Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGAAAAGAAAAAAGGAGGATAGTTATAGTATTGTGTTGGATGATGTTTGGAATTGGATTCTAATGCGTAGGGCTCTTTCACATTCTTCATTTCCAACTTTGCAAATCCCAAAATGTCTGAATTGCCGGATGAGCTATGGAACCAAATTCTCCAAATTGGTGTCAAGACCTATGCTTTGACTTACAAAGATCTTTGTTGCGTCTCCATCTCTTCTCCTCGACTTCGCCGCCTCTCCGACCATGACTCTCTCTGGTCTCATCTTCTCTTCTCCGATTACCCTTCATCCTCTTCTTCTTTTCCATCTTCCGCTTCCTCCTCAAAGTCCCTTTACAAAATCAGGTACAAGAAAGGATTCATGAACCTGAACCATATCTCTTAATTTCTCTCTTCCAATCTCTCTCAATTCATTATTCTTTTCTTTTGTTCATCTTCTGTTTCGGTTAGGTTGGAGAGAGATAGATATAGGAAGAAAGCGGCGCATACGAGAGCTGTTCTTAGAAAGGAAAGTCAAATAGCTGAGCATTATAGGAGGGTTAGTCAATTAGAGGAACGGTTGATCGAGGAGACCGGCAAATGGACAACGACCTTCACTGAATTCTCTAATCTACGCACAGTCAGGTAGGGTTCGGCAATTGATTCAAAATCCTTCAGTAATATTTTCTGTTTCTTTTCTCGCTTGGTGTTTTAGTGATATGTCATGTGTGCTTGTGCAACTTGGTTGCTTGCAATCTGTAAAGTTTTTTTATTGGAATTGTGTTTTCGTTGAGTTTTTAAAAGGGGGAGACTACAATAGCTGATTATTGTCATTGTATGTAAATTCAATAGAATCCTCTTACTTAAATCTTGAGTTCAACAACATCTGGGGTCGAGGCGCATGAATCTCTAACCTTTTGGATCGAGGGATATGCCTAAGCCAGTTTGAACTATGCTTAGGTTGGCAAGATCATTTTACTAGGTCGGGTGGTAATTCAGTTATTTGTTGATAACAAAGCCCAATGGATTCATTTGGAACCTTTCTACCTCTTCACGTGAATGCTAATATGTTGATTTCGGTTTGAAGTCAGAATTTTTAGATATGATAATTGTGTTTTATCGTTTCAGGGAAGCAACGGTAGCTTTGAATGTCTGGCAGCCTGAGGTCATTAGGGCAAGGCAGAAGCAAATTGTTGAACAATGCAGTGTATCTGTTGATTCTCGTTTGCGGACTCTTGATATGGAGCTCAAGCTTTGTAAGCAACAAATTGCTATTTTTCAAAAAGCACTTGTAAGTTTTGAATGTGGAAACATTATTTTTCTATCTGTTAAGAACTATAATTTTAATTTCTTATACTGCTTGCCACAGAAAGATGAAAAAAAGAGATTGGAATTAGCCAAAGAAGAGTTAACTTCATTGAAGTATCACCCTCTTAAGGATCATAAATCTATGAATAGCAGTAATAATGACACTCACATCAAGAGGAGGTCCAAGGATGCAATAAATGTAAGGTTCTTGCTTGTTGATTATGCTTCAATTTTTTTTTATTGTGAATTTTGATAATTTCTTCGTGTTGCTGATGGTTTGGTTGCTATGAAATCTAACTTTCCCGTGAATTAATGAATTCTAATGTGTGCATGTGCACTGTGCTCTATTAGCATTTTTCTTCTTCAAACCATCAATATTGTTTTCTCATGATGTTACCACTTCTCCCAGTTTTACTAAATAAACTCATTAGGATACTACATATTTCTTATGAAGGTATTTTCCTAGTCTGGCCATGGATTGATGCTCGCTGTTCGTTGGTAGATTATCTGATGTCTTGAACTTAATGTCTTTTTTTAACTTTGACCTCCATAAATAACATTCACATAGAGGGTGGGGGTGGGTTGAAGGGAGGGGAGGTTTTCTTATTGTGAATGATTTGTAATTAGGTTGGAATCTTGGATTGATCTATATTTTATATTATATACTTGATTGATTAAGTTGTAGACACATATATACTTTACCTTTTTTTCCCACAAATAAATTGGAAGAGAAAATTAGCTTACTTTTTTATTACTTCACTGTGGAAATTGTGGCTTACCTCTTTTTTCATTAGATACATAATAATAACCAAATGTTGGCACATCAACTGGCTTGTTTTCCTGTGGTTATTTTATTTTCTGGTTAAAATTTCTTCAACCTTCATGACCACAGTATTGTTTATTCCTCAACTTTCACCAGCCCTACTTAGATAATATATTCTCCTTTCTTGCCTATATTGGTACAAATGGTACCCACCCCTTATATGTACTGAATATGTTGCATGTTTGCTTAAAATCCAAGTGAGAACTCAAACTGATATGATAAATATACTGATTACCAAATTTTGTAGAGCAAGGTAAAACAGCTACGCAGTACATGATTGGGGGAGCATTGCCTGTTGAAGAATGAGCCTGTCCTCAACATATAGGCAGTGGAACTAATAAAAACAGTTATGAATTCCGGTTGAGATGAACGTAACCACCAAAGTGTTCTGCACTAGGTGCAAAGTAATGATAAGATCGAACTGTTATATCAAACATCATATGGAGTTTTACATTTTATTCAAATGGGGAATTTTATAAATCAGTTGGAAGATCATCAATAAGCGCTTCTTTGACCCAAGAAAATATATGTCAACTCCCAATTTGGCCTACAGATAAAGAAACTCATGGCAAATTAAATCCAAGTCAGGACAACAACACTAATTAACTGTTGCAGTTCCCACGTTCATCAAGGTACTCCCCTTCACTCTTCATTTCTCTCCTTTCCCTCTCTTTGGCAGATTATCTCGTCTATTGTGTTCAAATTGGTCATTTTCTCTTCACCATTGCAAGTTTTTTCCTTCCAGATCTGTTTGTATGTGTGTGTGTTTTCCAGATTCATAGCTCTAAATGCTCTACACTTTTTAGATCCGAGACCCTAACCTCCTCAGCTGCCTCAAGGAAAACTAAAAAAAAATCACTCTTCTCGCAAGAAAGAGCTTAGTTATGTCTAATGATCAAATGATCAAGAGGTTCGTGGTTCATATCTCCCACCCACACTTGTACTCAAATCAGCCTCTTGATGCTATCTTTCTTATTCCCTCATCTACTGAAGCTTCCTTGCCGTTGGTTCTTGTGTTTTTTGTATTTGAGTTAAAATAACAAAGGAATAGCTTGGTAGGGGACAGCTAGTGCTTGAATCTTGGTGGGCGGGAGGCAACTGCTTAAGCTTTGTTCTATCCTTTCAATATTAGTCGATGATAGGACATACATGTTCAATCTGTATTTTTGCTGCATGAATTTCTTCATTCCTTCCTTGAGAAAATTTTCTCTGATATGTTTCTGTCTTTGTTTTCACTCCTTTTTTATTCTATTTTTGTCTTCGTTTGTTTGATTGGATCTGTTTTTTTCCCGATTTAGTTTCATAAGTTTCATTTGTATGAAAGAAAATCAGTTATGGGTTGCATGAATGTTTCATGTTGGAATATCACTATGAACTGGGGATGTATTTGGTGCATGTGCGAGAGTAGGCCAAGATTACAAATTCATATAAAATTATATTAAACTATAATTGATACTAGTATATCTGTTTGAACATGTGTGATCGCAAATAGACTAGGAAAGAATTCCTTCCTTCATTAGGATGAGTTGTCATTCGTGTTTGGAAAGAGGATTGGTCTAGAGACTCCACGGGATATGGCATCGAATGACAATGAGCACTTGGGGCAGATGCGCATGTGGAAGGATCTCAAGAACATTATATTTCAGTTCCCTCTGATGTTTGGCGCAACAGCCACTGTATACAAAGACTGTTGTAGGTCTGACTCCAATAGGGACTAAAATTGGTGAGGTAGTAAGAAGAAATGAACAACATATCACTCAAGATATGTTAAACGTGGTATGGATGATTACAATAAACATGCAAACAAGGCAACAGCTTGAGAGGATTGCATCTTGGTTTAAATCAAAGCATGCTATGGTGGAGTCCAGACAACGAAAGGAAGTGGTGGAGAGAGATTCCCTCAATTGTTAGAGTTGTTCCAACGGGTTAAGGTCAAACTAATGGATATCATATTCACGAATGTAGATGGAGCAAAAAAATTCCTTGCCTATTCCAATCAAGCTGAAAAGTACTTGTTGAATGCACTCTTGGGTAAAGGTGAATAAATAGCCTGTCTTGCAACAAAATCAATTTGCTTGGTTTGGAAAAGAACAATTTTTTTAAATCAACTCAATTTGATCCTTTTTTTTTTCATATTAAAACTGTGTTTACTTGTTTTTTTTTCTTTTAAGTTTGAACCACAGACTTGTTGATTCTTAGCGTACACTAGTGTCAGTATTATTATTGCACGTTCTTTTATCTATATTTTCTTACCGATTAACATAGATGTGAAGTTATTGTGTTGTGTATTTACTGCGAATTCTATGTACTACGCCTATTTCCTTG
Coding sequence (CDS)
ATGTCTGAATTGCCGGATGAGCTATGGAACCAAATTCTCCAAATTGGTGTCAAGACCTATGCTTTGACTTACAAAGATCTTTGTTGCGTCTCCATCTCTTCTCCTCGACTTCGCCGCCTCTCCGACCATGACTCTCTCTGGTCTCATCTTCTCTTCTCCGATTACCCTTCATCCTCTTCTTCTTTTCCATCTTCCGCTTCCTCCTCAAAGTCCCTTTACAAAATCAGGTTGGAGAGAGATAGATATAGGAAGAAAGCGGCGCATACGAGAGCTGTTCTTAGAAAGGAAAGTCAAATAGCTGAGCATTATAGGAGGGTTAGTCAATTAGAGGAACGGTTGATCGAGGAGACCGGCAAATGGACAACGACCTTCACTGAATTCTCTAATCTACGCACAGTCAGGGAAGCAACGGTAGCTTTGAATGTCTGGCAGCCTGAGGTCATTAGGGCAAGGCAGAAGCAAATTGTTGAACAATGCAGTGTATCTGTTGATTCTCGTTTGCGGACTCTTGATATGGAGCTCAAGCTTTGTAAGCAACAAATTGCTATTTTTCAAAAAGCACTTAAAGATGAAAAAAAGAGATTGGAATTAGCCAAAGAAGAGTTAACTTCATTGAAGTATCACCCTCTTAAGGATCATAAATCTATGAATAGCAGTAATAATGACACTCACATCAAGAGGAGGTCCAAGGATGCAATAAATAGCAAGGTAAAACAGCTACGCAGTACATGA
Protein sequence
MSELPDELWNQILQIGVKTYALTYKDLCCVSISSPRLRRLSDHDSLWSHLLFSDYPSSSSSFPSSASSSKSLYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRVSQLEERLIEETGKWTTTFTEFSNLRTVREATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELKLCKQQIAIFQKALKDEKKRLELAKEELTSLKYHPLKDHKSMNSSNNDTHIKRRSKDAINSKVKQLRST
Homology
BLAST of Cucsat.G7801.T2 vs. ExPASy Swiss-Prot
Match:
Q9CAZ0 (F-box protein SKIP24 OS=Arabidopsis thaliana OX=3702 GN=SKIP24 PE=1 SV=2)
HSP 1 Score: 219.2 bits (557), Expect = 5.2e-56
Identity = 124/235 (52.77%), Postives = 174/235 (74.04%), Query Frame = 0
Query: 2 SELPDELWNQILQIGVKTYALTYKDLCCVSISSPRLRRLSDHDSLWSHLLFSDYPSS-SS 61
+E+PDELW +IL+IGVK+ +YKDLCC+SISS RL RLS DSLW LL D+P+ S
Sbjct: 4 NEIPDELWRKILEIGVKSSTFSYKDLCCISISSRRLFRLSCDDSLWDLLLVHDFPNHIVS 63
Query: 62 SFPSSASSSKSLYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRVSQLEERLIEETGKW 121
+ SS S +K +Y R ER++ RK AAH RA+LRKES+I+E RR+ +LE RL +E +
Sbjct: 64 ASSSSESPTKFIYMTRFEREKERKLAAHRRALLRKESEISEWGRRIRELEARLSDEAERL 123
Query: 122 TTTFTEFSNLRTVREATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELKLCKQQ 181
++ +FS+L VR+A+VALNVWQPEV+R RQKQ+VEQ +V V+ RLR L+ME+KLCKQQ
Sbjct: 124 QSSSLQFSDLLKVRQASVALNVWQPEVVRGRQKQMVEQNAVPVEGRLRALEMEMKLCKQQ 183
Query: 182 IAIFQKALKDEKKRLELAKEELTSLKYHPLKDHKSMNSSNNDTHIK-RRSKDAIN 235
I +AL++ K R ++A +EL S+KYHPL+D+KS+ + + ++ K ++ K +IN
Sbjct: 184 IMGLNRALREVKHRYDIAIKELESMKYHPLRDYKSIRNGDQGSNGKTKKLKTSIN 238
BLAST of Cucsat.G7801.T2 vs. NCBI nr
Match:
XP_004144305.1 (F-box protein SKIP24 isoform X1 [Cucumis sativus])
HSP 1 Score: 451 bits (1160), Expect = 2.62e-159
Identity = 241/243 (99.18%), Postives = 242/243 (99.59%), Query Frame = 0
Query: 1 MSELPDELWNQILQIGVKTYALTYKDLCCVSISSPRLRRLSDHDSLWSHLLFSDYPSSSS 60
MSELPDELWNQILQIGVKTYALTYKDLCCVSISSPRLRRLSDHDSLWSHLLFSDYPSSSS
Sbjct: 1 MSELPDELWNQILQIGVKTYALTYKDLCCVSISSPRLRRLSDHDSLWSHLLFSDYPSSSS 60
Query: 61 SFPSSASSSKSLYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRVSQLEERLIEETGKW 120
SFPSSASSSKSLYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRVSQLEERLIEETGKW
Sbjct: 61 SFPSSASSSKSLYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRVSQLEERLIEETGKW 120
Query: 121 TTTFTEFSNLRTVREATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELKLCKQQ 180
TT+FTEFSNLRTVREATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELKLCKQQ
Sbjct: 121 TTSFTEFSNLRTVREATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELKLCKQQ 180
Query: 181 IAIFQKALKDEKKRLELAKEELTSLKYHPLKDHKSMNSSNNDTHIKRRSKDAINSKVKQL 240
IAIFQKALKDEKKRLELAKEELTSLKYHPLKDHK MNSSNNDTHIKRRSKDAINSKVKQL
Sbjct: 181 IAIFQKALKDEKKRLELAKEELTSLKYHPLKDHKYMNSSNNDTHIKRRSKDAINSKVKQL 240
Query: 241 RST 243
RST
Sbjct: 241 RST 243
BLAST of Cucsat.G7801.T2 vs. NCBI nr
Match:
XP_031740308.1 (F-box protein SKIP24 isoform X2 [Cucumis sativus])
HSP 1 Score: 436 bits (1121), Expect = 1.86e-153
Identity = 232/234 (99.15%), Postives = 233/234 (99.57%), Query Frame = 0
Query: 1 MSELPDELWNQILQIGVKTYALTYKDLCCVSISSPRLRRLSDHDSLWSHLLFSDYPSSSS 60
MSELPDELWNQILQIGVKTYALTYKDLCCVSISSPRLRRLSDHDSLWSHLLFSDYPSSSS
Sbjct: 1 MSELPDELWNQILQIGVKTYALTYKDLCCVSISSPRLRRLSDHDSLWSHLLFSDYPSSSS 60
Query: 61 SFPSSASSSKSLYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRVSQLEERLIEETGKW 120
SFPSSASSSKSLYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRVSQLEERLIEETGKW
Sbjct: 61 SFPSSASSSKSLYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRVSQLEERLIEETGKW 120
Query: 121 TTTFTEFSNLRTVREATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELKLCKQQ 180
TT+FTEFSNLRTVREATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELKLCKQQ
Sbjct: 121 TTSFTEFSNLRTVREATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELKLCKQQ 180
Query: 181 IAIFQKALKDEKKRLELAKEELTSLKYHPLKDHKSMNSSNNDTHIKRRSKDAIN 234
IAIFQKALKDEKKRLELAKEELTSLKYHPLKDHK MNSSNNDTHIKRRSKDAIN
Sbjct: 181 IAIFQKALKDEKKRLELAKEELTSLKYHPLKDHKYMNSSNNDTHIKRRSKDAIN 234
BLAST of Cucsat.G7801.T2 vs. NCBI nr
Match:
XP_016901824.1 (PREDICTED: F-box protein SKIP24 isoform X2 [Cucumis melo])
HSP 1 Score: 431 bits (1109), Expect = 1.55e-151
Identity = 234/243 (96.30%), Postives = 236/243 (97.12%), Query Frame = 0
Query: 1 MSELPDELWNQILQIGVKTYALTYKDLCCVSISSPRLRRLSDHDSLWSHLLFSDYPSSSS 60
MSELPDELW+QILQIGVKT ALTYKDLCCVSISSPRLRRLSDHDSLWSHLL SDYPSSSS
Sbjct: 1 MSELPDELWSQILQIGVKTSALTYKDLCCVSISSPRLRRLSDHDSLWSHLLSSDYPSSSS 60
Query: 61 SFPSSASSSKSLYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRVSQLEERLIEETGKW 120
SFPSSASSSKSLYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRV QLEERLIEET K
Sbjct: 61 SFPSSASSSKSLYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRVGQLEERLIEETSKC 120
Query: 121 TTTFTEFSNLRTVREATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELKLCKQQ 180
TTT TE SNLRTVREATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELKLCKQQ
Sbjct: 121 TTTLTELSNLRTVREATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELKLCKQQ 180
Query: 181 IAIFQKALKDEKKRLELAKEELTSLKYHPLKDHKSMNSSNNDTHIKRRSKDAINSKVKQL 240
IAIFQKALKDEKKRLELAKEELTSLKYHPLKDHKSMNSSNND+HIKRRSKDAINSKVKQL
Sbjct: 181 IAIFQKALKDEKKRLELAKEELTSLKYHPLKDHKSMNSSNNDSHIKRRSKDAINSKVKQL 240
Query: 241 RST 243
RST
Sbjct: 241 RST 243
BLAST of Cucsat.G7801.T2 vs. NCBI nr
Match:
XP_016901822.1 (PREDICTED: F-box protein SKIP24 isoform X1 [Cucumis melo] >XP_016901823.1 PREDICTED: F-box protein SKIP24 isoform X1 [Cucumis melo])
HSP 1 Score: 425 bits (1093), Expect = 5.10e-149
Identity = 234/248 (94.35%), Postives = 236/248 (95.16%), Query Frame = 0
Query: 1 MSELPDELWNQILQIGVKTYALTYKDLCCVSISSPRLRRLSDHDSLWSHLLFSDYPSSSS 60
MSELPDELW+QILQIGVKT ALTYKDLCCVSISSPRLRRLSDHDSLWSHLL SDYPSSSS
Sbjct: 1 MSELPDELWSQILQIGVKTSALTYKDLCCVSISSPRLRRLSDHDSLWSHLLSSDYPSSSS 60
Query: 61 SFPSSASSSKSLYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRVSQLEERLIEETGKW 120
SFPSSASSSKSLYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRV QLEERLIEET K
Sbjct: 61 SFPSSASSSKSLYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRVGQLEERLIEETSKC 120
Query: 121 TTTFTEFSNLRTVR-----EATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELK 180
TTT TE SNLRTVR EATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELK
Sbjct: 121 TTTLTELSNLRTVRFGRLREATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELK 180
Query: 181 LCKQQIAIFQKALKDEKKRLELAKEELTSLKYHPLKDHKSMNSSNNDTHIKRRSKDAINS 240
LCKQQIAIFQKALKDEKKRLELAKEELTSLKYHPLKDHKSMNSSNND+HIKRRSKDAINS
Sbjct: 181 LCKQQIAIFQKALKDEKKRLELAKEELTSLKYHPLKDHKSMNSSNNDSHIKRRSKDAINS 240
Query: 241 KVKQLRST 243
KVKQLRST
Sbjct: 241 KVKQLRST 248
BLAST of Cucsat.G7801.T2 vs. NCBI nr
Match:
TYK09707.1 (F-box protein SKIP24 isoform X2 [Cucumis melo var. makuwa])
HSP 1 Score: 416 bits (1070), Expect = 8.55e-144
Identity = 225/234 (96.15%), Postives = 227/234 (97.01%), Query Frame = 0
Query: 1 MSELPDELWNQILQIGVKTYALTYKDLCCVSISSPRLRRLSDHDSLWSHLLFSDYPSSSS 60
MSELPDELW+QILQIGVKT ALTYKDLCCVSISSPRLRRLSDHDSLWSHLL SDYPSSSS
Sbjct: 1 MSELPDELWSQILQIGVKTSALTYKDLCCVSISSPRLRRLSDHDSLWSHLLSSDYPSSSS 60
Query: 61 SFPSSASSSKSLYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRVSQLEERLIEETGKW 120
SFPSSASSSKSLYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRV QLEERLIEET K
Sbjct: 61 SFPSSASSSKSLYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRVGQLEERLIEETSKC 120
Query: 121 TTTFTEFSNLRTVREATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELKLCKQQ 180
TTT TE SNLRTVREATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELKLCKQQ
Sbjct: 121 TTTLTELSNLRTVREATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELKLCKQQ 180
Query: 181 IAIFQKALKDEKKRLELAKEELTSLKYHPLKDHKSMNSSNNDTHIKRRSKDAIN 234
IAIFQKALKDEKKRLELAKEELTSLKYHPLKDHKSMNSSNND+HIKRRSKDAIN
Sbjct: 181 IAIFQKALKDEKKRLELAKEELTSLKYHPLKDHKSMNSSNNDSHIKRRSKDAIN 234
BLAST of Cucsat.G7801.T2 vs. ExPASy TrEMBL
Match:
A0A0A0L0S2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G416990 PE=4 SV=1)
HSP 1 Score: 451 bits (1160), Expect = 1.27e-159
Identity = 241/243 (99.18%), Postives = 242/243 (99.59%), Query Frame = 0
Query: 1 MSELPDELWNQILQIGVKTYALTYKDLCCVSISSPRLRRLSDHDSLWSHLLFSDYPSSSS 60
MSELPDELWNQILQIGVKTYALTYKDLCCVSISSPRLRRLSDHDSLWSHLLFSDYPSSSS
Sbjct: 1 MSELPDELWNQILQIGVKTYALTYKDLCCVSISSPRLRRLSDHDSLWSHLLFSDYPSSSS 60
Query: 61 SFPSSASSSKSLYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRVSQLEERLIEETGKW 120
SFPSSASSSKSLYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRVSQLEERLIEETGKW
Sbjct: 61 SFPSSASSSKSLYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRVSQLEERLIEETGKW 120
Query: 121 TTTFTEFSNLRTVREATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELKLCKQQ 180
TT+FTEFSNLRTVREATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELKLCKQQ
Sbjct: 121 TTSFTEFSNLRTVREATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELKLCKQQ 180
Query: 181 IAIFQKALKDEKKRLELAKEELTSLKYHPLKDHKSMNSSNNDTHIKRRSKDAINSKVKQL 240
IAIFQKALKDEKKRLELAKEELTSLKYHPLKDHK MNSSNNDTHIKRRSKDAINSKVKQL
Sbjct: 181 IAIFQKALKDEKKRLELAKEELTSLKYHPLKDHKYMNSSNNDTHIKRRSKDAINSKVKQL 240
Query: 241 RST 243
RST
Sbjct: 241 RST 243
BLAST of Cucsat.G7801.T2 vs. ExPASy TrEMBL
Match:
A0A1S4E0S8 (F-box protein SKIP24 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495869 PE=4 SV=1)
HSP 1 Score: 431 bits (1109), Expect = 7.52e-152
Identity = 234/243 (96.30%), Postives = 236/243 (97.12%), Query Frame = 0
Query: 1 MSELPDELWNQILQIGVKTYALTYKDLCCVSISSPRLRRLSDHDSLWSHLLFSDYPSSSS 60
MSELPDELW+QILQIGVKT ALTYKDLCCVSISSPRLRRLSDHDSLWSHLL SDYPSSSS
Sbjct: 1 MSELPDELWSQILQIGVKTSALTYKDLCCVSISSPRLRRLSDHDSLWSHLLSSDYPSSSS 60
Query: 61 SFPSSASSSKSLYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRVSQLEERLIEETGKW 120
SFPSSASSSKSLYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRV QLEERLIEET K
Sbjct: 61 SFPSSASSSKSLYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRVGQLEERLIEETSKC 120
Query: 121 TTTFTEFSNLRTVREATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELKLCKQQ 180
TTT TE SNLRTVREATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELKLCKQQ
Sbjct: 121 TTTLTELSNLRTVREATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELKLCKQQ 180
Query: 181 IAIFQKALKDEKKRLELAKEELTSLKYHPLKDHKSMNSSNNDTHIKRRSKDAINSKVKQL 240
IAIFQKALKDEKKRLELAKEELTSLKYHPLKDHKSMNSSNND+HIKRRSKDAINSKVKQL
Sbjct: 181 IAIFQKALKDEKKRLELAKEELTSLKYHPLKDHKSMNSSNNDSHIKRRSKDAINSKVKQL 240
Query: 241 RST 243
RST
Sbjct: 241 RST 243
BLAST of Cucsat.G7801.T2 vs. ExPASy TrEMBL
Match:
A0A1S4E0Q4 (F-box protein SKIP24 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495869 PE=4 SV=1)
HSP 1 Score: 425 bits (1093), Expect = 2.47e-149
Identity = 234/248 (94.35%), Postives = 236/248 (95.16%), Query Frame = 0
Query: 1 MSELPDELWNQILQIGVKTYALTYKDLCCVSISSPRLRRLSDHDSLWSHLLFSDYPSSSS 60
MSELPDELW+QILQIGVKT ALTYKDLCCVSISSPRLRRLSDHDSLWSHLL SDYPSSSS
Sbjct: 1 MSELPDELWSQILQIGVKTSALTYKDLCCVSISSPRLRRLSDHDSLWSHLLSSDYPSSSS 60
Query: 61 SFPSSASSSKSLYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRVSQLEERLIEETGKW 120
SFPSSASSSKSLYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRV QLEERLIEET K
Sbjct: 61 SFPSSASSSKSLYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRVGQLEERLIEETSKC 120
Query: 121 TTTFTEFSNLRTVR-----EATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELK 180
TTT TE SNLRTVR EATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELK
Sbjct: 121 TTTLTELSNLRTVRFGRLREATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELK 180
Query: 181 LCKQQIAIFQKALKDEKKRLELAKEELTSLKYHPLKDHKSMNSSNNDTHIKRRSKDAINS 240
LCKQQIAIFQKALKDEKKRLELAKEELTSLKYHPLKDHKSMNSSNND+HIKRRSKDAINS
Sbjct: 181 LCKQQIAIFQKALKDEKKRLELAKEELTSLKYHPLKDHKSMNSSNNDSHIKRRSKDAINS 240
Query: 241 KVKQLRST 243
KVKQLRST
Sbjct: 241 KVKQLRST 248
BLAST of Cucsat.G7801.T2 vs. ExPASy TrEMBL
Match:
A0A5D3CCI3 (F-box protein SKIP24 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold447G001230 PE=4 SV=1)
HSP 1 Score: 416 bits (1070), Expect = 4.14e-144
Identity = 225/234 (96.15%), Postives = 227/234 (97.01%), Query Frame = 0
Query: 1 MSELPDELWNQILQIGVKTYALTYKDLCCVSISSPRLRRLSDHDSLWSHLLFSDYPSSSS 60
MSELPDELW+QILQIGVKT ALTYKDLCCVSISSPRLRRLSDHDSLWSHLL SDYPSSSS
Sbjct: 1 MSELPDELWSQILQIGVKTSALTYKDLCCVSISSPRLRRLSDHDSLWSHLLSSDYPSSSS 60
Query: 61 SFPSSASSSKSLYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRVSQLEERLIEETGKW 120
SFPSSASSSKSLYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRV QLEERLIEET K
Sbjct: 61 SFPSSASSSKSLYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRVGQLEERLIEETSKC 120
Query: 121 TTTFTEFSNLRTVREATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELKLCKQQ 180
TTT TE SNLRTVREATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELKLCKQQ
Sbjct: 121 TTTLTELSNLRTVREATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELKLCKQQ 180
Query: 181 IAIFQKALKDEKKRLELAKEELTSLKYHPLKDHKSMNSSNNDTHIKRRSKDAIN 234
IAIFQKALKDEKKRLELAKEELTSLKYHPLKDHKSMNSSNND+HIKRRSKDAIN
Sbjct: 181 IAIFQKALKDEKKRLELAKEELTSLKYHPLKDHKSMNSSNNDSHIKRRSKDAIN 234
BLAST of Cucsat.G7801.T2 vs. ExPASy TrEMBL
Match:
A0A1S3C1S8 (F-box protein SKIP24 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103495869 PE=4 SV=1)
HSP 1 Score: 411 bits (1056), Expect = 8.65e-144
Identity = 226/242 (93.39%), Postives = 228/242 (94.21%), Query Frame = 0
Query: 1 MSELPDELWNQILQIGVKTYALTYKDLCCVSISSPRLRRLSDHDSLWSHLLFSDYPSSSS 60
MSELPDELW+QILQIGVKT ALTYKDLCCVSISSPRLRRLSDHDSLWSHLL SDYPSSSS
Sbjct: 1 MSELPDELWSQILQIGVKTSALTYKDLCCVSISSPRLRRLSDHDSLWSHLLSSDYPSSSS 60
Query: 61 SFPSSASSSKSLYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRVSQLEERLIEETGKW 120
SFPSSASSSKSLYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRV QLEERLIEET K
Sbjct: 61 SFPSSASSSKSLYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRVGQLEERLIEETSKC 120
Query: 121 TTTFTEFSNLRTVR-----EATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELK 180
TTT TE SNLRTVR EATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELK
Sbjct: 121 TTTLTELSNLRTVRFGRLREATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELK 180
Query: 181 LCKQQIAIFQKALKDEKKRLELAKEELTSLKYHPLKDHKSMNSSNNDTHIKRRSKDAINS 237
LCKQQIAIFQKALKDEKKRLELAKEELTSLKYHPLKDHKSMNSSNND+HIKRRSKDAIN
Sbjct: 181 LCKQQIAIFQKALKDEKKRLELAKEELTSLKYHPLKDHKSMNSSNNDSHIKRRSKDAINC 240
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9CAZ0 | 5.2e-56 | 52.77 | F-box protein SKIP24 OS=Arabidopsis thaliana OX=3702 GN=SKIP24 PE=1 SV=2 | [more] |
Match Name | E-value | Identity | Description | |
XP_004144305.1 | 2.62e-159 | 99.18 | F-box protein SKIP24 isoform X1 [Cucumis sativus] | [more] |
XP_031740308.1 | 1.86e-153 | 99.15 | F-box protein SKIP24 isoform X2 [Cucumis sativus] | [more] |
XP_016901824.1 | 1.55e-151 | 96.30 | PREDICTED: F-box protein SKIP24 isoform X2 [Cucumis melo] | [more] |
XP_016901822.1 | 5.10e-149 | 94.35 | PREDICTED: F-box protein SKIP24 isoform X1 [Cucumis melo] >XP_016901823.1 PREDIC... | [more] |
TYK09707.1 | 8.55e-144 | 96.15 | F-box protein SKIP24 isoform X2 [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0L0S2 | 1.27e-159 | 99.18 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G416990 PE=4 SV=1 | [more] |
A0A1S4E0S8 | 7.52e-152 | 96.30 | F-box protein SKIP24 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495869 PE=4 SV=... | [more] |
A0A1S4E0Q4 | 2.47e-149 | 94.35 | F-box protein SKIP24 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495869 PE=4 SV=... | [more] |
A0A5D3CCI3 | 4.14e-144 | 96.15 | F-box protein SKIP24 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... | [more] |
A0A1S3C1S8 | 8.65e-144 | 93.39 | F-box protein SKIP24 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103495869 PE=4 SV=... | [more] |