Cucsat.G8178.T12 (mRNA) Cucumber (B10) v3

Overview
NameCucsat.G8178.T12
TypemRNA
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionUDP-arabinose 4-epimerase 1-like
Locationctg1557: 2250560 .. 2255543 (+)
RNA-Seq ExpressionCucsat.G8178.T12
SyntenyCucsat.G8178.T12
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GGTATATACGCGCTAAATACAATGTGGACAAACAGACAGCTCCCTGCTCCGTCGTCCGCTCCAAACAGAACTTCACCTTCTTCTTCTCTTTCCCCTTCTTTCCTTTATTTTCATTTACTTTCTGATTCGATTCCATTAACGACGCCCCCCATTTTTACGTTCTCTCTCATTTTCTCACAATACCCACATCCCCATTTTTTTTTTTTTTTGTTCTTTCTTCCTCCAATTTCAATTCCTCTCCCCCACTTCCATTCAATTCCTGGTAACATTCTCCTCTTTCTCTTCTTTTCCTTTTCTGGGTCTTCCTTCGTTTCATGTAATCTGTTTTCCCTTTTCATCTTTTTTCTTTATAATTTGCTTTTCATGAAGATCTTTTGATTCACAAATGCCAAAATTCAAACGGCCTTCTTTCTAATCATCTTCCTTCTACTGTTTCTCTCTTGTTTCCCATTTTTCAGTTACTTCTTTGCGATCAAAGCCGTTCAGTTACCTCGACGTGTACGTTTTTATTTTGATGATTACGTTACTTTTTGTTTTCGTTTTTTGTTTTTATTATGTGGGATTCTCTTCCTTTCATCTCCGCTTTCATCTCTGTTTAGGGATTGATTTCTTTCTTCTTTACTCGTTGAAAGTGGAAATGACTGGTCAGATGATTGTTGTTTTTTAAGAAAATTTTATTTTTTAGTGTCATTCTTGTAATGGTTACTTGGAATGGGAATTGATCTGTATTTTTAAATTTGTGGTTTGATTGGTACTTGGTTTCCATTAATGCATGCTGATTACTATAATTTGCATTATACTTTTTCTAATCTTATCAGCATCTATGAAGTGGAGTTGGTTTTTTTCTTTTGGTTCTTTCTTGTTATGTAGTTTGAAAAAAGAAGTTATTATTTTTTATATTTCCTAATTTTTTTTTTAAAAAAAAATTGATTTTTGTTTATATTTGTGTTTTGCTTTTGATTTCTGCTTATGGGGTTTTCTCCTGATAGTATTTTGTCTCCATTTGTCATTCAGAAGTTTTGAGATTTGAAAGTAATCATATCTTGAGGTTTCACATTTGTGGCTAGTTTAGTTTCAGAATTTACTGATATGTTTTTGGTTAATTTTGCAGGATTTTATACCACAGCTCCATCTGTGAAGTAGACTCATTGAGTTACTGTCCTATAATATTACGAGAGATAGAGCAATTTCCCAAATGCTCAGTTTTGGTAGGTCGAGAAATCAATCAAGGTTCGGGAGATCTGTGTCATTTGGAGGTGAGTTTCTCTTCTATAGTGTTTTAGAAAAATTATGTTTATTGCAACTATGGATGTTTCAAACTTTTAAGTTGCTTGAAAATATGTGAAAATTGTAGCTCTTTAAGATTTTCAAATTTTTTTACTTGTTTTTCTTGCATGGACCTATCTTTTCCCTTGTAGGTATGGATTATCCTGATCCCAAACGGAAGAACAATTTTGTTGGAAAGATCATCTTGGCTGCTTCACTTACTGCAATTTGTATTGTTATGCTCAAGCAATCCCCAAATTTTAGCACCCCAACCCCGGTAGCTCTCAATCTCTAATGATAATTTTATGACTTTATATCACTTCTGACCAAGTACATTCCGTGATTATATTATTTTCTATTGGAAGCTACAAGTCCTGTCGGAAGGATATTTAGACTTTTCACTTGTTATGTGGACTGTCATGTACCAGATCATATTTTACAAGTTTGGTTTAAGGAAATATTATTGTACAATAGCAATACAGCTGCTAATCAATTTCTTTATTTAATTGTACATCATAGTGCATACTCTAATCCCGTGTTTATGTTATTTCATTGCTACGATAAATGTAGGGTTGTATGCATTTCGTTTGTAGGTTGTTTCCAACATCATTTGGCTGATGCAATCGTTTAATTGTAGTTCTGATCTAAGAGGCCAAAAACTGTTCTTTGCTCCAAGATTTGTTTTTATTCACCATTGGCTCTTCTCTGTTTCTGTTTAAAAATTGCTGTCATTTTCAATGAACTTAGCAGTTCTTAGTTTACAAAGTTGCTCCATTGAATTTCCTTCAACTTGTTCTTTTAATTTTAGTTTTAGAATTCTGATCTGATATTTTTTGGGCAGCAGTCAAATAATTGATAACTCTCTCTCTCTCTCTCTCTCTCTCTCGCAGATAAAGCTCTTATATCTGGTGCTCTTTGTGATCAATTTTGTAGACACCCATCTTAATATTTTTGCTTTTAAACTCCTTGGCTTATTTAGAGGATTTCTTATTTCTAAACCTGCCTTTATTGGGCAATGAAAGAACTTTTCTTATCGAAAAAAGACTTGTTGAGAATCAACTTTTCCTAAAAGAATCACTCTTTTATGTAATTTCTAAAGTTGTGCATGTTTTTTTTCCTTCCAGTTTGCAAGTCATCAACTAGGAGTTACTCATGTTCTAGTAACAGGAGGTGCAGGATACATTGGCTCGCATGCTGCACTTCGATTATTAAAGGACTCATACCGTGTAACAATTGTGGTATGACACTTTTTAATATTGTATTTGTACCCTTTTCATATCTTTGGTGTTATACCCTATTAATAATTCAATCACGTCAGGACAACCTATCACGAGGAAACCTAGGTGCTGTGAAGGTTTTGCAAGAATTGTTTCCAGAATATGGAAGGCTTCAGTTCATCTATGCTGACTTGGGAGATGCAAAATCCGTATCCTTTCTACTTGACATGTTATGATTTATATTTCTGAAGAATACTCGAAATACTATCTGCCTTGAATACAAATGTTGCCTTAACTGATATGTTCAGGTTAACAAAATATTTTCAGAGAATGCTTTTGATGCCGTCATGCATTTTGCAGCGGTAGCATATGTTGGGGAGAGCACCCTTGATCCCCTGAAGTAAGTTTAAACTGTTAGAATTGCTATTTTTGGGTTGTCTGTCTCTGGTTTCTTGCACCATCATGTAGATTCTGATAGAAGATTGTTTTCCTATCCATAAATGGATTTGAGGTCTCAGCATATATGCAGACTGATGGATGGCCAACATTTTGCGAATAGATGGATGATTTTGAAAATTTGTTCATGATCATAACTTCTGGTCCATTGTTCTTATCAACCTGTTGATATAAATGTTTAAACTTGAATCAATAAAACAGTTCAATTGTTAGAAAAGGGAATCCGAAAAAGTTTCTCGTTTTCTTTGGGGTTGAGAGATGAGAAAACATGGAGGAACTGTTTTGAGTTTTAGCATTGATCATTTCTGAGGACGGTATTTCTTGTTGTAGGTATTATCACAATATTACTTCAAATACCTTGACAGTATTAGAATCAATGGCAGCACATGGTGTGAAGACATTGATCTATTCTAGTACATGTGCTACATATGGAGAGCCAGAAAAAATGCCTATCACTGAAGAAACTTCTCAGGTTCACATCAATGCATCTGCTTGCGTATTATTGTACTTTTGGAAAGATTTGGTATTGTCTTGTATGGATACAGCAGACTAGAGTTACTATTGATAAATATTTGGTTTGTTTTCATTTCAGGCCCCAATTAATCCTTATGGAAAAGCCAAGAAGATGGCAGAAGAAATTATCCTTGACTTTTCAAAAAATTCAAAGATGGCAGTCATGATCCTAAGGTTGTTATTTTACATTATAAACGGTGGTTCCTTACCCTTTTTTCTTTTTTGTGCCTATTTTCTATCTCGTAGAAGTTGCTACCAAAACAGTTTATTTTCATAACTATGTTTTAAATTTTCAAATTTCAGTTTTTTTCCTTGGTAATTTACTGTTCAAAATAGGAGGGAATTTGGAAACCTTTATCAAGTTTTTGTCGAGTGAACCATCTGAGTAAGCTATCTGATGCATGCATGTTTTGAAAATTATTCAGATACTTCAATGTGATTGGTTCTGATCCAGAGGGCAGACTTGGGGAAGCTCCTAGACCTGAGCTTCGTGAGCATGGACGTATTTCGGGTGCTTGTTTTGATGCTGCCCGTGGCATTATTTCTGGGCTTAAGGTAATTTGCTAGTCCAGCCATAGAAATATATAGTTAAGCAAGCATGAACGTATTATATAGTTACAAGATGAAGCTGGTGAATTAATGATTTGAGATATGCAATCAAGTGGGTAGCTGCTTTTGATGTTTTCAGGTCAAAGGAACAGATTACAAAACACATGATGGGACTTGCATACGGGATTATATCGACGTCACTGATCTCGTTGATGCTCATGTTAAAGCCCTGGAGAAGGCAATCCCTGGAAAAGTCGGAATTTACAATGTTGGAACGGGAAAAGGTAGGATGAAAAAAAAATCGTTGCAGTAGTGATACTTCTTTTTACCAACTTTTCATCTCATTGATGAAGAAGCAACTTCTAGACATGGAAATCTGAAGGTAGTTTTTGGTTGTTTTTTCTAATCAGGTCGATCAGTGAAGGAGTTTGTGGAGGCATGCAAGAAGGCAACTGGGGTGGACATCAAAGTGGACTATCTCCCTCGTCGACCAGGTGACTACGCCGAAGTATTTAGCAACCCCACTAAGATCAAGAAAGAACTGAACTGGACAGCGCAGCACACCGATCTTCAAGAAAGTTTAAGTGTTGCTTGGAGGTGGCAGAAGTCCCATCTGAATGGCTATGGAAATTCTTTGGTTATGTCTTCTTGAAGCACACTGATGATGATGGAAGCTAATAGGAGAAAGACTGAAAAAGAGGAGGAGGGAGCGTCTACTGACTTTGAGGATTTACTTCTTTTTTCACATACAAGTAGGAGAAAATACCATATTACTCTCTACATTTTTGTAGTCTATTTTACAATATTGTTTGTTGGTATAGGTAGAGCCATCCCATTTGTTATTATTATTATTATTATTATTATTATTGTTATTATTGTTATTATTCTTCTTATTATTATTATTATGTATTGGATATGATTGGTTATTAATAATGATTAATGAATGCATCATAGGGAGTAGAAGCATCTTGGATCATTGTCCT

Coding sequence (CDS)

ATGGCAGAAGAAATTATCCTTGACTTTTCAAAAAATTCAAAGATGGCAGTCATGATCCTAAGATACTTCAATGTGATTGGTTCTGATCCAGAGGGCAGACTTGGGGAAGCTCCTAGACCTGAGCTTCGTGAGCATGGACGTATTTCGGGTGCTTGTTTTGATGCTGCCCGTGGCATTATTTCTGGGCTTAAGGTCAAAGGAACAGATTACAAAACACATGATGGGACTTGCATACGGGATTATATCGACGTCACTGATCTCGTTGATGCTCATGTTAAAGCCCTGGAGAAGGCAATCCCTGGAAAAGTCGGAATTTACAATGTTGGAACGGGAAAAGGTCGATCAGTGAAGGAGTTTGTGGAGGCATGCAAGAAGGCAACTGGGGTGGACATCAAAGTGGACTATCTCCCTCGTCGACCAGGTGACTACGCCGAAGTATTTAGCAACCCCACTAAGATCAAGAAAGAACTGAACTGGACAGCGCAGCACACCGATCTTCAAGAAAGTTTAAGTGTTGCTTGGAGGTGGCAGAAGTCCCATCTGAATGGCTATGGAAATTCTTTGGTTATGTCTTCTTGA

Protein sequence

MAEEIILDFSKNSKMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIISGLKVKGTDYKTHDGTCIRDYIDVTDLVDAHVKALEKAIPGKVGIYNVGTGKGRSVKEFVEACKKATGVDIKVDYLPRRPGDYAEVFSNPTKIKKELNWTAQHTDLQESLSVAWRWQKSHLNGYGNSLVMSS
Homology
[Close]
BLAST of Cucsat.G8178.T12 vs. ExPASy Swiss-Prot
Match: Q9SA77 (UDP-arabinose 4-epimerase 1 OS=Arabidopsis thaliana OX=3702 GN=MUR4 PE=1 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 2.7e-92
Identity = 159/185 (85.95%), Postives = 174/185 (94.05%), Query Frame = 0 

Query: 1   MAEEIILDFSKNSKMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGII 60
           MAE+IILDFSKNS MAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGI+
Sbjct: 226 MAEDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIM 285

Query: 61  SGLKVKGTDYKTHDGTCIRDYIDVTDLVDAHVKALEKAIPGKVGIYNVGTGKGRSVKEFV 120
            GL++KGTDYKT DGTC+RDYIDVTDLVDAHVKAL+KA P KVGIYNVGTGKG SVKEFV
Sbjct: 286 PGLQIKGTDYKTADGTCVRDYIDVTDLVDAHVKALQKAKPRKVGIYNVGTGKGSSVKEFV 345

Query: 121 EACKKATGVDIKVDYLPRRPGDYAEVFSNPTKIKKELNWTAQHTDLQESLSVAWRWQKSH 180
           EACKKATGV+IK+DYLPRR GDYAEV+S+P+KI+KELNWTA+HT+L+ESL  AWRWQK H
Sbjct: 346 EACKKATGVEIKIDYLPRRAGDYAEVYSDPSKIRKELNWTAKHTNLKESLETAWRWQKLH 405

Query: 181 LNGYG 186
            NGYG
Sbjct: 406 RNGYG 410

[Close]
BLAST of Cucsat.G8178.T12 vs. ExPASy Swiss-Prot
Match: O64749 (Putative UDP-arabinose 4-epimerase 2 OS=Arabidopsis thaliana OX=3702 GN=At2g34850 PE=2 SV=3)

HSP 1 Score: 338.2 bits (866), Expect = 6.1e-92
Identity = 162/192 (84.38%), Postives = 178/192 (92.71%), Query Frame = 0 

Query: 1   MAEEIILDFSKNSKMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGII 60
           MAE+IILDFSKNS MAVMILRYFNVIGSDPEGRLGEAPRPEL EHGRISGACFDAARGII
Sbjct: 225 MAEDIILDFSKNSIMAVMILRYFNVIGSDPEGRLGEAPRPELSEHGRISGACFDAARGII 284

Query: 61  SGLKVKGTDYKTHDGTCIRDYIDVTDLVDAHVKALEKAIPGKVGIYNVGTGKGRSVKEFV 120
            GL++KGTDYKT DGTC+RDYIDVTDLVDAHVKALEKA P KVGI+NVGTGKG SVKEFV
Sbjct: 285 PGLQIKGTDYKTVDGTCVRDYIDVTDLVDAHVKALEKAKPRKVGIFNVGTGKGSSVKEFV 344

Query: 121 EACKKATGVDIKVDYLPRRPGDYAEVFSNPTKIKKELNWTAQHTDLQESLSVAWRWQKSH 180
           EACKKATGVDIKVDYL RR GDYAEV+S+P KIK+ELNWTA+HT+LQESL +AWRWQK H
Sbjct: 345 EACKKATGVDIKVDYLERRAGDYAEVYSDPRKIKEELNWTAKHTNLQESLKMAWRWQKLH 404

Query: 181 LNGYGNSLVMSS 193
            +GYG+S ++S+
Sbjct: 405 RSGYGSSSLVSA 416

[Close]
BLAST of Cucsat.G8178.T12 vs. ExPASy Swiss-Prot
Match: Q9SUN3 (Probable UDP-arabinose 4-epimerase 3 OS=Arabidopsis thaliana OX=3702 GN=At4g20460 PE=2 SV=3)

HSP 1 Score: 335.1 bits (858), Expect = 5.2e-91
Identity = 157/187 (83.96%), Postives = 176/187 (94.12%), Query Frame = 0 

Query: 1   MAEEIILDFSKNSKMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGII 60
           MAE++ILDFSKNS MAVMILRYFNVIGSDPEGRLGEAP+PELREHGRISGACFDAARG+I
Sbjct: 225 MAEDMILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPKPELREHGRISGACFDAARGVI 284

Query: 61  SGLKVKGTDYKTHDGTCIRDYIDVTDLVDAHVKALEKAIPGKVGIYNVGTGKGRSVKEFV 120
            GL+VKGTDYKT DGTC+RDYIDVTDLVDAHVKALEKA P  VGIYNVGTGKGRSVKEFV
Sbjct: 285 PGLQVKGTDYKTGDGTCVRDYIDVTDLVDAHVKALEKAKPRNVGIYNVGTGKGRSVKEFV 344

Query: 121 EACKKATGVDIKVDYLPRRPGDYAEVFSNPTKIKKELNWTAQHTDLQESLSVAWRWQKSH 180
           EACKKATGVDIKVD+LPRRPGDYAEV+S+P KI ++LNW+A++T+LQESL VAW+WQK+H
Sbjct: 345 EACKKATGVDIKVDFLPRRPGDYAEVYSDPAKILRDLNWSARYTNLQESLEVAWKWQKTH 404

Query: 181 LNGYGNS 188
            +GY +S
Sbjct: 405 PHGYASS 411

[Close]
BLAST of Cucsat.G8178.T12 vs. ExPASy Swiss-Prot
Match: Q8H930 (Probable UDP-arabinose 4-epimerase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=UEL-1 PE=2 SV=2)

HSP 1 Score: 332.4 bits (851), Expect = 3.4e-90
Identity = 161/187 (86.10%), Postives = 169/187 (90.37%), Query Frame = 0 

Query: 1   MAEEIILDFSKNSK--MAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARG 60
           MAE+IILDFSK+ K  MAVMILRYFNVIGSDPEGRLGEAP+PELREHGRISGACFDAA G
Sbjct: 228 MAEDIILDFSKSKKADMAVMILRYFNVIGSDPEGRLGEAPKPELREHGRISGACFDAALG 287

Query: 61  IISGLKVKGTDYKTHDGTCIRDYIDVTDLVDAHVKALEKAIPGKVGIYNVGTGKGRSVKE 120
           II GLKVKGTDY+T DGTC+RDYIDVTDLVDAHVKAL KA  GKVGIYNVGTGKGRSVKE
Sbjct: 288 IIPGLKVKGTDYETPDGTCVRDYIDVTDLVDAHVKALNKAERGKVGIYNVGTGKGRSVKE 347

Query: 121 FVEACKKATGVDIKVDYLPRRPGDYAEVFSNPTKIKKELNWTAQHTDLQESLSVAWRWQK 180
           FVEACKKATGVDIKVDY PRRPGDYAEV+S+P KI  ELNWTAQHTDL ESL VAW WQK
Sbjct: 348 FVEACKKATGVDIKVDYFPRRPGDYAEVYSDPAKINSELNWTAQHTDLLESLRVAWTWQK 407

Query: 181 SHLNGYG 186
            H +GYG
Sbjct: 408 KHRSGYG 414

[Close]
BLAST of Cucsat.G8178.T12 vs. ExPASy Swiss-Prot
Match: Q9FI17 (Putative UDP-arabinose 4-epimerase 4 OS=Arabidopsis thaliana OX=3702 GN=At5g44480 PE=3 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 7.5e-90
Identity = 159/186 (85.48%), Postives = 172/186 (92.47%), Query Frame = 0 

Query: 1   MAEEIILDFSKNSKMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGII 60
           MAE++ILDFSKNS MAVMILRYFNVIGSDP GRLGEAPRPELRE GRISGACFDAARG I
Sbjct: 250 MAEDMILDFSKNSDMAVMILRYFNVIGSDPGGRLGEAPRPELREQGRISGACFDAARGFI 309

Query: 61  SGLKVKGTDYKTHDGTCIRDYIDVTDLVDAHVKALEKAIPGKVGIYNVGTGKGRSVKEFV 120
            GL+VKGTDYKT DGTCIRDYIDVTDLVDAHVKALEKA P KVGIYNVGTGKGRSVKEFV
Sbjct: 310 PGLQVKGTDYKTSDGTCIRDYIDVTDLVDAHVKALEKAQPRKVGIYNVGTGKGRSVKEFV 369

Query: 121 EACKKATGVDIKVDYLPRRPGDYAEVFSNPTKIKKELNWTAQHTDLQESLSVAWRWQKSH 180
           EACKKATGV+IKVD+LPRRPGDYAEV+S+PTKI K+LNWTA+ T+LQ+SL VAWRWQK H
Sbjct: 370 EACKKATGVEIKVDFLPRRPGDYAEVYSDPTKILKDLNWTARFTNLQDSLQVAWRWQKIH 429

Query: 181 LNGYGN 187
            +GY +
Sbjct: 430 PHGYNS 435

[Close]
BLAST of Cucsat.G8178.T12 vs. NCBI nr
Match: XP_004135561.1 (UDP-arabinose 4-epimerase 1 [Cucumis sativus] >XP_031741914.1 UDP-arabinose 4-epimerase 1 [Cucumis sativus] >KGN65967.1 hypothetical protein Csa_023286 [Cucumis sativus])

HSP 1 Score: 392 bits (1007), Expect = 2.84e-134
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0 

Query: 1   MAEEIILDFSKNSKMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGII 60
           MAEEIILDFSKNSKMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGII
Sbjct: 226 MAEEIILDFSKNSKMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGII 285

Query: 61  SGLKVKGTDYKTHDGTCIRDYIDVTDLVDAHVKALEKAIPGKVGIYNVGTGKGRSVKEFV 120
           SGLKVKGTDYKTHDGTCIRDYIDVTDLVDAHVKALEKAIPGKVGIYNVGTGKGRSVKEFV
Sbjct: 286 SGLKVKGTDYKTHDGTCIRDYIDVTDLVDAHVKALEKAIPGKVGIYNVGTGKGRSVKEFV 345

Query: 121 EACKKATGVDIKVDYLPRRPGDYAEVFSNPTKIKKELNWTAQHTDLQESLSVAWRWQKSH 180
           EACKKATGVDIKVDYLPRRPGDYAEVFSNPTKIKKELNWTAQHTDLQESLSVAWRWQKSH
Sbjct: 346 EACKKATGVDIKVDYLPRRPGDYAEVFSNPTKIKKELNWTAQHTDLQESLSVAWRWQKSH 405

Query: 181 LNGYGNSLVMSS 192
           LNGYGNSLVMSS
Sbjct: 406 LNGYGNSLVMSS 417

[Close]
BLAST of Cucsat.G8178.T12 vs. NCBI nr
Match: XP_008459120.1 (PREDICTED: UDP-arabinose 4-epimerase 1-like [Cucumis melo] >XP_008459121.1 PREDICTED: UDP-arabinose 4-epimerase 1-like [Cucumis melo] >XP_016902341.1 PREDICTED: UDP-arabinose 4-epimerase 1-like [Cucumis melo])

HSP 1 Score: 388 bits (997), Expect = 9.37e-133
Identity = 190/192 (98.96%), Postives = 190/192 (98.96%), Query Frame = 0 

Query: 1   MAEEIILDFSKNSKMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGII 60
           MAEEIILDFSKNSKMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGII
Sbjct: 226 MAEEIILDFSKNSKMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGII 285

Query: 61  SGLKVKGTDYKTHDGTCIRDYIDVTDLVDAHVKALEKAIPGKVGIYNVGTGKGRSVKEFV 120
           SGLKVKGTDYKTHDGTCIRDYIDVTDLVDAHVKALEKA PGKVGIYNVGTGKGRSVKEFV
Sbjct: 286 SGLKVKGTDYKTHDGTCIRDYIDVTDLVDAHVKALEKATPGKVGIYNVGTGKGRSVKEFV 345

Query: 121 EACKKATGVDIKVDYLPRRPGDYAEVFSNPTKIKKELNWTAQHTDLQESLSVAWRWQKSH 180
           EACKKATGVDIKVDYLPRRPGDYAEVFSNPTKIK ELNWTAQHTDLQESLSVAWRWQKSH
Sbjct: 346 EACKKATGVDIKVDYLPRRPGDYAEVFSNPTKIKNELNWTAQHTDLQESLSVAWRWQKSH 405

Query: 181 LNGYGNSLVMSS 192
           LNGYGNSLVMSS
Sbjct: 406 LNGYGNSLVMSS 417

[Close]
BLAST of Cucsat.G8178.T12 vs. NCBI nr
Match: KAA0043345.1 (UDP-arabinose 4-epimerase 1-like [Cucumis melo var. makuwa] >TYK02675.1 UDP-arabinose 4-epimerase 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 388 bits (997), Expect = 2.96e-132
Identity = 190/192 (98.96%), Postives = 190/192 (98.96%), Query Frame = 0 

Query: 1   MAEEIILDFSKNSKMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGII 60
           MAEEIILDFSKNSKMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGII
Sbjct: 261 MAEEIILDFSKNSKMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGII 320

Query: 61  SGLKVKGTDYKTHDGTCIRDYIDVTDLVDAHVKALEKAIPGKVGIYNVGTGKGRSVKEFV 120
           SGLKVKGTDYKTHDGTCIRDYIDVTDLVDAHVKALEKA PGKVGIYNVGTGKGRSVKEFV
Sbjct: 321 SGLKVKGTDYKTHDGTCIRDYIDVTDLVDAHVKALEKATPGKVGIYNVGTGKGRSVKEFV 380

Query: 121 EACKKATGVDIKVDYLPRRPGDYAEVFSNPTKIKKELNWTAQHTDLQESLSVAWRWQKSH 180
           EACKKATGVDIKVDYLPRRPGDYAEVFSNPTKIK ELNWTAQHTDLQESLSVAWRWQKSH
Sbjct: 381 EACKKATGVDIKVDYLPRRPGDYAEVFSNPTKIKNELNWTAQHTDLQESLSVAWRWQKSH 440

Query: 181 LNGYGNSLVMSS 192
           LNGYGNSLVMSS
Sbjct: 441 LNGYGNSLVMSS 452

[Close]
BLAST of Cucsat.G8178.T12 vs. NCBI nr
Match: XP_022926994.1 (UDP-arabinose 4-epimerase 1-like [Cucurbita moschata])

HSP 1 Score: 385 bits (989), Expect = 1.54e-131
Identity = 187/192 (97.40%), Postives = 190/192 (98.96%), Query Frame = 0 

Query: 1   MAEEIILDFSKNSKMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGII 60
           MAEEIILDFSK+SKMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGI+
Sbjct: 226 MAEEIILDFSKDSKMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIV 285

Query: 61  SGLKVKGTDYKTHDGTCIRDYIDVTDLVDAHVKALEKAIPGKVGIYNVGTGKGRSVKEFV 120
           SGLKVKGTDYKTHDGTCIRDYIDVTDLVDAHVKALEKA PGKVGIYNVGTGKGRSVKEFV
Sbjct: 286 SGLKVKGTDYKTHDGTCIRDYIDVTDLVDAHVKALEKATPGKVGIYNVGTGKGRSVKEFV 345

Query: 121 EACKKATGVDIKVDYLPRRPGDYAEVFSNPTKIKKELNWTAQHTDLQESLSVAWRWQKSH 180
           EACKKATGVDIKVDYLPRRPGDYAEVFSNPTKIKKELNWTAQHTDLQESL VAWRWQKSH
Sbjct: 346 EACKKATGVDIKVDYLPRRPGDYAEVFSNPTKIKKELNWTAQHTDLQESLEVAWRWQKSH 405

Query: 181 LNGYGNSLVMSS 192
           +NGYGNSLVMSS
Sbjct: 406 VNGYGNSLVMSS 417

[Close]
BLAST of Cucsat.G8178.T12 vs. NCBI nr
Match: XP_023000738.1 (UDP-arabinose 4-epimerase 1 [Cucurbita maxima] >XP_023000739.1 UDP-arabinose 4-epimerase 1 [Cucurbita maxima])

HSP 1 Score: 384 bits (985), Expect = 6.23e-131
Identity = 187/192 (97.40%), Postives = 189/192 (98.44%), Query Frame = 0 

Query: 1   MAEEIILDFSKNSKMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGII 60
           MAEEIILDFSK+SKMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGII
Sbjct: 226 MAEEIILDFSKDSKMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGII 285

Query: 61  SGLKVKGTDYKTHDGTCIRDYIDVTDLVDAHVKALEKAIPGKVGIYNVGTGKGRSVKEFV 120
           SGLKVKGTDYKTHDGTCIRDYIDVTDLVDAHVKALEKA PGKVGIYNVGTGKGRSVKEFV
Sbjct: 286 SGLKVKGTDYKTHDGTCIRDYIDVTDLVDAHVKALEKATPGKVGIYNVGTGKGRSVKEFV 345

Query: 121 EACKKATGVDIKVDYLPRRPGDYAEVFSNPTKIKKELNWTAQHTDLQESLSVAWRWQKSH 180
           EACKKATGVDIKVDYLPRRPGDYAEVFSNPTKIK ELNWTAQHTDLQESL VAWRWQKSH
Sbjct: 346 EACKKATGVDIKVDYLPRRPGDYAEVFSNPTKIKNELNWTAQHTDLQESLEVAWRWQKSH 405

Query: 181 LNGYGNSLVMSS 192
           +NGYGNSLVMSS
Sbjct: 406 VNGYGNSLVMSS 417

[Close]
BLAST of Cucsat.G8178.T12 vs. ExPASy TrEMBL
Match: A0A0A0LYQ1 (NAD(P)-bd_dom domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G554540 PE=4 SV=1)

HSP 1 Score: 392 bits (1007), Expect = 1.37e-134
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0 

Query: 1   MAEEIILDFSKNSKMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGII 60
           MAEEIILDFSKNSKMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGII
Sbjct: 226 MAEEIILDFSKNSKMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGII 285

Query: 61  SGLKVKGTDYKTHDGTCIRDYIDVTDLVDAHVKALEKAIPGKVGIYNVGTGKGRSVKEFV 120
           SGLKVKGTDYKTHDGTCIRDYIDVTDLVDAHVKALEKAIPGKVGIYNVGTGKGRSVKEFV
Sbjct: 286 SGLKVKGTDYKTHDGTCIRDYIDVTDLVDAHVKALEKAIPGKVGIYNVGTGKGRSVKEFV 345

Query: 121 EACKKATGVDIKVDYLPRRPGDYAEVFSNPTKIKKELNWTAQHTDLQESLSVAWRWQKSH 180
           EACKKATGVDIKVDYLPRRPGDYAEVFSNPTKIKKELNWTAQHTDLQESLSVAWRWQKSH
Sbjct: 346 EACKKATGVDIKVDYLPRRPGDYAEVFSNPTKIKKELNWTAQHTDLQESLSVAWRWQKSH 405

Query: 181 LNGYGNSLVMSS 192
           LNGYGNSLVMSS
Sbjct: 406 LNGYGNSLVMSS 417

[Close]
BLAST of Cucsat.G8178.T12 vs. ExPASy TrEMBL
Match: A0A1S3CA02 (UDP-arabinose 4-epimerase 1-like OS=Cucumis melo OX=3656 GN=LOC103498322 PE=4 SV=1)

HSP 1 Score: 388 bits (997), Expect = 4.54e-133
Identity = 190/192 (98.96%), Postives = 190/192 (98.96%), Query Frame = 0 

Query: 1   MAEEIILDFSKNSKMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGII 60
           MAEEIILDFSKNSKMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGII
Sbjct: 226 MAEEIILDFSKNSKMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGII 285

Query: 61  SGLKVKGTDYKTHDGTCIRDYIDVTDLVDAHVKALEKAIPGKVGIYNVGTGKGRSVKEFV 120
           SGLKVKGTDYKTHDGTCIRDYIDVTDLVDAHVKALEKA PGKVGIYNVGTGKGRSVKEFV
Sbjct: 286 SGLKVKGTDYKTHDGTCIRDYIDVTDLVDAHVKALEKATPGKVGIYNVGTGKGRSVKEFV 345

Query: 121 EACKKATGVDIKVDYLPRRPGDYAEVFSNPTKIKKELNWTAQHTDLQESLSVAWRWQKSH 180
           EACKKATGVDIKVDYLPRRPGDYAEVFSNPTKIK ELNWTAQHTDLQESLSVAWRWQKSH
Sbjct: 346 EACKKATGVDIKVDYLPRRPGDYAEVFSNPTKIKNELNWTAQHTDLQESLSVAWRWQKSH 405

Query: 181 LNGYGNSLVMSS 192
           LNGYGNSLVMSS
Sbjct: 406 LNGYGNSLVMSS 417

[Close]
BLAST of Cucsat.G8178.T12 vs. ExPASy TrEMBL
Match: A0A5A7TPK5 (UDP-arabinose 4-epimerase 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1734G00220 PE=4 SV=1)

HSP 1 Score: 388 bits (997), Expect = 1.43e-132
Identity = 190/192 (98.96%), Postives = 190/192 (98.96%), Query Frame = 0 

Query: 1   MAEEIILDFSKNSKMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGII 60
           MAEEIILDFSKNSKMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGII
Sbjct: 261 MAEEIILDFSKNSKMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGII 320

Query: 61  SGLKVKGTDYKTHDGTCIRDYIDVTDLVDAHVKALEKAIPGKVGIYNVGTGKGRSVKEFV 120
           SGLKVKGTDYKTHDGTCIRDYIDVTDLVDAHVKALEKA PGKVGIYNVGTGKGRSVKEFV
Sbjct: 321 SGLKVKGTDYKTHDGTCIRDYIDVTDLVDAHVKALEKATPGKVGIYNVGTGKGRSVKEFV 380

Query: 121 EACKKATGVDIKVDYLPRRPGDYAEVFSNPTKIKKELNWTAQHTDLQESLSVAWRWQKSH 180
           EACKKATGVDIKVDYLPRRPGDYAEVFSNPTKIK ELNWTAQHTDLQESLSVAWRWQKSH
Sbjct: 381 EACKKATGVDIKVDYLPRRPGDYAEVFSNPTKIKNELNWTAQHTDLQESLSVAWRWQKSH 440

Query: 181 LNGYGNSLVMSS 192
           LNGYGNSLVMSS
Sbjct: 441 LNGYGNSLVMSS 452

[Close]
BLAST of Cucsat.G8178.T12 vs. ExPASy TrEMBL
Match: A0A6J1EGR1 (UDP-arabinose 4-epimerase 1-like OS=Cucurbita moschata OX=3662 GN=LOC111433959 PE=4 SV=1)

HSP 1 Score: 385 bits (989), Expect = 7.44e-132
Identity = 187/192 (97.40%), Postives = 190/192 (98.96%), Query Frame = 0 

Query: 1   MAEEIILDFSKNSKMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGII 60
           MAEEIILDFSK+SKMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGI+
Sbjct: 226 MAEEIILDFSKDSKMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIV 285

Query: 61  SGLKVKGTDYKTHDGTCIRDYIDVTDLVDAHVKALEKAIPGKVGIYNVGTGKGRSVKEFV 120
           SGLKVKGTDYKTHDGTCIRDYIDVTDLVDAHVKALEKA PGKVGIYNVGTGKGRSVKEFV
Sbjct: 286 SGLKVKGTDYKTHDGTCIRDYIDVTDLVDAHVKALEKATPGKVGIYNVGTGKGRSVKEFV 345

Query: 121 EACKKATGVDIKVDYLPRRPGDYAEVFSNPTKIKKELNWTAQHTDLQESLSVAWRWQKSH 180
           EACKKATGVDIKVDYLPRRPGDYAEVFSNPTKIKKELNWTAQHTDLQESL VAWRWQKSH
Sbjct: 346 EACKKATGVDIKVDYLPRRPGDYAEVFSNPTKIKKELNWTAQHTDLQESLEVAWRWQKSH 405

Query: 181 LNGYGNSLVMSS 192
           +NGYGNSLVMSS
Sbjct: 406 VNGYGNSLVMSS 417

[Close]
BLAST of Cucsat.G8178.T12 vs. ExPASy TrEMBL
Match: A0A6J1KKT8 (UDP-arabinose 4-epimerase 1 OS=Cucurbita maxima OX=3661 GN=LOC111495097 PE=4 SV=1)

HSP 1 Score: 384 bits (985), Expect = 3.01e-131
Identity = 187/192 (97.40%), Postives = 189/192 (98.44%), Query Frame = 0 

Query: 1   MAEEIILDFSKNSKMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGII 60
           MAEEIILDFSK+SKMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGII
Sbjct: 226 MAEEIILDFSKDSKMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGII 285

Query: 61  SGLKVKGTDYKTHDGTCIRDYIDVTDLVDAHVKALEKAIPGKVGIYNVGTGKGRSVKEFV 120
           SGLKVKGTDYKTHDGTCIRDYIDVTDLVDAHVKALEKA PGKVGIYNVGTGKGRSVKEFV
Sbjct: 286 SGLKVKGTDYKTHDGTCIRDYIDVTDLVDAHVKALEKATPGKVGIYNVGTGKGRSVKEFV 345

Query: 121 EACKKATGVDIKVDYLPRRPGDYAEVFSNPTKIKKELNWTAQHTDLQESLSVAWRWQKSH 180
           EACKKATGVDIKVDYLPRRPGDYAEVFSNPTKIK ELNWTAQHTDLQESL VAWRWQKSH
Sbjct: 346 EACKKATGVDIKVDYLPRRPGDYAEVFSNPTKIKNELNWTAQHTDLQESLEVAWRWQKSH 405

Query: 181 LNGYGNSLVMSS 192
           +NGYGNSLVMSS
Sbjct: 406 VNGYGNSLVMSS 417

The following BLAST results are available for this feature:
BLAST of Cucsat.G8178.T12 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SA772.7e-9285.95UDP-arabinose 4-epimerase 1 OS=Arabidopsis thaliana OX=3702 GN=MUR4 PE=1 SV=1[more]
O647496.1e-9284.38Putative UDP-arabinose 4-epimerase 2 OS=Arabidopsis thaliana OX=3702 GN=At2g3485... [more]
Q9SUN35.2e-9183.96Probable UDP-arabinose 4-epimerase 3 OS=Arabidopsis thaliana OX=3702 GN=At4g2046... [more]
Q8H9303.4e-9086.10Probable UDP-arabinose 4-epimerase 1 OS=Oryza sativa subsp. japonica OX=39947 GN... [more]
Q9FI177.5e-9085.48Putative UDP-arabinose 4-epimerase 4 OS=Arabidopsis thaliana OX=3702 GN=At5g4448... [more]
BLAST of Cucsat.G8178.T12 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004135561.12.84e-134100.00UDP-arabinose 4-epimerase 1 [Cucumis sativus] >XP_031741914.1 UDP-arabinose 4-ep... [more]
XP_008459120.19.37e-13398.96PREDICTED: UDP-arabinose 4-epimerase 1-like [Cucumis melo] >XP_008459121.1 PREDI... [more]
KAA0043345.12.96e-13298.96UDP-arabinose 4-epimerase 1-like [Cucumis melo var. makuwa] >TYK02675.1 UDP-arab... [more]
XP_022926994.11.54e-13197.40UDP-arabinose 4-epimerase 1-like [Cucurbita moschata][more]
XP_023000738.16.23e-13197.40UDP-arabinose 4-epimerase 1 [Cucurbita maxima] >XP_023000739.1 UDP-arabinose 4-e... [more]
BLAST of Cucsat.G8178.T12 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LYQ11.37e-134100.00NAD(P)-bd_dom domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G5545... [more]
A0A1S3CA024.54e-13398.96UDP-arabinose 4-epimerase 1-like OS=Cucumis melo OX=3656 GN=LOC103498322 PE=4 SV... [more]
A0A5A7TPK51.43e-13298.96UDP-arabinose 4-epimerase 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... [more]
A0A6J1EGR17.44e-13297.40UDP-arabinose 4-epimerase 1-like OS=Cucurbita moschata OX=3662 GN=LOC111433959 P... [more]
A0A6J1KKT83.01e-13197.40UDP-arabinose 4-epimerase 1 OS=Cucurbita maxima OX=3661 GN=LOC111495097 PE=4 SV=... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.720coord: 1..116
e-value: 2.0E-50
score: 173.9
NoneNo IPR availableGENE3D3.90.25.10coord: 34..177
e-value: 2.0E-50
score: 173.9
NoneNo IPR availablePANTHERPTHR43349:SF79UDP-ARABINOSE 4-EPIMERASE-RELATEDcoord: 1..180
NoneNo IPR availablePANTHERPTHR43349PINORESINOL REDUCTASE-RELATEDcoord: 1..180
IPR016040NAD(P)-binding domainPFAMPF16363GDP_Man_Dehydcoord: 2..163
e-value: 7.6E-10
score: 38.7
IPR036291NAD(P)-binding domain superfamilySUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 1..184

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cucsat.G8178Cucsat.G8178gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G8178.T12.E1Cucsat.G8178.T12.E1exon
Cucsat.G8178.T12.E2Cucsat.G8178.T12.E2exon
Cucsat.G8178.T12.E3Cucsat.G8178.T12.E3exon
Cucsat.G8178.T12.E4Cucsat.G8178.T12.E4exon
Cucsat.G8178.T12.E5Cucsat.G8178.T12.E5exon
Cucsat.G8178.T12.E6Cucsat.G8178.T12.E6exon
Cucsat.G8178.T12.E7Cucsat.G8178.T12.E7exon
Cucsat.G8178.T12.E8Cucsat.G8178.T12.E8exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G8178.T12.C1Cucsat.G8178.T12.C1CDS
Cucsat.G8178.T12.C2Cucsat.G8178.T12.C2CDS
Cucsat.G8178.T12.C3Cucsat.G8178.T12.C3CDS
Cucsat.G8178.T12.C4Cucsat.G8178.T12.C4CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cucsat.G8178.T12Cucsat.G8178.T12-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006012 galactose metabolic process
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0050373 UDP-arabinose 4-epimerase activity
molecular_function GO:0003978 UDP-glucose 4-epimerase activity