Cucsat.G6645.T14 (mRNA) Cucumber (B10) v3

Overview
NameCucsat.G6645.T14
TypemRNA
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionFarnesyl pyrophosphate synthase
Locationctg1502: 261922 .. 266246 (+)
RNA-Seq ExpressionCucsat.G6645.T14
SyntenyCucsat.G6645.T14
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GGTCTGTCTTGGGGGCAAATATTAGTTTCTCTCAATAATCAAAACTCGAAAGATCGAAACTGCCACCGCCACAAAAAAATAAACGTTATAAACAGAGAAACTGTTGAACATGCGCCATAACTCCCACAATCTCTCTTCATTATTGCCTATTTATTATTAAACTACTTCCACTCTTCACTCACGAACTCTTCTCCCCTTTTCCTCTCTACCCATTTTTCCAATCCCAAAATGAATGAATTCAGGTCCAAATTCTTGGAGGTTTACTCATTGTTGAAATCAGAGCTCCTTCACGACCCTGCTTTCGAGTTCACTGACGATTCTCGCCAATGGGTCGAGCGGGTAACTATCATTTTTCTGTTTGATTGTCCCTATCTTCATTCCCTTTTCATTTCTTGATGTATTTTCCATTATTCCCATGTTTTTCGTGTTCTGGGTTGGGGCTGAGTTGTTAGAATCACTTAGGAATTTGATGTGCTTTGATTCTTCTTCTTATTATGATTATTATTGCTTTTTTGCTTATTGTGTTTTGTTTGTTTGTTTGATTTGTGTGGAGATGTGGCTGATACGAATGAACTATTTAATAATTGATTTCTTAGATTGTTTTGACAGGGAGTTGGAGTAGATTATTGTGTAGTTGATTAAGTGGGGTCATATTTTGTTTCTCCTTGTTATTTGGGAGTTTTGTATTGTGGCATAATTGAGTTGACTAGAGGCCAGGCCTTTTGGTCAATGTTTGCTAGCCCTTGTAGAAGAAAGTCTACAATGCGTTGTTTTTTTATTCTTCTTTCTTAGTTTTTTTTATGACCGGCATATTTCTTTTCATTGTCATTTGGACTGCTACCAGAGATTGCAGATGGCTATGCATAACAATATAGCATGTGTTGAAAAACATCCACGTGCTCATGGAAATGCTTTATAATGTTAAAAAATAAGAACTCTAATATTTATGAAAATTTGACATTAAGAAATTAAAATATGGATATTTGTATCTCTGAGACTTTTCCGTGCGAAGGAAGCTTAGAAATCAAATCACTTAATGAATGTTTGCTGGTAATACTCGTGCATAATGCTAATGGCAGCTTAGATTTACTTTGTGCATGTTGATTTTTGCTTAAATCTACCTTTAAAATAGGGACTTCTAGTTTATCTCACGTATTGAAGAGGCTCTACGATGAGGGATTTCTTTACATGATCTAATTAATGATTTTTGGTATATGTTTAGTTTCGGCGTCGGTGGCCTGAGGGCTTAGTGTTTATGAGAAAGAAGTGTAATACTAATTGTGTTTACAATAAGTTTGCTTTGCCTGGGAAGCTGTGGTTAGACCATGCATGTCTCTGGCCTTTGATTTGTGGAATGATGGACTGTCCATTCATGTGAATATCTTAATTATTCTGTGTTTTGTTTGATATCAATTTCTATTGTCTCTCCTCTGGACTTGTACAGATGCAAATATTTTGTTCATCCTAATGAGTTTGTGTGTTCCTTTTATTGCAGATGCTGGATTACAATGTACCTGGAGGTGTGATCAAAACTCATCTAAATTGCTTTCAAGATTTTCTTGCGTTGCATGCTAAAACTTGAAGGGGAGTTATCATTCAAAAGATTGGATAGTTTTGAATTTTAATATTTTGATTTGAATGTACAATATCTTTTGCAGGAAAGTTGAACAGAGGTCTCTCTGTAATTGATAGCTACAAGTTACTGAAACAAGGGGGAAAGCTAACTGAAGATGAAGTGTTTCTGGCTTCTGCACTTGGTTGGTGCATTGAATGGGTATTGCTATTTGGCACTCTTATTTGTCGTTGATCCTCTCACAGTGAATTGTATAATCATTATATGACAACTGTGCCGACGTTTCTTAATATATCTGCATACCCAATCATCCATTTCACAGCTTCAAGCATATTTTCTTATTCTTGACGACATCATGGACAATGCTGTTACACGACGTGGACAACCTTGCTGGTTCCGGGTACCAAAGGTGTGAACTTTAGTGCAACCGAGTTATTTTCCTAGGATGTTATTGAAAGCTATGCTTAATTCTGTTTCAACCTTAACTTATCCTGTATTTCCTAGTTACAGGTTGGAATGGTTGCCGTAAATGATGGCACAATGCTACGGAACCATATCTCGAGAATCCTCAAGAATCATTTCAAGGAAAAGCCTTATTATGTGGATCTTATGGAATTGTTTAATGAGGTGGTTATCTTTGAGAATACCTTGTGCGGCCTTGTATTTTCTTTCTATCTGATTGAGTATCAACGATCTAGGTAGAGTTTCAAACAGCCTCAGGACAGATGATAGATTTAATTACCACACTTGAAGGAGAGAAAGATCTATCAAAGTACTCATTACCTCTGTAAGTGAAATTTGCTTTCTAAAAGGTTACTCCCCTATTACTCTAAATGCACTCACTGGGAATCTTTTCCTGCAGTCATCATCGCATTGTTCAGTACAAAACTGCATACTACTCGTTTTACCTCCCGGTAAGTACACTGCCTTTTATGTAAATTTTTATCATCAGAAGTAGTGAAGGTAATTGATATATATATATATATATATTGCAGTTATAAGTAAGAAACTTTAACTTTTGGTACCCAAATCAAGTAAAGTGCCTAATTTAGCTTCTAAAACAAACCACAGAACTACTTGCATGTAAACAAAATCAATAGGCTTTGCAGGTATGTGAAGAAACTAATCTCATAGGTTGTACAGATGTCAATGATAATAAAGGAGTTTAAACATGATCCCATGAACTTTAAGAATGACATGGGAGCCATCGTCTTAGATTAGATGTGTCCCTTTTTTCTTTAATTTGTATAATACAACAGTTAACACTAATATTGAACCATATGAATGAAAACAGAAAATATTAAGGATTTTTAGGTTAAGGGGAAAACCATTTTTAGAAGCAAAAAAGAAACCCACATAATAAAACAAAAGTTATGTGGACCTCTAAAATATCTGAAGGCCAAAATAGAAAATAATTAACTTGGCACATAAATTTCATACTTTATGGAAAAGTATGAATACAATTTTATGTGTCATAGGCTATTTTTTTTTCATGATGCACACACCATTCTAATTACACACTTCTAGCTTCTGATTGAACTAATGATTTTGATTTAATGACAAATATTCTTTATCTATCTCCAGTTCTATTGGAACTTCTTGTGTCTTATGGAATGCAGAAATCTACCCTGACACAACTCTTTGATTTGACACTAGGTTGCATGTGCATTGCTAATGGCAGGTGAAAATTTGGAGAATCATAATGATGTCAAGAACATTCTCATTGATATGGGAACCTATTTTCAAGTGCAGGTAGTTTGTTATTTCTTTGAACATTCTTACTTGGAGATTGCTTTAGGAAGTTGGAGTGAAACATTACCTTTTGCTTCAATTTGATCTTCAAAACCATTATGTTAGTCCAACTTTTCTGTAGGATGATTATCTGGATTGTTTTGGTCTTCCTGATGTGATAGGGAAGGTATGTTTTGAAAACTAGTACTTGAATGAGGTCCCATCATTTCTTATCCAGTTTGCTTCTGTTTTTTTGTAGAAGCAGAGACTTGATTGACTTTGAATTGAAATTGCAGATTGGAACAGATATTGAAGATTTCAAGTGCTCTTGGCTTGTTGTGAAAGCGCTAGAACTAAGTGATGAAAAACAGAAGAGTTTGCTACATGTAAGAAACCTGAAGTTCCCTCTATCAAATCTGGTTTTCTCAACTGAAGAAAAATAATGGTAGTTTATGGTCTTGTACAGGAAAATTATGGGAAAGCAGATACGGATTGTGTTGCCAGAGTGAAAGAGTTATATAAAGCTCTCAATCTTGAGGTTCTACTTCCTGCATTGTTATAAGAAGTTATTGAATGCATCTGAAAGTTCAAAGACTAGAATAAGATATTAACGAATGCTAATGTGTTGCCAGATAAATCGTTTGAAACTGTCGGTATGATCTAGTTATTTTTTGGCAGGGCGTATTTTCTGAGTACGAGAGAAAAAGCTACGAGAAGCTTCTAAAATCCATAGAAGTCCATCCAAGTGATGCAGTACAAGCAGTGTTGAAATCTTTCCTTGCAAAGATTTACAAAAGGCAGAAATAGAGAAGTCGAGAAAGATAAACTTTGTGGGGCGATGACTTGTGGATCCAAGGTGTGGTATTTTCTTGTTATACAGATTGGTGGATGTAAGTTGATTATGAATGAAGGGTTGTAATGGAATAGTGAATGAAAAGCTTGTAAGTAGCTGTGTTGTTTTGACTTCTTTATGATATTTAAGGCTTCAGAACTTTCTCAGATGGTTCGAGTACATTTCATA

Coding sequence (CDS)

ATGAATGAATTCAGGTCCAAATTCTTGGAGGTTTACTCATTGTTGAAATCAGAGCTCCTTCACGACCCTGCTTTCGAGTTCACTGACGATTCTCGCCAATGGGTCGAGCGGATGCTGGATTACAATGTACCTGGAGGAAAGTTGAACAGAGGTCTCTCTGTAATTGATAGCTACAAGTTACTGAAACAAGGGGGAAAGCTAACTGAAGATGAAGTGTTTCTGGCTTCTGCACTTGGTTGGTGCATTGAATGGCTTCAAGCATATTTTCTTATTCTTGACGACATCATGGACAATGCTGTTACACGACGTGGACAACCTTGCTGGTTCCGGGTACCAAAGGTTGGAATGGTTGCCGTAAATGATGGCACAATGCTACGGAACCATATCTCGAGAATCCTCAAGAATCATTTCAAGGAAAAGCCTTATTATGTGGATCTTATGGAATTGTTTAATGAGGTGGTTATCTTTGAGAATACCTTGTGCGGCCTTGTATTTTCTTTCTATCTGATTGAGTATCAACGATCTAGGTAG

Protein sequence

MNEFRSKFLEVYSLLKSELLHDPAFEFTDDSRQWVERMLDYNVPGGKLNRGLSVIDSYKLLKQGGKLTEDEVFLASALGWCIEWLQAYFLILDDIMDNAVTRRGQPCWFRVPKVGMVAVNDGTMLRNHISRILKNHFKEKPYYVDLMELFNEVVIFENTLCGLVFSFYLIEYQRSR
Homology
[Close]
BLAST of Cucsat.G6645.T14 vs. ExPASy Swiss-Prot
Match: Q4JHN6 (Farnesyl pyrophosphate synthase OS=Panax ginseng OX=4054 GN=FPS PE=2 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 2.4e-74
Identity = 124/153 (81.05%), Postives = 147/153 (96.08%), Query Frame = 0 

Query: 1   MNEFRSKFLEVYSLLKSELLHDPAFEFTDDSRQWVERMLDYNVPGGKLNRGLSVIDSYKL 60
           M++ +++FLEVYS+LKSELL+DPAFEFTDDSRQWVERMLDYNVPGGKLNRGLSVIDSYKL
Sbjct: 1   MSDLKTRFLEVYSVLKSELLNDPAFEFTDDSRQWVERMLDYNVPGGKLNRGLSVIDSYKL 60

Query: 61  LKQGGKLTEDEVFLASALGWCIEWLQAYFLILDDIMDNAVTRRGQPCWFRVPKVGMVAVN 120
           LK+G +L++DE+FL+SALGWCIEWLQAYFL+LDDIMD++ TRRGQPCWFR+PKVGM+AVN
Sbjct: 61  LKEGKELSDDEIFLSSALGWCIEWLQAYFLVLDDIMDSSHTRRGQPCWFRLPKVGMIAVN 120

Query: 121 DGTMLRNHISRILKNHFKEKPYYVDLMELFNEV 154
           DG +LRNHI RILK HF++KPYYVDL++LFNEV
Sbjct: 121 DGILLRNHIPRILKKHFRQKPYYVDLLDLFNEV 153

[Close]
BLAST of Cucsat.G6645.T14 vs. ExPASy Swiss-Prot
Match: P49351 (Farnesyl pyrophosphate synthase 1 OS=Lupinus albus OX=3870 GN=FPS1 PE=2 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 6.5e-72
Identity = 122/153 (79.74%), Postives = 138/153 (90.20%), Query Frame = 0 

Query: 1   MNEFRSKFLEVYSLLKSELLHDPAFEFTDDSRQWVERMLDYNVPGGKLNRGLSVIDSYKL 60
           M + RS FL VYS+LKSELLHDPAFEF+ DSRQW++RMLDYNVPGGKLNRGLSVIDSY+L
Sbjct: 1   MADLRSTFLNVYSVLKSELLHDPAFEFSPDSRQWLDRMLDYNVPGGKLNRGLSVIDSYRL 60

Query: 61  LKQGGKLTEDEVFLASALGWCIEWLQAYFLILDDIMDNAVTRRGQPCWFRVPKVGMVAVN 120
           LK G +L +DE+FLASALGWCIEWLQAYFL+LDDIMDN+ TRRGQPCWFRVPKVGM+A N
Sbjct: 61  LKDGHELNDDEIFLASALGWCIEWLQAYFLVLDDIMDNSHTRRGQPCWFRVPKVGMIAAN 120

Query: 121 DGTMLRNHISRILKNHFKEKPYYVDLMELFNEV 154
           DG +LRNHI RILK HF+ KPYY DL++LFNEV
Sbjct: 121 DGVLLRNHIPRILKKHFRGKPYYADLLDLFNEV 153

[Close]
BLAST of Cucsat.G6645.T14 vs. ExPASy Swiss-Prot
Match: Q09152 (Farnesyl pyrophosphate synthase 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=FPS1 PE=2 SV=2)

HSP 1 Score: 269.6 bits (688), Expect = 2.5e-71
Identity = 122/160 (76.25%), Postives = 143/160 (89.38%), Query Frame = 0 

Query: 3   EFRSKFLEVYSLLKSELLHDPAFEFTDDSRQWVERMLDYNVPGGKLNRGLSVIDSYKLLK 62
           + +S FL VYS+LKS+LLHDP+FEFT++SR WV+RMLDYNV GGKLNRGLSV+DS+KLLK
Sbjct: 45  DLKSTFLNVYSVLKSDLLHDPSFEFTNESRLWVDRMLDYNVRGGKLNRGLSVVDSFKLLK 104

Query: 63  QGGKLTEDEVFLASALGWCIEWLQAYFLILDDIMDNAVTRRGQPCWFRVPKVGMVAVNDG 122
           QG  LTE EVFL+ ALGWCIEWLQAYFL+LDDIMDN+VTRRGQPCWFRVP+VGMVA+NDG
Sbjct: 105 QGNDLTEQEVFLSCALGWCIEWLQAYFLVLDDIMDNSVTRRGQPCWFRVPQVGMVAINDG 164

Query: 123 TMLRNHISRILKNHFKEKPYYVDLMELFNEVVIFENTLCG 163
            +LRNHI RILK HF++KPYYVDL++LFNEV +   T CG
Sbjct: 165 ILLRNHIHRILKKHFRDKPYYVDLVDLFNEVEL--QTACG 202

[Close]
BLAST of Cucsat.G6645.T14 vs. ExPASy Swiss-Prot
Match: P49352 (Farnesyl pyrophosphate synthase 2 OS=Lupinus albus OX=3870 GN=FPS2 PE=2 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 1.6e-70
Identity = 122/153 (79.74%), Postives = 137/153 (89.54%), Query Frame = 0 

Query: 1   MNEFRSKFLEVYSLLKSELLHDPAFEFTDDSRQWVERMLDYNVPGGKLNRGLSVIDSYKL 60
           M + +S FL VYS+LKSELL DPAFEF+ DSRQWVERMLDYNVPGGKLNRGLSVIDSYKL
Sbjct: 1   MADPKSSFLNVYSILKSELLQDPAFEFSTDSRQWVERMLDYNVPGGKLNRGLSVIDSYKL 60

Query: 61  LKQGGKLTEDEVFLASALGWCIEWLQAYFLILDDIMDNAVTRRGQPCWFRVPKVGMVAVN 120
           LK G +L ++E+FLASALGWCIEWLQAYFL+LDDIMDN+ TRRG PCWFRVPKVGM+A N
Sbjct: 61  LKDGQELNDEEIFLASALGWCIEWLQAYFLVLDDIMDNSHTRRGHPCWFRVPKVGMIAPN 120

Query: 121 DGTMLRNHISRILKNHFKEKPYYVDLMELFNEV 154
           DG +LRNHI RILK HF+ KPYYVDL++LFNEV
Sbjct: 121 DGVVLRNHIPRILKKHFRGKPYYVDLLDLFNEV 153

[Close]
BLAST of Cucsat.G6645.T14 vs. ExPASy Swiss-Prot
Match: Q43315 (Farnesyl pyrophosphate synthase 2 OS=Arabidopsis thaliana OX=3702 GN=FPS2 PE=2 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 2.7e-70
Identity = 122/162 (75.31%), Postives = 140/162 (86.42%), Query Frame = 0 

Query: 1   MNEFRSKFLEVYSLLKSELLHDPAFEFTDDSRQWVERMLDYNVPGGKLNRGLSVIDSYKL 60
           M + +S FL+VYS+LKS+LL DP+FEFT +SRQW+ERMLDYNV GGKLNRGLSV+DSYKL
Sbjct: 1   MADLKSTFLDVYSVLKSDLLQDPSFEFTHESRQWLERMLDYNVRGGKLNRGLSVVDSYKL 60

Query: 61  LKQGGKLTEDEVFLASALGWCIEWLQAYFLILDDIMDNAVTRRGQPCWFRVPKVGMVAVN 120
           LKQG  LTE E FL+ ALGWCIEWLQAYFL+LDDIMDN+VTRRGQPCWFR PKVGM+A+N
Sbjct: 61  LKQGQDLTEKETFLSCALGWCIEWLQAYFLVLDDIMDNSVTRRGQPCWFRKPKVGMIAIN 120

Query: 121 DGTMLRNHISRILKNHFKEKPYYVDLMELFNEVVIFENTLCG 163
           DG +LRNHI RILK HF+E PYYVDL++LFNEV     T CG
Sbjct: 121 DGILLRNHIHRILKKHFREMPYYVDLVDLFNEVEF--QTACG 160

[Close]
BLAST of Cucsat.G6645.T14 vs. NCBI nr
Match: XP_004149409.1 (farnesyl pyrophosphate synthase isoform X2 [Cucumis sativus] >KGN44386.1 hypothetical protein Csa_016157 [Cucumis sativus])

HSP 1 Score: 322 bits (825), Expect = 5.45e-108
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0 

Query: 1   MNEFRSKFLEVYSLLKSELLHDPAFEFTDDSRQWVERMLDYNVPGGKLNRGLSVIDSYKL 60
           MNEFRSKFLEVYSLLKSELLHDPAFEFTDDSRQWVERMLDYNVPGGKLNRGLSVIDSYKL
Sbjct: 1   MNEFRSKFLEVYSLLKSELLHDPAFEFTDDSRQWVERMLDYNVPGGKLNRGLSVIDSYKL 60

Query: 61  LKQGGKLTEDEVFLASALGWCIEWLQAYFLILDDIMDNAVTRRGQPCWFRVPKVGMVAVN 120
           LKQGGKLTEDEVFLASALGWCIEWLQAYFLILDDIMDNAVTRRGQPCWFRVPKVGMVAVN
Sbjct: 61  LKQGGKLTEDEVFLASALGWCIEWLQAYFLILDDIMDNAVTRRGQPCWFRVPKVGMVAVN 120

Query: 121 DGTMLRNHISRILKNHFKEKPYYVDLMELFNEV 153
           DGTMLRNHISRILKNHFKEKPYYVDLMELFNEV
Sbjct: 121 DGTMLRNHISRILKNHFKEKPYYVDLMELFNEV 153

[Close]
BLAST of Cucsat.G6645.T14 vs. NCBI nr
Match: XP_031744290.1 (farnesyl pyrophosphate synthase isoform X1 [Cucumis sativus])

HSP 1 Score: 317 bits (812), Expect = 5.49e-106
Identity = 153/155 (98.71%), Postives = 153/155 (98.71%), Query Frame = 0 

Query: 1   MNEFRSKFLEVYSLLKSELLHDPAFEFTDDSRQWVERMLDYNVPGGKLNRGLSVIDSYKL 60
           MNEFRSKFLEVYSLLKSELLHDPAFEFTDDSRQWVERMLDYNVPGGKLNRGLSVIDSYKL
Sbjct: 1   MNEFRSKFLEVYSLLKSELLHDPAFEFTDDSRQWVERMLDYNVPGGKLNRGLSVIDSYKL 60

Query: 61  LKQGGKLTEDEVFLASALGWCIEWLQAYFLILDDIMDNAVTRRGQPCWFRVPK--VGMVA 120
           LKQGGKLTEDEVFLASALGWCIEWLQAYFLILDDIMDNAVTRRGQPCWFRVPK  VGMVA
Sbjct: 61  LKQGGKLTEDEVFLASALGWCIEWLQAYFLILDDIMDNAVTRRGQPCWFRVPKLQVGMVA 120

Query: 121 VNDGTMLRNHISRILKNHFKEKPYYVDLMELFNEV 153
           VNDGTMLRNHISRILKNHFKEKPYYVDLMELFNEV
Sbjct: 121 VNDGTMLRNHISRILKNHFKEKPYYVDLMELFNEV 155

[Close]
BLAST of Cucsat.G6645.T14 vs. NCBI nr
Match: TYK08016.1 (farnesyl pyrophosphate synthase 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 309 bits (792), Expect = 5.24e-103
Identity = 146/153 (95.42%), Postives = 149/153 (97.39%), Query Frame = 0 

Query: 1   MNEFRSKFLEVYSLLKSELLHDPAFEFTDDSRQWVERMLDYNVPGGKLNRGLSVIDSYKL 60
           M+EFRSKFL+VYSLLKSELLHDPAFEFTDDSRQWVERMLDYNVPGGKLNRGLSVIDSYKL
Sbjct: 1   MSEFRSKFLDVYSLLKSELLHDPAFEFTDDSRQWVERMLDYNVPGGKLNRGLSVIDSYKL 60

Query: 61  LKQGGKLTEDEVFLASALGWCIEWLQAYFLILDDIMDNAVTRRGQPCWFRVPKVGMVAVN 120
           LKQG KLTEDEVFLASALGWCIEW QAYFL+LDDIMD AVTRRGQPCWFRVPKVGMVAVN
Sbjct: 61  LKQGEKLTEDEVFLASALGWCIEWFQAYFLVLDDIMDKAVTRRGQPCWFRVPKVGMVAVN 120

Query: 121 DGTMLRNHISRILKNHFKEKPYYVDLMELFNEV 153
           DG MLRNHISRILKNHFKEKPYYVDLMELFNEV
Sbjct: 121 DGIMLRNHISRILKNHFKEKPYYVDLMELFNEV 153

[Close]
BLAST of Cucsat.G6645.T14 vs. NCBI nr
Match: XP_008463030.1 (PREDICTED: farnesyl pyrophosphate synthase 1-like [Cucumis melo] >KAA0048241.1 farnesyl pyrophosphate synthase 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 309 bits (792), Expect = 5.60e-103
Identity = 146/153 (95.42%), Postives = 149/153 (97.39%), Query Frame = 0 

Query: 1   MNEFRSKFLEVYSLLKSELLHDPAFEFTDDSRQWVERMLDYNVPGGKLNRGLSVIDSYKL 60
           M+EFRSKFL+VYSLLKSELLHDPAFEFTDDSRQWVERMLDYNVPGGKLNRGLSVIDSYKL
Sbjct: 1   MSEFRSKFLDVYSLLKSELLHDPAFEFTDDSRQWVERMLDYNVPGGKLNRGLSVIDSYKL 60

Query: 61  LKQGGKLTEDEVFLASALGWCIEWLQAYFLILDDIMDNAVTRRGQPCWFRVPKVGMVAVN 120
           LKQG KLTEDEVFLASALGWCIEW QAYFL+LDDIMD AVTRRGQPCWFRVPKVGMVAVN
Sbjct: 61  LKQGEKLTEDEVFLASALGWCIEWFQAYFLVLDDIMDKAVTRRGQPCWFRVPKVGMVAVN 120

Query: 121 DGTMLRNHISRILKNHFKEKPYYVDLMELFNEV 153
           DG MLRNHISRILKNHFKEKPYYVDLMELFNEV
Sbjct: 121 DGIMLRNHISRILKNHFKEKPYYVDLMELFNEV 153

[Close]
BLAST of Cucsat.G6645.T14 vs. NCBI nr
Match: XP_038900125.1 (farnesyl pyrophosphate synthase-like isoform X1 [Benincasa hispida])

HSP 1 Score: 307 bits (787), Expect = 3.21e-102
Identity = 145/153 (94.77%), Postives = 150/153 (98.04%), Query Frame = 0 

Query: 1   MNEFRSKFLEVYSLLKSELLHDPAFEFTDDSRQWVERMLDYNVPGGKLNRGLSVIDSYKL 60
           M+EFRSKFLEVYSLLKSELLHDPAFEFTDDSRQWVERMLDYNVPGGKLNRGLSVIDSYKL
Sbjct: 1   MSEFRSKFLEVYSLLKSELLHDPAFEFTDDSRQWVERMLDYNVPGGKLNRGLSVIDSYKL 60

Query: 61  LKQGGKLTEDEVFLASALGWCIEWLQAYFLILDDIMDNAVTRRGQPCWFRVPKVGMVAVN 120
           LKQ  KLTEDEVFLASALGWCIEWLQAYFL+LDDIMDN+VTRRGQPCWFRVPKVGMVAVN
Sbjct: 61  LKQVEKLTEDEVFLASALGWCIEWLQAYFLVLDDIMDNSVTRRGQPCWFRVPKVGMVAVN 120

Query: 121 DGTMLRNHISRILKNHFKEKPYYVDLMELFNEV 153
           DG MLRNHISRILKNHF+EKPYYVDL+ELFNEV
Sbjct: 121 DGIMLRNHISRILKNHFREKPYYVDLLELFNEV 153

[Close]
BLAST of Cucsat.G6645.T14 vs. ExPASy TrEMBL
Match: A0A0A0K997 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G278210 PE=3 SV=1)

HSP 1 Score: 322 bits (825), Expect = 2.64e-108
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0 

Query: 1   MNEFRSKFLEVYSLLKSELLHDPAFEFTDDSRQWVERMLDYNVPGGKLNRGLSVIDSYKL 60
           MNEFRSKFLEVYSLLKSELLHDPAFEFTDDSRQWVERMLDYNVPGGKLNRGLSVIDSYKL
Sbjct: 1   MNEFRSKFLEVYSLLKSELLHDPAFEFTDDSRQWVERMLDYNVPGGKLNRGLSVIDSYKL 60

Query: 61  LKQGGKLTEDEVFLASALGWCIEWLQAYFLILDDIMDNAVTRRGQPCWFRVPKVGMVAVN 120
           LKQGGKLTEDEVFLASALGWCIEWLQAYFLILDDIMDNAVTRRGQPCWFRVPKVGMVAVN
Sbjct: 61  LKQGGKLTEDEVFLASALGWCIEWLQAYFLILDDIMDNAVTRRGQPCWFRVPKVGMVAVN 120

Query: 121 DGTMLRNHISRILKNHFKEKPYYVDLMELFNEV 153
           DGTMLRNHISRILKNHFKEKPYYVDLMELFNEV
Sbjct: 121 DGTMLRNHISRILKNHFKEKPYYVDLMELFNEV 153

[Close]
BLAST of Cucsat.G6645.T14 vs. ExPASy TrEMBL
Match: A0A5D3CCB5 (Farnesyl pyrophosphate synthase 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G001600 PE=3 SV=1)

HSP 1 Score: 309 bits (792), Expect = 2.54e-103
Identity = 146/153 (95.42%), Postives = 149/153 (97.39%), Query Frame = 0 

Query: 1   MNEFRSKFLEVYSLLKSELLHDPAFEFTDDSRQWVERMLDYNVPGGKLNRGLSVIDSYKL 60
           M+EFRSKFL+VYSLLKSELLHDPAFEFTDDSRQWVERMLDYNVPGGKLNRGLSVIDSYKL
Sbjct: 1   MSEFRSKFLDVYSLLKSELLHDPAFEFTDDSRQWVERMLDYNVPGGKLNRGLSVIDSYKL 60

Query: 61  LKQGGKLTEDEVFLASALGWCIEWLQAYFLILDDIMDNAVTRRGQPCWFRVPKVGMVAVN 120
           LKQG KLTEDEVFLASALGWCIEW QAYFL+LDDIMD AVTRRGQPCWFRVPKVGMVAVN
Sbjct: 61  LKQGEKLTEDEVFLASALGWCIEWFQAYFLVLDDIMDKAVTRRGQPCWFRVPKVGMVAVN 120

Query: 121 DGTMLRNHISRILKNHFKEKPYYVDLMELFNEV 153
           DG MLRNHISRILKNHFKEKPYYVDLMELFNEV
Sbjct: 121 DGIMLRNHISRILKNHFKEKPYYVDLMELFNEV 153

[Close]
BLAST of Cucsat.G6645.T14 vs. ExPASy TrEMBL
Match: A0A5A7U3W0 (Farnesyl pyrophosphate synthase 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold63G001570 PE=3 SV=1)

HSP 1 Score: 309 bits (792), Expect = 2.71e-103
Identity = 146/153 (95.42%), Postives = 149/153 (97.39%), Query Frame = 0 

Query: 1   MNEFRSKFLEVYSLLKSELLHDPAFEFTDDSRQWVERMLDYNVPGGKLNRGLSVIDSYKL 60
           M+EFRSKFL+VYSLLKSELLHDPAFEFTDDSRQWVERMLDYNVPGGKLNRGLSVIDSYKL
Sbjct: 1   MSEFRSKFLDVYSLLKSELLHDPAFEFTDDSRQWVERMLDYNVPGGKLNRGLSVIDSYKL 60

Query: 61  LKQGGKLTEDEVFLASALGWCIEWLQAYFLILDDIMDNAVTRRGQPCWFRVPKVGMVAVN 120
           LKQG KLTEDEVFLASALGWCIEW QAYFL+LDDIMD AVTRRGQPCWFRVPKVGMVAVN
Sbjct: 61  LKQGEKLTEDEVFLASALGWCIEWFQAYFLVLDDIMDKAVTRRGQPCWFRVPKVGMVAVN 120

Query: 121 DGTMLRNHISRILKNHFKEKPYYVDLMELFNEV 153
           DG MLRNHISRILKNHFKEKPYYVDLMELFNEV
Sbjct: 121 DGIMLRNHISRILKNHFKEKPYYVDLMELFNEV 153

[Close]
BLAST of Cucsat.G6645.T14 vs. ExPASy TrEMBL
Match: A0A1S3CJV3 (farnesyl pyrophosphate synthase 1-like OS=Cucumis melo OX=3656 GN=LOC103501271 PE=3 SV=1)

HSP 1 Score: 309 bits (792), Expect = 2.71e-103
Identity = 146/153 (95.42%), Postives = 149/153 (97.39%), Query Frame = 0 

Query: 1   MNEFRSKFLEVYSLLKSELLHDPAFEFTDDSRQWVERMLDYNVPGGKLNRGLSVIDSYKL 60
           M+EFRSKFL+VYSLLKSELLHDPAFEFTDDSRQWVERMLDYNVPGGKLNRGLSVIDSYKL
Sbjct: 1   MSEFRSKFLDVYSLLKSELLHDPAFEFTDDSRQWVERMLDYNVPGGKLNRGLSVIDSYKL 60

Query: 61  LKQGGKLTEDEVFLASALGWCIEWLQAYFLILDDIMDNAVTRRGQPCWFRVPKVGMVAVN 120
           LKQG KLTEDEVFLASALGWCIEW QAYFL+LDDIMD AVTRRGQPCWFRVPKVGMVAVN
Sbjct: 61  LKQGEKLTEDEVFLASALGWCIEWFQAYFLVLDDIMDKAVTRRGQPCWFRVPKVGMVAVN 120

Query: 121 DGTMLRNHISRILKNHFKEKPYYVDLMELFNEV 153
           DG MLRNHISRILKNHFKEKPYYVDLMELFNEV
Sbjct: 121 DGIMLRNHISRILKNHFKEKPYYVDLMELFNEV 153

[Close]
BLAST of Cucsat.G6645.T14 vs. ExPASy TrEMBL
Match: A0A1L1WQE6 (Farnesyl pyrophosphate synthase OS=Siraitia grosvenorii OX=190515 GN=FPS1 PE=2 SV=1)

HSP 1 Score: 301 bits (771), Expect = 4.17e-100
Identity = 140/153 (91.50%), Postives = 150/153 (98.04%), Query Frame = 0 

Query: 1   MNEFRSKFLEVYSLLKSELLHDPAFEFTDDSRQWVERMLDYNVPGGKLNRGLSVIDSYKL 60
           M+EFRSKFLEVYS+LKSELL+DPAFEFTDDSRQWVERMLDYNVPGGKLNRGLSVIDSYKL
Sbjct: 1   MSEFRSKFLEVYSVLKSELLNDPAFEFTDDSRQWVERMLDYNVPGGKLNRGLSVIDSYKL 60

Query: 61  LKQGGKLTEDEVFLASALGWCIEWLQAYFLILDDIMDNAVTRRGQPCWFRVPKVGMVAVN 120
           LKQG KL++DEVFLASALGWCIEWLQAYFL+LDDIMDN+VTRRGQPCWFRVPKVGMVAVN
Sbjct: 61  LKQGEKLSDDEVFLASALGWCIEWLQAYFLVLDDIMDNSVTRRGQPCWFRVPKVGMVAVN 120

Query: 121 DGTMLRNHISRILKNHFKEKPYYVDLMELFNEV 153
           DG MLRNHI RILKNHF+EKPYYVDL++LFNEV
Sbjct: 121 DGIMLRNHIPRILKNHFREKPYYVDLLDLFNEV 153

[Close]
BLAST of Cucsat.G6645.T14 vs. TAIR 10
Match: AT5G47770.1 (farnesyl diphosphate synthase 1 )

HSP 1 Score: 269.6 bits (688), Expect = 1.7e-72
Identity = 122/160 (76.25%), Postives = 143/160 (89.38%), Query Frame = 0 

Query: 3   EFRSKFLEVYSLLKSELLHDPAFEFTDDSRQWVERMLDYNVPGGKLNRGLSVIDSYKLLK 62
           + +S FL VYS+LKS+LLHDP+FEFT++SR WV+RMLDYNV GGKLNRGLSV+DS+KLLK
Sbjct: 45  DLKSTFLNVYSVLKSDLLHDPSFEFTNESRLWVDRMLDYNVRGGKLNRGLSVVDSFKLLK 104

Query: 63  QGGKLTEDEVFLASALGWCIEWLQAYFLILDDIMDNAVTRRGQPCWFRVPKVGMVAVNDG 122
           QG  LTE EVFL+ ALGWCIEWLQAYFL+LDDIMDN+VTRRGQPCWFRVP+VGMVA+NDG
Sbjct: 105 QGNDLTEQEVFLSCALGWCIEWLQAYFLVLDDIMDNSVTRRGQPCWFRVPQVGMVAINDG 164

Query: 123 TMLRNHISRILKNHFKEKPYYVDLMELFNEVVIFENTLCG 163
            +LRNHI RILK HF++KPYYVDL++LFNEV +   T CG
Sbjct: 165 ILLRNHIHRILKKHFRDKPYYVDLVDLFNEVEL--QTACG 202

[Close]
BLAST of Cucsat.G6645.T14 vs. TAIR 10
Match: AT4G17190.1 (farnesyl diphosphate synthase 2 )

HSP 1 Score: 266.2 bits (679), Expect = 1.9e-71
Identity = 122/162 (75.31%), Postives = 140/162 (86.42%), Query Frame = 0 

Query: 1   MNEFRSKFLEVYSLLKSELLHDPAFEFTDDSRQWVERMLDYNVPGGKLNRGLSVIDSYKL 60
           M + +S FL+VYS+LKS+LL DP+FEFT +SRQW+ERMLDYNV GGKLNRGLSV+DSYKL
Sbjct: 1   MADLKSTFLDVYSVLKSDLLQDPSFEFTHESRQWLERMLDYNVRGGKLNRGLSVVDSYKL 60

Query: 61  LKQGGKLTEDEVFLASALGWCIEWLQAYFLILDDIMDNAVTRRGQPCWFRVPKVGMVAVN 120
           LKQG  LTE E FL+ ALGWCIEWLQAYFL+LDDIMDN+VTRRGQPCWFR PKVGM+A+N
Sbjct: 61  LKQGQDLTEKETFLSCALGWCIEWLQAYFLVLDDIMDNSVTRRGQPCWFRKPKVGMIAIN 120

Query: 121 DGTMLRNHISRILKNHFKEKPYYVDLMELFNEVVIFENTLCG 163
           DG +LRNHI RILK HF+E PYYVDL++LFNEV     T CG
Sbjct: 121 DGILLRNHIHRILKKHFREMPYYVDLVDLFNEVEF--QTACG 160

[Close]
BLAST of Cucsat.G6645.T14 vs. TAIR 10
Match: AT4G17190.2 (farnesyl diphosphate synthase 2 )

HSP 1 Score: 112.1 bits (279), Expect = 4.6e-25
Identity = 49/67 (73.13%), Postives = 56/67 (83.58%), Query Frame = 0 

Query: 96  MDNAVTRRGQPCWFRVPKVGMVAVNDGTMLRNHISRILKNHFKEKPYYVDLMELFNEVVI 155
           MDN+VTRRGQPCWFR PKVGM+A+NDG +LRNHI RILK HF+E PYYVDL++LFNEV  
Sbjct: 1   MDNSVTRRGQPCWFRKPKVGMIAINDGILLRNHIHRILKKHFREMPYYVDLVDLFNEVEF 60

Query: 156 FENTLCG 163
              T CG
Sbjct: 61  --QTACG 65

The following BLAST results are available for this feature:
BLAST of Cucsat.G6645.T14 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q4JHN62.4e-7481.05Farnesyl pyrophosphate synthase OS=Panax ginseng OX=4054 GN=FPS PE=2 SV=1[more]
P493516.5e-7279.74Farnesyl pyrophosphate synthase 1 OS=Lupinus albus OX=3870 GN=FPS1 PE=2 SV=1[more]
Q091522.5e-7176.25Farnesyl pyrophosphate synthase 1, mitochondrial OS=Arabidopsis thaliana OX=3702... [more]
P493521.6e-7079.74Farnesyl pyrophosphate synthase 2 OS=Lupinus albus OX=3870 GN=FPS2 PE=2 SV=1[more]
Q433152.7e-7075.31Farnesyl pyrophosphate synthase 2 OS=Arabidopsis thaliana OX=3702 GN=FPS2 PE=2 S... [more]
BLAST of Cucsat.G6645.T14 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004149409.15.45e-108100.00farnesyl pyrophosphate synthase isoform X2 [Cucumis sativus] >KGN44386.1 hypothe... [more]
XP_031744290.15.49e-10698.71farnesyl pyrophosphate synthase isoform X1 [Cucumis sativus][more]
TYK08016.15.24e-10395.42farnesyl pyrophosphate synthase 1-like [Cucumis melo var. makuwa][more]
XP_008463030.15.60e-10395.42PREDICTED: farnesyl pyrophosphate synthase 1-like [Cucumis melo] >KAA0048241.1 f... [more]
XP_038900125.13.21e-10294.77farnesyl pyrophosphate synthase-like isoform X1 [Benincasa hispida][more]
BLAST of Cucsat.G6645.T14 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K9972.64e-108100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G278210 PE=3 SV=1[more]
A0A5D3CCB52.54e-10395.42Farnesyl pyrophosphate synthase 1-like OS=Cucumis melo var. makuwa OX=1194695 GN... [more]
A0A5A7U3W02.71e-10395.42Farnesyl pyrophosphate synthase 1-like OS=Cucumis melo var. makuwa OX=1194695 GN... [more]
A0A1S3CJV32.71e-10395.42farnesyl pyrophosphate synthase 1-like OS=Cucumis melo OX=3656 GN=LOC103501271 P... [more]
A0A1L1WQE64.17e-10091.50Farnesyl pyrophosphate synthase OS=Siraitia grosvenorii OX=190515 GN=FPS1 PE=2 S... [more]
BLAST of Cucsat.G6645.T14 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G47770.11.7e-7276.25farnesyl diphosphate synthase 1 [more]
AT4G17190.11.9e-7175.31farnesyl diphosphate synthase 2 [more]
AT4G17190.24.6e-2573.13farnesyl diphosphate synthase 2 [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008949Isoprenoid synthase domain superfamilyGENE3D1.10.600.10Farnesyl Diphosphate Synthasecoord: 1..167
e-value: 8.9E-58
score: 197.7
IPR008949Isoprenoid synthase domain superfamilySUPERFAMILY48576Terpenoid synthasescoord: 7..162
IPR000092Polyprenyl synthetasePFAMPF00348polyprenyl_syntcoord: 33..155
e-value: 1.2E-38
score: 132.7
IPR039702Farnesyl pyrophosphate synthase-likePANTHERPTHR11525FARNESYL-PYROPHOSPHATE SYNTHETASEcoord: 1..154
NoneNo IPR availablePANTHERPTHR11525:SF17FARNESYL PYROPHOSPHATE SYNTHASE 1-LIKEcoord: 1..154
IPR033749Polyprenyl synthetase, conserved sitePROSITEPS00723POLYPRENYL_SYNTHASE_1coord: 90..104

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cucsat.G6645Cucsat.G6645gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G6645.T14.E1Cucsat.G6645.T14.E1exon
Cucsat.G6645.T14.E2Cucsat.G6645.T14.E2exon
Cucsat.G6645.T14.E3Cucsat.G6645.T14.E3exon
Cucsat.G6645.T14.E4Cucsat.G6645.T14.E4exon
Cucsat.G6645.T14.E5Cucsat.G6645.T14.E5exon
Cucsat.G6645.T14.E6Cucsat.G6645.T14.E6exon
Cucsat.G6645.T14.E7Cucsat.G6645.T14.E7exon
Cucsat.G6645.T14.E8Cucsat.G6645.T14.E8exon
Cucsat.G6645.T14.E9Cucsat.G6645.T14.E9exon
Cucsat.G6645.T14.E10Cucsat.G6645.T14.E10exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G6645.T14.C1Cucsat.G6645.T14.C1CDS
Cucsat.G6645.T14.C2Cucsat.G6645.T14.C2CDS
Cucsat.G6645.T14.C3Cucsat.G6645.T14.C3CDS
Cucsat.G6645.T14.C4Cucsat.G6645.T14.C4CDS
Cucsat.G6645.T14.C5Cucsat.G6645.T14.C5CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cucsat.G6645.T14Cucsat.G6645.T14-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008299 isoprenoid biosynthetic process
biological_process GO:0045337 farnesyl diphosphate biosynthetic process
cellular_component GO:0005737 cytoplasm
molecular_function GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups
molecular_function GO:0004161 dimethylallyltranstransferase activity
molecular_function GO:0004337 geranyltranstransferase activity