Cucsat.G5655.T14 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AGTTCATAAGATACTAAAGGAAATGCAAGACCATAGCATAGACTTAGTCCTCTTTTGCTTTCTTAATTCTTACCAAATATGAAATAATATGCAGAGATCTCAAGATATGTTTCCGATGTCCCGCCTGCTCATTACACAGTCAAGATAGAGTCCTTTTCATTGTTAACAAAGAACTCGGTGGATCAGTTTGAATCCGGGGAGTTCGAGGCAGGTGGCTACAAATGGTAAATGATATTCCTTCAGACTCTTCATCTTCTTCATAAATTTTGAGGCTTGAGCTTGCACTACATTGTCATATAAACATGGAATGTTCTTGCAGGAAATTGGTACTCCATCCACATGGTGACAAAAGCAAGAATGGGAATGACCACATCTCTCTCTATTTAGAGATTGCGGGGACTGATTCCCTCCAACCGAGTTGGGAAGTGTTCGTTGTTTACCGACTCTTTTTGCTCGATCAGAACAAGGATAACTACCTCACAGTTGAAGGTATATCTTCCCTTCCCTTCAAGAAATAAGCCGTTGCATGTATGCAATATAACAATATCTGTAAAATGAAGATGGCAAGTGGAAGCCGAGGCGGTTTCGAGGAATGAAGAAACAATGGGGTTTCGATAAATACATTAGCCTAAAAGAATTCAAGGAGTCCTCCAACGGGTATCTGGTAGATGATGTCTGTGTGTTTGGAGCTGAGGTTTTTGTCTGCAAGGAAAATTTCAAAGGAGGCAAGGGGGAATGTTTATCAATGATAAAGAGTCCCGTTACTTACAAGCATGTTTGGAAAATTGACAACTTCTCCAAGTTAGATGCTGAGAGCTATGAGTCCAAAATTTTCAACGCAGGGGATAAAAAATGGTATCCATCTACTTTTCACACATTCTGATAATTAACTGACCGGGTTTGAAGCTGGATTAATTTGATGATGGGTAAACACACGTATTAATTGTGATGTTGCAGGAAAATTCGAGTGTATCCAAAGGGCCATGGCAGTGGTGAAGGCAGCCATCTTTCCCCATATCTGGAACTGGCAGATCCTGCTGCGCTGCATCCTGCAACCAAAATATATGCAGAGGTAACGTTGCGCCTGCAAGATCAGATTTACTCAAAGCATCATTCTGGAAAAGGTAAAAATACATAATCACAATGACTCACATGGTCAGATACAAACTATTCAGTTTTAACACAATGGCAAGGATTTTTTTTGTTTTGTTATTGGCAGTTTCATATTGGTTTAGTGCGTCAAACCCAGAAGTTGGGGGCCCAAGATTCATTCTCTTAGACAATTTCAAACAACCTAACATCGGTTTTCTGGTGAAGGACGCTTTCATTGTTGAAGCAGAGGTCAACGTCATTGGAGTGGCCAATGCATTCTCTTGAACACCCTCCTGTGCTCTGTTGCAAAACTATAACTAACATCATATTATTCTCAGCCCTTGTACTTTACGTGTAAACAAATTACCGGTCACGATCTTGACTTTAAGTAGACAGATTTATCATGGAGGCCAACAGAATTTTATGAAACAATTGTATACATACAATATACCATTGAAATTGATATGATTTGGTTACAATCGGAAACTCATTAACATTTCATCATCTCAAGATGTCTTGAACAACTGTGATATTGTTTAAATTTTTTGGGGCGAAAGCCACAAGGAGCCAATGTCAATCATTGCTCGCTAGAATATTGTGCCCTTGTAAGCAAATAGCTTGCATGGCCATAGAATGACAGGTGGCCACCGAGTGCAAACTTGCGAGTCTCCTATGCTTTCTCACTCCATGCCAATTTGTCCAGAACAAAAAGCAAGTTCACCTAAAACTAAAATAACTAGAATTGGGAGACACTAATACTGATTAGCATCATTGTCACCAAAAGCTCTATACATAAAATCCAGTTAACCACAAACTTCCCACAGAAATAATATTTGCCTGAAGGATCATCAAAACACTACGGTGAAAAACTCGGCACAGAGGATGCGATATGAAAGGTGGATTTGATCTCCTGAGATGTATCCATTGTAGCGATTTAACAGACTGGGGGATAGAGGATAGAGCCCTCGGTGGATCAGGCACAGTGTAGGGTCCAAGCTCCCAAACATGCACCAATTTTGCATTCGACTTCGTTGCACGCAATCACTCATTGTTAGAAGCATTATCAATCACCTGTTTCTTTTCCAGCTCCAAGTAATGAACTCTATCATTCATGCCTTCTTTTCCATATGCTTCCATCATAATAGAATATGTTTTGTTATCTGGCTGACAATGTTTATCTTTCATTCGCTTAAATACTCTGTCCATTTCCATCAAATCCTCAGCCTTAGCACATGCAGATATAACTGCATTATAAAATGAGGTATTCTCTGGAATCTCGAGTTTTCCTGCCAACTTAACTGAACCAATTACCTTATGGAAAAGACCTGCATTAGCATATCCATTTATAAGGCAACAGAATGTCTTGGTGTCTGCTCTCATGCCCTCAGCACGCATCTGCTCAAATGTGTACTCCATGTTCTTTGCATCTCCCACATCCGCAAAAGCTTCAATCACGTTGTTGTATGTTGATGTCGTCCAAGGAAACTGCAGTTTGCGCATATACTCCATCACAGAAGACATTTTATCGTACATCCTCTTCTTCCCATAAGCACCAATCAAAATATTAAATGTACGTGTTTCTGGCTCAATACCAAAGTTACGAAACTTCTCATACCATCTTTCCATCATTTCAATATGTCCCTTATTACCAAACACACTTAGAATTATATTCATTGTCCACACATCTGGTCTACAAGTTGTGCTCTCTAGCATTCCTATTAAAACTTTCTCCATTTGGTCATACTTCCCTATCTTGCCATATCCACTTAATACTATGTTCTGGGTTACTGTATTTGGAGTTATCAGTCGTTCGGCCATTTCCTCATACAATGATTCAACTATTTCAAAGCGAGAATCATCGACACAAGCCTTGATCAAGATACTATAAGTGTAGACATCAGGTTGGCAGCGAGGGAGGGTCTTCATGAGATTGAGAGTGGAAAATGCATCATCAATGAGATTGTTCCGACAATATGCAGCAAGCAAAGCAGTGTAAAGTTCAGGGGTAGGTTCACATCTTTCTTGAACCATTGTATCAAAAAGCAGACGTGCACGGTGTGGTTGGCCAGACCTTCCAAGTAGAACAAGCAGCTTCATGTAAGTTCCTTCTTTTGGTTCATAAAATGGTTGTTCGCGGAGCATTTCAAACACCTGAAGGTTGAATAAAGCAGCCACAATTGTTATAGGTAAAAACAACAGCACAAAAAATTCATACACTCTTGAAATCATCAATTCGTTCCTTCAAATTAACGCACATAAAGATGAATGTTCATGTTTCAAATTCAACTTTAAAGAGCATGTAACGAATCTCCCTTAAATCCCCAAATATGCATTTTTTTCTCTTTGTCCATAAACGGAAAAAAAATGCTAATTCCAGCGCACATTGCAAAAGTACACAAACCCAAGATTGATTTTGTCTCAAATAAATTAAATCATTGAGCATAATCCAAGAACAAGTAACAAAAAGTTGGGAGTCCAGAACAAACATAAAACAACCCAAAACGAGAAATGAAATTAAAGAAAAAGAAACCGACCTCAAGAGCTTGAAGCCACCGTTTGTTCGTGATATGGTCAGACAAGGCTTCAGTGACGGTGTTGGCCCAAGCCTTAGCATTATTCTTCCGGTCTAGTTTCTTTTTGACTCTCTTGAGAGGGGCCCTCCTGCGGGTGGATGTCTCTGTAGTTCCTGGAAATTCCCCTTGCTTCCAGTGCCTCTTCTTAGCAGGTGAGGAGGAAGTAGATGGAACAGGGGATTTTCTAGTGGGAGCCGCAAATGCACAGCGAACAATGCGAGAGTTGGGATGTGAAGAAGAAGAACAAGAAGAAGAAACAAAGATGGGGAAAAGGAAAGTGGAGACATGATCGAAAGAGACTGAAGAAGGAAGGAGCGAGGAGGAGAAGGAGAAAGAAGCCATAGTTAAGCTGCAAGGCTGATGGTAG ATGAAGAAACAATGGGGTTTCGATAAATACATTAGCCTAAAAGAATTCAAGGAGTCCTCCAACGGGTATCTGGTAGATGATGTCTGTGTGTTTGGAGCTGAGGTTTTTGTCTGCAAGGAAAATTTCAAAGGAGGCAAGGGGGAATGTTTATCAATGATAAAGAGTCCCGTTACTTACAAGCATGTTTGGAAAATTGACAACTTCTCCAAGTTAGATGCTGAGAGCTATGAGTCCAAAATTTTCAACGCAGGGGATAAAAAATGGAAAATTCGAGTGTATCCAAAGGGCCATGGCAGTGGTGAAGGCAGCCATCTTTCCCCATATCTGGAACTGGCAGATCCTGCTGCGCTGCATCCTGCAACCAAAATATATGCAGAGGTAACGTTGCGCCTGCAAGATCAGATTTACTCAAAGCATCATTCTGGAAAAGTTTCATATTGGTTTAGTGCGTCAAACCCAGAAGTTGGGGGCCCAAGATTCATTCTCTTAGACAATTTCAAACAACCTAACATCGGTTTTCTGGTGAAGGACGCTTTCATTGTTGAAGCAGAGGTCAACGTCATTGGAGTGGCCAATGCATTCTCTTGA MKKQWGFDKYISLKEFKESSNGYLVDDVCVFGAEVFVCKENFKGGKGECLSMIKSPVTYKHVWKIDNFSKLDAESYESKIFNAGDKKWKIRVYPKGHGSGEGSHLSPYLELADPAALHPATKIYAEVTLRLQDQIYSKHHSGKVSYWFSASNPEVGGPRFILLDNFKQPNIGFLVKDAFIVEAEVNVIGVANAFS Homology
BLAST of Cucsat.G5655.T14 vs. ExPASy Swiss-Prot
Match: Q9FPT1 (Ubiquitin C-terminal hydrolase 12 OS=Arabidopsis thaliana OX=3702 GN=UBP12 PE=1 SV=2) HSP 1 Score: 85.5 bits (210), Expect = 7.3e-16 Identity = 49/143 (34.27%), Postives = 79/143 (55.24%), Query Frame = 0
BLAST of Cucsat.G5655.T14 vs. ExPASy Swiss-Prot
Match: Q84WU2 (Ubiquitin C-terminal hydrolase 13 OS=Arabidopsis thaliana OX=3702 GN=UBP13 PE=1 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 5.2e-14 Identity = 45/143 (31.47%), Postives = 77/143 (53.85%), Query Frame = 0
BLAST of Cucsat.G5655.T14 vs. ExPASy Swiss-Prot
Match: Q9M2J5 (MATH domain and coiled-coil domain-containing protein At3g58210 OS=Arabidopsis thaliana OX=3702 GN=At3g58210 PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 5.8e-13 Identity = 51/140 (36.43%), Postives = 66/140 (47.14%), Query Frame = 0
BLAST of Cucsat.G5655.T14 vs. ExPASy Swiss-Prot
Match: Q9M2I2 (MATH domain and coiled-coil domain-containing protein At3g58340 OS=Arabidopsis thaliana OX=3702 GN=At3g58340 PE=4 SV=3) HSP 1 Score: 63.2 bits (152), Expect = 3.9e-09 Identity = 41/135 (30.37%), Postives = 65/135 (48.15%), Query Frame = 0
BLAST of Cucsat.G5655.T14 vs. ExPASy Swiss-Prot
Match: Q9M2H5 (MATH domain and coiled-coil domain-containing protein At3g58410 OS=Arabidopsis thaliana OX=3702 GN=At3g58410 PE=4 SV=2) HSP 1 Score: 62.8 bits (151), Expect = 5.0e-09 Identity = 40/130 (30.77%), Postives = 61/130 (46.92%), Query Frame = 0
BLAST of Cucsat.G5655.T14 vs. NCBI nr
Match: KAE8646541.1 (hypothetical protein Csa_005108 [Cucumis sativus]) HSP 1 Score: 403 bits (1035), Expect = 1.03e-140 Identity = 193/195 (98.97%), Postives = 195/195 (100.00%), Query Frame = 0
BLAST of Cucsat.G5655.T14 vs. NCBI nr
Match: XP_004138521.1 (uncharacterized protein LOC101206506 [Cucumis sativus]) HSP 1 Score: 403 bits (1035), Expect = 5.60e-140 Identity = 193/195 (98.97%), Postives = 195/195 (100.00%), Query Frame = 0
BLAST of Cucsat.G5655.T14 vs. NCBI nr
Match: XP_008458292.1 (PREDICTED: uncharacterized protein LOC103497755 [Cucumis melo]) HSP 1 Score: 377 bits (968), Expect = 8.84e-130 Identity = 182/195 (93.33%), Postives = 187/195 (95.90%), Query Frame = 0
BLAST of Cucsat.G5655.T14 vs. NCBI nr
Match: XP_038875826.1 (uncharacterized protein LOC120068190 [Benincasa hispida]) HSP 1 Score: 353 bits (905), Expect = 3.18e-120 Identity = 167/195 (85.64%), Postives = 182/195 (93.33%), Query Frame = 0
BLAST of Cucsat.G5655.T14 vs. NCBI nr
Match: XP_023514867.1 (uncharacterized protein LOC111779045 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 348 bits (894), Expect = 1.60e-118 Identity = 163/195 (83.59%), Postives = 179/195 (91.79%), Query Frame = 0
BLAST of Cucsat.G5655.T14 vs. ExPASy TrEMBL
Match: A0A0A0K9U9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G000670 PE=4 SV=1) HSP 1 Score: 403 bits (1035), Expect = 2.71e-140 Identity = 193/195 (98.97%), Postives = 195/195 (100.00%), Query Frame = 0
BLAST of Cucsat.G5655.T14 vs. ExPASy TrEMBL
Match: A0A1S3C7I4 (uncharacterized protein LOC103497755 OS=Cucumis melo OX=3656 GN=LOC103497755 PE=4 SV=1) HSP 1 Score: 377 bits (968), Expect = 4.28e-130 Identity = 182/195 (93.33%), Postives = 187/195 (95.90%), Query Frame = 0
BLAST of Cucsat.G5655.T14 vs. ExPASy TrEMBL
Match: A0A5D3BTJ2 (Protein GFS12 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G00700 PE=4 SV=1) HSP 1 Score: 377 bits (968), Expect = 1.22e-117 Identity = 182/195 (93.33%), Postives = 187/195 (95.90%), Query Frame = 0
BLAST of Cucsat.G5655.T14 vs. ExPASy TrEMBL
Match: A0A6J1CEA8 (uncharacterized protein LOC111009925 OS=Momordica charantia OX=3673 GN=LOC111009925 PE=4 SV=1) HSP 1 Score: 343 bits (881), Expect = 7.36e-117 Identity = 160/195 (82.05%), Postives = 180/195 (92.31%), Query Frame = 0
BLAST of Cucsat.G5655.T14 vs. ExPASy TrEMBL
Match: A0A6J1KI45 (uncharacterized protein LOC111494157 OS=Cucurbita maxima OX=3661 GN=LOC111494157 PE=4 SV=1) HSP 1 Score: 341 bits (875), Expect = 6.01e-116 Identity = 160/195 (82.05%), Postives = 177/195 (90.77%), Query Frame = 0
BLAST of Cucsat.G5655.T14 vs. TAIR 10
Match: AT3G17380.1 (TRAF-like family protein ) HSP 1 Score: 219.5 bits (558), Expect = 2.3e-57 Identity = 102/193 (52.85%), Postives = 137/193 (70.98%), Query Frame = 0
BLAST of Cucsat.G5655.T14 vs. TAIR 10
Match: AT5G26260.1 (TRAF-like family protein ) HSP 1 Score: 112.5 bits (280), Expect = 3.9e-25 Identity = 69/195 (35.38%), Postives = 96/195 (49.23%), Query Frame = 0
BLAST of Cucsat.G5655.T14 vs. TAIR 10
Match: AT5G26280.1 (TRAF-like family protein ) HSP 1 Score: 101.7 bits (252), Expect = 7.0e-22 Identity = 65/195 (33.33%), Postives = 93/195 (47.69%), Query Frame = 0
BLAST of Cucsat.G5655.T14 vs. TAIR 10
Match: AT5G26280.2 (TRAF-like family protein ) HSP 1 Score: 101.7 bits (252), Expect = 7.0e-22 Identity = 65/195 (33.33%), Postives = 93/195 (47.69%), Query Frame = 0
BLAST of Cucsat.G5655.T14 vs. TAIR 10
Match: AT2G32870.1 (TRAF-like family protein ) HSP 1 Score: 100.5 bits (249), Expect = 1.6e-21 Identity = 63/200 (31.50%), Postives = 97/200 (48.50%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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