Cucsat.G8687.T9 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AATTTCTCAATTTCTCAATTTGCCCGTAAAATTGCCTATCATCAAACACTTGAGAGATACCTTAGCTTAGCGGGTTTGTTGTCCAAATCCAAACACTGTTCTTCCCTTTTTCACTACCATTTTGTGGATCACACTCTCAAGCCTTCCTCTCTCTGCTCCTTCAATGGCGTTTTCCTCTCTCCCTCATTACCGTTTTACCTTCGCTCCCATTTTCTTCCTCCTCTTCCTCTGTTCCTTCATCTTCTTCACCAAACGAAATGCCGACGTTTCCCTTTCTCTCTACCAAGACCTCTCTTCCCAATCCCCTTTCACCGTCTCTCTCGCCTCTCCTTCAATATCCGAGCCCCAGATCTCTTTTCCGGGTTCTGGGTCTGATTCCTCTGACATTGAGTCCTTAACGAACTCATCTGCCATACAAACAGAGACTTCTAATGATCAAATTGAGAATAAGTTGTCTGTTAATGTCGAAAATGGTTCGGTTTCTGATGGTCAAGCTGCTGCTTCTATGGTGGCTGATGATAGTCCGGATTTGTCAATGCAGGGGCTGAAGCAATGTGATCTTTACATGGGGACTTGGGTTAAAGATGAAGAACATTATCCGGTTTATAGATTGGGTTCTTGCCCTTATGTTGATGAGGCTTATGACTGTGGTAATAATGGGAGAGCTGATTCTGAGTACACGAAATGGCGATGGAAGCCTTATGGCTGTGATCTCCCGAGGTATATGCAACGTGTGTGGGTTTTGTTGGTCTTAATTTGGTCAGTTTTCTTAGATGGATTTGAGTGAATGTATCCTTCTTTGACTGCTCCATTGGATAGTAATAGGTTTTCATTAGCATTTTGTTAGATTACATAATATTAAATTTAGCTTTTGAGTCTTTCAAGAGTTTTCCTTAATTACTATAATATTAATTTTACCTTCATCCAACTTAAGCTAATCACCGAGCTTTTGCGTAATTGTTGTTTTTGAGGGATGAATATGAGGGATAGAATTCTTTCAAAAAGTCCCCACACATTTCCTTGTCTACCAGCCTTGGTAGTGTTGCCTTGTAAAAGAAATCTAAATTATGCCATTTATTTATTGGGTATTGGTGGGCTAAATTGCCTGATGCTTCAACATAACAATGGTCTTTTCTAGAAACACTCGAGGCTGTCTTTTTCACATACTGTATGGGATTTCTGTCAATTTGGAAGTTGGATTAATGCTTTTTTAACAATTACTTAGGTACTTGAGGCCCCAAAGAAGTTGAAGAGTCTCCCAAGGTGTACACATAAAGCTAGTTGGAGAATTGTGGGATCTTAATATTCTTTTTGTTGTCTACTTTTGGAGTTAGCCCCAAGGAGTGGGCGTTTTCCTCTCCTATTTTTGTTTGTGTGGGTTTCCTATACCTTGAGTTCGTTAGCTGACTATCTTCTCTCCTTTGATTTTGTAATTATGTTTGTTTGACTTCATGCTTTAGTTCTGATTAGAAAAACAAAAACAAGCGATTGAGTATTTTACAGTCAAGTAGATATTTCATGTATACTAAGAAAAGTATCATCTTTTCACTTGGAGCTCAGATTTAATGCAACAGACTTTTTGGTGAGACTGAGAGGGAAAAGATTGATGCTCGTTGGAGATTCTATGAACAGAAACCAGTTTGAGTCAATCCTTTGTCTCCTTAGAGAAGGCCTTCAAGATAAGAATAGAATGTTTGAGACCCACGGGTATAAAATTACCAAGGGAAGAGGTTACTTCGTTTTCAAGTTTAAGGTAATAAAAGAATTGCAATGATATTACTACTGCGGTTAATATAGATTCCTTCACATGAATATAACTTCTTTGGCAGGGTGTCTTGTGTTAGATTAAAACTTTGTGTGATAGAGGTCTTCATATTCAAGAGGAAAATAGTTCACGATGACTTTTTGCAAGATATGACTTTCAGTTTTCATCTAGTAGACACCGTTTAGTTTGGTGAAACGGTTTGTTTGTATATGTTAGATCATTAAACCACTTATAAAGGCAAGAGTGTTCTCGAGTTCCAGTCTGCTTGTTTTTATCTATCTTATTATGAAAAAATATATTTTAGAGGGATGGTTGTTGGCACCATAATTAGAAAATATTTTCTTACATGCTTTTATTCTTGAACGGTTCTATTGCAATAAAAAAGTACTGCCTGTTCGTTTAGTTCAGCTTTTGCAGCTACTGGTAACTGGTAAGTAAATAACTAATTCAATTAACATTTGGCAGGATTATGACTGTACTGTCGAATTTGTGAGATCACATTTTCTTGTGAGGGAAGGAGTTCGTATAAATGCTCAAGGAAACTCAAATCCGACTCTATCTATAGATCGAATTGACAAGACTTCTGGACGCTGGAAGCGCGCTGACATTCTTGTGTTTAATACTGGCCACTGGTGGACTCATGGAAAGACCGCTCGTGGGTAAGGATTTAATTTCTAATTGCATAAAGAATACCCTGGATGGATTTTACCTTACATTCTCACAGAAACGAGAAAGATTTTGTGTTTGCTAACAAATTGACAAACGCAACACTGAATTGCAATGAAATAGACTACGATGAGTTTTTTAATTCTTCAAAAATTTTAAAAAACTTTTGCATCTTATTTTACTAAATTTCCATGCTTATTCTATTTACATACAATCTTTAAATATTTGATTTTAGTTAAACTTTGAATTACAATCATTTTGGTCCTTGTTCTTAATTTTATTTAATACATTATTTAACGGAAACCTAACACATGCATGTCTTTTGTTTAGATAAATATGTCTAGTGTGGATCAATATTTTAAACTACATGATGAAGTTTTAGGGTTTTTTTTTCCCTTTTTTGTAAAGAAATTATTATAAGAAACAAATTTAATTGATGTAAAATTTACAAAAAAAAAAAGAAACTGAAAGTGAAGGCCAAACCAATGGAGTTACAAAAGAGTTCTCCTATTGGTCAAAAGATAGGATAGATGGTTAGAACTATAGAAAGATGTACATTTACACCAAATCATAGCATGGAAGATAATGAGCTCAAAATAATTAGCATAAGGTTCAAAACAAGGAAAATTGATACACATTACTAAAATAACTTTTTGTACAAAATTTAAGAACCAAAACAAAATATTTGAAACTGAGGAATCTTTGTAGAATGTTTAAAAGAGATAAATAATCTAGATTGCATAAAATATAGAGACCAAATAAGGCTAATCAAACTTTGTATGAGAACTAATTTGATTCTTTAGTTTAGTTTACTGATACAGTTTGATGATGCAGGAAAAATTATTATAAAGAAGGTGAGGTTCTCTACCCGCAGTTCGATGCTGTTGAGGCTTACAGACGAGCGCTCAAGACATGGGGAAACTGGATCGATAATAATATAAATCCAGCTAAGCAGTTAGTCTTCTATAGAGGATATTCTTCCGCTCATTTCAGGTACAAATTTCATTCCCTTTTCTTTTGAAATAGCTTTGTGTATATATGTCAATATATGTTGATGAGCTGGAAAGATAGGGTGGAGAAAGTTTGTTGGAGATTATACCGTGAAAATTGACAAAGTAATCAACCATTCTTACAAAGTTCTTAAGAATATCTTTAACATTAAATATAGACCTAACCTATCGGCATAAACATAAGTTGCAATTTTATGTAGTATCTAGAGGTCAGTTTGTATTGTTTCTTTTTCACTTTTTTGGTTTTATCTAAACTTTCATTCGAAGAGGAATCTTATATACAAGATTAATATACTCACTGTAACCATTCAACACAAGTTTTTTGGTTCAAGGGTCTTTCACTTTGAATGACTAATGAATGGATTTAGTTATTTATTCCTCAATAAAATATTCATGTTTAAAAAAGATTTCTGTTCACAAGGGATAGAAAATTCCGTGTCTACTTTTACATTTATATGTTGAACTTTGCAAAACAGAGGTGGAGATTGGGATTCAGGAGGGTCATGCAATGGTGAAACTGAACCAGTCTTAAGTGGTGCCATCCTTGATAACTATCCTTTGAAAATGAAGATAGTTGAGGAAACCATTAAGGAAATGAGGGTTCCGGTCATACTTTTGAATGTCACAAGGTTAACCAATTTCCGCAAGGATGGTCACCCATCAATCTATGGTAAGAATCATACTGCTGCGAGAAAGGTCTCAACTAGACGGCAGGACTGCAGCCATTGGTGCCTCCCTGGGGTTCCTGATGCCTGGAATGAACTTATTTACGCTGCTTTAGTTTCTCGATCGATAAAATCCAAGTTCATCTAGCTGAGCAACAACAATATTCATTTCCTCATTTGGGAAATAATCAAGAAGGGTTTCCTTGGAGAAGTTTCCCTTGGTGAAGGCTACAGTCTGATTTGGCTGCCTTTTTGCATAGGCCAGCCGTAGCTCCTTGATTGTTAACCATTCCTTTTTGCTACCAACTGCTCCTAGCTCCTGTGTATAGAATCTCTTATATCTATATTATGCTTATCAGATTCGAAAAAAGATGCAATAGGTAGGGAGGCTTTCTGAAGATTTGTTTTGGTGTATTTTCATATATATTACAGATATGCAATATAGTTGGCAAAGTGATATTCATATGATAAATGATCAATTTTGTTGAATACACACCTCTCAAGTTCCAATTGTGCTCATGCTTGATA ATGGCGTTTTCCTCTCTCCCTCATTACCGTTTTACCTTCGCTCCCATTTTCTTCCTCCTCTTCCTCTGTTCCTTCATCTTCTTCACCAAACGAAATGCCGACGTTTCCCTTTCTCTCTACCAAGACCTCTCTTCCCAATCCCCTTTCACCGTCTCTCTCGCCTCTCCTTCAATATCCGAGCCCCAGATCTCTTTTCCGGGTTCTGGGTCTGATTCCTCTGACATTGAGTCCTTAACGAACTCATCTGCCATACAAACAGAGACTTCTAATGATCAAATTGAGAATAAGTTGTCTGTTAATGTCGAAAATGGTTCGGTTTCTGATGGTCAAGCTGCTGCTTCTATGGTGGCTGATGATAGTCCGGATTTGTCAATGCAGGGGCTGAAGCAATGTGATCTTTACATGGGGACTTGGGTTAAAGATGAAGAACATTATCCGGTTTATAGATTGGGTTCTTGCCCTTATGTTGATGAGGCTTATGACTGTGGTAATAATGGGAGAGCTGATTCTGAGTACACGAAATGGCGATGGAAGCCTTATGGCTGTGATCTCCCGAGGTATATGCAACGTGTGTGGGTTTTGTTGGTCTTAATTTGGTCAGTTTTCTTAGATGGATTTGAGTGA MAFSSLPHYRFTFAPIFFLLFLCSFIFFTKRNADVSLSLYQDLSSQSPFTVSLASPSISEPQISFPGSGSDSSDIESLTNSSAIQTETSNDQIENKLSVNVENGSVSDGQAAASMVADDSPDLSMQGLKQCDLYMGTWVKDEEHYPVYRLGSCPYVDEAYDCGNNGRADSEYTKWRWKPYGCDLPRYMQRVWVLLVLIWSVFLDGFE Homology
BLAST of Cucsat.G8687.T9 vs. ExPASy Swiss-Prot
Match: F4K5K4 (Protein trichome birefringence-like 5 OS=Arabidopsis thaliana OX=3702 GN=TBL5 PE=2 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 3.7e-26 Identity = 67/180 (37.22%), Postives = 99/180 (55.00%), Query Frame = 0
BLAST of Cucsat.G8687.T9 vs. ExPASy Swiss-Prot
Match: Q8VYR3 (Protein trichome birefringence-like 2 OS=Arabidopsis thaliana OX=3702 GN=TBL2 PE=2 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 2.2e-15 Identity = 53/175 (30.29%), Postives = 84/175 (48.00%), Query Frame = 0
BLAST of Cucsat.G8687.T9 vs. ExPASy Swiss-Prot
Match: Q6DR10 (Protein trichome birefringence-like 43 OS=Arabidopsis thaliana OX=3702 GN=TBL43 PE=2 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 3.2e-14 Identity = 30/65 (46.15%), Postives = 47/65 (72.31%), Query Frame = 0
BLAST of Cucsat.G8687.T9 vs. ExPASy Swiss-Prot
Match: F4I037 (Protein trichome berefringence-like 7 OS=Arabidopsis thaliana OX=3702 GN=TBL7 PE=3 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 7.2e-14 Identity = 30/67 (44.78%), Postives = 44/67 (65.67%), Query Frame = 0
BLAST of Cucsat.G8687.T9 vs. ExPASy Swiss-Prot
Match: Q9LHL6 (Protein trichome birefringence-like 1 OS=Arabidopsis thaliana OX=3702 GN=TBL1 PE=2 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 8.0e-13 Identity = 29/62 (46.77%), Postives = 43/62 (69.35%), Query Frame = 0
BLAST of Cucsat.G8687.T9 vs. NCBI nr
Match: XP_004150389.1 (protein trichome birefringence-like 5 [Cucumis sativus] >KGN61191.1 hypothetical protein Csa_006623 [Cucumis sativus]) HSP 1 Score: 370 bits (950), Expect = 1.72e-124 Identity = 186/187 (99.47%), Postives = 187/187 (100.00%), Query Frame = 0
BLAST of Cucsat.G8687.T9 vs. NCBI nr
Match: XP_008450807.1 (PREDICTED: protein trichome birefringence-like 5 [Cucumis melo] >KAA0047563.1 protein trichome birefringence-like 5 [Cucumis melo var. makuwa] >TYK14960.1 protein trichome birefringence-like 5 [Cucumis melo var. makuwa]) HSP 1 Score: 329 bits (843), Expect = 2.92e-108 Identity = 167/190 (87.89%), Postives = 176/190 (92.63%), Query Frame = 0
BLAST of Cucsat.G8687.T9 vs. NCBI nr
Match: XP_038891165.1 (protein trichome birefringence-like 5 [Benincasa hispida]) HSP 1 Score: 323 bits (828), Expect = 2.13e-105 Identity = 164/191 (85.86%), Postives = 176/191 (92.15%), Query Frame = 0
BLAST of Cucsat.G8687.T9 vs. NCBI nr
Match: XP_022929595.1 (protein trichome birefringence-like 5 [Cucurbita moschata]) HSP 1 Score: 310 bits (794), Expect = 7.11e-101 Identity = 159/189 (84.13%), Postives = 170/189 (89.95%), Query Frame = 0
BLAST of Cucsat.G8687.T9 vs. NCBI nr
Match: XP_023545457.1 (protein trichome birefringence-like 5 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 309 bits (791), Expect = 2.01e-100 Identity = 159/189 (84.13%), Postives = 170/189 (89.95%), Query Frame = 0
BLAST of Cucsat.G8687.T9 vs. ExPASy TrEMBL
Match: A0A0A0LMI5 (PMR5N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G062660 PE=3 SV=1) HSP 1 Score: 370 bits (950), Expect = 8.35e-125 Identity = 186/187 (99.47%), Postives = 187/187 (100.00%), Query Frame = 0
BLAST of Cucsat.G8687.T9 vs. ExPASy TrEMBL
Match: A0A5D3CU67 (Protein trichome birefringence-like 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2754G00100 PE=3 SV=1) HSP 1 Score: 329 bits (843), Expect = 1.41e-108 Identity = 167/190 (87.89%), Postives = 176/190 (92.63%), Query Frame = 0
BLAST of Cucsat.G8687.T9 vs. ExPASy TrEMBL
Match: A0A1S3BPH3 (protein trichome birefringence-like 5 OS=Cucumis melo OX=3656 GN=LOC103492279 PE=3 SV=1) HSP 1 Score: 329 bits (843), Expect = 1.41e-108 Identity = 167/190 (87.89%), Postives = 176/190 (92.63%), Query Frame = 0
BLAST of Cucsat.G8687.T9 vs. ExPASy TrEMBL
Match: A0A6J1EUT7 (protein trichome birefringence-like 5 OS=Cucurbita moschata OX=3662 GN=LOC111436132 PE=3 SV=1) HSP 1 Score: 310 bits (794), Expect = 3.44e-101 Identity = 159/189 (84.13%), Postives = 170/189 (89.95%), Query Frame = 0
BLAST of Cucsat.G8687.T9 vs. ExPASy TrEMBL
Match: A0A6J1KDK6 (protein trichome birefringence-like 5 OS=Cucurbita maxima OX=3661 GN=LOC111492288 PE=3 SV=1) HSP 1 Score: 308 bits (789), Expect = 1.95e-100 Identity = 158/189 (83.60%), Postives = 170/189 (89.95%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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