Cucsat.G8687.T5 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TGATGATAGTCCGGATTTGTCAATGCAGGGGCTGAAGCAATGTGATCTTTACATGGGGACTTGGGTTAAAGATGAAGAACATTATCCGGTTTATAGATTGGGTTCTTGCCCTTATGTTGATGAGGCTTATGACTGTGGTAATAATGGGAGAGCTGATTCTGAGTACACGAAATGGCGATGGAAGCCTTATGGCTGTGATCTCCCGAGGTATATGCAACGTGTGTGGGTTTTGTTGGTCTTAATTTGGTCAGTTTTCTTAGATGGATTTGAGTGAATGTATCCTTCTTTGACTGCTCCATTGGATAGTAATAGGTTTTCATTAGCATTTTGTTAGATTACATAATATTAAATTTAGCTTTTGAGTCTTTCAAGAGTTTTCCTTAATTACTATAATATTAATTTTACCTTCATCCAACTTAAGCTAATCACCGAGCTTTTGCGTAATTGTTGTTTTTGAGGGATGAATATGAGGGATAGAATTCTTTCAAAAAGTCCCCACACATTTCCTTGTCTACCAGCCTTGGTAGTGTTGCCTTGTAAAAGAAATCTAAATTATGCCATTTATTTATTGGGTATTGGTGGGCTAAATTGCCTGATGCTTCAACATAACAATGGTCTTTTCTAGAAACACTCGAGGCTGTCTTTTTCACATACTGTATGGGATTTCTGTCAATTTGGAAGTTGGATTAATGCTTTTTTAACAATTACTTAGGTACTTGAGGCCCCAAAGAAGTTGAAGAGTCTCCCAAGGTGTACACATAAAGCTAGTTGGAGAATTGTGGGATCTTAATATTCTTTTTGTTGTCTACTTTTGGAGTTAGCCCCAAGGAGTGGGCGTTTTCCTCTCCTATTTTTGTTTGTGTGGGTTTCCTATACCTTGAGTTCGTTAGCTGACTATCTTCTCTCCTTTGATTTTGTAATTATGTTTGTTTGACTTCATGCTTTAGTTCTGATTAGAAAAACAAAAACAAGCGATTGAGTATTTTACAGTCAAGTAGATATTTCATGTATACTAAGAAAAGTATCATCTTTTCACTTGGAGCTCAGATTTAATGCAACAGACTTTTTGGTGAGACTGAGAGGGAAAAGATTGATGCTCGTTGGAGATTCTATGAACAGAAACCAGTTTGAGTCAATCCTTTGTCTCCTTAGAGAAGGCCTTCAAGATAAGAATAGAATGTTTGAGACCCACGGGTATAAAATTACCAAGGGAAGAGGTTACTTCGTTTTCAAGTTTAAGGTAATAAAAGAATTGCAATGATATTACTACTGCGGTTAATATAGATTCCTTCACATGAATATAACTTCTTTGGCAGGGTGTCTTGTGTTAGATTAAAACTTTGTGTGATAGAGGTCTTCATATTCAAGAGGAAAATAGTTCACGATGACTTTTTGCAAGATATGACTTTCAGTTTTCATCTAGTAGACACCGTTTAGTTTGGTGAAACGGTTTGTTTGTATATGTTAGATCATTAAACCACTTATAAAGGCAAGAGTGTTCTCGAGTTCCAGTCTGCTTGTTTTTATCTATCTTATTATGAAAAAATATATTTTAGAGGGATGGTTGTTGGCACCATAATTAGAAAATATTTTCTTACATGCTTTTATTCTTGAACGGTTCTATTGCAATAAAAAAGTACTGCCTGTTCGTTTAGTTCAGCTTTTGCAGCTACTGGTAACTGGTAAGTAAATAACTAATTCAATTAACATTTGGCAGGATTATGACTGTACTGTCGAATTTGTGAGATCACATTTTCTTGTGAGGGAAGGAGTTCGTATAAATGCTCAAGGAAACTCAAATCCGACTCTATCTATAGATCGAATTGACAAGACTTCTGGACGCTGGAAGCGCGCTGACATTCTTGTGTTTAATACTGGCCACTGGTGGACTCATGGAAAGACCGCTCGTGGGTAAGGATTTAATTTCTAATTGCATAAAGAATACCCTGGATGGATTTTACCTTACATTCTCACAGAAACGAGAAAGATTTTGTGTTTGCTAACAAATTGACAAACGCAACACTGAATTGCAATGAAATAGACTACGATGAGTTTTTTAATTCTTCAAAAATTTTAAAAAACTTTTGCATCTTATTTTACTAAATTTCCATGCTTATTCTATTTACATACAATCTTTAAATATTTGATTTTAGTTAAACTTTGAATTACAATCATTTTGGTCCTTGTTCTTAATTTTATTTAATACATTATTTAACGGAAACCTAACACATGCATGTCTTTTGTTTAGATAAATATGTCTAGTGTGGATCAATATTTTAAACTACATGATGAAGTTTTAGGGTTTTTTTTTCCCTTTTTTGTAAAGAAATTATTATAAGAAACAAATTTAATTGATGTAAAATTTACAAAAAAAAAAAGAAACTGAAAGTGAAGGCCAAACCAATGGAGTTACAAAAGAGTTCTCCTATTGGTCAAAAGATAGGATAGATGGTTAGAACTATAGAAAGATGTACATTTACACCAAATCATAGCATGGAAGATAATGAGCTCAAAATAATTAGCATAAGGTTCAAAACAAGGAAAATTGATACACATTACTAAAATAACTTTTTGTACAAAATTTAAGAACCAAAACAAAATATTTGAAACTGAGGAATCTTTGTAGAATGTTTAAAAGAGATAAATAATCTAGATTGCATAAAATATAGAGACCAAATAAGGCTAATCAAACTTTGTATGAGAACTAATTTGATTCTTTAGTTTAGTTTACTGATACAGTTTGATGATGCAGGAAAAATTATTATAAAGAAGGTGAGGTTCTCTACCCGCAGTTCGATGCTGTTGAGGCTTACAGACGAGCGCTCAAGACATGGGGAAACTGGATCGATAATAATATAAATCCAGCTAAGCAGTTAGTCTTCTATAGAGGATATTCTTCCGCTCATTTCAGGTACAAATTTCATTCCCTTTTCTTTTGAAATAGCTTTGTGTATATATGTCAATATATGTTGATGAGCTGGAAAGATAGGGTGGAGAAAGTTTGTTGGAGATTATACCGTGAAAATTGACAAAGTAATCAACCATTCTTACAAAGTTCTTAAGAATATCTTTAACATTAAATATAGACCTAACCTATCGGCATAAACATAAGTTGCAATTTTATGTAGTATCTAGAGGTCAGTTTGTATTGTTTCTTTTTCACTTTTTTGGTTTTATCTAAACTTTCATTCGAAGAGGAATCTTATATACAAGATTAATATACTCACTGTAACCATTCAACACAAGTTTTTTGGTTCAAGGGTCTTTCACTTTGAATGACTAATGAATGGATTTAGTTATTTATTCCTCAATAAAATATTCATGTTTAAAAAAGATTTCTGTTCACAAGGGATAGAAAATTCCGTGTCTACTTTTACATTTATATGTTGAACTTTGCAAAACAGAGGTGGAGATTGGGATTCAGGAGGGTCATGCAATGGTGAAACTGAACCAGTCTTAAGTGGTGCCATCCTTGATAACTATCCTTTGAAAATGAAGATAGTTGAGGAAACCATTAAGGAAATGAGGGTTCCGGTCATACTTTTGAATGTCACAAGGTTAACCAATTTCCGCAAGGATGGTCACCCATCAATCTATGGTAAGAATCATACTGCTGCGAGAAAGGTCTCAACTAGACGGCAGGACTGCAGCCATTGGTGCCTCCCTGGGGTTCCTGATGCCTGGAATGAACTTATTTACGCTGCTTTAGTTTCTCGATCGATAAAATCCAAGTTCATCTAGCTGAGCAACAACAATATTCATTTCCTCATTTGGGAAATAATCAAGAAGGGTTTCCTTGGAGAAGTTTCCCTTGGTGAAGGCTACAGTCTGATTTGGCTGCCTTTTTGCATAGGCCAGCCGTAGCTCCTTGATTGTTAACCATTCCTTTTTGCTACCAACTGCTCCTAGCTCCTGTGTATAGAATCTCTTATATCTATATTATGCTTATCAGATTCGAAAAAAGATGCAATAGGTAGGGAGGCTTTCTGAAGATTTGTTTTGGTGTATTTTCATATATATTACAGATATGCAATATAGTTGGCAAAGTGATATTCATATGATAAATGATCAATTTTGTTGAATACACACCTCTCAAGTTCCAATTGTGCTCATGCTTGATACAAACTTGGGACTCTTGAAATTTTTTTAGTTTCT ATGCTCGTTGGAGATTCTATGAACAGAAACCAGTTTGAGTCAATCCTTTGTCTCCTTAGAGAAGGCCTTCAAGATAAGAATAGAATGTTTGAGACCCACGGGTATAAAATTACCAAGGGAAGAGGTTACTTCGTTTTCAAGTTTAAGGATTATGACTGTACTGTCGAATTTGTGAGATCACATTTTCTTGTGAGGGAAGGAGTTCGTATAAATGCTCAAGGAAACTCAAATCCGACTCTATCTATAGATCGAATTGACAAGACTTCTGGACGCTGGAAGCGCGCTGACATTCTTGTGTTTAATACTGGCCACTGGTGGACTCATGGAAAGACCGCTCGTGGGAAAAATTATTATAAAGAAGGTGAGGTTCTCTACCCGCAGTTCGATGCTGTTGAGGCTTACAGACGAGCGCTCAAGACATGGGGAAACTGGATCGATAATAATATAAATCCAGCTAAGCAGTTAGTCTTCTATAGAGGATATTCTTCCGCTCATTTCAGAGGTGGAGATTGGGATTCAGGAGGGTCATGCAATGGTGAAACTGAACCAGTCTTAAGTGGTGCCATCCTTGATAACTATCCTTTGAAAATGAAGATAGTTGAGGAAACCATTAAGGAAATGAGGGTTCCGGTCATACTTTTGAATGTCACAAGGTTAACCAATTTCCGCAAGGATGGTCACCCATCAATCTATGGTAAGAATCATACTGCTGCGAGAAAGGTCTCAACTAGACGGCAGGACTGCAGCCATTGGTGCCTCCCTGGGGTTCCTGATGCCTGGAATGAACTTATTTACGCTGCTTTAGTTTCTCGATCGATAAAATCCAAGTTCATCTAG MLVGDSMNRNQFESILCLLREGLQDKNRMFETHGYKITKGRGYFVFKFKDYDCTVEFVRSHFLVREGVRINAQGNSNPTLSIDRIDKTSGRWKRADILVFNTGHWWTHGKTARGKNYYKEGEVLYPQFDAVEAYRRALKTWGNWIDNNINPAKQLVFYRGYSSAHFRGGDWDSGGSCNGETEPVLSGAILDNYPLKMKIVEETIKEMRVPVILLNVTRLTNFRKDGHPSIYGKNHTAARKVSTRRQDCSHWCLPGVPDAWNELIYAALVSRSIKSKFI Homology
BLAST of Cucsat.G8687.T5 vs. ExPASy Swiss-Prot
Match: F4K5K4 (Protein trichome birefringence-like 5 OS=Arabidopsis thaliana OX=3702 GN=TBL5 PE=2 SV=1) HSP 1 Score: 495.7 bits (1275), Expect = 3.3e-139 Identity = 221/269 (82.16%), Postives = 247/269 (91.82%), Query Frame = 0
BLAST of Cucsat.G8687.T5 vs. ExPASy Swiss-Prot
Match: Q8VYR3 (Protein trichome birefringence-like 2 OS=Arabidopsis thaliana OX=3702 GN=TBL2 PE=2 SV=1) HSP 1 Score: 323.2 bits (827), Expect = 3.0e-87 Identity = 140/280 (50.00%), Postives = 200/280 (71.43%), Query Frame = 0
BLAST of Cucsat.G8687.T5 vs. ExPASy Swiss-Prot
Match: Q9FG35 (Protein trichome birefringence OS=Arabidopsis thaliana OX=3702 GN=TBR PE=1 SV=1) HSP 1 Score: 322.4 bits (825), Expect = 5.0e-87 Identity = 135/271 (49.82%), Postives = 200/271 (73.80%), Query Frame = 0
BLAST of Cucsat.G8687.T5 vs. ExPASy Swiss-Prot
Match: Q9LHL6 (Protein trichome birefringence-like 1 OS=Arabidopsis thaliana OX=3702 GN=TBL1 PE=2 SV=1) HSP 1 Score: 320.5 bits (820), Expect = 1.9e-86 Identity = 140/271 (51.66%), Postives = 194/271 (71.59%), Query Frame = 0
BLAST of Cucsat.G8687.T5 vs. ExPASy Swiss-Prot
Match: Q9LZQ1 (Protein trichome birefringence-like 6 OS=Arabidopsis thaliana OX=3702 GN=TBL6 PE=2 SV=1) HSP 1 Score: 299.3 bits (765), Expect = 4.6e-80 Identity = 137/271 (50.55%), Postives = 185/271 (68.27%), Query Frame = 0
BLAST of Cucsat.G8687.T5 vs. NCBI nr
Match: XP_004150389.1 (protein trichome birefringence-like 5 [Cucumis sativus] >KGN61191.1 hypothetical protein Csa_006623 [Cucumis sativus]) HSP 1 Score: 584 bits (1506), Expect = 1.07e-207 Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = 0
BLAST of Cucsat.G8687.T5 vs. NCBI nr
Match: XP_008450807.1 (PREDICTED: protein trichome birefringence-like 5 [Cucumis melo] >KAA0047563.1 protein trichome birefringence-like 5 [Cucumis melo var. makuwa] >TYK14960.1 protein trichome birefringence-like 5 [Cucumis melo var. makuwa]) HSP 1 Score: 569 bits (1466), Expect = 1.46e-201 Identity = 270/278 (97.12%), Postives = 274/278 (98.56%), Query Frame = 0
BLAST of Cucsat.G8687.T5 vs. NCBI nr
Match: XP_038891165.1 (protein trichome birefringence-like 5 [Benincasa hispida]) HSP 1 Score: 568 bits (1465), Expect = 1.07e-200 Identity = 271/278 (97.48%), Postives = 273/278 (98.20%), Query Frame = 0
BLAST of Cucsat.G8687.T5 vs. NCBI nr
Match: KAG7029863.1 (Protein trichome birefringence-like 5 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 558 bits (1437), Expect = 3.34e-200 Identity = 262/278 (94.24%), Postives = 272/278 (97.84%), Query Frame = 0
BLAST of Cucsat.G8687.T5 vs. NCBI nr
Match: XP_022997343.1 (protein trichome birefringence-like 5 [Cucurbita maxima]) HSP 1 Score: 555 bits (1430), Expect = 4.22e-196 Identity = 263/278 (94.60%), Postives = 270/278 (97.12%), Query Frame = 0
BLAST of Cucsat.G8687.T5 vs. ExPASy TrEMBL
Match: A0A0A0LMI5 (PMR5N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G062660 PE=3 SV=1) HSP 1 Score: 584 bits (1506), Expect = 5.20e-208 Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = 0
BLAST of Cucsat.G8687.T5 vs. ExPASy TrEMBL
Match: A0A5D3CU67 (Protein trichome birefringence-like 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2754G00100 PE=3 SV=1) HSP 1 Score: 569 bits (1466), Expect = 7.06e-202 Identity = 270/278 (97.12%), Postives = 274/278 (98.56%), Query Frame = 0
BLAST of Cucsat.G8687.T5 vs. ExPASy TrEMBL
Match: A0A1S3BPH3 (protein trichome birefringence-like 5 OS=Cucumis melo OX=3656 GN=LOC103492279 PE=3 SV=1) HSP 1 Score: 569 bits (1466), Expect = 7.06e-202 Identity = 270/278 (97.12%), Postives = 274/278 (98.56%), Query Frame = 0
BLAST of Cucsat.G8687.T5 vs. ExPASy TrEMBL
Match: A0A6J1KDK6 (protein trichome birefringence-like 5 OS=Cucurbita maxima OX=3661 GN=LOC111492288 PE=3 SV=1) HSP 1 Score: 555 bits (1430), Expect = 2.04e-196 Identity = 263/278 (94.60%), Postives = 270/278 (97.12%), Query Frame = 0
BLAST of Cucsat.G8687.T5 vs. ExPASy TrEMBL
Match: A0A6J1EUT7 (protein trichome birefringence-like 5 OS=Cucurbita moschata OX=3662 GN=LOC111436132 PE=3 SV=1) HSP 1 Score: 553 bits (1425), Expect = 1.18e-195 Identity = 261/278 (93.88%), Postives = 270/278 (97.12%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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