Cucsat.G5655.T10 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATAAACTACATAAAGATGATAGTTTGGGATGACTCATGCAGCCTCATAATCTAATCAACTATAATTCCTTGTGTTGTATAGGGTTTTTTTCCTTGTAATGGCCAATCTCATTGGTGACGATATAGACGGTATCGCTCTCTCCACCCTTCCTCACACCATTTTAACCGTTTATTTTGAAAGCATCGAAAATTTTAATGTCATGCTTGATCTTTTATTTAATATTTTAAAAGTATCGTTGAAGTAGAAATTTGTAAGAATGTTGAATGAAAATTGAAAACTAGAATGTAGGACGATATCTAGGTTTCATTTTTCATTCTAGGGCAATCGATACCATTCTAATTCAGTTTTAACACATTCTAAGAGTTTTACGGTCTAAGAGTAGTTTTGAACGTTTGTGAATGGCAATGGCAAAGTGTAGAGAAGTGTTTTTGAAGTAAAGGACAATTTTCTTTTTGTTGTTGTAATTTACCAAGAATTTATATACACTATAAGGTGTTCCCTGTTCTCTACTGAATGCGAAAGGATTGTCTTTACACAGCACAACGTGAGACTAATTCAATTTCAACATGGAAAAATAGGGAATGGAAGCACTATTGCACACAGTAATTTCAACAAATTCTATGTTAAAAACGAATGCACTTATCAGAGTTCATAAGATACTAAAGGAAATGCAAGACCATAGCATAGACTTAGTCCTCTTTTGCTTTCTTAATTCTTACCAAATATGAAATAATATGCAGAGATCTCAAGATATGTTTCCGATGTCCCGCCTGCTCATTACACAGTCAAGATAGAGTCCTTTTCATTGTTAACAAAGAACTCGGTGGATCAGTTTGAATCCGGGGAGTTCGAGGCAGGTGGCTACAAATGGTAAATGATATTCCTTCAGACTCTTCATCTTCTTCATAAATTTTGAGGCTTGAGCTTGCACTACATTGTCATATAAACATGGAATGTTCTTGCAGGAAATTGGTACTCCATCCACATGGTGACAAAAGCAAGAATGGGAATGACCACATCTCTCTCTATTTAGAGATTGCGGGGACTGATTCCCTCCAACCGAGTTGGGAAGTGTTCGTTGTTTACCGACTCTTTTTGCTCGATCAGAACAAGGATAACTACCTCACAGTTGAAGGTATATCTTCCCTTCCCTTCAAGAAATAAGCCGTTGCATGTATGCAATATAACAATATCTGTAAAATGAAGATGGCAAGTGGAAGCCGAGGCGGTTTCGAGGAATGAAGAAACAATGGGGTTTCGATAAATACATTAGCCTAAAAGAATTCAAGGAGTCCTCCAACGGGTATCTGGTAGATGATGTCTGTGTGTTTGGAGCTGAGGTTTTTGTCTGCAAGGAAAATTTCAAAGGAGGCAAGGGGGAATGTTTATCAATGATAAAGAGTCCCGTTACTTACAAGCATGTTTGGAAAATTGACAACTTCTCCAAGTTAGATGCTGAGAGCTATGAGTCCAAAATTTTCAACGCAGGGGATAAAAAATGGTATCCATCTACTTTTCACACATTCTGATAATTAACTGACCGGGTTTGAAGCTGGATTAATTTGATGATGGGTAAACACACGTATTAATTGTGATGTTGCAGGAAAATTCGAGTGTATCCAAAGGGCCATGGCAGTGGTGAAGGCAGCCATCTTTCCCCATATCTGGAACTGGCAGATCCTGCTGCGCTGCATCCTGCAACCAAAATATATGCAGAGGTAACGTTGCGCCTGCAAGATCAGATTTACTCAAAGCATCATTCTGGAAAAGGTAAAAATACATAATCACAATGACTCACATGGTCAGATACAAACTATTCAGTTTTAACACAATGGCAAGGATTTTTTTTGTTTTGTTATTGGCAGTTTCATATTGGTTTAGTGCGTCAAACCCAGAAGTTGGGGGCCCAAGATTCATTCTCTTAGACAATTTCAAACAACCTAACATCGGTTTTCTGGTGAAGGACGCTTTCATTGTTGAAGCAGAGGTCAACGTCATTGGAGTGGCCAATGCATTCTCTTGAACACCCTCCTGTGCTCTGTTGCAAAACTATAACTAACATCATATTATTCTCAGCCCTTGTACTTTACGTGTAAACAAATTACCGGTCACGATCTTGACTTTAAGTAGACAGATTTATCATGGAGGCCAACAGAATTTTATGAAACAATTGTATACATACAATATACCATTGAAATTGATATGATTTGGTTACAATCGGAAACTCATTAACATTTCATCATCTCAAGATGTCTTGAACAACTGTGATATTGTTTAAATTTTTTGGGGCGAAAGCCACAAGGAGCCAATGTCAATCATTGCTCGCTAGAATATTGTGCCCTTGTAAGCAAATAGCTTGCATGGCCATAGAATGACAGGTGGCCACCGAGTGCAAACTTGCGAGTCTCCTATGCTTTCTCACTCCATGCCAATTTGTCCAGAACAAAAAGCAAGTTCACCTAAAACTAAAATAACTAGAATTGGGAGACACTAATACTGATTAGCATCATTGTCACCAAAAGCTCTATACATAAAATCCAGTTAACCACAAACTTCCCACAGAAATAATATTTGCCTGAAGGATCATCAAAACACTACGGTGAAAAACTCGGCACAGAGGATGCGATATGAAAGGTGGATTTGATCTCCTGAGATGTATCCATTGTAGCGATTTAACAGACTGGGGGATAGAGGATAGAGCCCTCGGTGGATCAGGCACAGTGTAGGGTCCAAGCTCCCAAACATGCACCAATTTTGCATTCGACTTCGTTGCACGCAATCACTCATTGTTAGAAGCATTATCAATCACCTGTTTCTTTTCCAGCTCCAAGTAATGAACTCTATCATTCATGCCTTCTTTTCCATATGCTTCCATCATAATAGAATATGTTTTGTTATCTGGCTGACAATGTTTATCTTTCATTCGCTTAAATACTCTGTCCATTTCCATCAAATCCTCAGCCTTAGCACATGCAGATATAACTGCATTATAAAATGAGGTATTCTCTGGAATCTCGAGTTTTCCTGCCAACTTAACTGAACCAATTACCTTATGGAAAAGACCTGCATTAGCATATCCATTTATAAGGCAACAGAATGTCTTGGTGTCTGCTCTCATGCCCTCAGCACGCATCTGCTCAAATGTGTACTCCATGTTCTTTGCATCTCCCACATCCGCAAAAGCTTCAATCACGTTGTTGTATGTTGATGTCGTCCAAGGAAACTGCAGTTTGCGCATATACTCCATCACAGAAGACATTTTATCGTACATCCTCTTCTTCCCATAAGCACCAATCAAAATATTAAATGTACGTGTTTCTGGCTCAATACCAAAGTTACGAAACTTCTCATACCATCTTTCCATCATTTCAATATGTCCCTTATTACCAAACACACTTAGAATTATATTCATTGTCCACACATCTGGTCTACAAGTTGTGCTCTCTAGCATTCCTATTAAAACTTTCTCCATTTGGTCATACTTCCCTATCTTGCCATATCCACTTAATACTATGTTCTGGGTTACTGTATTTGGAGTTATCAGTCGTTCGGCCATTTCCTCATACAATGATTCAACTATTTCAAAGCGAGAATCATCGACACAAGCCTTGATCAAGATACTATAAGTGTAGACATCAGGTTGGCAGCGAGGGAGGGTCTTCATGAGATTGAGAGTGGAAAATGCATCATCAATGAGATTGTTCCGACAATATGCAGCAAGCAAAGCAGTGTAAAGTTCAGGGGTAGGTTCACATCTTTCTTGAACCATTGTATCAAAAAGCAGACGTGCACGGTGTGGTTGGCCAGACCTTCCAAGTAGAACAAGCAGCTTCATGTAAGTTCCTTCTTTTGGTTCATAAAATGGTTGTTCGCGGAGCATTTCAAACACCTGAAGGTTGAATAAAGCAGCCACAATTGTTATAGGTAAAAACAACAGCACAAAAAATTCATACACTCTTGAAATCATCAATTCGTTCCTTCAAATTAACGCACATAAAGATGAATGTTCATGTTTCAAATTCAACTTTAAAGAGCATGTAACGAATCTCCCTTAAATCCCCAAATATGCATTTTTTTCTCTTTGTCCATAAACGGAAAAAAAATGCTAATTCCAGCGCACATTGCAAAAGTACACAAACCCAAGATTGATTTTGTCTCAAATAAATTAAATCATTGAGCATAATCCAAGAACAAGTAACAAAAAGTTGGGAGTCCAGAACAAACATAAAACAACCCAAAACGAGAAATGAAATTAAAGAAAAAGAAACCGACCTCAAGAGCTTGAAGCCACCGTTTGTTCGTGATATGGTCAGACAAGGCTTCAGTGACGGTGTTGGCCCAAGCCTTAGCATTATTCTTCCGGTCTAGTTTCTTTTTGACTCTCTTGAGAGGGGCCCTCCTGCGGGTGGATGTCTCTGTAGTTCCTGGAAATTCCCCTTGCTTCCAGTGCCTCTTCTTAGCAGGTGAGGAGGAAGTAGATGGAACAGGGGATTTTCTAGTGGGAGCCGCAAATGCACAGCGAACAATGCGAGAGTTGGGATGTGAAGAAGAAGAACAAGAAGAAGAAACAAAGATGGGGAAAAGGAAAGTGGAGACATGATCGAAAGAGACTGAAGAAGGAAGGAGCGAGGAGGAGAAGGAGAAAGAAGCCATAGTTAAGCTGCAAGGCTGATGGTA ATGAAGAAACAATGGGGTTTCGATAAATACATTAGCCTAAAAGAATTCAAGGAGTCCTCCAACGGGTATCTGGTAGATGATGTCTGTGTGTTTGGAGCTGAGGTTTTTGTCTGCAAGGAAAATTTCAAAGGAGGCAAGGGGGAATGTTTATCAATGATAAAGAGTCCCGTTACTTACAAGCATGTTTGGAAAATTGACAACTTCTCCAAGTTAGATGCTGAGAGCTATGAGTCCAAAATTTTCAACGCAGGGGATAAAAAATGGAAAATTCGAGTGTATCCAAAGGGCCATGGCAGTGGTGAAGGCAGCCATCTTTCCCCATATCTGGAACTGGCAGATCCTGCTGCGCTGCATCCTGCAACCAAAATATATGCAGAGGTAACGTTGCGCCTGCAAGATCAGATTTACTCAAAGCATCATTCTGGAAAAGGTAAAAATACATAA MKKQWGFDKYISLKEFKESSNGYLVDDVCVFGAEVFVCKENFKGGKGECLSMIKSPVTYKHVWKIDNFSKLDAESYESKIFNAGDKKWKIRVYPKGHGSGEGSHLSPYLELADPAALHPATKIYAEVTLRLQDQIYSKHHSGKGKNT Homology
BLAST of Cucsat.G5655.T10 vs. ExPASy Swiss-Prot
Match: Q9FPT1 (Ubiquitin C-terminal hydrolase 12 OS=Arabidopsis thaliana OX=3702 GN=UBP12 PE=1 SV=2) HSP 1 Score: 63.2 bits (152), Expect = 2.9e-09 Identity = 30/86 (34.88%), Postives = 51/86 (59.30%), Query Frame = 0
BLAST of Cucsat.G5655.T10 vs. ExPASy Swiss-Prot
Match: Q9M2J5 (MATH domain and coiled-coil domain-containing protein At3g58210 OS=Arabidopsis thaliana OX=3702 GN=At3g58210 PE=4 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 7.9e-07 Identity = 30/78 (38.46%), Postives = 40/78 (51.28%), Query Frame = 0
BLAST of Cucsat.G5655.T10 vs. ExPASy Swiss-Prot
Match: Q9M2H5 (MATH domain and coiled-coil domain-containing protein At3g58410 OS=Arabidopsis thaliana OX=3702 GN=At3g58410 PE=4 SV=2) HSP 1 Score: 52.8 bits (125), Expect = 3.9e-06 Identity = 27/76 (35.53%), Postives = 42/76 (55.26%), Query Frame = 0
BLAST of Cucsat.G5655.T10 vs. ExPASy Swiss-Prot
Match: Q9M2I2 (MATH domain and coiled-coil domain-containing protein At3g58340 OS=Arabidopsis thaliana OX=3702 GN=At3g58340 PE=4 SV=3) HSP 1 Score: 48.1 bits (113), Expect = 9.7e-05 Identity = 27/79 (34.18%), Postives = 43/79 (54.43%), Query Frame = 0
BLAST of Cucsat.G5655.T10 vs. NCBI nr
Match: KAE8646541.1 (hypothetical protein Csa_005108 [Cucumis sativus]) HSP 1 Score: 303 bits (775), Expect = 5.65e-102 Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0
BLAST of Cucsat.G5655.T10 vs. NCBI nr
Match: XP_004138521.1 (uncharacterized protein LOC101206506 [Cucumis sativus]) HSP 1 Score: 303 bits (775), Expect = 2.80e-101 Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0
BLAST of Cucsat.G5655.T10 vs. NCBI nr
Match: XP_008458292.1 (PREDICTED: uncharacterized protein LOC103497755 [Cucumis melo]) HSP 1 Score: 283 bits (723), Expect = 2.22e-93 Identity = 134/143 (93.71%), Postives = 137/143 (95.80%), Query Frame = 0
BLAST of Cucsat.G5655.T10 vs. NCBI nr
Match: XP_023514867.1 (uncharacterized protein LOC111779045 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 265 bits (676), Expect = 3.03e-86 Identity = 121/143 (84.62%), Postives = 132/143 (92.31%), Query Frame = 0
BLAST of Cucsat.G5655.T10 vs. NCBI nr
Match: KAG6594036.1 (Ubiquitin carboxyl-terminal hydrolase 12, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 265 bits (676), Expect = 3.03e-86 Identity = 121/143 (84.62%), Postives = 132/143 (92.31%), Query Frame = 0
BLAST of Cucsat.G5655.T10 vs. ExPASy TrEMBL
Match: A0A0A0K9U9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G000670 PE=4 SV=1) HSP 1 Score: 303 bits (775), Expect = 1.35e-101 Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0
BLAST of Cucsat.G5655.T10 vs. ExPASy TrEMBL
Match: A0A1S3C7I4 (uncharacterized protein LOC103497755 OS=Cucumis melo OX=3656 GN=LOC103497755 PE=4 SV=1) HSP 1 Score: 283 bits (723), Expect = 1.08e-93 Identity = 134/143 (93.71%), Postives = 137/143 (95.80%), Query Frame = 0
BLAST of Cucsat.G5655.T10 vs. ExPASy TrEMBL
Match: A0A5D3BTJ2 (Protein GFS12 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G00700 PE=4 SV=1) HSP 1 Score: 283 bits (723), Expect = 2.03e-85 Identity = 134/143 (93.71%), Postives = 137/143 (95.80%), Query Frame = 0
BLAST of Cucsat.G5655.T10 vs. ExPASy TrEMBL
Match: A0A6J1CEA8 (uncharacterized protein LOC111009925 OS=Momordica charantia OX=3673 GN=LOC111009925 PE=4 SV=1) HSP 1 Score: 260 bits (665), Expect = 6.83e-85 Identity = 118/143 (82.52%), Postives = 133/143 (93.01%), Query Frame = 0
BLAST of Cucsat.G5655.T10 vs. ExPASy TrEMBL
Match: A0A6J1ERJ3 (uncharacterized protein LOC111436929 OS=Cucurbita moschata OX=3662 GN=LOC111436929 PE=4 SV=1) HSP 1 Score: 257 bits (657), Expect = 1.08e-83 Identity = 119/143 (83.22%), Postives = 131/143 (91.61%), Query Frame = 0
BLAST of Cucsat.G5655.T10 vs. TAIR 10
Match: AT3G17380.1 (TRAF-like family protein ) HSP 1 Score: 177.2 bits (448), Expect = 9.8e-45 Identity = 80/143 (55.94%), Postives = 104/143 (72.73%), Query Frame = 0
BLAST of Cucsat.G5655.T10 vs. TAIR 10
Match: AT5G26260.1 (TRAF-like family protein ) HSP 1 Score: 88.6 bits (218), Expect = 4.6e-18 Identity = 51/138 (36.96%), Postives = 69/138 (50.00%), Query Frame = 0
BLAST of Cucsat.G5655.T10 vs. TAIR 10
Match: AT4G01390.1 (TRAF-like family protein ) HSP 1 Score: 81.3 bits (199), Expect = 7.3e-16 Identity = 46/135 (34.07%), Postives = 71/135 (52.59%), Query Frame = 0
BLAST of Cucsat.G5655.T10 vs. TAIR 10
Match: AT2G04170.1 (TRAF-like family protein ) HSP 1 Score: 79.3 bits (194), Expect = 2.8e-15 Identity = 46/138 (33.33%), Postives = 67/138 (48.55%), Query Frame = 0
BLAST of Cucsat.G5655.T10 vs. TAIR 10
Match: AT2G04170.2 (TRAF-like family protein ) HSP 1 Score: 79.3 bits (194), Expect = 2.8e-15 Identity = 46/138 (33.33%), Postives = 67/138 (48.55%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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