Cucsat.G6275 (gene) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TGAAAGTATTTTATCTTAATCTTTCAAAAATAAAATATAAAATAAAGAAAGAAAGACGTTGTTAAACCCTAACCCCTTTATTTTCCTCTCACACTCACTCTCACGTGCTCACCTTCTTCCCGCCGGCGCCTCTCCCCTTTCTGTTTCAGCACCTCAGTGTCGCCGTCGCCTTTCTCCGATTCAGTGCTGCCGTAGCCTGACTCCGCTCAGATTGCACCAATTTTCTACTCTCTTCTTGTTACTGGTATTCTCGAACTCTCCAACTATTTCTTCCTTCTCTATTGAAAAATCAATTTAGAACTTTGTGTAACGAAAGAATGGAGGACTTGTATTGAATTTGATTTTTTTTTTTTTGTTGATTAAAATCACCGAATAGCAATGGAAATAGGAAAAGATAAAAAAACCATCAGCCTCGCGTCAAAATGGGATTTTTCGAAGTGATGTATGCTGTTTTATGCCTTTTAGTTTCTCGCATTTGTCTGTCAATTGAGGCTTGGGTAATCTGTACATCTCTTCGGTCTCTCCCGAAAATTGTGTTGTTTCCAATCTCCTAAATCATCCAAAGCACCACCCACCATGAGTTTTCCAGCATTTCTCTTCTTAACCATTAAGTATTATGTTTAGCAATACTTGGTCATACCAATTTATGATTTGTAAAATGTTCTTAAGTAAAATTGAGGCTCTTGTATCATACCCTTTTGAGGCTTATGCCTCGCCTTCAAGAAGCCAGCCTCAAAACCACCTTTAGCCTTTAAAATATTGAGTACTTCTATTACATTACTGGCATTTTAAAAAAAATAAGAAGCCTTTGATATTCATTTTATTTTAATAATCAATAAGAAGCCTTGCTTTATGTTGAAAAAACCCCACGACATGAGGGTGTCAGAAGCTACTTTTGCTTTGCATTGAAATCGTAGTGTTGATTATAGATAATAGTAGACAATTTCCATTTTTTAACGCTCAATTGACTTTCTGTGGAACATGATTCTGGATACTACTACAACCTATGTTCTATTCTACTCTTTGGATGATAAAACTTTTGAAATTTGATGCCGTTTATTTTTGTTATAGGCTTACAGCCAGCCAAAAGTTTGTTGGAGGTGTCTTATCCTCTTCATTGAATTGAAGTTAGCTAATTATGGGCAAGAGAAAGAGTTATAAGCAGGACAAAAAGAACTCTAAGAGAAGAGTTGCCGAAGATGATGCTGCCTCTGAAGATATGGACGATGAAATTGATGCCTGTAAGATCTTTGTGTCATTTAATGATATTTTTAATGTTTTCTTGTTCACGGAGTTTTTAATTTTTTTTCTTTTTTGGTATCTTTAATATCCACGTGCAAAATGAAAATGTGAAGTCTAATGATGTGTGTCACACTTTTAGTTCACAGGCAGAGGGATGTCATTCCTCTTGATATCAATGGTGATGCTACAGAGTCGGATGATGATGCTGAGCAACCTGTTTTCAATTTAGAGGTTCCTACGCTTTCTTTTTTCTCCTTGTGAAAATCTTTGTCAATATTCTTTACTTCCAGTTCCAGGCATTCTCCTTGTTTAATGCATAGTTGACCTGAGCATTTCTTGTGTTTGGATGTACTTAACAAAATGACCAGAATTAAACTGTATGTAATATTATTCTTTTACAATTTTGGACCACAAAATTTTAAACAATAGGAAGGGATTGGGGTCGTATCATTTTTATTTCGCAAGAGATTTAGGATGAGTGAGGGGATGTGAGATGGTAGAGCTGTATTTTCTTGAGCAGTGACAAGAAGAAATTTAGGTGCTGTAGACCTCTTTAATCAGCATTAGATTTACTTTTCTATATTTTTGTAGTTGTGAAGTTTAGTTTTCTTCCCTGTTTTCTCAATATTTTATGCTTATTGGAACCTCATTAGACGTTAAGTAATTTCTCTCTACTGGTGCTTCTGTTGTTTGAATCAGAAATGGGTATAAGTAGATGACCAATGGGGAGGAATCTTCCCTCATTCTGCTTTGTTACTTTAGATGCTAAGTTTTCATTCTCTTAATACGTGTGATGTTGGAACATATGATGAAAGTGGGGTTGTGTATTTGGAGCTTGTCGAGGAATCACTTGAGAATTTGGCAGAAATCAAACATCTTTAATTTCTATTATGCGTTACAAACACTGTTTCTGCCTTTCTCCAGTGCAATTACTAGTACAATTCTTTCACTGGTCCATGCAAGGGAGTTTCTAGTTCCTGCTAAAGTGATTTTAATTCTTGCATTTGCTCTATCTTTTCAGGGCATTGATGATGAAGATGATGAAGATGATGAAGATATCCGTGATACTGGTTTGGCTGCAAAAAGTAAGAAATGTGGTTTGAGAAGTTCTTTTCATCTTCAGTAGCATGTTTTCCAACACACGGGCCCCTTAGATCCCCAATACCTCCAGAATTTTAAAATTAATAAAATAATCAGACGCATTCATGTTCATAGTGTCTCCTTGATGGACACATCATGTAAATTAGTATACGCTTTTTGTAGATTTTCTTTACATGAAAGAACAGAAAGAAGTTTGAAAGAAGGGTCACAAGAAAATAAAAGACCAAAAGAACTCTGGGATTACAAAAAGAAGTGTACGAAATTTCCTTTGGCCCATGTTTTTTAGACTCCATGTAGTTATCCTTTTTTGATATATAAAAACCTACTACATTTGATGATCCTCAATCTCTCTGTTTTTCTTTTTATCAATATTGCGTGCTACCTGTAATAAAATTAAAGATTCTCTGTCATCTCTTTCTTTGAATATTCTTGATCAATATGGTTTTTATCCTCTAATGAACCATTTTGTCTGTTTGTCATAGTTGCTAGGCAACAGAAGTTCTTGCGGGAAAAGTTTGGTGGGGTGGAAGATGAAATGCACGAGGATGAAGATGAAGACATGGATGAACAAAAGACTATATGGGGTGGAAGGGAAGGCAAATACTACGATGCTGATAATCGTGATTTTGAAGTGAGGATCTAAATATGATGCATTCATTTTCTTACCACTTATAACCAGTCATTTTACCTTTCTAGAGTTTGATTGGCAATGTGATTGGAACTGTGTTTCTGATGCAGTAATTGCAAAGCTTAGGAATTTTTATGAATAATATTTTTGATGATGAATTAATGAGAGGAGAAGCCTTTTTATAGGCTGGAAGTTTACAAGAGTTGTTAGAAGTTATTTATTATAGAACTAACTTGGAGTTGAGTTAAACCAACTCAAGATACAAGATTAGTAACTCAAGATACAAAAGTTTTAACTAAAGATAACTAATCCTAAAATACAAGAATGGTAATTCAAGATACTCAAGAATTAGCTAAAGAACTTAAAGAAACATCAAGAAAGGAGGATGTTCTACATCAGTTTCTTTTCTATTGTTGTTAATGCACTGTGTTTTAGTTTATATTTTCATTTTTATCTCATAGACTTCAAACTACAATCAAAATAATTGTTTGTTTTTTAACTTAATGAAGATCCAATCAAGTGATGATGAGTCCCTTGCAGAAGAGGAGGAAGAGGTTATTCGATTGCAGAAGGAGAAAGCAAAAACTCTCTCATTGGAAGATTTTGGCCTTGAAGATGAGAGTGACGAGGAATTAACTCTAGAGGTGCTTGCTTCTGCATTTGTTCTCTTGTGTTGAATTGTCAAATTTCTTTCTAGGGAAAAAAGAAATCAGTTGGAAAAGTACTTGGCTCTAAGACTATAAATTCAACTCTTTTATGACTAAATTCTGTCTTCACAGGAAATGAATGGAAAAGGAGTTGATGCAAAAACTTCAGCAAGAAAGGAAGCTTCAGATGATATGGATGCTACATATCAGGAAATCGCTAAAGACGTGAATGCTTTAACAAGGGAGGAGCAGATGGATGTCTTGAGCAGGTATTGTTTATTTCTTCATTTGGTTGTCATCAACTTCATTTCATTTTAACTTAGCCTCCACCTGTGTTCAAAGCCTTTTCCAAGAAAAAGAAAAAAAAACTCAGTTACCTGCAACCGCTGGCTTACTGTTCTCTTGTGCTAGTCAAGATTAAAGTGATTGTGAAATTTCTTGTGAGTCTTTAATCCATTCAAAAAGATGTTATGAGTCTCTCATCTTATCTCTTCACTCAAAAAGATCTTATGAGTCTCCCGTCCTATATAAAGCATCCAAAAAGGGTGTTTGACAATTATTAAAAGGTCCCCCTCCACTACCTCTTCACTCGATATTTCCAAAAGTTCTCTCGGTCGCATGCCTAGTTGTAGTATACCTAGGTGCTATAGGTTCAAGGTGAGACCCAGAAAGTAAGATGCGTATTAGGTGTGGGCCTTTTTGTTACGCCTTGTTCTTAAGGCCCCACAAGACTATTGCACTTTATTGTCCCTTAAAGGTTTAAAAAACAGTGCCCCTCAGGGAACTTTTTGAACTTGTAACATGAAAATGAATAGCGTCCTTAAAATCTGATTTGGATTGCCTCTTTCTGTTGGAGGTTGAAGTCCTCAATGGTTTTCTTACATTTTCTGGTTGTGAAAATCTTGGTATTACAGTTCCGCTCCAGAGTTAATTGGTTTGCTGACTGAATTGAATGAAGCGGTGGATCAGCTTGAGAACAAAGTCAATCCAATACTGAACAAGGTACTCTTTTCTCTTGTTTAGCCTGAAATTGGTGACATTCATGCTTAATGCTGCTGAGGATAATCTAGAATGTCTAGACACAAGTATGGTTTCCTAGTGAACATAAGTATTTAAATGGGCACTTGTGTTTTGTTTACGAAGTTATATTACTCTAGGAGTACAAACTCCATTTTCATTAATCATTACTGTGTTTATTAGGATTCTGCGTCACTGAGTTGAGTTTGAACTCAACCAATTTTCTGTTTACTTAGACGATGGGCATTACTAACTTACTGGTCTTTATTCTGTCAATGATTTTTTAAGGTTCAAAATGGGCAAATTGCAGTGGGAGGAGGACTGCAATATTTGGAGCTAAAGCAGGTTCTTTTGCTCTCTTATTGCCAAGCTATAACCTTCTATCTTCTCCTGAAGTCTGAGGGGCAAGCAGTACGGGATCATCCTGTGATTGCTCGCCTTGTAGAGATTAGAAGTTTATTGGACAAGGTCTTCCCCCCTTTCAATTTAGTTTATATGCTTTACTGTTGTCTGTTTTTTCCTTTTAATTTTGTCACCCCTCCGTAAACTTGTAAGTTTGAAATTGTTTTGCACCTGACAGGTAAAACAACTTGATGAGAATCTTCCATCGGATTTAGAAGATATCATTAACATATATCATCAGCAAGAAACAGATGGAAAATTGAAGAAAGAGAATTGTTCTATTCCAGCTGAGTTCTTTGCAAAAGATCAGGGGTCTTCTCATCACTCTTATAGCCAAGAAGTGGAATTGGTATTACTTTAATCTTGCACTAGGGTTTTGTTTACACATAATTTAAAATGTCGTAATGTCTCAAGCATGTCAATTTATTACAACATTTATCCATAACGACGTTTATTCTATGTTTGTTACTTCTTCCGAAGGAAAATAATTTAGAAATTTTTGTCCATTCCACTCTGCATGTGATGCTTCTATTTTTGGAAAAAAAAAACTTTGGTAAATATTATAGTGTTTTATATTTGTCATATGTTTGGCAATGGTACACGTCTCATTTATGATACATGTAGTTATGAACAATCTACATGTATGATTACTTTTCTCTATTGGACATTTCCATTATTTGGTCTCCTACGGTGATATATATCATATCTTCAAATTGGAGTTATTCTTAGTACCATGAATGCCTCTCTATAATTGCAAAATCAGGAAGACAAAATATTTAGGCTATGGGCTATTTTTAAATTTAAGTAGTTTTTTGCTAATGCATAATCTATACATGTATGTATGTGTATATATTTGTTCTGAAAATTTTATTTACAGAAGTTTCGGTACCTTTTTTATCTTTCTTTGGATTAATCATCATCCGCGATGATGTGTTGAAGGCTTGACACATCCTGAAATGACTTGTAAGCTTTTATTGTAGAAGCAGCCCAATCCAAAAACTGGCTCAAAGAAGGCGGACAAATTGAAGGAGAAAGGGAAGAAGGTAGGGAAGCATAAACAAGTGGTATTATGCACTACAAAATAAGTTGATGAAAATTTCTTTTTCTAATTCGTTATTGCTCTTATCATCCTGTTTCTGTTTGGGTGTTTTTAGACACATTTTTTCAAAATTTTATTTTTTCATTTGCAGGATGATCAAATGAGTGCCCAGAGCATGGAAATGCTTAAAGTAAGAGCCCTCCTTGAAGAAAAACTAAAACAGAAGAACTTCACTCTGATTGAACCAAAGCAATCTGGAGCCAAAAAGCATCTGCAACCAATTAATCGGTATTGCTTTGGTTATTTTATCACATACTCCTATTATTCTCTTGTATTATGACAATTAATTTATCTTATTTGGACAATGCAGGAAGCTTGAAGCATATAACGATTTTAATGATGAAACTGATACTCAGGCTGCTAAGCGGAAGGGCCCAGATAACTCTGCTAAGGCAGCTGATCTCAAACGACTTGTTTCTACGAAACTGAAGCCGAAGGTATGAACTATGGTATTATAACTCTAACAAGGATTATTTAGATAAATAAGGAAATTGGGTTGTGCGCTAACTTTAGGAATTGGATGAAAACAGTCAAATTGAGTCATCGATCTTTTATTTTTTAGTTTTTAAGATGAATACAAAAATTGATAGCCCAAACCAAGGGGAGCTGTGATGTAAGAAAGGAAAGCCAACAAAACCAAACAAAAGAATTTAAACTATTGTACATAAGAAACACCAACTCTTTGGTTAGACATTCACTTTGATCTCTTTGGTTATAATTATATATACTGGATGAATTCAACATAAACATGAATATGATACATAGCAGAAAAACAGAAATTGCATGTGGGGATATAAAAATTCTTTTCTAAATCACAATGCCTTGCATTTAGAACTTTTGTGCCTAATGGTATTTTTGGGTGGTTTTGTTTAATTCCTTTCTTATCATCTGAAGGTCATTTCTGGTGATGATGATTTGCCTACAAGAGACGATATTGGAGAAAGGCGGAGGAGATATGAACTTCAAATGTTGGCAAGAGCTGGAGTTGAGCCAAAGAACGGCACTAGTGTCCTTGAGAGTAACAGTGATGACGACGACAGTGTTTTGAAAGGAAATGGTGAAGTAGACTCTGAAGATGAACTCTACAAGCAAGTCAAACAACAACGTGCTGCGAAACTTGCTGCCGAAGCTGAAACTTACTCCAGGTATGTTTCTATCACCGAAGCTGAAGTTAAATATTGTCTGTTTTAGGTAATCTATGTTTCTGTATCACTATGTCTGACGAACAATCTCTGCAGGACCATGGCAACTCCATCATCTCCCGAAGTGGTGGGTGGAAAACGCAAGATCAGTTATCAAGTAAGTACTTTCTCCCTTACCACCAGCACCTCTTCCGTTCATTCAGCTTGTCACAAATGAATTCATTTACGTTCTCACACTTGATGTTTTCAGATGGAGAAAAACCGAGGCCTAACTCGAAAACGAAAGAAGTTGATAAAGAACCCAAGAAAGAAATACAAGGTACTTGACTTACACTACATGAAATCATCAACCCTTCCACCAGTACAACACATTTCTCCCTCCATTAAACTTTCCACTTACATCTGCCGTATATTTGTGAATGTGAATGGTGCAGCTGAAGTTTCAAGATGCAGCAAAACGTCGTAAAGGTCAGGTCCAGGAGGTTAAAAAGCCGATTCATATGTACGGTGGAGAGACAACAGGAATTAACCCAAGAATCAGTAGGAGCATTCGGTTTAAAAGTTAGAACTGTGGGATTGTACAAGTTTTGTCTTCTTGAGAGTAGTGGGGAATGGGGCAAGGCATTATTCTTCAAGGTATTTCTTTTTCTTAGTAATCAGTTGTCACTTAGCATTATTCTTTATGAGTGTCTTGATCTAACTACTTCAACAGATCTGTTTTGAACTTTAGATGGACCAAAAGGTTGGTCAAGCTGTAAATTTTCTTAAGAAGATGTGTGTCAGAACCAATACCAATTTTATTTTCTTTTTTTGAAAAATGTTCAAACTAATCAAAACGCTTTGTTAATTTTTTTACTTATCAAATTTAGTTTAAATAGAAGCAAAGAAGAAAGGTAGAAGAATTTCTATATCTATAAGAATACGTCTCTACT ATGGGCAAGAGAAAGAGTTATAAGCAGGACAAAAAGAACTCTAAGAGAAGAGTTGCCGAAGATGATGCTGCCTCTGAAGATATGGACGATGAAATTGATGCCTTTCACAGGCAGAGGGATGTCATTCCTCTTGATATCAATGGTGATGCTACAGAGTCGGATGATGATGCTGAGCAACCTGTTTTCAATTTAGAGGGCATTGATGATGAAGATGATGAAGATGATGAAGATATCCGTGATACTGGTTTGGCTGCAAAAATTGCTAGGCAACAGAAGTTCTTGCGGGAAAAGTTTGGTGGGGTGGAAGATGAAATGCACGAGGATGAAGATGAAGACATGGATGAACAAAAGACTATATGGGGTGGAAGGGAAGGCAAATACTACGATGCTGATAATCGTGATTTTGAAATCCAATCAAGTGATGATGAGTCCCTTGCAGAAGAGGAGGAAGAGGTTATTCGATTGCAGAAGGAGAAAGCAAAAACTCTCTCATTGGAAGATTTTGGCCTTGAAGATGAGAGTGACGAGGAATTAACTCTAGAGGAAATGAATGGAAAAGGAGTTGATGCAAAAACTTCAGCAAGAAAGGAAGCTTCAGATGATATGGATGCTACATATCAGGAAATCGCTAAAGACGTGAATGCTTTAACAAGGGAGGAGCAGATGGATGTCTTGAGCAGTTCCGCTCCAGAGTTAATTGGTTTGCTGACTGAATTGAATGAAGCGGTGGATCAGCTTGAGAACAAAGTCAATCCAATACTGAACAAGGTTCAAAATGGGCAAATTGCAGTGGGAGGAGGACTGCAATATTTGGAGCTAAAGCAGGTTCTTTTGCTCTCTTATTGCCAAGCTATAACCTTCTATCTTCTCCTGAAGTCTGAGGGGCAAGCAGTACGGGATCATCCTGTGATTGCTCGCCTTGTAGAGATTAGAAGTTTATTGGACAAGGTAAAACAACTTGATGAGAATCTTCCATCGGATTTAGAAGATATCATTAACATATATCATCAGCAAGAAACAGATGGAAAATTGAAGAAAGAGAATTGTTCTATTCCAGCTGAGTTCTTTGCAAAAGATCAGGGGTCTTCTCATCACTCTTATAGCCAAGAAGTGGAATTGAAGCAGCCCAATCCAAAAACTGGCTCAAAGAAGGCGGACAAATTGAAGGAGAAAGGGAAGAAGGATGATCAAATGAGTGCCCAGAGCATGGAAATGCTTAAAGTAAGAGCCCTCCTTGAAGAAAAACTAAAACAGAAGAACTTCACTCTGATTGAACCAAAGCAATCTGGAGCCAAAAAGCATCTGCAACCAATTAATCGGAAGCTTGAAGCATATAACGATTTTAATGATGAAACTGATACTCAGGCTGCTAAGCGGAAGGGCCCAGATAACTCTGCTAAGGCAGCTGATCTCAAACGACTTGTTTCTACGAAACTGAAGCCGAAGGTCATTTCTGGTGATGATGATTTGCCTACAAGAGACGATATTGGAGAAAGGCGGAGGAGATATGAACTTCAAATGTTGGCAAGAGCTGGAGTTGAGCCAAAGAACGGCACTAGTGTCCTTGAGAGTAACAGTGATGACGACGACAGTGTTTTGAAAGGAAATGGTGAAGTAGACTCTGAAGATGAACTCTACAAGCAAGTCAAACAACAACGTGCTGCGAAACTTGCTGCCGAAGCTGAAACTTACTCCAGGACCATGGCAACTCCATCATCTCCCGAAGTGGTGGGTGGAAAACGCAAGATCAGTTATCAAATGGAGAAAAACCGAGGCCTAACTCGAAAACGAAAGAAGTTGATAAAGAACCCAAGAAAGAAATACAAGCTGAAGTTTCAAGATGCAGCAAAACGTCGTAAAGGTCAGGTCCAGGAGGTTAAAAAGCCGATTCATATGTACGGTGGAGAGACAACAGGAATTAACCCAAGAATCAGTAGGAGCATTCGGTTTAAAAGTTAG MGKRKSYKQDKKNSKRRVAEDDAASEDMDDEIDAFHRQRDVIPLDINGDATESDDDAEQPVFNLEGIDDEDDEDDEDIRDTGLAAKIARQQKFLREKFGGVEDEMHEDEDEDMDEQKTIWGGREGKYYDADNRDFEIQSSDDESLAEEEEEVIRLQKEKAKTLSLEDFGLEDESDEELTLEEMNGKGVDAKTSARKEASDDMDATYQEIAKDVNALTREEQMDVLSSSAPELIGLLTELNEAVDQLENKVNPILNKVQNGQIAVGGGLQYLELKQVLLLSYCQAITFYLLLKSEGQAVRDHPVIARLVEIRSLLDKVKQLDENLPSDLEDIINIYHQQETDGKLKKENCSIPAEFFAKDQGSSHHSYSQEVELKQPNPKTGSKKADKLKEKGKKDDQMSAQSMEMLKVRALLEEKLKQKNFTLIEPKQSGAKKHLQPINRKLEAYNDFNDETDTQAAKRKGPDNSAKAADLKRLVSTKLKPKVISGDDDLPTRDDIGERRRRYELQMLARAGVEPKNGTSVLESNSDDDDSVLKGNGEVDSEDELYKQVKQQRAAKLAAEAETYSRTMATPSSPEVVGGKRKISYQMEKNRGLTRKRKKLIKNPRKKYKLKFQDAAKRRKGQVQEVKKPIHMYGGETTGINPRISRSIRFKS Homology
BLAST of Cucsat.G6275 vs. ExPASy Swiss-Prot
Match: Q9JI13 (Something about silencing protein 10 OS=Mus musculus OX=10090 GN=Utp3 PE=1 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 7.8e-11 Identity = 47/130 (36.15%), Postives = 72/130 (55.38%), Query Frame = 0
BLAST of Cucsat.G6275 vs. ExPASy Swiss-Prot
Match: Q9I7W5 (Something about silencing protein 10 OS=Drosophila melanogaster OX=7227 GN=Sas10 PE=1 SV=2) HSP 1 Score: 67.4 bits (163), Expect = 3.0e-10 Identity = 51/166 (30.72%), Postives = 89/166 (53.61%), Query Frame = 0
BLAST of Cucsat.G6275 vs. ExPASy Swiss-Prot
Match: Q9NQZ2 (Something about silencing protein 10 OS=Homo sapiens OX=9606 GN=UTP3 PE=1 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 3.0e-10 Identity = 45/133 (33.83%), Postives = 74/133 (55.64%), Query Frame = 0
BLAST of Cucsat.G6275 vs. ExPASy Swiss-Prot
Match: Q6AXX4 (Something about silencing protein 10 OS=Rattus norvegicus OX=10116 GN=Utp3 PE=1 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 5.1e-10 Identity = 45/130 (34.62%), Postives = 73/130 (56.15%), Query Frame = 0
BLAST of Cucsat.G6275 vs. ExPASy Swiss-Prot
Match: Q12136 (Something about silencing protein 10 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=SAS10 PE=1 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 1.6e-08 Identity = 73/292 (25.00%), Postives = 136/292 (46.58%), Query Frame = 0
BLAST of Cucsat.G6275 vs. NCBI nr
Match: XP_011656741.1 (something about silencing protein 10 isoform X3 [Cucumis sativus] >KAE8646730.1 hypothetical protein Csa_005136 [Cucumis sativus]) HSP 1 Score: 522 bits (1345), Expect = 1.34e-180 Identity = 283/284 (99.65%), Postives = 283/284 (99.65%), Query Frame = 0
BLAST of Cucsat.G6275 vs. NCBI nr
Match: XP_011656742.1 (something about silencing protein 10 isoform X4 [Cucumis sativus]) HSP 1 Score: 521 bits (1341), Expect = 5.08e-180 Identity = 282/283 (99.65%), Postives = 282/283 (99.65%), Query Frame = 0
BLAST of Cucsat.G6275 vs. NCBI nr
Match: XP_011656738.1 (something about silencing protein 10 isoform X1 [Cucumis sativus]) HSP 1 Score: 515 bits (1327), Expect = 8.95e-178 Identity = 283/291 (97.25%), Postives = 283/291 (97.25%), Query Frame = 0
BLAST of Cucsat.G6275 vs. NCBI nr
Match: XP_011656740.1 (something about silencing protein 10 isoform X2 [Cucumis sativus]) HSP 1 Score: 514 bits (1323), Expect = 3.39e-177 Identity = 282/290 (97.24%), Postives = 282/290 (97.24%), Query Frame = 0
BLAST of Cucsat.G6275 vs. NCBI nr
Match: XP_008460015.1 (PREDICTED: something about silencing protein 10 isoform X2 [Cucumis melo]) HSP 1 Score: 482 bits (1240), Expect = 1.13e-164 Identity = 264/286 (92.31%), Postives = 270/286 (94.41%), Query Frame = 0
BLAST of Cucsat.G6275 vs. ExPASy TrEMBL
Match: A0A0A0KD76 (Sas10 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G087170 PE=3 SV=1) HSP 1 Score: 522 bits (1345), Expect = 2.70e-181 Identity = 283/284 (99.65%), Postives = 283/284 (99.65%), Query Frame = 0
BLAST of Cucsat.G6275 vs. ExPASy TrEMBL
Match: A0A1S3CBM7 (something about silencing protein 10 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498957 PE=3 SV=1) HSP 1 Score: 482 bits (1240), Expect = 5.45e-165 Identity = 264/286 (92.31%), Postives = 270/286 (94.41%), Query Frame = 0
BLAST of Cucsat.G6275 vs. ExPASy TrEMBL
Match: A0A1S3CCS3 (something about silencing protein 10 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498957 PE=3 SV=1) HSP 1 Score: 477 bits (1228), Expect = 3.68e-163 Identity = 264/287 (91.99%), Postives = 270/287 (94.08%), Query Frame = 0
BLAST of Cucsat.G6275 vs. ExPASy TrEMBL
Match: A0A5A7TE39 (Something about silencing protein 10 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G002010 PE=3 SV=1) HSP 1 Score: 476 bits (1224), Expect = 5.77e-163 Identity = 264/287 (91.99%), Postives = 270/287 (94.08%), Query Frame = 0
BLAST of Cucsat.G6275 vs. ExPASy TrEMBL
Match: A0A5D3DMP9 (Something about silencing protein 10 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G001240 PE=3 SV=1) HSP 1 Score: 476 bits (1224), Expect = 4.10e-162 Identity = 264/287 (91.99%), Postives = 270/287 (94.08%), Query Frame = 0
BLAST of Cucsat.G6275 vs. TAIR 10
Match: AT2G43650.1 (Sas10/U3 ribonucleoprotein (Utp) family protein ) HSP 1 Score: 197.6 bits (501), Expect = 1.4e-50 Identity = 134/278 (48.20%), Postives = 174/278 (62.59%), Query Frame = 0
BLAST of Cucsat.G6275 vs. TAIR 10
Match: AT3G28230.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: gene silencing; LOCATED IN: nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Something about silencing protein 10 (Sas10), C-terminal (InterPro:IPR018972); BEST Arabidopsis thaliana protein match is: Sas10/U3 ribonucleoprotein (Utp) family protein (TAIR:AT2G43650.1); Has 374 Blast hits to 360 proteins in 175 species: Archae - 0; Bacteria - 4; Metazoa - 107; Fungi - 115; Plants - 56; Viruses - 0; Other Eukaryotes - 92 (source: NCBI BLink). ) HSP 1 Score: 114.8 bits (286), Expect = 1.2e-25 Identity = 79/165 (47.88%), Postives = 106/165 (64.24%), Query Frame = 0
BLAST of Cucsat.G6275 vs. TAIR 10
Match: AT3G28230.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: gene silencing; LOCATED IN: nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Something about silencing protein 10 (Sas10), C-terminal (InterPro:IPR018972); BEST Arabidopsis thaliana protein match is: Sas10/U3 ribonucleoprotein (Utp) family protein (TAIR:AT2G43650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 114.8 bits (286), Expect = 1.2e-25 Identity = 77/154 (50.00%), Postives = 100/154 (64.94%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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