Cucsat.G8178 (gene) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TTGAATATTGAAATAAAGAGGAGAGGAGAGGAGAGAAACTGAGAAATATAACGATGCGAGGCGCGTGGTATATACGCGCTAAATACAATGTGGACAAACAGACAGCTCCCTGCTCCGTCGTCCGCTCCAAACAGAACTTCACCTTCTTCTTCTCTTTCCCCTTCTTTCCTTTATTTTCATTTACTTTCTGATTCGATTCCATTAACGACGCCCCCCATTTTTACGTTCTCTCTCATTTTCTCACAATACCCACATCCCCATTTTTTTTTTTTTTTGTTCTTTCTTCCTCCAATTTCAATTCCTCTCCCCCACTTCCATTCAATTCCTGGTAACATTCTCCTCTTTCTCTTCTTTTCCTTTTCTGGGTCTTCCTTCGTTTCATGTAATCTGTTTTCCCTTTTCATCTTTTTTCTTTATAATTTGCTTTTCATGAAGATCTTTTGATTCACAAATGCCAAAATTCAAACGGCCTTCTTTCTAATCATCTTCCTTCTACTGTTTCTCTCTTGTTTCCCATTTTTCAGTTACTTCTTTGCGATCAAAGCCGTTCAGTTACCTCGACGTGTACGTTTTTATTTTGATGATTACGTTACTTTTTGTTTTCGTTTTTTGTTTTTATTATGTGGGATTCTCTTCCTTTCATCTCCGCTTTCATCTCTGTTTAGGGATTGATTTCTTTCTTCTTTACTCGTTGAAAGTGGAAATGACTGGTCAGATGATTGTTGTTTTTTAAGAAAATTTTATTTTTTAGTGTCATTCTTGTAATGGTTACTTGGAATGGGAATTGATCTGTATTTTTAAATTTGTGGTTTGATTGGTACTTGGTTTCCATTAATGCATGCTGATTACTATAATTTGCATTATACTTTTTCTAATCTTATCAGCATCTATGAAGTGGAGTTGGTTTTTTTCTTTTGGTTCTTTCTTGTTATGTAGTTTGAAAAAAGAAGTTATTATTTTTTATATTTCCTAATTTTTTTTTTAAAAAAAAATTGATTTTTGTTTATATTTGTGTTTTGCTTTTGATTTCTGCTTATGGGGTTTTCTCCTGATAGTATTTTGTCTCCATTTGTCATTCAGAAGTTTTGAGATTTGAAAGTAATCATATCTTGAGGTTTCACATTTGTGGCTAGTTTAGTTTCAGAATTTACTGATATGTTTTTGGTTAATTTTGCAGGATTTTATACCACAGCTCCATCTGTGAAGTAGACTCATTGAGTTACTGTCCTATAATATTACGAGAGATAGAGCAATTTCCCAAATGCTCAGTTTTGGTAGGTCGAGAAATCAATCAAGGTTCGGGAGATCTGTGTCATTTGGAGGTGAGTTTCTCTTCTATAGTGTTTTAGAAAAATTATGTTTATTGCAACTATGGATGTTTCAAACTTTTAAGTTGCTTGAAAATATGTGAAAATTGTAGCTCTTTAAGATTTTCAAATTTTTTTACTTGTTTTTCTTGCATGGACCTATCTTTTCCCTTGTAGGTATGGATTATCCTGATCCCAAACGGAAGAACAATTTTGTTGGAAAGATCATCTTGGCTGCTTCACTTACTGCAATTTGTATTGTTATGCTCAAGCAATCCCCAAATTTTAGCACCCCAACCCCGGTAGCTCTCAATCTCTAATGATAATTTTATGACTTTATATCACTTCTGACCAAGTACATTCCGTGATTATATTATTTTCTATTGGAAGCTACAAGTCCTGTCGGAAGGATATTTAGACTTTTCACTTGTTATGTGGACTGTCATGTACCAGATCATATTTTACAAGTTTGGTTTAAGGAAATATTATTGTACAATAGCAATACAGCTGCTAATCAATTTCTTTATTTAATTGTACATCATAGTGCATACTCTAATCCCGTGTTTATGTTATTTCATTGCTACGATAAATGTAGGGTTGTATGCATTTCGTTTGTAGGTTGTTTCCAACATCATTTGGCTGATGCAATCGTTTAATTGTAGTTCTGATCTAAGAGGCCAAAAACTGTTCTTTGCTCCAAGATTTGTTTTTATTCACCATTGGCTCTTCTCTGTTTCTGTTTAAAAATTGCTGTCATTTTCAATGAACTTAGCAGTTCTTAGTTTACAAAGTTGCTCCATTGAATTTCCTTCAACTTGTTCTTTTAATTTTAGTTTTAGAATTCTGATCTGATATTTTTTGGGCAGCAGTCAAATAATTGATAACTCTCTCTCTCTCTCTCTCTCTCTCTCGCAGATAAAGCTCTTATATCTGGTGCTCTTTGTGATCAATTTTGTAGACACCCATCTTAATATTTTTGCTTTTAAACTCCTTGGCTTATTTAGAGGATTTCTTATTTCTAAACCTGCCTTTATTGGGCAATGAAAGAACTTTTCTTATCGAAAAAAGACTTGTTGAGAATCAACTTTTCCTAAAAGAATCACTCTTTTATGTAATTTCTAAAGTTGTGCATGTTTTTTTTCCTTCCAGTTTGCAAGTCATCAACTAGGAGTTACTCATGTTCTAGTAACAGGAGGTGCAGGATACATTGGCTCGCATGCTGCACTTCGATTATTAAAGGACTCATACCGTGTAACAATTGTGGTATGACACTTTTTAATATTGTATTTGTACCCTTTTCATATCTTTGGTGTTATACCCTATTAATAATTCAATCACGTCAGGACAACCTATCACGAGGAAACCTAGGTGCTGTGAAGGTTTTGCAAGAATTGTTTCCAGAATATGGAAGGCTTCAGTTCATCTATGCTGACTTGGGAGATGCAAAATCCGTATCCTTTCTACTTGACATGTTATGATTTATATTTCTGAAGAATACTCGAAATACTATCTGCCTTGAATACAAATGTTGCCTTAACTGATATGTTCAGGTTAACAAAATATTTTCAGAGAATGCTTTTGATGCCGTCATGCATTTTGCAGCGGTAGCATATGTTGGGGAGAGCACCCTTGATCCCCTGAAGTAAGTTTAAACTGTTAGAATTGCTATTTTTGGGTTGTCTGTCTCTGGTTTCTTGCACCATCATGTAGATTCTGATAGAAGATTGTTTTCCTATCCATAAATGGATTTGAGGTCTCAGCATATATGCAGACTGATGGATGGCCAACATTTTGCGAATAGATGGATGATTTTGAAAATTTGTTCATGATCATAACTTCTGGTCCATTGTTCTTATCAACCTGTTGATATAAATGTTTAAACTTGAATCAATAAAACAGTTCAATTGTTAGAAAAGGGAATCCGAAAAAGTTTCTCGTTTTCTTTGGGGTTGAGAGATGAGAAAACATGGAGGAACTGTTTTGAGTTTTAGCATTGATCATTTCTGAGGACGGTATTTCTTGTTGTAGGTATTATCACAATATTACTTCAAATACCTTGACAGTATTAGAATCAATGGCAGCACATGGTGTGAAGACATTGATCTATTCTAGTACATGTGCTACATATGGAGAGCCAGAAAAAATGCCTATCACTGAAGAAACTTCTCAGGTTCACATCAATGCATCTGCTTGCGTATTATTGTACTTTTGGAAAGATTTGGTATTGTCTTGTATGGATACAGCAGACTAGAGTTACTATTGATAAATATTTGGTTTGTTTTCATTTCAGGCCCCAATTAATCCTTATGGAAAAGCCAAGAAGATGGCAGAAGAAATTATCCTTGACTTTTCAAAAAATTCAAAGATGGCAGTCATGATCCTAAGGTTGTTATTTTACATTATAAACGGTGGTTCCTTACCCTTTTTTCTTTTTTGTGCCTATTTTCTATCTCGTAGAAGTTGCTACCAAAACAGTTTATTTTCATAACTATGTTTTAAATTTTCAAATTTCAGTTTTTTTCCTTGGTAATTTACTGTTCAAAATAGGAGGGAATTTGGAAACCTTTATCAAGTTTTTGTCGAGTGAACCATCTGAGTAAGCTATCTGATGCATGCATGTTTTGAAAATTATTCAGATACTTCAATGTGATTGGTTCTGATCCAGAGGGCAGACTTGGGGAAGCTCCTAGACCTGAGCTTCGTGAGCATGGACGTATTTCGGGTGCTTGTTTTGATGCTGCCCGTGGCATTATTTCTGGGCTTAAGGTAATTTGCTAGTCCAGCCATAGAAATATATAGTTAAGCAAGCATGAACGTATTATATAGTTACAAGATGAAGCTGGTGAATTAATGATTTGAGATATGCAATCAAGTGGGTAGCTGCTTTTGATGTTTTCAGGTCAAAGGAACAGATTACAAAACACATGATGGGACTTGCATACGGGATTATATCGACGTCACTGATCTCGTTGATGCTCATGTTAAAGCCCTGGAGAAGGCAATCCCTGGAAAAGTCGGAATTTACAATGTTGGAACGGGAAAAGGTAGGATGAAAAAAAAATCGTTGCAGTAGTGATACTTCTTTTTACCAACTTTTCATCTCATTGATGAAGAAGCAACTTCTAGACATGGAAATCTGAAGGTAGTTTTTGGTTGTTTTTTCTAATCAGGTCGATCAGTGAAGGAGTTTGTGGAGGCATGCAAGAAGGCAACTGGGGTGGACATCAAAGTGGACTATCTCCCTCGTCGACCAGGTGACTACGCCGAAGTATTTAGCAACCCCACTAAGATCAAGAAAGAACTGAACTGGACAGCGCAGCACACCGATCTTCAAGAAAGTTTAAGTGTTGCTTGGAGGTGGCAGAAGTCCCATCTGAATGGCTATGGAAATTCTTTGGTTATGTCTTCTTGAAGCACACTGATGATGATGGAAGCTAATAGGAGAAAGACTGAAAAAGAGGAGGAGGGAGCGTCTACTGACTTTGAGGATTTACTTCTTTTTTCACATACAAGTAGGAGAAAATACCATATTACTCTCTACATTTTTGTAGTCTATTTTACAATATTGTTTGTTGGTATAGGTAGAGCCATCCCATTTGTTATTATTATTATTATTATTATTATTATTGTTATTATTGTTATTATTCTTCTTATTATTATTATTATGTATTGGATATGATTGGTTATTAATAATGATTAATGAATGCATCATAGGGAGTAGAAGCATCTTGGA ATGCTCAGTTTTGGTAGGTCGAGAAATCAATCAAGGTTCGGGAGATCTGTGTCATTTGGAGGTATGGATTATCCTGATCCCAAACGGAAGAACAATTTTGTTGGAAAGATCATCTTGGCTGCTTCACTTACTGCAATTTGTATTGTTATGCTCAAGCAATCCCCAAATTTTAGCACCCCAACCCCGTTTGCAAGTCATCAACTAGGAGTTACTCATGTTCTAGTAACAGGAGGTGCAGGATACATTGGCTCGCATGCTGCACTTCGATTATTAAAGGACTCATACCGTGTAACAATTGTGGACAACCTATCACGAGGAAACCTAGGTGCTGTGAAGGTTTTGCAAGAATTGTTTCCAGAATATGGAAGGCTTCAGTTCATCTATGCTGACTTGGGAGATGCAAAATCCGTTAACAAAATATTTTCAGAGAATGCTTTTGATGCCGTCATGCATTTTGCAGCGGTAGCATATGTTGGGGAGAGCACCCTTGATCCCCTGAAGTATTATCACAATATTACTTCAAATACCTTGACAGTATTAGAATCAATGGCAGCACATGGTGTGAAGACATTGATCTATTCTAGTACATGTGCTACATATGGAGAGCCAGAAAAAATGCCTATCACTGAAGAAACTTCTCAGGCCCCAATTAATCCTTATGGAAAAGCCAAGAAGATGGCAGAAGAAATTATCCTTGACTTTTCAAAAAATTCAAAGATGGCAGTCATGATCCTAAGATACTTCAATGTGATTGGTTCTGATCCAGAGGGCAGACTTGGGGAAGCTCCTAGACCTGAGCTTCGTGAGCATGGACGTATTTCGGGTGCTTGTTTTGATGCTGCCCGTGGCATTATTTCTGGGCTTAAGGTCAAAGGAACAGATTACAAAACACATGATGGGACTTGCATACGGGATTATATCGACGTCACTGATCTCGTTGATGCTCATGTTAAAGCCCTGGAGAAGGCAATCCCTGGAAAAGTCGGAATTTACAATGTTGGAACGGGAAAAGGTCGATCAGTGAAGGAGTTTGTGGAGGCATGCAAGAAGGCAACTGGGGTGGACATCAAAGTGGACTATCTCCCTCGTCGACCAGGTGACTACGCCGAAGTATTTAGCAACCCCACTAAGATCAAGAAAGAACTGAACTGGACAGCGCAGCACACCGATCTTCAAGAAAGTTTAAGTGTTGCTTGGAGGTGGCAGAAGTCCCATCTGAATGGCTATGGAAATTCTTTGGTTATGTCTTCTTGA MLSFGRSRNQSRFGRSVSFGGMDYPDPKRKNNFVGKIILAASLTAICIVMLKQSPNFSTPTPFASHQLGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNLGAVKVLQELFPEYGRLQFIYADLGDAKSVNKIFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLTVLESMAAHGVKTLIYSSTCATYGEPEKMPITEETSQAPINPYGKAKKMAEEIILDFSKNSKMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIISGLKVKGTDYKTHDGTCIRDYIDVTDLVDAHVKALEKAIPGKVGIYNVGTGKGRSVKEFVEACKKATGVDIKVDYLPRRPGDYAEVFSNPTKIKKELNWTAQHTDLQESLSVAWRWQKSHLNGYGNSLVMSS Homology
BLAST of Cucsat.G8178 vs. ExPASy Swiss-Prot
Match: Q9SA77 (UDP-arabinose 4-epimerase 1 OS=Arabidopsis thaliana OX=3702 GN=MUR4 PE=1 SV=1) HSP 1 Score: 411.8 bits (1057), Expect = 5.7e-114 Identity = 204/246 (82.93%), Postives = 225/246 (91.46%), Query Frame = 0
BLAST of Cucsat.G8178 vs. ExPASy Swiss-Prot
Match: O64749 (Putative UDP-arabinose 4-epimerase 2 OS=Arabidopsis thaliana OX=3702 GN=At2g34850 PE=2 SV=3) HSP 1 Score: 395.2 bits (1014), Expect = 5.6e-109 Identity = 198/246 (80.49%), Postives = 221/246 (89.84%), Query Frame = 0
BLAST of Cucsat.G8178 vs. ExPASy Swiss-Prot
Match: Q9SUN3 (Probable UDP-arabinose 4-epimerase 3 OS=Arabidopsis thaliana OX=3702 GN=At4g20460 PE=2 SV=3) HSP 1 Score: 386.7 bits (992), Expect = 2.0e-106 Identity = 197/246 (80.08%), Postives = 218/246 (88.62%), Query Frame = 0
BLAST of Cucsat.G8178 vs. ExPASy Swiss-Prot
Match: Q8H0B6 (Probable UDP-arabinose 4-epimerase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=UEL-2 PE=2 SV=1) HSP 1 Score: 365.5 bits (937), Expect = 4.7e-100 Identity = 179/225 (79.56%), Postives = 204/225 (90.67%), Query Frame = 0
BLAST of Cucsat.G8178 vs. ExPASy Swiss-Prot
Match: Q8H930 (Probable UDP-arabinose 4-epimerase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=UEL-1 PE=2 SV=2) HSP 1 Score: 360.1 bits (923), Expect = 2.0e-98 Identity = 188/250 (75.20%), Postives = 212/250 (84.80%), Query Frame = 0
BLAST of Cucsat.G8178 vs. NCBI nr
Match: XP_004135561.1 (UDP-arabinose 4-epimerase 1 [Cucumis sativus] >XP_031741914.1 UDP-arabinose 4-epimerase 1 [Cucumis sativus] >KGN65967.1 hypothetical protein Csa_023286 [Cucumis sativus]) HSP 1 Score: 488 bits (1257), Expect = 3.35e-171 Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 0
BLAST of Cucsat.G8178 vs. NCBI nr
Match: XP_008459120.1 (PREDICTED: UDP-arabinose 4-epimerase 1-like [Cucumis melo] >XP_008459121.1 PREDICTED: UDP-arabinose 4-epimerase 1-like [Cucumis melo] >XP_016902341.1 PREDICTED: UDP-arabinose 4-epimerase 1-like [Cucumis melo]) HSP 1 Score: 483 bits (1244), Expect = 3.18e-169 Identity = 241/246 (97.97%), Postives = 245/246 (99.59%), Query Frame = 0
BLAST of Cucsat.G8178 vs. NCBI nr
Match: XP_038893619.1 (UDP-arabinose 4-epimerase 1-like [Benincasa hispida] >XP_038893621.1 UDP-arabinose 4-epimerase 1-like [Benincasa hispida]) HSP 1 Score: 478 bits (1231), Expect = 3.02e-167 Identity = 239/246 (97.15%), Postives = 242/246 (98.37%), Query Frame = 0
BLAST of Cucsat.G8178 vs. NCBI nr
Match: XP_022142585.1 (UDP-arabinose 4-epimerase 1-like [Momordica charantia] >XP_022142586.1 UDP-arabinose 4-epimerase 1-like [Momordica charantia]) HSP 1 Score: 471 bits (1212), Expect = 2.34e-164 Identity = 234/246 (95.12%), Postives = 243/246 (98.78%), Query Frame = 0
BLAST of Cucsat.G8178 vs. NCBI nr
Match: XP_022926994.1 (UDP-arabinose 4-epimerase 1-like [Cucurbita moschata]) HSP 1 Score: 468 bits (1204), Expect = 3.86e-163 Identity = 236/246 (95.93%), Postives = 240/246 (97.56%), Query Frame = 0
BLAST of Cucsat.G8178 vs. ExPASy TrEMBL
Match: A0A0A0LYQ1 (NAD(P)-bd_dom domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G554540 PE=4 SV=1) HSP 1 Score: 488 bits (1257), Expect = 1.62e-171 Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 0
BLAST of Cucsat.G8178 vs. ExPASy TrEMBL
Match: A0A1S3CA02 (UDP-arabinose 4-epimerase 1-like OS=Cucumis melo OX=3656 GN=LOC103498322 PE=4 SV=1) HSP 1 Score: 483 bits (1244), Expect = 1.54e-169 Identity = 241/246 (97.97%), Postives = 245/246 (99.59%), Query Frame = 0
BLAST of Cucsat.G8178 vs. ExPASy TrEMBL
Match: A0A6J1CLC4 (UDP-arabinose 4-epimerase 1-like OS=Momordica charantia OX=3673 GN=LOC111012665 PE=4 SV=1) HSP 1 Score: 471 bits (1212), Expect = 1.13e-164 Identity = 234/246 (95.12%), Postives = 243/246 (98.78%), Query Frame = 0
BLAST of Cucsat.G8178 vs. ExPASy TrEMBL
Match: A0A6J1KKT8 (UDP-arabinose 4-epimerase 1 OS=Cucurbita maxima OX=3661 GN=LOC111495097 PE=4 SV=1) HSP 1 Score: 468 bits (1204), Expect = 1.87e-163 Identity = 236/246 (95.93%), Postives = 240/246 (97.56%), Query Frame = 0
BLAST of Cucsat.G8178 vs. ExPASy TrEMBL
Match: A0A6J1JWX7 (UDP-arabinose 4-epimerase 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111490429 PE=4 SV=1) HSP 1 Score: 468 bits (1204), Expect = 1.87e-163 Identity = 236/246 (95.93%), Postives = 240/246 (97.56%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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