 121 PDLSMQGLKQCDLYMGTWVKDEEHYPVYRLGSCPYVDEAYDCGNNGRADSEYTKWRWKPY 180
           PDLSMQGLKQCDLYMGTWVKDEEHYPVYRLGSCPYVDEAYDCGNNGRADSEYTKWRWKPY
Sbjct: 121 PDLSMQGLKQCDLYMGTWVKDEEHYPVYRLGSCPYVDEAYDCGNNGRADSEYTKWRWKPY 180

Query: 181 GCDLPRY 187
           GCDLPR+
Sbjct: 181 GCDLPRF 187

[Close]

BLAST of Cucsat.G8687.T9 vs. ExPASy TrEMBL
Match: A0A5D3CU67 (Protein trichome birefringence-like 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2754G00100 PE=3 SV=1)

HSP 1 Score: 329 bits (843), Expect = 1.41e-108
Identity = 167/190 (87.89%), Postives = 176/190 (92.63%), Query Frame = 0


Query: 1   MAFSSLPHYRFTFAPIFFLLFLCSFIFFTKRNADVSLSLYQDLSSQSPFTVSLASP---S 60
           MAFSSLP+YRFTFAPIFFLLFLCSFIFFTKRNADVSLSLYQDLSSQSPFTVSLA P   S
Sbjct: 1   MAFSSLPNYRFTFAPIFFLLFLCSFIFFTKRNADVSLSLYQDLSSQSPFTVSLAPPPPPS 60

Query: 61  ISEPQISFPGSGSDSSDIESLTNSSAIQTETSNDQIENKLSVNVENGSVSDGQAAASMVA 120
           +SEPQISFP SGS SSDIESLTN SA +TETSN QIENKLSVN ENGSV  G AAAS+VA
Sbjct: 61  VSEPQISFPDSGSGSSDIESLTNPSAQETETSNHQIENKLSVNGENGSVPHGVAAASIVA 120

Query: 121 DDSPDLSMQGLKQCDLYMGTWVKDEEHYPVYRLGSCPYVDEAYDCGNNGRADSEYTKWRW 180
           DD PDLSM+GLKQCDLYMGTWVKDEEHYP+Y++GSCPYVDEAYDCGNNGRADSEYTKWRW
Sbjct: 121 DDGPDLSMEGLKQCDLYMGTWVKDEEHYPIYKVGSCPYVDEAYDCGNNGRADSEYTKWRW 180

Query: 181 KPYGCDLPRY 187
           KPYGCDLPR+
Sbjct: 181 KPYGCDLPRF 190

[Close]

BLAST of Cucsat.G8687.T9 vs. ExPASy TrEMBL
Match: A0A1S3BPH3 (protein trichome birefringence-like 5 OS=Cucumis melo OX=3656 GN=LOC103492279 PE=3 SV=1)

HSP 1 Score: 329 bits (843), Expect = 1.41e-108
Identity = 167/190 (87.89%), Postives = 176/190 (92.63%), Query Frame = 0


Query: 1   MAFSSLPHYRFTFAPIFFLLFLCSFIFFTKRNADVSLSLYQDLSSQSPFTVSLASP---S 60
           MAFSSLP+YRFTFAPIFFLLFLCSFIFFTKRNADVSLSLYQDLSSQSPFTVSLA P   S
Sbjct: 1   MAFSSLPNYRFTFAPIFFLLFLCSFIFFTKRNADVSLSLYQDLSSQSPFTVSLAPPPPPS 60

Query: 61  ISEPQISFPGSGSDSSDIESLTNSSAIQTETSNDQIENKLSVNVENGSVSDGQAAASMVA 120
           +SEPQISFP SGS SSDIESLTN SA +TETSN QIENKLSVN ENGSV  G AAAS+VA
Sbjct: 61  VSEPQISFPDSGSGSSDIESLTNPSAQETETSNHQIENKLSVNGENGSVPHGVAAASIVA 120

Query: 121 DDSPDLSMQGLKQCDLYMGTWVKDEEHYPVYRLGSCPYVDEAYDCGNNGRADSEYTKWRW 180
           DD PDLSM+GLKQCDLYMGTWVKDEEHYP+Y++GSCPYVDEAYDCGNNGRADSEYTKWRW
Sbjct: 121 DDGPDLSMEGLKQCDLYMGTWVKDEEHYPIYKVGSCPYVDEAYDCGNNGRADSEYTKWRW 180

Query: 181 KPYGCDLPRY 187
           KPYGCDLPR+
Sbjct: 181 KPYGCDLPRF 190

[Close]

BLAST of Cucsat.G8687.T9 vs. ExPASy TrEMBL
Match: A0A6J1EUT7 (protein trichome birefringence-like 5 OS=Cucurbita moschata OX=3662 GN=LOC111436132 PE=3 SV=1)

HSP 1 Score: 310 bits (794), Expect = 3.44e-101
Identity = 159/189 (84.13%), Postives = 170/189 (89.95%), Query Frame = 0


Query: 1   MAFSSLPHYRFTFAPIFFLLFLCSFIFFTKRNADVSLSLYQDLSSQSPFTVSLASPS-IS 60
           MAFSSLP+YRF FAPIFFLLFLCSFIFFTKRNADVS SLYQDLSSQ+PFTVSLA P  I+
Sbjct: 1   MAFSSLPNYRFAFAPIFFLLFLCSFIFFTKRNADVSFSLYQDLSSQTPFTVSLAPPPLIA 60

Query: 61  EPQISFPGSGSDSSDIESLTNSSAIQTETSNDQIENKLSVNVENGSVSDGQAAA-SMVAD 120
           EPQISFP SGSDSS IESL N SA +TE SNDQIE++LSVN ENGSVSDG  A  SM AD
Sbjct: 61  EPQISFPDSGSDSSGIESLANPSAQETEFSNDQIEDRLSVNGENGSVSDGDVAVGSMRAD 120

Query: 121 DSPDLSMQGLKQCDLYMGTWVKDEEHYPVYRLGSCPYVDEAYDCGNNGRADSEYTKWRWK 180
           D PDLS++GLKQCDLYMG+WVKDEEHYPVYR+GSCPYVDEAYDCGNNGR DSEYTKWRWK
Sbjct: 121 DGPDLSVEGLKQCDLYMGSWVKDEEHYPVYRVGSCPYVDEAYDCGNNGRNDSEYTKWRWK 180

Query: 181 PYGCDLPRY 187
           PYGCDLPR+
Sbjct: 181 PYGCDLPRF 189

[Close]

BLAST of Cucsat.G8687.T9 vs. ExPASy TrEMBL
Match: A0A6J1KDK6 (protein trichome birefringence-like 5 OS=Cucurbita maxima OX=3661 GN=LOC111492288 PE=3 SV=1)

HSP 1 Score: 308 bits (789), Expect = 1.95e-100
Identity = 158/189 (83.60%), Postives = 170/189 (89.95%), Query Frame = 0


Query: 1   MAFSSLPHYRFTFAPIFFLLFLCSFIFFTKRNADVSLSLYQDLSSQSPFTVSLASPS-IS 60
           MAFSSLP+YRF FAPIFFLLFLCSFIFFTKRNADVS SLYQDLS+Q+PFTVSLA P  I+
Sbjct: 1   MAFSSLPNYRFAFAPIFFLLFLCSFIFFTKRNADVSFSLYQDLSTQTPFTVSLAPPPLIA 60

Query: 61  EPQISFPGSGSDSSDIESLTNSSAIQTETSNDQIENKLSVNVENGSVSDGQAAA-SMVAD 120
           EPQISFP SGS SS IESLTN SA +TE SNDQIE++LSVN ENGSVSDG  A  SM AD
Sbjct: 61  EPQISFPDSGSGSSGIESLTNPSAQETEFSNDQIEDRLSVNGENGSVSDGDVAVGSMRAD 120

Query: 121 DSPDLSMQGLKQCDLYMGTWVKDEEHYPVYRLGSCPYVDEAYDCGNNGRADSEYTKWRWK 180
           D PDLS++GLKQCDLYMG+WVKDEEHYPVYR+GSCPYVDEAYDCGNNGR DSEYTKWRWK
Sbjct: 121 DGPDLSVEGLKQCDLYMGSWVKDEEHYPVYRVGSCPYVDEAYDCGNNGRNDSEYTKWRWK 180

Query: 181 PYGCDLPRY 187
           PYGCDLPR+
Sbjct: 181 PYGCDLPRF 189

The following BLAST results are available for this feature:

BLAST of Cucsat.G8687.T9 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4K5K4	3.7e-26	37.22	Protein trichome birefringence-like 5 OS=Arabidopsis thaliana OX=3702 GN=TBL5 PE...	[more]
Q8VYR3	2.2e-15	30.29	Protein trichome birefringence-like 2 OS=Arabidopsis thaliana OX=3702 GN=TBL2 PE...	[more]
Q6DR10	3.2e-14	46.15	Protein trichome birefringence-like 43 OS=Arabidopsis thaliana OX=3702 GN=TBL43 ...	[more]
F4I037	7.2e-14	44.78	Protein trichome berefringence-like 7 OS=Arabidopsis thaliana OX=3702 GN=TBL7 PE...	[more]
Q9LHL6	8.0e-13	46.77	Protein trichome birefringence-like 1 OS=Arabidopsis thaliana OX=3702 GN=TBL1 PE...	[more]

BLAST of Cucsat.G8687.T9 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004150389.1	1.72e-124	99.47	protein trichome birefringence-like 5 [Cucumis sativus] >KGN61191.1 hypothetical...	[more]
XP_008450807.1	2.92e-108	87.89	PREDICTED: protein trichome birefringence-like 5 [Cucumis melo] >KAA0047563.1 pr...	[more]
XP_038891165.1	2.13e-105	85.86	protein trichome birefringence-like 5 [Benincasa hispida]	[more]
XP_022929595.1	7.11e-101	84.13	protein trichome birefringence-like 5 [Cucurbita moschata]	[more]
XP_023545457.1	2.01e-100	84.13	protein trichome birefringence-like 5 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cucsat.G8687.T9 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LMI5	8.35e-125	99.47	PMR5N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G062660 PE=3 ...	[more]
A0A5D3CU67	1.41e-108	87.89	Protein trichome birefringence-like 5 OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3BPH3	1.41e-108	87.89	protein trichome birefringence-like 5 OS=Cucumis melo OX=3656 GN=LOC103492279 PE...	[more]
A0A6J1EUT7	3.44e-101	84.13	protein trichome birefringence-like 5 OS=Cucurbita moschata OX=3662 GN=LOC111436...	[more]
A0A6J1KDK6	1.95e-100	83.60	protein trichome birefringence-like 5 OS=Cucurbita maxima OX=3661 GN=LOC11149228...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025846	PMR5 N-terminal domain	PFAM	PF14416	PMR5N	coord: 129..183 e-value: 8.0E-19 score: 67.7
IPR029962	Trichome birefringence-like family	PANTHER	PTHR32285	PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED	coord: 9..187
IPR029970	Protein trichome birefringence-like 5	PANTHER	PTHR32285:SF8	PROTEIN TRICHOME BIREFRINGENCE-LIKE 5	coord: 9..187

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G8687	Cucsat.G8687	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G8687.T9.E1	Cucsat.G8687.T9.E1	exon
Cucsat.G8687.T9.E2	Cucsat.G8687.T9.E2	exon
Cucsat.G8687.T9.E3	Cucsat.G8687.T9.E3	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G8687.T9.C1	Cucsat.G8687.T9.C1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G8687.T9	Cucsat.G8687.T9-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0016413	O-acetyltransferase activity