Cucsat.G6645 (gene) Cucumber (B10) v3

Overview
NameCucsat.G6645
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionFarnesyl pyrophosphate synthase
Locationctg1502: 261979 .. 266380 (+)
RNA-Seq ExpressionCucsat.G6645
SyntenyCucsat.G6645
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TTGGTCTGTCTTGGGGGCAAATATTAGTTTCTCTCAATAATCAAAACTCGAAAGATCGAAACTGCCACCGCCACAAAAAAATAAACGTTATAAACAGAGAAACTGTTGAACATGCGCCATAACTCCCACAATCTCTCTTCATTATTGCCTATTTATTATTAAACTACTTCCACTCTTCACTCACGAACTCTTCTCCCCTTTTCCTCTCTACCCATTTTTCCAATCCCAAAATGAATGAATTCAGGTCCAAATTCTTGGAGGTTTACTCATTGTTGAAATCAGAGCTCCTTCACGACCCTGCTTTCGAGTTCACTGACGATTCTCGCCAATGGGTCGAGCGGGTAACTATCATTTTTCTGTTTGATTGTCCCTATCTTCATTCCCTTTTCATTTCTTGATGTATTTTCCATTATTCCCATGTTTTTCGTGTTCTGGGTTGGGGCTGAGTTGTTAGAATCACTTAGGAATTTGATGTGCTTTGATTCTTCTTCTTATTATGATTATTATTGCTTTTTTGCTTATTGTGTTTTGTTTGTTTGTTTGATTTGTGTGGAGATGTGGCTGATACGAATGAACTATTTAATAATTGATTTCTTAGATTGTTTTGACAGGGAGTTGGAGTAGATTATTGTGTAGTTGATTAAGTGGGGTCATATTTTGTTTCTCCTTGTTATTTGGGAGTTTTGTATTGTGGCATAATTGAGTTGACTAGAGGCCAGGCCTTTTGGTCAATGTTTGCTAGCCCTTGTAGAAGAAAGTCTACAATGCGTTGTTTTTTTATTCTTCTTTCTTAGTTTTTTTTATGACCGGCATATTTCTTTTCATTGTCATTTGGACTGCTACCAGAGATTGCAGATGGCTATGCATAACAATATAGCATGTGTTGAAAAACATCCACGTGCTCATGGAAATGCTTTATAATGTTAAAAAATAAGAACTCTAATATTTATGAAAATTTGACATTAAGAAATTAAAATATGGATATTTGTATCTCTGAGACTTTTCCGTGCGAAGGAAGCTTAGAAATCAAATCACTTAATGAATGTTTGCTGGTAATACTCGTGCATAATGCTAATGGCAGCTTAGATTTACTTTGTGCATGTTGATTTTTGCTTAAATCTACCTTTAAAATAGGGACTTCTAGTTTATCTCACGTATTGAAGAGGCTCTACGATGAGGGATTTCTTTACATGATCTAATTAATGATTTTTGGTATATGTTTAGTTTCGGCGTCGGTGGCCTGAGGGCTTAGTGTTTATGAGAAAGAAGTGTAATACTAATTGTGTTTACAATAAGTTTGCTTTGCCTGGGAAGCTGTGGTTAGACCATGCATGTCTCTGGCCTTTGATTTGTGGAATGATGGACTGTCCATTCATGTGAATATCTTAATTATTCTGTGTTTTGTTTGATATCAATTTCTATTGTCTCTCCTCTGGACTTGTACAGATGCAAATATTTTGTTCATCCTAATGAGTTTGTGTGTTCCTTTTATTGCAGATGCTGGATTACAATGTACCTGGAGGTGTGATCAAAACTCATCTAAATTGCTTTCAAGATTTTCTTGCGTTGCATGCTAAAACTTGAAGGGGAGTTATCATTCAAAAGATTGGATAGTTTTGAATTTTAATATTTTGATTTGAATGTACAATATCTTTTGCAGGAAAGTTGAACAGAGGTCTCTCTGTAATTGATAGCTACAAGTTACTGAAACAAGGGGGAAAGCTAACTGAAGATGAAGTGTTTCTGGCTTCTGCACTTGGTTGGTGCATTGAATGGGTATTGCTATTTGGCACTCTTATTTGTCGTTGATCCTCTCACAGTGAATTGTATAATCATTATATGACAACTGTGCCGACGTTTCTTAATATATCTGCATACCCAATCATCCATTTCACAGCTTCAAGCATATTTTCTTATTCTTGACGACATCATGGACAATGCTGTTACACGACGTGGACAACCTTGCTGGTTCCGGGTACCAAAGGTGTGAACTTTAGTGCAACCGAGTTATTTTCCTAGGATGTTATTGAAAGCTATGCTTAATTCTGTTTCAACCTTAACTTATCCTGTATTTCCTAGTTACAGGTTGGAATGGTTGCCGTAAATGATGGCACAATGCTACGGAACCATATCTCGAGAATCCTCAAGAATCATTTCAAGGAAAAGCCTTATTATGTGGATCTTATGGAATTGTTTAATGAGGTGGTTATCTTTGAGAATACCTTGTGCGGCCTTGTATTTTCTTTCTATCTGATTGAGTATCAACGATCTAGGTAGAGTTTCAAACAGCCTCAGGACAGATGATAGATTTAATTACCACACTTGAAGGAGAGAAAGATCTATCAAAGTACTCATTACCTCTGTAAGTGAAATTTGCTTTCTAAAAGGTTACTCCCCTATTACTCTAAATGCACTCACTGGGAATCTTTTCCTGCAGTCATCATCGCATTGTTCAGTACAAAACTGCATACTACTCGTTTTACCTCCCGGTAAGTACACTGCCTTTTATGTAAATTTTTATCATCAGAAGTAGTGAAGGTAATTGATATATATATATATATATATTGCAGTTATAAGTAAGAAACTTTAACTTTTGGTACCCAAATCAAGTAAAGTGCCTAATTTAGCTTCTAAAACAAACCACAGAACTACTTGCATGTAAACAAAATCAATAGGCTTTGCAGGTATGTGAAGAAACTAATCTCATAGGTTGTACAGATGTCAATGATAATAAAGGAGTTTAAACATGATCCCATGAACTTTAAGAATGACATGGGAGCCATCGTCTTAGATTAGATGTGTCCCTTTTTTCTTTAATTTGTATAATACAACAGTTAACACTAATATTGAACCATATGAATGAAAACAGAAAATATTAAGGATTTTTAGGTTAAGGGGAAAACCATTTTTAGAAGCAAAAAAGAAACCCACATAATAAAACAAAAGTTATGTGGACCTCTAAAATATCTGAAGGCCAAAATAGAAAATAATTAACTTGGCACATAAATTTCATACTTTATGGAAAAGTATGAATACAATTTTATGTGTCATAGGCTATTTTTTTTTCATGATGCACACACCATTCTAATTACACACTTCTAGCTTCTGATTGAACTAATGATTTTGATTTAATGACAAATATTCTTTATCTATCTCCAGTTCTATTGGAACTTCTTGTGTCTTATGGAATGCAGAAATCTACCCTGACACAACTCTTTGATTTGACACTAGGTTGCATGTGCATTGCTAATGGCAGGTGAAAATTTGGAGAATCATAATGATGTCAAGAACATTCTCATTGATATGGGAACCTATTTTCAAGTGCAGGTAGTTTGTTATTTCTTTGAACATTCTTACTTGGAGATTGCTTTAGGAAGTTGGAGTGAAACATTACCTTTTGCTTCAATTTGATCTTCAAAACCATTATGTTAGTCCAACTTTTCTGTAGGATGATTATCTGGATTGTTTTGGTCTTCCTGATGTGATAGGGAAGGTATGTTTTGAAAACTAGTACTTGAATGAGGTCCCATCATTTCTTATCCAGTTTGCTTCTGTTTTTTTGTAGAAGCAGAGACTTGATTGACTTTGAATTGAAATTGCAGATTGGAACAGATATTGAAGATTTCAAGTGCTCTTGGCTTGTTGTGAAAGCGCTAGAACTAAGTGATGAAAAACAGAAGAGTTTGCTACATGTAAGAAACCTGAAGTTCCCTCTATCAAATCTGGTTTTCTCAACTGAAGAAAAATAATGGTAGTTTATGGTCTTGTACAGGAAAATTATGGGAAAGCAGATACGGATTGTGTTGCCAGAGTGAAAGAGTTATATAAAGCTCTCAATCTTGAGGTTCTACTTCCTGCATTGTTATAAGAAGTTATTGAATGCATCTGAAAGTTCAAAGACTAGAATAAGATATTAACGAATGCTAATGTGTTGCCAGATAAATCGTTTGAAACTGTCGGTATGATCTAGTTATTTTTTGGCAGGGCGTATTTTCTGAGTACGAGAGAAAAAGCTACGAGAAGCTTCTAAAATCCATAGAAGTCCATCCAAGTGATGCAGTACAAGCAGTGTTGAAATCTTTCCTTGCAAAGATTTACAAAAGGCAGAAATAGAGAAGTCGAGAAAGATAAACTTTGTGGGGCGATGACTTGTGGATCCAAGGTGTGGTATTTTCTTGTTATACAGATTGGTGGATGTAAGTTGATTATGAATGAAGGGTTGTAATGGAATAGTGAATGAAAAGCTTGTAAGTAGCTGTGTTGTTTTGACTTCTTTATGATATTTAAGGCTTCAGAACTTTCTCAGATGGTTCGAGTACATTTCATATGTGGGTACCAATTCAATTACATTTTAAGTTTTTATCAAATGAAAAACAAAAAACGTATCTGTTGATAATCAAATTGATTCTCAATACCTTTCCGTTGGGTCATATTAATGGA

Coding sequence (CDS)

ATGGACAATGCTGTTACACGACGTGGACAACCTTGCTGGTTCCGGGTACCAAAGGTTGGAATGGTTGCCGTAAATGATGGCACAATGCTACGGAACCATATCTCGAGAATCCTCAAGAATCATTTCAAGGAAAAGCCTTATTATGTGGATCTTATGGAATTGTTTAATGAGGTAGAGTTTCAAACAGCCTCAGGACAGATGATAGATTTAATTACCACACTTGAAGGAGAGAAAGATCTATCAAAGTACTCATTACCTCTTCATCATCGCATTGTTCAGTACAAAACTGCATACTACTCGTTTTACCTCCCGGTTGCATGTGCATTGCTAATGGCAGGTGAAAATTTGGAGAATCATAATGATGTCAAGAACATTCTCATTGATATGGGAACCTATTTTCAAGTGCAGGATGATTATCTGGATTGTTTTGGTCTTCCTGATGTGATAGGGAAGATTGGAACAGATATTGAAGATTTCAAGTGCTCTTGGCTTGTTGTGAAAGCGCTAGAACTAAGTGATGAAAAACAGAAGAGTTTGCTACATGAAAATTATGGGAAAGCAGATACGGATTGTGTTGCCAGAGTGAAAGAGTTATATAAAGCTCTCAATCTTGAGGGCGTATTTTCTGAGTACGAGAGAAAAAGCTACGAGAAGCTTCTAAAATCCATAGAAGTCCATCCAAGTGATGCAGTACAAGCAGTGTTGAAATCTTTCCTTGCAAAGATTTACAAAAGGCAGAAATAG

Protein sequence

MDNAVTRRGQPCWFRVPKVGMVAVNDGTMLRNHISRILKNHFKEKPYYVDLMELFNEVEFQTASGQMIDLITTLEGEKDLSKYSLPLHHRIVQYKTAYYSFYLPVACALLMAGENLENHNDVKNILIDMGTYFQVQDDYLDCFGLPDVIGKIGTDIEDFKCSWLVVKALELSDEKQKSLLHENYGKADTDCVARVKELYKALNLEGVFSEYERKSYEKLLKSIEVHPSDAVQAVLKSFLAKIYKRQK
Homology
[Close]
BLAST of Cucsat.G6645 vs. ExPASy Swiss-Prot
Match: P49351 (Farnesyl pyrophosphate synthase 1 OS=Lupinus albus OX=3870 GN=FPS1 PE=2 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 2.4e-65
Identity = 116/136 (85.29%), Postives = 125/136 (91.91%), Query Frame = 0 

Query: 1   MDNAVTRRGQPCWFRVPKVGMVAVNDGTMLRNHISRILKNHFKEKPYYVDLMELFNEVEF 60
           MDN+ TRRGQPCWFRVPKVGM+A NDG +LRNHI RILK HF+ KPYY DL++LFNEVEF
Sbjct: 96  MDNSHTRRGQPCWFRVPKVGMIAANDGVLLRNHIPRILKKHFRGKPYYADLLDLFNEVEF 155

Query: 61  QTASGQMIDLITTLEGEKDLSKYSLPLHHRIVQYKTAYYSFYLPVACALLMAGENLENHN 120
           QTASGQMIDLITTLEGEKDLSKY+L LH RIVQYKTAYYSFYLPVACALLM GENL+NH 
Sbjct: 156 QTASGQMIDLITTLEGEKDLSKYTLSLHRRIVQYKTAYYSFYLPVACALLMVGENLDNHI 215

Query: 121 DVKNILIDMGTYFQVQ 137
           DVKNIL+DMGTYFQVQ
Sbjct: 216 DVKNILVDMGTYFQVQ 231

[Close]
BLAST of Cucsat.G6645 vs. ExPASy Swiss-Prot
Match: Q09152 (Farnesyl pyrophosphate synthase 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=FPS1 PE=2 SV=2)

HSP 1 Score: 248.1 bits (632), Expect = 7.1e-65
Identity = 114/136 (83.82%), Postives = 126/136 (92.65%), Query Frame = 0 

Query: 1   MDNAVTRRGQPCWFRVPKVGMVAVNDGTMLRNHISRILKNHFKEKPYYVDLMELFNEVEF 60
           MDN+VTRRGQPCWFRVP+VGMVA+NDG +LRNHI RILK HF++KPYYVDL++LFNEVE 
Sbjct: 138 MDNSVTRRGQPCWFRVPQVGMVAINDGILLRNHIHRILKKHFRDKPYYVDLVDLFNEVEL 197

Query: 61  QTASGQMIDLITTLEGEKDLSKYSLPLHHRIVQYKTAYYSFYLPVACALLMAGENLENHN 120
           QTA GQMIDLITT EGEKDL+KYSL +H RIVQYKTAYYSFYLPVACALLMAGENLENH 
Sbjct: 198 QTACGQMIDLITTFEGEKDLAKYSLSIHRRIVQYKTAYYSFYLPVACALLMAGENLENHI 257

Query: 121 DVKNILIDMGTYFQVQ 137
           DVKN+L+DMG YFQVQ
Sbjct: 258 DVKNVLVDMGIYFQVQ 273

[Close]
BLAST of Cucsat.G6645 vs. ExPASy Swiss-Prot
Match: P49352 (Farnesyl pyrophosphate synthase 2 OS=Lupinus albus OX=3870 GN=FPS2 PE=2 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 9.2e-65
Identity = 115/136 (84.56%), Postives = 125/136 (91.91%), Query Frame = 0 

Query: 1   MDNAVTRRGQPCWFRVPKVGMVAVNDGTMLRNHISRILKNHFKEKPYYVDLMELFNEVEF 60
           MDN+ TRRG PCWFRVPKVGM+A NDG +LRNHI RILK HF+ KPYYVDL++LFNEVEF
Sbjct: 96  MDNSHTRRGHPCWFRVPKVGMIAPNDGVVLRNHIPRILKKHFRGKPYYVDLLDLFNEVEF 155

Query: 61  QTASGQMIDLITTLEGEKDLSKYSLPLHHRIVQYKTAYYSFYLPVACALLMAGENLENHN 120
           QTASGQMIDLITTLEGEKDLSKY+L LH RIVQYKTAYYSFYLPVACALLM GENL+NH 
Sbjct: 156 QTASGQMIDLITTLEGEKDLSKYTLSLHRRIVQYKTAYYSFYLPVACALLMVGENLDNHT 215

Query: 121 DVKNILIDMGTYFQVQ 137
           DVKNIL++MGTYFQVQ
Sbjct: 216 DVKNILVEMGTYFQVQ 231

[Close]
BLAST of Cucsat.G6645 vs. ExPASy Swiss-Prot
Match: Q43315 (Farnesyl pyrophosphate synthase 2 OS=Arabidopsis thaliana OX=3702 GN=FPS2 PE=2 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 3.5e-64
Identity = 112/136 (82.35%), Postives = 124/136 (91.18%), Query Frame = 0 

Query: 1   MDNAVTRRGQPCWFRVPKVGMVAVNDGTMLRNHISRILKNHFKEKPYYVDLMELFNEVEF 60
           MDN+VTRRGQPCWFR PKVGM+A+NDG +LRNHI RILK HF+E PYYVDL++LFNEVEF
Sbjct: 96  MDNSVTRRGQPCWFRKPKVGMIAINDGILLRNHIHRILKKHFREMPYYVDLVDLFNEVEF 155

Query: 61  QTASGQMIDLITTLEGEKDLSKYSLPLHHRIVQYKTAYYSFYLPVACALLMAGENLENHN 120
           QTA GQMIDLITT +GEKDLSKYSL +H RIV+YKTAYYSFYLPVACALLMAGENLENH 
Sbjct: 156 QTACGQMIDLITTFDGEKDLSKYSLQIHRRIVEYKTAYYSFYLPVACALLMAGENLENHT 215

Query: 121 DVKNILIDMGTYFQVQ 137
           DVK +L+DMG YFQVQ
Sbjct: 216 DVKTVLVDMGIYFQVQ 231

[Close]
BLAST of Cucsat.G6645 vs. ExPASy Swiss-Prot
Match: Q4JHN6 (Farnesyl pyrophosphate synthase OS=Panax ginseng OX=4054 GN=FPS PE=2 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 6.0e-64
Identity = 113/136 (83.09%), Postives = 128/136 (94.12%), Query Frame = 0 

Query: 1   MDNAVTRRGQPCWFRVPKVGMVAVNDGTMLRNHISRILKNHFKEKPYYVDLMELFNEVEF 60
           MD++ TRRGQPCWFR+PKVGM+AVNDG +LRNHI RILK HF++KPYYVDL++LFNEVEF
Sbjct: 96  MDSSHTRRGQPCWFRLPKVGMIAVNDGILLRNHIPRILKKHFRQKPYYVDLLDLFNEVEF 155

Query: 61  QTASGQMIDLITTLEGEKDLSKYSLPLHHRIVQYKTAYYSFYLPVACALLMAGENLENHN 120
           QTASGQMIDLITTL GEKDLSKYSLP+H RIVQYKTAYYSFYLPVACALLM+GE+LE H 
Sbjct: 156 QTASGQMIDLITTLVGEKDLSKYSLPIHRRIVQYKTAYYSFYLPVACALLMSGEDLEKHT 215

Query: 121 DVKNILIDMGTYFQVQ 137
           +VK+ILI+MGTYFQVQ
Sbjct: 216 NVKDILIEMGTYFQVQ 231

[Close]
BLAST of Cucsat.G6645 vs. NCBI nr
Match: XP_004149409.1 (farnesyl pyrophosphate synthase isoform X2 [Cucumis sativus] >KGN44386.1 hypothetical protein Csa_016157 [Cucumis sativus])

HSP 1 Score: 285 bits (728), Expect = 1.71e-93
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0 

Query: 1   MDNAVTRRGQPCWFRVPKVGMVAVNDGTMLRNHISRILKNHFKEKPYYVDLMELFNEVEF 60
           MDNAVTRRGQPCWFRVPKVGMVAVNDGTMLRNHISRILKNHFKEKPYYVDLMELFNEVEF
Sbjct: 96  MDNAVTRRGQPCWFRVPKVGMVAVNDGTMLRNHISRILKNHFKEKPYYVDLMELFNEVEF 155

Query: 61  QTASGQMIDLITTLEGEKDLSKYSLPLHHRIVQYKTAYYSFYLPVACALLMAGENLENHN 120
           QTASGQMIDLITTLEGEKDLSKYSLPLHHRIVQYKTAYYSFYLPVACALLMAGENLENHN
Sbjct: 156 QTASGQMIDLITTLEGEKDLSKYSLPLHHRIVQYKTAYYSFYLPVACALLMAGENLENHN 215

Query: 121 DVKNILIDMGTYFQVQ 136
           DVKNILIDMGTYFQVQ
Sbjct: 216 DVKNILIDMGTYFQVQ 231

[Close]
BLAST of Cucsat.G6645 vs. NCBI nr
Match: TYK08016.1 (farnesyl pyrophosphate synthase 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 280 bits (716), Expect = 1.06e-91
Identity = 134/136 (98.53%), Postives = 134/136 (98.53%), Query Frame = 0 

Query: 1   MDNAVTRRGQPCWFRVPKVGMVAVNDGTMLRNHISRILKNHFKEKPYYVDLMELFNEVEF 60
           MD AVTRRGQPCWFRVPKVGMVAVNDG MLRNHISRILKNHFKEKPYYVDLMELFNEVEF
Sbjct: 96  MDKAVTRRGQPCWFRVPKVGMVAVNDGIMLRNHISRILKNHFKEKPYYVDLMELFNEVEF 155

Query: 61  QTASGQMIDLITTLEGEKDLSKYSLPLHHRIVQYKTAYYSFYLPVACALLMAGENLENHN 120
           QTASGQMIDLITTLEGEKDLSKYSLPLHHRIVQYKTAYYSFYLPVACALLMAGENLENHN
Sbjct: 156 QTASGQMIDLITTLEGEKDLSKYSLPLHHRIVQYKTAYYSFYLPVACALLMAGENLENHN 215

Query: 121 DVKNILIDMGTYFQVQ 136
           DVKNILIDMGTYFQVQ
Sbjct: 216 DVKNILIDMGTYFQVQ 231

[Close]
BLAST of Cucsat.G6645 vs. NCBI nr
Match: XP_008463030.1 (PREDICTED: farnesyl pyrophosphate synthase 1-like [Cucumis melo] >KAA0048241.1 farnesyl pyrophosphate synthase 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 280 bits (716), Expect = 1.13e-91
Identity = 134/136 (98.53%), Postives = 134/136 (98.53%), Query Frame = 0 

Query: 1   MDNAVTRRGQPCWFRVPKVGMVAVNDGTMLRNHISRILKNHFKEKPYYVDLMELFNEVEF 60
           MD AVTRRGQPCWFRVPKVGMVAVNDG MLRNHISRILKNHFKEKPYYVDLMELFNEVEF
Sbjct: 96  MDKAVTRRGQPCWFRVPKVGMVAVNDGIMLRNHISRILKNHFKEKPYYVDLMELFNEVEF 155

Query: 61  QTASGQMIDLITTLEGEKDLSKYSLPLHHRIVQYKTAYYSFYLPVACALLMAGENLENHN 120
           QTASGQMIDLITTLEGEKDLSKYSLPLHHRIVQYKTAYYSFYLPVACALLMAGENLENHN
Sbjct: 156 QTASGQMIDLITTLEGEKDLSKYSLPLHHRIVQYKTAYYSFYLPVACALLMAGENLENHN 215

Query: 121 DVKNILIDMGTYFQVQ 136
           DVKNILIDMGTYFQVQ
Sbjct: 216 DVKNILIDMGTYFQVQ 231

[Close]
BLAST of Cucsat.G6645 vs. NCBI nr
Match: XP_031744290.1 (farnesyl pyrophosphate synthase isoform X1 [Cucumis sativus])

HSP 1 Score: 280 bits (715), Expect = 1.70e-91
Identity = 136/138 (98.55%), Postives = 136/138 (98.55%), Query Frame = 0 

Query: 1   MDNAVTRRGQPCWFRVPK--VGMVAVNDGTMLRNHISRILKNHFKEKPYYVDLMELFNEV 60
           MDNAVTRRGQPCWFRVPK  VGMVAVNDGTMLRNHISRILKNHFKEKPYYVDLMELFNEV
Sbjct: 96  MDNAVTRRGQPCWFRVPKLQVGMVAVNDGTMLRNHISRILKNHFKEKPYYVDLMELFNEV 155

Query: 61  EFQTASGQMIDLITTLEGEKDLSKYSLPLHHRIVQYKTAYYSFYLPVACALLMAGENLEN 120
           EFQTASGQMIDLITTLEGEKDLSKYSLPLHHRIVQYKTAYYSFYLPVACALLMAGENLEN
Sbjct: 156 EFQTASGQMIDLITTLEGEKDLSKYSLPLHHRIVQYKTAYYSFYLPVACALLMAGENLEN 215

Query: 121 HNDVKNILIDMGTYFQVQ 136
           HNDVKNILIDMGTYFQVQ
Sbjct: 216 HNDVKNILIDMGTYFQVQ 233

[Close]
BLAST of Cucsat.G6645 vs. NCBI nr
Match: XP_038900126.1 (farnesyl pyrophosphate synthase 1-like isoform X2 [Benincasa hispida] >XP_038900127.1 farnesyl pyrophosphate synthase 1-like isoform X2 [Benincasa hispida])

HSP 1 Score: 275 bits (704), Expect = 9.82e-91
Identity = 130/136 (95.59%), Postives = 134/136 (98.53%), Query Frame = 0 

Query: 1   MDNAVTRRGQPCWFRVPKVGMVAVNDGTMLRNHISRILKNHFKEKPYYVDLMELFNEVEF 60
           MDN+VTRRGQPCWFRVPKVGMVAVNDG MLRNHISRILKNHF+EKPYYVDL+ELFNEVEF
Sbjct: 33  MDNSVTRRGQPCWFRVPKVGMVAVNDGIMLRNHISRILKNHFREKPYYVDLLELFNEVEF 92

Query: 61  QTASGQMIDLITTLEGEKDLSKYSLPLHHRIVQYKTAYYSFYLPVACALLMAGENLENHN 120
           QTASGQMIDLITTLEGEKDLSKYSLPLHHRIVQYKTAYYSFYLPVACALLMAGENL+NHN
Sbjct: 93  QTASGQMIDLITTLEGEKDLSKYSLPLHHRIVQYKTAYYSFYLPVACALLMAGENLDNHN 152

Query: 121 DVKNILIDMGTYFQVQ 136
           DVKNILIDMG YFQVQ
Sbjct: 153 DVKNILIDMGIYFQVQ 168

[Close]
BLAST of Cucsat.G6645 vs. ExPASy TrEMBL
Match: A0A0A0K997 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G278210 PE=3 SV=1)

HSP 1 Score: 285 bits (728), Expect = 8.26e-94
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0 

Query: 1   MDNAVTRRGQPCWFRVPKVGMVAVNDGTMLRNHISRILKNHFKEKPYYVDLMELFNEVEF 60
           MDNAVTRRGQPCWFRVPKVGMVAVNDGTMLRNHISRILKNHFKEKPYYVDLMELFNEVEF
Sbjct: 96  MDNAVTRRGQPCWFRVPKVGMVAVNDGTMLRNHISRILKNHFKEKPYYVDLMELFNEVEF 155

Query: 61  QTASGQMIDLITTLEGEKDLSKYSLPLHHRIVQYKTAYYSFYLPVACALLMAGENLENHN 120
           QTASGQMIDLITTLEGEKDLSKYSLPLHHRIVQYKTAYYSFYLPVACALLMAGENLENHN
Sbjct: 156 QTASGQMIDLITTLEGEKDLSKYSLPLHHRIVQYKTAYYSFYLPVACALLMAGENLENHN 215

Query: 121 DVKNILIDMGTYFQVQ 136
           DVKNILIDMGTYFQVQ
Sbjct: 216 DVKNILIDMGTYFQVQ 231

[Close]
BLAST of Cucsat.G6645 vs. ExPASy TrEMBL
Match: A0A5D3CCB5 (Farnesyl pyrophosphate synthase 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G001600 PE=3 SV=1)

HSP 1 Score: 280 bits (716), Expect = 5.12e-92
Identity = 134/136 (98.53%), Postives = 134/136 (98.53%), Query Frame = 0 

Query: 1   MDNAVTRRGQPCWFRVPKVGMVAVNDGTMLRNHISRILKNHFKEKPYYVDLMELFNEVEF 60
           MD AVTRRGQPCWFRVPKVGMVAVNDG MLRNHISRILKNHFKEKPYYVDLMELFNEVEF
Sbjct: 96  MDKAVTRRGQPCWFRVPKVGMVAVNDGIMLRNHISRILKNHFKEKPYYVDLMELFNEVEF 155

Query: 61  QTASGQMIDLITTLEGEKDLSKYSLPLHHRIVQYKTAYYSFYLPVACALLMAGENLENHN 120
           QTASGQMIDLITTLEGEKDLSKYSLPLHHRIVQYKTAYYSFYLPVACALLMAGENLENHN
Sbjct: 156 QTASGQMIDLITTLEGEKDLSKYSLPLHHRIVQYKTAYYSFYLPVACALLMAGENLENHN 215

Query: 121 DVKNILIDMGTYFQVQ 136
           DVKNILIDMGTYFQVQ
Sbjct: 216 DVKNILIDMGTYFQVQ 231

[Close]
BLAST of Cucsat.G6645 vs. ExPASy TrEMBL
Match: A0A5A7U3W0 (Farnesyl pyrophosphate synthase 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold63G001570 PE=3 SV=1)

HSP 1 Score: 280 bits (716), Expect = 5.46e-92
Identity = 134/136 (98.53%), Postives = 134/136 (98.53%), Query Frame = 0 

Query: 1   MDNAVTRRGQPCWFRVPKVGMVAVNDGTMLRNHISRILKNHFKEKPYYVDLMELFNEVEF 60
           MD AVTRRGQPCWFRVPKVGMVAVNDG MLRNHISRILKNHFKEKPYYVDLMELFNEVEF
Sbjct: 96  MDKAVTRRGQPCWFRVPKVGMVAVNDGIMLRNHISRILKNHFKEKPYYVDLMELFNEVEF 155

Query: 61  QTASGQMIDLITTLEGEKDLSKYSLPLHHRIVQYKTAYYSFYLPVACALLMAGENLENHN 120
           QTASGQMIDLITTLEGEKDLSKYSLPLHHRIVQYKTAYYSFYLPVACALLMAGENLENHN
Sbjct: 156 QTASGQMIDLITTLEGEKDLSKYSLPLHHRIVQYKTAYYSFYLPVACALLMAGENLENHN 215

Query: 121 DVKNILIDMGTYFQVQ 136
           DVKNILIDMGTYFQVQ
Sbjct: 216 DVKNILIDMGTYFQVQ 231

[Close]
BLAST of Cucsat.G6645 vs. ExPASy TrEMBL
Match: A0A1S3CJV3 (farnesyl pyrophosphate synthase 1-like OS=Cucumis melo OX=3656 GN=LOC103501271 PE=3 SV=1)

HSP 1 Score: 280 bits (716), Expect = 5.46e-92
Identity = 134/136 (98.53%), Postives = 134/136 (98.53%), Query Frame = 0 

Query: 1   MDNAVTRRGQPCWFRVPKVGMVAVNDGTMLRNHISRILKNHFKEKPYYVDLMELFNEVEF 60
           MD AVTRRGQPCWFRVPKVGMVAVNDG MLRNHISRILKNHFKEKPYYVDLMELFNEVEF
Sbjct: 96  MDKAVTRRGQPCWFRVPKVGMVAVNDGIMLRNHISRILKNHFKEKPYYVDLMELFNEVEF 155

Query: 61  QTASGQMIDLITTLEGEKDLSKYSLPLHHRIVQYKTAYYSFYLPVACALLMAGENLENHN 120
           QTASGQMIDLITTLEGEKDLSKYSLPLHHRIVQYKTAYYSFYLPVACALLMAGENLENHN
Sbjct: 156 QTASGQMIDLITTLEGEKDLSKYSLPLHHRIVQYKTAYYSFYLPVACALLMAGENLENHN 215

Query: 121 DVKNILIDMGTYFQVQ 136
           DVKNILIDMGTYFQVQ
Sbjct: 216 DVKNILIDMGTYFQVQ 231

[Close]
BLAST of Cucsat.G6645 vs. ExPASy TrEMBL
Match: A0A1L1WQE6 (Farnesyl pyrophosphate synthase OS=Siraitia grosvenorii OX=190515 GN=FPS1 PE=2 SV=1)

HSP 1 Score: 271 bits (693), Expect = 1.67e-88
Identity = 127/136 (93.38%), Postives = 134/136 (98.53%), Query Frame = 0 

Query: 1   MDNAVTRRGQPCWFRVPKVGMVAVNDGTMLRNHISRILKNHFKEKPYYVDLMELFNEVEF 60
           MDN+VTRRGQPCWFRVPKVGMVAVNDG MLRNHI RILKNHF+EKPYYVDL++LFNEVEF
Sbjct: 96  MDNSVTRRGQPCWFRVPKVGMVAVNDGIMLRNHIPRILKNHFREKPYYVDLLDLFNEVEF 155

Query: 61  QTASGQMIDLITTLEGEKDLSKYSLPLHHRIVQYKTAYYSFYLPVACALLMAGENLENHN 120
           QTASGQMIDLITTLEGEK+LSKYSLPLHHRIV+YKTAYYSFYLPVACALLMAGENL+NHN
Sbjct: 156 QTASGQMIDLITTLEGEKNLSKYSLPLHHRIVRYKTAYYSFYLPVACALLMAGENLDNHN 215

Query: 121 DVKNILIDMGTYFQVQ 136
           DVKNILIDMGTYFQVQ
Sbjct: 216 DVKNILIDMGTYFQVQ 231

[Close]
BLAST of Cucsat.G6645 vs. TAIR 10
Match: AT5G47770.1 (farnesyl diphosphate synthase 1 )

HSP 1 Score: 248.1 bits (632), Expect = 5.0e-66
Identity = 114/136 (83.82%), Postives = 126/136 (92.65%), Query Frame = 0 

Query: 1   MDNAVTRRGQPCWFRVPKVGMVAVNDGTMLRNHISRILKNHFKEKPYYVDLMELFNEVEF 60
           MDN+VTRRGQPCWFRVP+VGMVA+NDG +LRNHI RILK HF++KPYYVDL++LFNEVE 
Sbjct: 138 MDNSVTRRGQPCWFRVPQVGMVAINDGILLRNHIHRILKKHFRDKPYYVDLVDLFNEVEL 197

Query: 61  QTASGQMIDLITTLEGEKDLSKYSLPLHHRIVQYKTAYYSFYLPVACALLMAGENLENHN 120
           QTA GQMIDLITT EGEKDL+KYSL +H RIVQYKTAYYSFYLPVACALLMAGENLENH 
Sbjct: 198 QTACGQMIDLITTFEGEKDLAKYSLSIHRRIVQYKTAYYSFYLPVACALLMAGENLENHI 257

Query: 121 DVKNILIDMGTYFQVQ 137
           DVKN+L+DMG YFQVQ
Sbjct: 258 DVKNVLVDMGIYFQVQ 273

[Close]
BLAST of Cucsat.G6645 vs. TAIR 10
Match: AT4G17190.2 (farnesyl diphosphate synthase 2 )

HSP 1 Score: 245.7 bits (626), Expect = 2.5e-65
Identity = 112/136 (82.35%), Postives = 124/136 (91.18%), Query Frame = 0 

Query: 1   MDNAVTRRGQPCWFRVPKVGMVAVNDGTMLRNHISRILKNHFKEKPYYVDLMELFNEVEF 60
           MDN+VTRRGQPCWFR PKVGM+A+NDG +LRNHI RILK HF+E PYYVDL++LFNEVEF
Sbjct: 1   MDNSVTRRGQPCWFRKPKVGMIAINDGILLRNHIHRILKKHFREMPYYVDLVDLFNEVEF 60

Query: 61  QTASGQMIDLITTLEGEKDLSKYSLPLHHRIVQYKTAYYSFYLPVACALLMAGENLENHN 120
           QTA GQMIDLITT +GEKDLSKYSL +H RIV+YKTAYYSFYLPVACALLMAGENLENH 
Sbjct: 61  QTACGQMIDLITTFDGEKDLSKYSLQIHRRIVEYKTAYYSFYLPVACALLMAGENLENHT 120

Query: 121 DVKNILIDMGTYFQVQ 137
           DVK +L+DMG YFQVQ
Sbjct: 121 DVKTVLVDMGIYFQVQ 136

[Close]
BLAST of Cucsat.G6645 vs. TAIR 10
Match: AT4G17190.1 (farnesyl diphosphate synthase 2 )

HSP 1 Score: 245.7 bits (626), Expect = 2.5e-65
Identity = 112/136 (82.35%), Postives = 124/136 (91.18%), Query Frame = 0 

Query: 1   MDNAVTRRGQPCWFRVPKVGMVAVNDGTMLRNHISRILKNHFKEKPYYVDLMELFNEVEF 60
           MDN+VTRRGQPCWFR PKVGM+A+NDG +LRNHI RILK HF+E PYYVDL++LFNEVEF
Sbjct: 96  MDNSVTRRGQPCWFRKPKVGMIAINDGILLRNHIHRILKKHFREMPYYVDLVDLFNEVEF 155

Query: 61  QTASGQMIDLITTLEGEKDLSKYSLPLHHRIVQYKTAYYSFYLPVACALLMAGENLENHN 120
           QTA GQMIDLITT +GEKDLSKYSL +H RIV+YKTAYYSFYLPVACALLMAGENLENH 
Sbjct: 156 QTACGQMIDLITTFDGEKDLSKYSLQIHRRIVEYKTAYYSFYLPVACALLMAGENLENHT 215

Query: 121 DVKNILIDMGTYFQVQ 137
           DVK +L+DMG YFQVQ
Sbjct: 216 DVKTVLVDMGIYFQVQ 231

The following BLAST results are available for this feature:
BLAST of Cucsat.G6645 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P493512.4e-6585.29Farnesyl pyrophosphate synthase 1 OS=Lupinus albus OX=3870 GN=FPS1 PE=2 SV=1[more]
Q091527.1e-6583.82Farnesyl pyrophosphate synthase 1, mitochondrial OS=Arabidopsis thaliana OX=3702... [more]
P493529.2e-6584.56Farnesyl pyrophosphate synthase 2 OS=Lupinus albus OX=3870 GN=FPS2 PE=2 SV=1[more]
Q433153.5e-6482.35Farnesyl pyrophosphate synthase 2 OS=Arabidopsis thaliana OX=3702 GN=FPS2 PE=2 S... [more]
Q4JHN66.0e-6483.09Farnesyl pyrophosphate synthase OS=Panax ginseng OX=4054 GN=FPS PE=2 SV=1[more]
BLAST of Cucsat.G6645 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004149409.11.71e-93100.00farnesyl pyrophosphate synthase isoform X2 [Cucumis sativus] >KGN44386.1 hypothe... [more]
TYK08016.11.06e-9198.53farnesyl pyrophosphate synthase 1-like [Cucumis melo var. makuwa][more]
XP_008463030.11.13e-9198.53PREDICTED: farnesyl pyrophosphate synthase 1-like [Cucumis melo] >KAA0048241.1 f... [more]
XP_031744290.11.70e-9198.55farnesyl pyrophosphate synthase isoform X1 [Cucumis sativus][more]
XP_038900126.19.82e-9195.59farnesyl pyrophosphate synthase 1-like isoform X2 [Benincasa hispida] >XP_038900... [more]
BLAST of Cucsat.G6645 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K9978.26e-94100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G278210 PE=3 SV=1[more]
A0A5D3CCB55.12e-9298.53Farnesyl pyrophosphate synthase 1-like OS=Cucumis melo var. makuwa OX=1194695 GN... [more]
A0A5A7U3W05.46e-9298.53Farnesyl pyrophosphate synthase 1-like OS=Cucumis melo var. makuwa OX=1194695 GN... [more]
A0A1S3CJV35.46e-9298.53farnesyl pyrophosphate synthase 1-like OS=Cucumis melo OX=3656 GN=LOC103501271 P... [more]
A0A1L1WQE61.67e-8893.38Farnesyl pyrophosphate synthase OS=Siraitia grosvenorii OX=190515 GN=FPS1 PE=2 S... [more]
BLAST of Cucsat.G6645 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G47770.15.0e-6683.82farnesyl diphosphate synthase 1 [more]
AT4G17190.22.5e-6582.35farnesyl diphosphate synthase 2 [more]
AT4G17190.12.5e-6582.35farnesyl diphosphate synthase 2 [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000092Polyprenyl synthetasePFAMPF00348polyprenyl_syntcoord: 9..135
e-value: 2.1E-40
score: 138.5
IPR008949Isoprenoid synthase domain superfamilyGENE3D1.10.600.10Farnesyl Diphosphate Synthasecoord: 1..180
e-value: 4.7E-64
score: 218.4
IPR008949Isoprenoid synthase domain superfamilySUPERFAMILY48576Terpenoid synthasescoord: 1..180
IPR039702Farnesyl pyrophosphate synthase-likePANTHERPTHR11525FARNESYL-PYROPHOSPHATE SYNTHETASEcoord: 1..181
NoneNo IPR availablePANTHERPTHR11525:SF17FARNESYL PYROPHOSPHATE SYNTHASE 1-LIKEcoord: 1..181
IPR033749Polyprenyl synthetase, conserved sitePROSITEPS00444POLYPRENYL_SYNTHASE_2coord: 63..75

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G6645.T2Cucsat.G6645.T2mRNA
Cucsat.G6645.T9Cucsat.G6645.T9mRNA
Cucsat.G6645.T3Cucsat.G6645.T3mRNA
Cucsat.G6645.T1Cucsat.G6645.T1mRNA
Cucsat.G6645.T6Cucsat.G6645.T6mRNA
Cucsat.G6645.T4Cucsat.G6645.T4mRNA
Cucsat.G6645.T5Cucsat.G6645.T5mRNA
Cucsat.G6645.T18Cucsat.G6645.T18mRNA
Cucsat.G6645.T19Cucsat.G6645.T19mRNA
Cucsat.G6645.T10Cucsat.G6645.T10mRNA
Cucsat.G6645.T11Cucsat.G6645.T11mRNA
Cucsat.G6645.T12Cucsat.G6645.T12mRNA
Cucsat.G6645.T13Cucsat.G6645.T13mRNA
Cucsat.G6645.T14Cucsat.G6645.T14mRNA
Cucsat.G6645.T15Cucsat.G6645.T15mRNA
Cucsat.G6645.T16Cucsat.G6645.T16mRNA
Cucsat.G6645.T17Cucsat.G6645.T17mRNA
Cucsat.G6645.T21Cucsat.G6645.T21mRNA
Cucsat.G6645.T22Cucsat.G6645.T22mRNA
Cucsat.G6645.T25Cucsat.G6645.T25mRNA
Cucsat.G6645.T20Cucsat.G6645.T20mRNA
Cucsat.G6645.T7Cucsat.G6645.T7mRNA
Cucsat.G6645.T28Cucsat.G6645.T28mRNA
Cucsat.G6645.T8Cucsat.G6645.T8mRNA
Cucsat.G6645.T29Cucsat.G6645.T29mRNA
Cucsat.G6645.T24Cucsat.G6645.T24mRNA
Cucsat.G6645.T30Cucsat.G6645.T30mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045337 farnesyl diphosphate biosynthetic process
biological_process GO:0008299 isoprenoid biosynthetic process
cellular_component GO:0005737 cytoplasm
molecular_function GO:0004161 dimethylallyltranstransferase activity
molecular_function GO:0004337 geranyltranstransferase activity
molecular_function GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups