Cucsat.G6275.T9 (mRNA) Cucumber (B10) v3

Overview
NameCucsat.G6275.T9
TypemRNA
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Descriptionsomething about silencing protein 10
Locationctg1425: 2656600 .. 2657774 (+)
RNA-Seq ExpressionCucsat.G6275.T9
SyntenyCucsat.G6275.T9
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CATTTAGAACTTTTGTGCCTAATGGTATTTTTGGGTGGTTTTGTTTAATTCCTTTCTTATCATCTGAAGGTCATTTCTGGTGATGATGATTTGCCTACAAGAGACGATATTGGAGAAAGGCGGAGGAGATATGAACTTCAAATGTTGGCAAGAGCTGGAGTTGAGCCAAAGAACGGCACTAGTGTCCTTGAGAGTAACAGTGATGACGACGACAGTGTTTTGAAAGGAAATGGTGAAGTAGACTCTGAAGATGAACTCTACAAGCAAGTCAAACAACAACGTGCTGCGAAACTTGCTGCCGAAGCTGAAACTTACTCCAGGTATGTTTCTATCACCGAAGCTGAAGTTAAATATTGTCTGTTTTAGGTAATCTATGTTTCTGTATCACTATGTCTGACGAACAATCTCTGCAGGACCATGGCAACTCCATCATCTCCCGAAGTGGTGGGTGGAAAACGCAAGATCAGTTATCAAGTAAGTACTTTCTCCCTTACCACCAGCACCTCTTCCGTTCATTCAGCTTGTCACAAATGAATTCATTTACGTTCTCACACTTGATGTTTTCAGATGGAGAAAAACCGAGGCCTAACTCGAAAACGAAAGAAGTTGATAAAGAACCCAAGAAAGAAATACAAGGTACTTGACTTACACTACATGAAATCATCAACCCTTCCACCAGTACAACACATTTCTCCCTCCATTAAACTTTCCACTTACATCTGCCGTATATTTGTGAATGTGAATGGTGCAGCTGAAGTTTCAAGATGCAGCAAAACGTCGTAAAGGTCAGGTCCAGGAGGTTAAAAAGCCGATTCATATGTACGGTGGAGAGACAACAGGAATTAACCCAAGAATCAGTAGGAGCATTCGGTTTAAAAGTTAGAACTGTGGGATTGTACAAGTTTTGTCTTCTTGAGAGTAGTGGGGAATGGGGCAAGGCATTATTCTTCAAGGTATTTCTTTTTCTTAGTAATCAGTTGTCACTTAGCATTATTCTTTATGAGTGTCTTGATCTAACTACTTCAACAGATCTGTTTTGAACTTTAGATGGACCAAAAGGTTGGTCAAGCTGTAAATTTTCTTAAGAAGATGTGTGTCAGAACCAATACCAATTTTATTTTCTTTTTTTGAAAAATGTTCAAACTAATCAAAACGCTTTGTTAATTTTTTTACTT

Coding sequence (CDS)

ATGTTGGCAAGAGCTGGAGTTGAGCCAAAGAACGGCACTAGTGTCCTTGAGAGTAACAGTGATGACGACGACAGTGTTTTGAAAGGAAATGGTGAAGTAGACTCTGAAGATGAACTCTACAAGCAAGTCAAACAACAACGTGCTGCGAAACTTGCTGCCGAAGCTGAAACTTACTCCAGGACCATGGCAACTCCATCATCTCCCGAAGTGGTGGGTGGAAAACGCAAGATCAGTTATCAAATGGAGAAAAACCGAGGCCTAACTCGAAAACGAAAGAAGTTGATAAAGAACCCAAGAAAGAAATACAAGCTGAAGTTTCAAGATGCAGCAAAACGTCGTAAAGGTCAGGTCCAGGAGGTTAAAAAGCCGATTCATATGTACGGTGGAGAGACAACAGGAATTAACCCAAGAATCAGTAGGAGCATTCGGTTTAAAAGTTAG

Protein sequence

MLARAGVEPKNGTSVLESNSDDDDSVLKGNGEVDSEDELYKQVKQQRAAKLAAEAETYSRTMATPSSPEVVGGKRKISYQMEKNRGLTRKRKKLIKNPRKKYKLKFQDAAKRRKGQVQEVKKPIHMYGGETTGINPRISRSIRFKS
Homology
BLAST of Cucsat.G6275.T9 vs. ExPASy Swiss-Prot
Match: Q9JI13 (Something about silencing protein 10 OS=Mus musculus OX=10090 GN=Utp3 PE=1 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 4.0e-11
Identity = 47/130 (36.15%), Postives = 72/130 (55.38%), Query Frame = 0

Query: 16  LESNSDDDDSVLKGNGEVDSEDELYKQVKQQRAAKLAAEAETYSRTMATPSSPEVVGGKR 75
           L    D D + LK   E++   EL ++ ++  A + A E +                 KR
Sbjct: 355 LTDEPDFDGAALKYYKEMEDRQELKRKKEENSAEEQALEEQ---------------NAKR 414

Query: 76  KISYQMEKNRGLTRKRKKLIKNPRKKYKLKFQDAAKRRKGQVQEVKKPIHMYGGETTGIN 135
            I+YQ+ KNRGLT +RKK+ +NPR K++ KF+ A  RR+GQV+EV++    Y GE +GI 
Sbjct: 415 AITYQIAKNRGLTPRRKKIDRNPRVKHREKFRKAKIRRRGQVREVRREEQRYSGELSGIR 469

Query: 136 PRISRSIRFK 146
             + +SI+ K
Sbjct: 475 AGVKKSIKLK 469

BLAST of Cucsat.G6275.T9 vs. ExPASy Swiss-Prot
Match: Q9NQZ2 (Something about silencing protein 10 OS=Homo sapiens OX=9606 GN=UTP3 PE=1 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 2.0e-10
Identity = 45/133 (33.83%), Postives = 74/133 (55.64%), Query Frame = 0

Query: 13  TSVLESNSDDDDSVLKGNGEVDSEDELYKQVKQQRAAKLAAEAETYSRTMATPSSPEVVG 72
           T + + +  D+ + LK   E++   +L ++ ++    + A E +                
Sbjct: 362 TDLSDDSDFDEKAKLKYYKEIEDRQKLKRKKEENSTEEQALEDQ---------------N 421

Query: 73  GKRKISYQMEKNRGLTRKRKKLIKNPRKKYKLKFQDAAKRRKGQVQEVKKPIHMYGGETT 132
            KR I+YQ+ KNRGLT +RKK+ +NPR K++ KF+ A  RR+GQV+EV+K    Y GE +
Sbjct: 422 AKRAITYQIAKNRGLTPRRKKIDRNPRVKHREKFRRAKIRRRGQVREVRKEEQRYSGELS 479

Query: 133 GINPRISRSIRFK 146
           GI   + +SI+ K
Sbjct: 482 GIRAGVKKSIKLK 479

BLAST of Cucsat.G6275.T9 vs. ExPASy Swiss-Prot
Match: Q6AXX4 (Something about silencing protein 10 OS=Rattus norvegicus OX=10116 GN=Utp3 PE=1 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 2.6e-10
Identity = 45/130 (34.62%), Postives = 73/130 (56.15%), Query Frame = 0

Query: 16  LESNSDDDDSVLKGNGEVDSEDELYKQVKQQRAAKLAAEAETYSRTMATPSSPEVVGGKR 75
           L    + D++ L+   E++   EL ++ ++  A + A E +                 KR
Sbjct: 356 LTEEPEFDEAALEFYKEMEDRPELKRKKEENSAEEQALEEQ---------------NAKR 415

Query: 76  KISYQMEKNRGLTRKRKKLIKNPRKKYKLKFQDAAKRRKGQVQEVKKPIHMYGGETTGIN 135
            I+YQ+ KNRGLT +RKK+ +NPR K++ KF+ A  RR+GQV+EV++    Y GE +GI 
Sbjct: 416 AITYQIAKNRGLTPRRKKIDRNPRVKHREKFRRAKIRRRGQVREVRREEQRYSGELSGIR 470

Query: 136 PRISRSIRFK 146
             + +SI+ K
Sbjct: 476 AGVKKSIKLK 470

BLAST of Cucsat.G6275.T9 vs. ExPASy Swiss-Prot
Match: Q9I7W5 (Something about silencing protein 10 OS=Drosophila melanogaster OX=7227 GN=Sas10 PE=1 SV=2)

HSP 1 Score: 64.7 bits (156), Expect = 9.9e-10
Identity = 46/128 (35.94%), Postives = 74/128 (57.81%), Query Frame = 0

Query: 19  NSDDDDSVLKGNGEVDSEDELYKQVKQQRAAKLAAEAETYSRTMATPSSPEVVGGKRKIS 78
           +SDDDD+        D +D+   + K++   + A E E            E    +R I+
Sbjct: 323 SSDDDDN--------DDDDD--AESKEKDLQEEAGEEE------------EEEDARRGIT 382

Query: 79  YQMEKNRGLTRKRKKLIKNPRKKYKLKFQDAAKRRKGQVQEVKKPIHMYGGETTGINPRI 138
           YQM KN+GLT  RKK ++NPR K++ K++ A  RRKG V+ V+K +  YGGE +GI   +
Sbjct: 383 YQMAKNKGLTPHRKKELRNPRVKHRGKYRKALIRRKGAVRTVRKELQRYGGELSGIKAGV 428

Query: 139 SRSIRFKS 147
           ++S++F++
Sbjct: 443 TKSVKFRT 428

BLAST of Cucsat.G6275.T9 vs. ExPASy Swiss-Prot
Match: Q12136 (Something about silencing protein 10 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=SAS10 PE=1 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 1.8e-06
Identity = 44/153 (28.76%), Postives = 77/153 (50.33%), Query Frame = 0

Query: 4   RAGVEPKNGTSVLESNSDDDDSVLKGNGEVDSEDELYKQVKQQRAAKLAAEAETYSRTMA 63
           + G+   NG  + + +   +D  +  +     E++ Y+QV++ +  K  +  E +   + 
Sbjct: 459 KRGMHDNNGADLDDKDYGSEDEAVSRSINTQGENDYYQQVQRGKQDKKISRKEAHKNAVI 518

Query: 64  TPSSPEVV--------GGKRKISYQMEKNRGLTRKRKKLIKNPRKKYKLKFQDAAKRRKG 123
                ++          GKR I+YQ+ KN+GLT KR K  +N R K + K+Q A K+ K 
Sbjct: 519 AAREGKLAELAENVSGDGKRAINYQILKNKGLTPKRNKDNRNSRVKKRKKYQKAQKKLK- 578

Query: 124 QVQEVKK--PIHMYGGETTGINPRISRSIRFKS 147
            V+ V       +Y GE TGI   ++RS++FK+
Sbjct: 579 SVRAVYSGGQSGVYEGEKTGIKKGLTRSVKFKN 610

BLAST of Cucsat.G6275.T9 vs. NCBI nr
Match: XP_011656742.1 (something about silencing protein 10 isoform X4 [Cucumis sativus])

HSP 1 Score: 271 bits (693), Expect = 6.81e-85
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0

Query: 1   MLARAGVEPKNGTSVLESNSDDDDSVLKGNGEVDSEDELYKQVKQQRAAKLAAEAETYSR 60
           MLARAGVEPKNGTSVLESNSDDDDSVLKGNGEVDSEDELYKQVKQQRAAKLAAEAETYSR
Sbjct: 505 MLARAGVEPKNGTSVLESNSDDDDSVLKGNGEVDSEDELYKQVKQQRAAKLAAEAETYSR 564

Query: 61  TMATPSSPEVVGGKRKISYQMEKNRGLTRKRKKLIKNPRKKYKLKFQDAAKRRKGQVQEV 120
           TMATPSSPEVVGGKRKISYQMEKNRGLTRKRKKLIKNPRKKYKLKFQDAAKRRKGQVQEV
Sbjct: 565 TMATPSSPEVVGGKRKISYQMEKNRGLTRKRKKLIKNPRKKYKLKFQDAAKRRKGQVQEV 624

Query: 121 KKPIHMYGGETTGINPRISRSIRFKS 146
           KKPIHMYGGETTGINPRISRSIRFKS
Sbjct: 625 KKPIHMYGGETTGINPRISRSIRFKS 650

BLAST of Cucsat.G6275.T9 vs. NCBI nr
Match: XP_011656741.1 (something about silencing protein 10 isoform X3 [Cucumis sativus] >KAE8646730.1 hypothetical protein Csa_005136 [Cucumis sativus])

HSP 1 Score: 271 bits (693), Expect = 7.12e-85
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0

Query: 1   MLARAGVEPKNGTSVLESNSDDDDSVLKGNGEVDSEDELYKQVKQQRAAKLAAEAETYSR 60
           MLARAGVEPKNGTSVLESNSDDDDSVLKGNGEVDSEDELYKQVKQQRAAKLAAEAETYSR
Sbjct: 507 MLARAGVEPKNGTSVLESNSDDDDSVLKGNGEVDSEDELYKQVKQQRAAKLAAEAETYSR 566

Query: 61  TMATPSSPEVVGGKRKISYQMEKNRGLTRKRKKLIKNPRKKYKLKFQDAAKRRKGQVQEV 120
           TMATPSSPEVVGGKRKISYQMEKNRGLTRKRKKLIKNPRKKYKLKFQDAAKRRKGQVQEV
Sbjct: 567 TMATPSSPEVVGGKRKISYQMEKNRGLTRKRKKLIKNPRKKYKLKFQDAAKRRKGQVQEV 626

Query: 121 KKPIHMYGGETTGINPRISRSIRFKS 146
           KKPIHMYGGETTGINPRISRSIRFKS
Sbjct: 627 KKPIHMYGGETTGINPRISRSIRFKS 652

BLAST of Cucsat.G6275.T9 vs. NCBI nr
Match: XP_011656740.1 (something about silencing protein 10 isoform X2 [Cucumis sativus])

HSP 1 Score: 271 bits (693), Expect = 7.95e-85
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0

Query: 1   MLARAGVEPKNGTSVLESNSDDDDSVLKGNGEVDSEDELYKQVKQQRAAKLAAEAETYSR 60
           MLARAGVEPKNGTSVLESNSDDDDSVLKGNGEVDSEDELYKQVKQQRAAKLAAEAETYSR
Sbjct: 512 MLARAGVEPKNGTSVLESNSDDDDSVLKGNGEVDSEDELYKQVKQQRAAKLAAEAETYSR 571

Query: 61  TMATPSSPEVVGGKRKISYQMEKNRGLTRKRKKLIKNPRKKYKLKFQDAAKRRKGQVQEV 120
           TMATPSSPEVVGGKRKISYQMEKNRGLTRKRKKLIKNPRKKYKLKFQDAAKRRKGQVQEV
Sbjct: 572 TMATPSSPEVVGGKRKISYQMEKNRGLTRKRKKLIKNPRKKYKLKFQDAAKRRKGQVQEV 631

Query: 121 KKPIHMYGGETTGINPRISRSIRFKS 146
           KKPIHMYGGETTGINPRISRSIRFKS
Sbjct: 632 KKPIHMYGGETTGINPRISRSIRFKS 657

BLAST of Cucsat.G6275.T9 vs. NCBI nr
Match: XP_011656738.1 (something about silencing protein 10 isoform X1 [Cucumis sativus])

HSP 1 Score: 271 bits (693), Expect = 8.31e-85
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0

Query: 1   MLARAGVEPKNGTSVLESNSDDDDSVLKGNGEVDSEDELYKQVKQQRAAKLAAEAETYSR 60
           MLARAGVEPKNGTSVLESNSDDDDSVLKGNGEVDSEDELYKQVKQQRAAKLAAEAETYSR
Sbjct: 514 MLARAGVEPKNGTSVLESNSDDDDSVLKGNGEVDSEDELYKQVKQQRAAKLAAEAETYSR 573

Query: 61  TMATPSSPEVVGGKRKISYQMEKNRGLTRKRKKLIKNPRKKYKLKFQDAAKRRKGQVQEV 120
           TMATPSSPEVVGGKRKISYQMEKNRGLTRKRKKLIKNPRKKYKLKFQDAAKRRKGQVQEV
Sbjct: 574 TMATPSSPEVVGGKRKISYQMEKNRGLTRKRKKLIKNPRKKYKLKFQDAAKRRKGQVQEV 633

Query: 121 KKPIHMYGGETTGINPRISRSIRFKS 146
           KKPIHMYGGETTGINPRISRSIRFKS
Sbjct: 634 KKPIHMYGGETTGINPRISRSIRFKS 659

BLAST of Cucsat.G6275.T9 vs. NCBI nr
Match: XP_008460015.1 (PREDICTED: something about silencing protein 10 isoform X2 [Cucumis melo])

HSP 1 Score: 254 bits (650), Expect = 1.77e-78
Identity = 137/146 (93.84%), Postives = 140/146 (95.89%), Query Frame = 0

Query: 1   MLARAGVEPKNGTSVLESNSDDDDSVLKGNGEVDSEDELYKQVKQQRAAKLAAEAETYSR 60
           MLARAGVEPKNGTSVLESNSDDDDSVLKGNGEVDSEDELYKQVKQQRAAKLA EAE ++R
Sbjct: 509 MLARAGVEPKNGTSVLESNSDDDDSVLKGNGEVDSEDELYKQVKQQRAAKLAVEAEIHTR 568

Query: 61  TMATPSSPEVVGGKRKISYQMEKNRGLTRKRKKLIKNPRKKYKLKFQDAAKRRKGQVQEV 120
           TM TP SPEVVGGKRKISYQMEKNRGLTRKRKKL KNPRKKYKLKFQDAAKRRKGQVQEV
Sbjct: 569 TMETPPSPEVVGGKRKISYQMEKNRGLTRKRKKLTKNPRKKYKLKFQDAAKRRKGQVQEV 628

Query: 121 KKPIHMYGGETTGINPRISRSIRFKS 146
           KKPIH+YGGETTGINP ISRSIRFKS
Sbjct: 629 KKPIHLYGGETTGINPGISRSIRFKS 654

BLAST of Cucsat.G6275.T9 vs. ExPASy TrEMBL
Match: A0A0A0KD76 (Sas10 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G087170 PE=3 SV=1)

HSP 1 Score: 271 bits (693), Expect = 1.87e-85
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0

Query: 1   MLARAGVEPKNGTSVLESNSDDDDSVLKGNGEVDSEDELYKQVKQQRAAKLAAEAETYSR 60
           MLARAGVEPKNGTSVLESNSDDDDSVLKGNGEVDSEDELYKQVKQQRAAKLAAEAETYSR
Sbjct: 480 MLARAGVEPKNGTSVLESNSDDDDSVLKGNGEVDSEDELYKQVKQQRAAKLAAEAETYSR 539

Query: 61  TMATPSSPEVVGGKRKISYQMEKNRGLTRKRKKLIKNPRKKYKLKFQDAAKRRKGQVQEV 120
           TMATPSSPEVVGGKRKISYQMEKNRGLTRKRKKLIKNPRKKYKLKFQDAAKRRKGQVQEV
Sbjct: 540 TMATPSSPEVVGGKRKISYQMEKNRGLTRKRKKLIKNPRKKYKLKFQDAAKRRKGQVQEV 599

Query: 121 KKPIHMYGGETTGINPRISRSIRFKS 146
           KKPIHMYGGETTGINPRISRSIRFKS
Sbjct: 600 KKPIHMYGGETTGINPRISRSIRFKS 625

BLAST of Cucsat.G6275.T9 vs. ExPASy TrEMBL
Match: A0A1S3CBM7 (something about silencing protein 10 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498957 PE=3 SV=1)

HSP 1 Score: 254 bits (650), Expect = 8.58e-79
Identity = 137/146 (93.84%), Postives = 140/146 (95.89%), Query Frame = 0

Query: 1   MLARAGVEPKNGTSVLESNSDDDDSVLKGNGEVDSEDELYKQVKQQRAAKLAAEAETYSR 60
           MLARAGVEPKNGTSVLESNSDDDDSVLKGNGEVDSEDELYKQVKQQRAAKLA EAE ++R
Sbjct: 509 MLARAGVEPKNGTSVLESNSDDDDSVLKGNGEVDSEDELYKQVKQQRAAKLAVEAEIHTR 568

Query: 61  TMATPSSPEVVGGKRKISYQMEKNRGLTRKRKKLIKNPRKKYKLKFQDAAKRRKGQVQEV 120
           TM TP SPEVVGGKRKISYQMEKNRGLTRKRKKL KNPRKKYKLKFQDAAKRRKGQVQEV
Sbjct: 569 TMETPPSPEVVGGKRKISYQMEKNRGLTRKRKKLTKNPRKKYKLKFQDAAKRRKGQVQEV 628

Query: 121 KKPIHMYGGETTGINPRISRSIRFKS 146
           KKPIH+YGGETTGINP ISRSIRFKS
Sbjct: 629 KKPIHLYGGETTGINPGISRSIRFKS 654

BLAST of Cucsat.G6275.T9 vs. ExPASy TrEMBL
Match: A0A1S3CCS3 (something about silencing protein 10 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498957 PE=3 SV=1)

HSP 1 Score: 254 bits (650), Expect = 8.76e-79
Identity = 137/146 (93.84%), Postives = 140/146 (95.89%), Query Frame = 0

Query: 1   MLARAGVEPKNGTSVLESNSDDDDSVLKGNGEVDSEDELYKQVKQQRAAKLAAEAETYSR 60
           MLARAGVEPKNGTSVLESNSDDDDSVLKGNGEVDSEDELYKQVKQQRAAKLA EAE ++R
Sbjct: 510 MLARAGVEPKNGTSVLESNSDDDDSVLKGNGEVDSEDELYKQVKQQRAAKLAVEAEIHTR 569

Query: 61  TMATPSSPEVVGGKRKISYQMEKNRGLTRKRKKLIKNPRKKYKLKFQDAAKRRKGQVQEV 120
           TM TP SPEVVGGKRKISYQMEKNRGLTRKRKKL KNPRKKYKLKFQDAAKRRKGQVQEV
Sbjct: 570 TMETPPSPEVVGGKRKISYQMEKNRGLTRKRKKLTKNPRKKYKLKFQDAAKRRKGQVQEV 629

Query: 121 KKPIHMYGGETTGINPRISRSIRFKS 146
           KKPIH+YGGETTGINP ISRSIRFKS
Sbjct: 630 KKPIHLYGGETTGINPGISRSIRFKS 655

BLAST of Cucsat.G6275.T9 vs. ExPASy TrEMBL
Match: A0A5A7TE39 (Something about silencing protein 10 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G002010 PE=3 SV=1)

HSP 1 Score: 253 bits (646), Expect = 1.82e-78
Identity = 137/146 (93.84%), Postives = 140/146 (95.89%), Query Frame = 0

Query: 1   MLARAGVEPKNGTSVLESNSDDDDSVLKGNGEVDSEDELYKQVKQQRAAKLAAEAETYSR 60
           MLARAGVE KNGTSVLESNSDDDDSVLKGNGEVDSEDELYKQVKQQRAAKLAAEAE ++R
Sbjct: 480 MLARAGVEAKNGTSVLESNSDDDDSVLKGNGEVDSEDELYKQVKQQRAAKLAAEAEIHTR 539

Query: 61  TMATPSSPEVVGGKRKISYQMEKNRGLTRKRKKLIKNPRKKYKLKFQDAAKRRKGQVQEV 120
           TM TP SPEVVGGKRKISYQMEKNRGLTRKRKKL KNPRKKYKLKFQDAAKRRKGQVQEV
Sbjct: 540 TMETPPSPEVVGGKRKISYQMEKNRGLTRKRKKLTKNPRKKYKLKFQDAAKRRKGQVQEV 599

Query: 121 KKPIHMYGGETTGINPRISRSIRFKS 146
           KKPIH+YGGETTGINP ISRSIRFKS
Sbjct: 600 KKPIHLYGGETTGINPGISRSIRFKS 625

BLAST of Cucsat.G6275.T9 vs. ExPASy TrEMBL
Match: A0A5D3DMP9 (Something about silencing protein 10 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G001240 PE=3 SV=1)

HSP 1 Score: 253 bits (646), Expect = 6.64e-78
Identity = 137/146 (93.84%), Postives = 140/146 (95.89%), Query Frame = 0

Query: 1   MLARAGVEPKNGTSVLESNSDDDDSVLKGNGEVDSEDELYKQVKQQRAAKLAAEAETYSR 60
           MLARAGVE KNGTSVLESNSDDDDSVLKGNGEVDSEDELYKQVKQQRAAKLAAEAE ++R
Sbjct: 543 MLARAGVEAKNGTSVLESNSDDDDSVLKGNGEVDSEDELYKQVKQQRAAKLAAEAEIHTR 602

Query: 61  TMATPSSPEVVGGKRKISYQMEKNRGLTRKRKKLIKNPRKKYKLKFQDAAKRRKGQVQEV 120
           TM TP SPEVVGGKRKISYQMEKNRGLTRKRKKL KNPRKKYKLKFQDAAKRRKGQVQEV
Sbjct: 603 TMETPPSPEVVGGKRKISYQMEKNRGLTRKRKKLTKNPRKKYKLKFQDAAKRRKGQVQEV 662

Query: 121 KKPIHMYGGETTGINPRISRSIRFKS 146
           KKPIH+YGGETTGINP ISRSIRFKS
Sbjct: 663 KKPIHLYGGETTGINPGISRSIRFKS 688

BLAST of Cucsat.G6275.T9 vs. TAIR 10
Match: AT2G43650.1 (Sas10/U3 ribonucleoprotein (Utp) family protein )

HSP 1 Score: 116.3 bits (290), Expect = 2.0e-26
Identity = 77/152 (50.66%), Postives = 97/152 (63.82%), Query Frame = 0

Query: 1   MLARAGVEPKNGTSVLE----SNSDDDDSVLKGNGEVD----SEDELYKQVKQQRAAKLA 60
           +LA AGV+   G    +    ++ D+DD+    N  VD    SEDE YKQVKQ++ AK A
Sbjct: 502 VLAGAGVKSSEGDGRNKNGAFASDDEDDNDGDNNDMVDNDGESEDEFYKQVKQKQQAKRA 561

Query: 61  AEAETYSR-TMATPSSPEVVGGKRKISYQMEKNRGLTRKRKKLIKNPRKKYKLKFQDAAK 120
           A+AE YSR     PSSPE V GKR IS QM  NRGLTR+R + +KNPRKKY+  ++    
Sbjct: 562 AKAEIYSRKPHLMPSSPEHVDGKRHISNQMVSNRGLTRQRNRDLKNPRKKYRKNYEKKVT 621

Query: 121 RRKGQVQEVKKPIHMYGGETTGINPRISRSIR 144
           RRKGQV++++K    Y GE  GINP  SRSIR
Sbjct: 622 RRKGQVRDIRKQTGPYAGEARGINPNTSRSIR 653

BLAST of Cucsat.G6275.T9 vs. TAIR 10
Match: AT3G28230.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: gene silencing; LOCATED IN: nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Something about silencing protein 10 (Sas10), C-terminal (InterPro:IPR018972); BEST Arabidopsis thaliana protein match is: Sas10/U3 ribonucleoprotein (Utp) family protein (TAIR:AT2G43650.1); Has 374 Blast hits to 360 proteins in 175 species: Archae - 0; Bacteria - 4; Metazoa - 107; Fungi - 115; Plants - 56; Viruses - 0; Other Eukaryotes - 92 (source: NCBI BLink). )

HSP 1 Score: 113.6 bits (283), Expect = 1.3e-25
Identity = 75/147 (51.02%), Postives = 95/147 (64.63%), Query Frame = 0

Query: 4   RAGVEPK---NGTSVLESNSDDDDSVLKGNGEVDSEDELYKQVKQQRAAKLAAEAETYSR 63
           RA +E K   NG++VL+S         K     DSEDE Y+QVKQ++ AK AA+AE YSR
Sbjct: 32  RAALEGKHRSNGSTVLKS-----AKAQKRQKSEDSEDEFYRQVKQKQEAKKAAKAEIYSR 91

Query: 64  -TMATPSSPEVVGGKRKISYQMEKNRGLTRKRKKLIKNPRKKYKLKFQDAAKRRKGQVQE 123
                PSSP++V G+R IS QM  NRGLTRKR K  KNPRKKY+ + +     RKGQV++
Sbjct: 92  KPYLIPSSPDLVDGRRLISNQMASNRGLTRKRNKDHKNPRKKYRDQHKKIVINRKGQVRD 151

Query: 124 VKKPIHMYGGETTGINPRISRSIRFKS 147
           ++  +  Y GET GINP  SRSIR K+
Sbjct: 152 IRTQVGPYAGETRGINPYTSRSIRIKN 173

BLAST of Cucsat.G6275.T9 vs. TAIR 10
Match: AT3G28230.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: gene silencing; LOCATED IN: nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Something about silencing protein 10 (Sas10), C-terminal (InterPro:IPR018972); BEST Arabidopsis thaliana protein match is: Sas10/U3 ribonucleoprotein (Utp) family protein (TAIR:AT2G43650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 113.6 bits (283), Expect = 1.3e-25
Identity = 75/147 (51.02%), Postives = 95/147 (64.63%), Query Frame = 0

Query: 4   RAGVEPK---NGTSVLESNSDDDDSVLKGNGEVDSEDELYKQVKQQRAAKLAAEAETYSR 63
           RA +E K   NG++VL+S         K     DSEDE Y+QVKQ++ AK AA+AE YSR
Sbjct: 33  RAALEGKHRSNGSTVLKS-----AKAQKRQKSEDSEDEFYRQVKQKQEAKKAAKAEIYSR 92

Query: 64  -TMATPSSPEVVGGKRKISYQMEKNRGLTRKRKKLIKNPRKKYKLKFQDAAKRRKGQVQE 123
                PSSP++V G+R IS QM  NRGLTRKR K  KNPRKKY+ + +     RKGQV++
Sbjct: 93  KPYLIPSSPDLVDGRRLISNQMASNRGLTRKRNKDHKNPRKKYRDQHKKIVINRKGQVRD 152

Query: 124 VKKPIHMYGGETTGINPRISRSIRFKS 147
           ++  +  Y GET GINP  SRSIR K+
Sbjct: 153 IRTQVGPYAGETRGINPYTSRSIRIKN 174

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9JI134.0e-1136.15Something about silencing protein 10 OS=Mus musculus OX=10090 GN=Utp3 PE=1 SV=1[more]
Q9NQZ22.0e-1033.83Something about silencing protein 10 OS=Homo sapiens OX=9606 GN=UTP3 PE=1 SV=1[more]
Q6AXX42.6e-1034.62Something about silencing protein 10 OS=Rattus norvegicus OX=10116 GN=Utp3 PE=1 ... [more]
Q9I7W59.9e-1035.94Something about silencing protein 10 OS=Drosophila melanogaster OX=7227 GN=Sas10... [more]
Q121361.8e-0628.76Something about silencing protein 10 OS=Saccharomyces cerevisiae (strain ATCC 20... [more]
Match NameE-valueIdentityDescription
XP_011656742.16.81e-85100.00something about silencing protein 10 isoform X4 [Cucumis sativus][more]
XP_011656741.17.12e-85100.00something about silencing protein 10 isoform X3 [Cucumis sativus] >KAE8646730.1 ... [more]
XP_011656740.17.95e-85100.00something about silencing protein 10 isoform X2 [Cucumis sativus][more]
XP_011656738.18.31e-85100.00something about silencing protein 10 isoform X1 [Cucumis sativus][more]
XP_008460015.11.77e-7893.84PREDICTED: something about silencing protein 10 isoform X2 [Cucumis melo][more]
Match NameE-valueIdentityDescription
A0A0A0KD761.87e-85100.00Sas10 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G087170 PE=3 ... [more]
A0A1S3CBM78.58e-7993.84something about silencing protein 10 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A1S3CCS38.76e-7993.84something about silencing protein 10 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A5A7TE391.82e-7893.84Something about silencing protein 10 isoform X1 OS=Cucumis melo var. makuwa OX=1... [more]
A0A5D3DMP96.64e-7893.84Something about silencing protein 10 isoform X1 OS=Cucumis melo var. makuwa OX=1... [more]
Match NameE-valueIdentityDescription
AT2G43650.12.0e-2650.66Sas10/U3 ribonucleoprotein (Utp) family protein [more]
AT3G28230.11.3e-2551.02FUNCTIONS IN: molecular_function unknown; INVOLVED IN: gene silencing; LOCATED I... [more]
AT3G28230.21.3e-2551.02FUNCTIONS IN: molecular_function unknown; INVOLVED IN: gene silencing; LOCATED I... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018972Sas10 C-terminal domainPFAMPF09368Sas10coord: 72..144
e-value: 8.4E-26
score: 90.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 106..120
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 21..39
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 55..78
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..39
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 106..133
NoneNo IPR availablePANTHERPTHR13237:SF8SOMETHING ABOUT SILENCING PROTEIN 10coord: 3..144
IPR007146Sas10/Utp3/C1DPANTHERPTHR13237SOMETHING ABOUT SILENCING PROTEIN 10-RELATEDcoord: 3..144

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cucsat.G6275Cucsat.G6275gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G6275.T9.E1Cucsat.G6275.T9.E1exon
Cucsat.G6275.T9.E2Cucsat.G6275.T9.E2exon
Cucsat.G6275.T9.E3Cucsat.G6275.T9.E3exon
Cucsat.G6275.T9.E4Cucsat.G6275.T9.E4exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G6275.T9.C1Cucsat.G6275.T9.C1CDS
Cucsat.G6275.T9.C2Cucsat.G6275.T9.C2CDS
Cucsat.G6275.T9.C3Cucsat.G6275.T9.C3CDS
Cucsat.G6275.T9.C4Cucsat.G6275.T9.C4CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cucsat.G6275.T9Cucsat.G6275.T9-proteinpolypeptide