Cucsat.G7709.T2 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G7709.T2
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Unknown protein
Location	ctg1546: 141411 .. 142606 (+)
RNA-Seq Expression	Cucsat.G7709.T2
Synteny	Cucsat.G7709.T2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTCTTTTTTGTCACCATTTTCATTAAAACACAATTCATTCTCTACAATCTTCTTCGTCTTCCTCTTCTTCTTCAGAGAAAAAGAGATTCAATAATCAAACCCGATGCCATGCAAAGCCGAGAAATGCAGAGCCACACAAACAACTACCAAACACTTCCCAAGAAACAAGAAGTAATCATCACTGTCTACGTTGAATCTCCCAAATTACAAAACAGTAATCCCCATAAAACCCCAATTGTTCCCCACAACAATAACAACAACAGCAATCCAAAGCCTTCTCTTCGCAAAACCCCCAATTCTACGGGCTACGACCGCCGGGCTCAGCTTCTCGCTTACTCTCGCCACCTCAGAAATGTTCATTCCTCTAACACCCAATCTCCCAAACCCAAATCCAAGGCAACATTTCCTTACCCTTTTGTTTATTTGTGAATTGTGATTTGTGAAAGTTTTTCAAAAAAAAAAAAAAAATGAAAATCGTTGTTACTTGCTGACAGAAATGGAAATGGAAGGTCCGATCAGAAGCGCCAACAGTGCGGCGGATGCCATCGAGACGGGCGTTGCAACGGTGGAGATATGAACGAGTTGGGATGATGAGAGAAGAGAGAACAGAGGTTGTGGATCAGCCATGCCGGCCCAAGTGCTTAGGTGGAAGAAGCAACAAGAAAAGCACTTCAAGATCGGGTTCTTCCATATTTGTAAGTTTTTCATTGCATTGAACATGTGATTCAATATGAATTGAGTACCCATTTGATTGTTCTTAATTAAATATTACATATATGCTTTGTTAGTATGGTTATTATTGATTAATGTGTGTTTCTGTTTTCAGAGGAAATTGAAGAGTTTACTGGGAGAGTTATCAAAGGGCTGTAAACGCAGTGGTGAGGATTGAGGATGAAAATGGCTGATGGTGAGATAGTCAGATCCGCCATTTGTGTTCAGTCCCTTGTTTTTCTCCACGCCTTCAATTCTGTTAGAATGTACACTTGCTGTGTGTCGATTGGACCTTGATTGTGAAGGACCAAAATGAAGTGTTTTGTGTATGTGGATGATTTGGGTGGAAGGAAAAAGTGTTTCTTTTACAACTCCTTATGGGGTGGTTGTGTATCTTTTGACTTCTGACGTTTAATACTAAAGAGTGGTTATGTGGGTTTTGTTTTTGCTGCTTGTTTTTTCCACCATCAAACATAACTTCTT

Coding sequence (CDS)

TTCTTTTTTGTCACCATTTTCATTAAAACACAATTCATTCTCTACAATCTTCTTCGTCTTCCTCTTCTTCTTCAGAGAAAAAGAGATTCAATAATCAAACCCGATGCCATGCAAAGCCGAGAAATGCAGAGCCACACAAACAACTACCAAACACTTCCCAAGAAACAAGAAGTAATCATCACTGTCTACGTTGAATCTCCCAAATTACAAAACAGTAATCCCCATAAAACCCCAATTGTTCCCCACAACAATAACAACAACAGCAATCCAAAGCCTTCTCTTCGCAAAACCCCCAATTCTACGGGCTACGACCGCCGGGCTCAGCTTCTCGCTTACTCTCGCCACCTCAGAAATGTTCATTCCTCTAACACCCAATCTCCCAAACCCAAATCCAAGGCAACATTTCCTTACCCTTTTGTTTATTTGTGA

Protein sequence

FFFVTIFIKTQFILYNLLRLPLLLQRKRDSIIKPDAMQSREMQSHTNNYQTLPKKQEVIITVYVESPKLQNSNPHKTPIVPHNNNNNSNPKPSLRKTPNSTGYDRRAQLLAYSRHLRNVHSSNTQSPKPKSKATFPYPFVYL

Homology

[Close]

BLAST of Cucsat.G7709.T2 vs. NCBI nr
Match: XP_008460454.1 (PREDICTED: uncharacterized protein LOC103499268 [Cucumis melo])

HSP 1 Score: 201 bits (510), Expect = 2.00e-62
Identity = 107/124 (86.29%), Postives = 110/124 (88.71%), Query Frame = 0


Query: 9   KTQFILYNLLRLPLLLQRKRDSIIKPDAMQSREMQSHTNNYQTLPKKQEVIITVYVESPK 68
           KTQFILYNLL L LL       IIK DAMQSREMQSHTNNYQTLPKKQEVIITVYVESPK
Sbjct: 16  KTQFILYNLLLLLLL------QIIKSDAMQSREMQSHTNNYQTLPKKQEVIITVYVESPK 75

Query: 69  LQNSNPHKTPIVPHNNNNNSNPKPSLRKTPNSTGYDRRAQLLAYSRHLRNVHSSNTQSPK 128
           LQNSN HKT I+PHNNNN+ NPKPSL KTPNSTGYDRRAQLLAYSRHLRNVHSSNTQSP+
Sbjct: 76  LQNSNSHKTQIIPHNNNNHINPKPSLPKTPNSTGYDRRAQLLAYSRHLRNVHSSNTQSPQ 133

Query: 129 PKSK 132
           PKSK
Sbjct: 136 PKSK 133

[Close]

BLAST of Cucsat.G7709.T2 vs. NCBI nr
Match: XP_004140323.1 (uncharacterized protein LOC101218772 [Cucumis sativus] >KGN50983.1 hypothetical protein Csa_008362 [Cucumis sativus])

HSP 1 Score: 193 bits (491), Expect = 4.47e-60
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0


Query: 37  MQSREMQSHTNNYQTLPKKQEVIITVYVESPKLQNSNPHKTPIVPHNNNNNSNPKPSLRK 96
           MQSREMQSHTNNYQTLPKKQEVIITVYVESPKLQNSNPHKTPIVPHNNNNNSNPKPSLRK
Sbjct: 1   MQSREMQSHTNNYQTLPKKQEVIITVYVESPKLQNSNPHKTPIVPHNNNNNSNPKPSLRK 60

Query: 97  TPNSTGYDRRAQLLAYSRHLRNVHSSNTQSPKPKSK 132
           TPNSTGYDRRAQLLAYSRHLRNVHSSNTQSPKPKSK
Sbjct: 61  TPNSTGYDRRAQLLAYSRHLRNVHSSNTQSPKPKSK 96

[Close]

BLAST of Cucsat.G7709.T2 vs. NCBI nr
Match: XP_038874461.1 (uncharacterized protein LOC120067113 [Benincasa hispida])

HSP 1 Score: 142 bits (358), Expect = 2.46e-39
Identity = 75/103 (72.82%), Postives = 87/103 (84.47%), Query Frame = 0


Query: 30  SIIKPDAMQSREMQSHTNNYQTLPKKQEVIITVYVESPKLQNSNPHKTPIVPHNNNNNSN 89
           S IKPDAM S++MQ+HTNN QT+P+KQ VIITVYVESPKLQ++N HK PI+PHNN NN  
Sbjct: 45  SSIKPDAMPSQKMQTHTNNNQTIPQKQGVIITVYVESPKLQDNNSHKPPIIPHNNINN-- 104

Query: 90  PKPSLRKTPNSTGYDRRAQLLAYSRHLRNVHSSNTQSPKPKSK 132
           P  +L KTPNSTGYDRRAQLLAYSRHLRN +SS +QS K +SK
Sbjct: 105 PNSALPKTPNSTGYDRRAQLLAYSRHLRNQNSSLSQSSKTESK 145

[Close]

BLAST of Cucsat.G7709.T2 vs. NCBI nr
Match: XP_022962296.1 (uncharacterized protein LOC111462789 [Cucurbita moschata])

HSP 1 Score: 84.3 bits (207), Expect = 2.68e-17
Identity = 48/93 (51.61%), Postives = 64/93 (68.82%), Query Frame = 0


Query: 41  EMQSHTNNYQTLPKKQEVIITVYVESPKLQNSNPHKTPI-VPHNNNNNSNPKPSLRKTPN 100
           E Q++ N  + +P K+ VIITVYVESP+ Q++  H+ PI +  N++ N++PK      P 
Sbjct: 2   EDQTNGNEIKAIPPKERVIITVYVESPRKQSNKSHQNPISINKNSHPNAHPK-----APK 61

Query: 101 STGYDRRAQLLAYSRHLRNVHSSNTQSPKPKSK 132
           S GYDRRA+LLAYSR LRNV S+ T  PK KSK
Sbjct: 62  SRGYDRRAELLAYSRELRNVDSATTHLPKTKSK 89

[Close]

BLAST of Cucsat.G7709.T2 vs. NCBI nr
Match: XP_023546181.1 (uncharacterized protein LOC111805357 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 84.0 bits (206), Expect = 3.77e-17
Identity = 48/93 (51.61%), Postives = 63/93 (67.74%), Query Frame = 0


Query: 41  EMQSHTNNYQTLPKKQEVIITVYVESPKLQNSNPHKTPI-VPHNNNNNSNPKPSLRKTPN 100
           E Q++ N  + +P K+ VIITVYVESP+ Q++  H+ PI +  N++ N++PK      P 
Sbjct: 2   EDQTNGNEIKAIPPKERVIITVYVESPRKQSNKSHQNPISINKNSHPNAHPK-----APK 61

Query: 101 STGYDRRAQLLAYSRHLRNVHSSNTQSPKPKSK 132
           S GYDRRA+LLAYSR LRNV S  T  PK KSK
Sbjct: 62  SRGYDRRAELLAYSRELRNVDSGTTHLPKTKSK 89

[Close]

BLAST of Cucsat.G7709.T2 vs. ExPASy TrEMBL
Match: A0A1S3CDS3 (uncharacterized protein LOC103499268 OS=Cucumis melo OX=3656 GN=LOC103499268 PE=4 SV=1)

HSP 1 Score: 201 bits (510), Expect = 9.68e-63
Identity = 107/124 (86.29%), Postives = 110/124 (88.71%), Query Frame = 0


Query: 9   KTQFILYNLLRLPLLLQRKRDSIIKPDAMQSREMQSHTNNYQTLPKKQEVIITVYVESPK 68
           KTQFILYNLL L LL       IIK DAMQSREMQSHTNNYQTLPKKQEVIITVYVESPK
Sbjct: 16  KTQFILYNLLLLLLL------QIIKSDAMQSREMQSHTNNYQTLPKKQEVIITVYVESPK 75

Query: 69  LQNSNPHKTPIVPHNNNNNSNPKPSLRKTPNSTGYDRRAQLLAYSRHLRNVHSSNTQSPK 128
           LQNSN HKT I+PHNNNN+ NPKPSL KTPNSTGYDRRAQLLAYSRHLRNVHSSNTQSP+
Sbjct: 76  LQNSNSHKTQIIPHNNNNHINPKPSLPKTPNSTGYDRRAQLLAYSRHLRNVHSSNTQSPQ 133

Query: 129 PKSK 132
           PKSK
Sbjct: 136 PKSK 133

[Close]

BLAST of Cucsat.G7709.T2 vs. ExPASy TrEMBL
Match: A0A0A0KN34 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G385350 PE=4 SV=1)

HSP 1 Score: 193 bits (491), Expect = 2.16e-60
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0


Query: 37  MQSREMQSHTNNYQTLPKKQEVIITVYVESPKLQNSNPHKTPIVPHNNNNNSNPKPSLRK 96
           MQSREMQSHTNNYQTLPKKQEVIITVYVESPKLQNSNPHKTPIVPHNNNNNSNPKPSLRK
Sbjct: 1   MQSREMQSHTNNYQTLPKKQEVIITVYVESPKLQNSNPHKTPIVPHNNNNNSNPKPSLRK 60

Query: 97  TPNSTGYDRRAQLLAYSRHLRNVHSSNTQSPKPKSK 132
           TPNSTGYDRRAQLLAYSRHLRNVHSSNTQSPKPKSK
Sbjct: 61  TPNSTGYDRRAQLLAYSRHLRNVHSSNTQSPKPKSK 96

[Close]

BLAST of Cucsat.G7709.T2 vs. ExPASy TrEMBL
Match: A0A6J1HCQ4 (uncharacterized protein LOC111462789 OS=Cucurbita moschata OX=3662 GN=LOC111462789 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.30e-17
Identity = 48/93 (51.61%), Postives = 64/93 (68.82%), Query Frame = 0


Query: 41  EMQSHTNNYQTLPKKQEVIITVYVESPKLQNSNPHKTPI-VPHNNNNNSNPKPSLRKTPN 100
           E Q++ N  + +P K+ VIITVYVESP+ Q++  H+ PI +  N++ N++PK      P 
Sbjct: 2   EDQTNGNEIKAIPPKERVIITVYVESPRKQSNKSHQNPISINKNSHPNAHPK-----APK 61

Query: 101 STGYDRRAQLLAYSRHLRNVHSSNTQSPKPKSK 132
           S GYDRRA+LLAYSR LRNV S+ T  PK KSK
Sbjct: 62  SRGYDRRAELLAYSRELRNVDSATTHLPKTKSK 89

[Close]

BLAST of Cucsat.G7709.T2 vs. ExPASy TrEMBL
Match: A0A6J1JSH9 (uncharacterized protein LOC111487148 OS=Cucurbita maxima OX=3661 GN=LOC111487148 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 2.01e-16
Identity = 48/92 (52.17%), Postives = 61/92 (66.30%), Query Frame = 0


Query: 41  EMQSHTNNYQTLPKKQEVIITVYVESPKLQNSNPHKTPIVPHNNNNNSNPKPSLRKTPNS 100
           E Q++ N  + +P K+ VIITVYVESP+ Q++  H+ PI   N N++ N  P   K   S
Sbjct: 2   EDQTNGNEIKAIPPKERVIITVYVESPRKQSNKSHQNPIS-INKNSHPNAPPKATK---S 61

Query: 101 TGYDRRAQLLAYSRHLRNVHSSNTQSPKPKSK 132
            GYDRRA+LLAYSR LRNV S+ T  PK KSK
Sbjct: 62  RGYDRRAELLAYSRELRNVDSATTHLPKTKSK 89

[Close]

BLAST of Cucsat.G7709.T2 vs. ExPASy TrEMBL
Match: A0A540NED7 (Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_005494 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 2.09e-09
Identity = 45/108 (41.67%), Postives = 56/108 (51.85%), Query Frame = 0


Query: 36  AMQSREMQSHTNNYQTLPKKQEVIITVYVESPKLQNSNPHKTPIVPHNNNNNSNPKPSLR 95
           A Q  E +   N  +  P K+EVIITVYVESP   +S+    P+         NPKPS  
Sbjct: 2   AKQELEKEEKNNGTRERPNKKEVIITVYVESPASSDSHQKPGPVK------KINPKPSSE 61

Query: 96  KTPNSTG----YDRRAQLLAYSRHLRNVH-------SSNTQSPKPKSK 132
           K P+ T     YDRRAQLLAYS+ LR          ++N   PKP+ K
Sbjct: 62  K-PHQTAKTRIYDRRAQLLAYSQELRTTGDAQKVQWTNNGSKPKPRRK 102

The following BLAST results are available for this feature:

BLAST of Cucsat.G7709.T2 vs.


Match Name	E-value	Identity	Description

BLAST of Cucsat.G7709.T2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008460454.1	2.00e-62	86.29	PREDICTED: uncharacterized protein LOC103499268 [Cucumis melo]	[more]
XP_004140323.1	4.47e-60	100.00	uncharacterized protein LOC101218772 [Cucumis sativus] >KGN50983.1 hypothetical ...	[more]
XP_038874461.1	2.46e-39	72.82	uncharacterized protein LOC120067113 [Benincasa hispida]	[more]
XP_022962296.1	2.68e-17	51.61	uncharacterized protein LOC111462789 [Cucurbita moschata]	[more]
XP_023546181.1	3.77e-17	51.61	uncharacterized protein LOC111805357 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cucsat.G7709.T2 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CDS3	9.68e-63	86.29	uncharacterized protein LOC103499268 OS=Cucumis melo OX=3656 GN=LOC103499268 PE=...	[more]
A0A0A0KN34	2.16e-60	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G385350 PE=4 SV=1	[more]
A0A6J1HCQ4	1.30e-17	51.61	uncharacterized protein LOC111462789 OS=Cucurbita moschata OX=3662 GN=LOC1114627...	[more]
A0A6J1JSH9	2.01e-16	52.17	uncharacterized protein LOC111487148 OS=Cucurbita maxima OX=3661 GN=LOC111487148...	[more]
A0A540NED7	2.09e-09	41.67	Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_005494 PE=4 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 69..104

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G7709	Cucsat.G7709	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G7709.T2.E1	Cucsat.G7709.T2.E1	exon
Cucsat.G7709.T2.E2	Cucsat.G7709.T2.E2	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G7709.T2.C1	Cucsat.G7709.T2.C1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G7709.T2	Cucsat.G7709.T2-protein	polypeptide