Cucsat.G4321.T4 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TAAAGAAAAATAAAGGGGGCAGATCGGGATCCAAAAATCCAAATGTCCAAATGCCCCAAGAAGAATCTCAAATTTACTCAAAACAAATCCAAATCCCTTTTTTCTTTTCTGTGTGTGTATATATATATAATCATCTTCTCCATTCTCTTCGCTCCAAGTCTAACCCAAGTCCTTCCCTCTCTCTCTCTCTCTGATTGAAGCTTTTGCAGCTTTGTTAATTGGTCAACAATGGCGGGAGCTTCGGTCAAACCCACTCCCCTTTTGAAAGATGAACTTGATATTGTCATCCCCACGATCCGAAACCTTGATTTCTTGGAGATGTGGAGACCCTTTTTCGAGCAATATCATTTGATCATTGTTCAAGATGGGGACCCTTCAAAGACTATCAAGGTTCCAGAAGGATTCGACTATGAACTCTACAATCGGAATGATATCAATCGGATTCTGGGTCCCAAGGCCTCTTGCATTTCATTTAAGGATTCTGCTTGTCGATGCTTTGGCTATATGGTTTCCAAGAAGAAGTACATCTTCACAATTGATGATGATTGCTTTGTAAGATCTGCTTGATTTTGCTTTTTGGAGTTTTCTTGTGCTTGATTTTTTGATTTACTTGTGTTCTGTGTTCATAGGGATGTCCAGTGTTTTGTAGATCTACTTGTTTGTTTGATTGTTGCAATGAGCTTTTTATTTCGGGGGGTTGTTCTGGATTTTCATGTTCTGACTTCTTCATGTGGTTGTTCAATTATGCTTTTCCTTTCATTCCCTTGATTCTTTTTTTTTTCTTTTCTGAATTTGACAAGCTCCGTTTGTTAACCCTTTGTTTTTTTTTTAAATAAAGCTTATAAACACTAATCATACCATGTTTTCATTCTGTTGTAGTCTACTCTTTGGGAGTGAATATTCAAAATCCAAGTTAAGGTTTGACAACTATAAAATAAAATTAGTTTTTTTAGATTTTGGATGTAAATTCAAATGTGTTGTGAAAACTAGTATACTTTTCAAAAACCAAATAGTTGTCGAACAGGTTTCGGTCTTAGCGATTGATGACTTGTGTGGTCAACCCGGTTCTCTTGCAAAATTGTTAACTGCTGTTGAATTTGTATATGCGAGGGAGAAACAGATCTTGTTGAAATGCTTGTTTGTTTGAAACAGTTCTTTTGATCCAACGAAACATAAGCTTCTTTAAATGAGTCCCAAGCAACCCCTTTTATCTTCTGGTCAATATTAGTAGGGAGAATGAATTTACTTTAATCTTTCCGTTTAAGCAGCAATAGCATTTGGTTTAATGGTTATTTTGTGAATGACGTTGGCCTTCTATACCACCCTGTGGTTTACATCTTTTGTTACCGATGAGTGGTTGAGAAGTACCTGTTGCTGACTGAGAGAATGGGATGGAAGTGATTTGTTTGCACCTTTAAATACATATTCTGCAGCTCTGTCTTGATCTGTAGGTGATCAACATTTGATGGTTTCTTGTAAATCCGTTATTGCAGGTTGCAAAGGACCCCTCAGACAAAGATATCAATGCGCTCGAGCAGCACATAAAGAACCTTCTATCACCGGCCACCCCAAATTTCTTCAACACTCTGTATGATCCATATAGAGAAGGTGCGGACTTTGTGCGTGGATACCCTTTCAGTCTCCGTGAGGGTGTCCCAACTGCAGTTTCTCATGGACTTTGGCTTAACATCCCTGACTACGATGCTCCTACACAGCTCGTTAAGCCTCGTGAAAGAAACTCCAGGTGTGTATGGATTATTGCTGTTGTGTTCCAATTAGTTTAGCTCGACCACCGATATGTTTCCTTCTATTCCAATATGCATAAATTATTGAGATGTTCTTTGTAAATCAGGTATGTAGATGCAGTCTTGACAATTCCCAAGGGAACCTTGTTTCCCATGTGTGGAATGAATCTTGCTTTCAACCGTGAACTGATTGGACCTGCTATGTATTTTGGACTCATGGGTGATGGCCAGCCAATTGGAAGATACGACGACATGTGGGCCGGTTGGTGTGTTAAGGTATATATACCCAAAATGTGACCCTTTTCTCTTTCTCTCTAGCCAAATGCAGAGTTAAAGTATTGATTAATGAACTTGTTGCAGGTAATTTGTGACCATTTGGGATGGGGAGTGAAAACAGGGCTTCCCTACATATGGCACAGCAAAGCCAGCAACCCATTCGTGAACCTCAAAAAGGAGTACAAAGGTATCTTCTGGCAAGAAGACATAATCCCGTTCTTCCAGTCGGTCGTCCTCCCAAAAGAATGCACAACGGTTCAGAAATGCTACATTGAACTGTCGAAGCTAGTGAAGGAGAAACTCGGCCCCATCGATCCTTACTTCCTTAAGCTGTCTGAGGCAATGGTCACTTGGATTGAAGCTTGGGATGAGCTCAACTCTGCTGGAGGGGACTCCAACGGCCCTGCCAAGAAGTAGGTTTTGTAAGGAACAAGGGAAACACATTTGGATGCAATAGATTTGATGAGTCTTTTGCTAGTTTTCTTATTACTTATGCCATATTTTTTCCCCTTCAGTATAATTTAAGGCTTAGAAGAATGTTGCTTGTTATTTATTTTGTGTATCCTTCTCTTCCCAAACATTGAATTGAGATCAATAACATGGGTAGCTTTTGTTAATTTTATTGTG ATGAACTTGTTGCAGGTAATTTGTGACCATTTGGGATGGGGAGTGAAAACAGGGCTTCCCTACATATGGCACAGCAAAGCCAGCAACCCATTCGTGAACCTCAAAAAGGAGTACAAAGGTATCTTCTGGCAAGAAGACATAATCCCGTTCTTCCAGTCGGTCGTCCTCCCAAAAGAATGCACAACGGTTCAGAAATGCTACATTGAACTGTCGAAGCTAGTGAAGGAGAAACTCGGCCCCATCGATCCTTACTTCCTTAAGCTGTCTGAGGCAATGGTCACTTGGATTGAAGCTTGGGATGAGCTCAACTCTGCTGGAGGGGACTCCAACGGCCCTGCCAAGAAGTAG MNLLQVICDHLGWGVKTGLPYIWHSKASNPFVNLKKEYKGIFWQEDIIPFFQSVVLPKECTTVQKCYIELSKLVKEKLGPIDPYFLKLSEAMVTWIEAWDELNSAGGDSNGPAKK Homology
BLAST of Cucsat.G4321.T4 vs. ExPASy Swiss-Prot
Match: O22666 (UDP-arabinopyranose mutase 3 OS=Arabidopsis thaliana OX=3702 GN=RGP3 PE=1 SV=2) HSP 1 Score: 194.5 bits (493), Expect = 6.5e-49 Identity = 83/104 (79.81%), Postives = 96/104 (92.31%), Query Frame = 0
BLAST of Cucsat.G4321.T4 vs. ExPASy Swiss-Prot
Match: O04300 (Probable UDP-arabinopyranose mutase 1 OS=Pisum sativum OX=3888 GN=UPTG PE=1 SV=1) HSP 1 Score: 193.4 bits (490), Expect = 1.5e-48 Identity = 83/101 (82.18%), Postives = 96/101 (95.05%), Query Frame = 0
BLAST of Cucsat.G4321.T4 vs. ExPASy Swiss-Prot
Match: P80607 (Probable UDP-arabinopyranose mutase 1 OS=Zea mays OX=4577 GN=UPTG PE=1 SV=2) HSP 1 Score: 191.0 bits (484), Expect = 7.2e-48 Identity = 89/112 (79.46%), Postives = 97/112 (86.61%), Query Frame = 0
BLAST of Cucsat.G4321.T4 vs. ExPASy Swiss-Prot
Match: Q8H8T0 (UDP-arabinopyranose mutase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=UAM1 PE=1 SV=1) HSP 1 Score: 190.3 bits (482), Expect = 1.2e-47 Identity = 86/112 (76.79%), Postives = 97/112 (86.61%), Query Frame = 0
BLAST of Cucsat.G4321.T4 vs. ExPASy Swiss-Prot
Match: Q9SC19 (Probable UDP-arabinopyranose mutase 1 OS=Solanum tuberosum OX=4113 GN=UPTG1 PE=1 SV=2) HSP 1 Score: 189.9 bits (481), Expect = 1.6e-47 Identity = 84/102 (82.35%), Postives = 91/102 (89.22%), Query Frame = 0
BLAST of Cucsat.G4321.T4 vs. NCBI nr
Match: XP_004144170.1 (probable UDP-arabinopyranose mutase 1 [Cucumis sativus] >KGN47655.1 hypothetical protein Csa_018250 [Cucumis sativus]) HSP 1 Score: 240 bits (612), Expect = 1.45e-76 Identity = 110/112 (98.21%), Postives = 112/112 (100.00%), Query Frame = 0
BLAST of Cucsat.G4321.T4 vs. NCBI nr
Match: XP_038885741.1 (probable UDP-arabinopyranose mutase 2 [Benincasa hispida]) HSP 1 Score: 232 bits (591), Expect = 2.17e-73 Identity = 106/112 (94.64%), Postives = 108/112 (96.43%), Query Frame = 0
BLAST of Cucsat.G4321.T4 vs. NCBI nr
Match: XP_008445443.1 (PREDICTED: alpha-1,4-glucan-protein synthase [UDP-forming] [Cucumis melo] >KAA0064771.1 alpha-1,4-glucan-protein synthase [Cucumis melo var. makuwa]) HSP 1 Score: 231 bits (590), Expect = 3.08e-73 Identity = 106/112 (94.64%), Postives = 110/112 (98.21%), Query Frame = 0
BLAST of Cucsat.G4321.T4 vs. NCBI nr
Match: XP_023002710.1 (probable UDP-arabinopyranose mutase 2 [Cucurbita maxima]) HSP 1 Score: 217 bits (553), Expect = 1.03e-67 Identity = 97/106 (91.51%), Postives = 103/106 (97.17%), Query Frame = 0
BLAST of Cucsat.G4321.T4 vs. NCBI nr
Match: XP_022132137.1 (alpha-1,4-glucan-protein synthase [UDP-forming] 2 [Momordica charantia]) HSP 1 Score: 217 bits (553), Expect = 1.16e-67 Identity = 97/111 (87.39%), Postives = 105/111 (94.59%), Query Frame = 0
BLAST of Cucsat.G4321.T4 vs. ExPASy TrEMBL
Match: A0A0A0KD82 (UDP-arabinopyranose mutase OS=Cucumis sativus OX=3659 GN=Csa_6G366530 PE=3 SV=1) HSP 1 Score: 240 bits (612), Expect = 7.04e-77 Identity = 110/112 (98.21%), Postives = 112/112 (100.00%), Query Frame = 0
BLAST of Cucsat.G4321.T4 vs. ExPASy TrEMBL
Match: A0A5A7VGD5 (UDP-arabinopyranose mutase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G00760 PE=3 SV=1) HSP 1 Score: 231 bits (590), Expect = 1.49e-73 Identity = 106/112 (94.64%), Postives = 110/112 (98.21%), Query Frame = 0
BLAST of Cucsat.G4321.T4 vs. ExPASy TrEMBL
Match: A0A1S3BDG1 (UDP-arabinopyranose mutase OS=Cucumis melo OX=3656 GN=8C01 PE=3 SV=1) HSP 1 Score: 231 bits (590), Expect = 1.49e-73 Identity = 106/112 (94.64%), Postives = 110/112 (98.21%), Query Frame = 0
BLAST of Cucsat.G4321.T4 vs. ExPASy TrEMBL
Match: A0A6J1KPR2 (UDP-arabinopyranose mutase OS=Cucurbita maxima OX=3661 GN=LOC111496489 PE=3 SV=1) HSP 1 Score: 217 bits (553), Expect = 5.01e-68 Identity = 97/106 (91.51%), Postives = 103/106 (97.17%), Query Frame = 0
BLAST of Cucsat.G4321.T4 vs. ExPASy TrEMBL
Match: A0A6J1BT06 (UDP-arabinopyranose mutase OS=Momordica charantia OX=3673 GN=LOC111005077 PE=3 SV=1) HSP 1 Score: 217 bits (553), Expect = 5.60e-68 Identity = 97/111 (87.39%), Postives = 105/111 (94.59%), Query Frame = 0
BLAST of Cucsat.G4321.T4 vs. TAIR 10
Match: AT3G08900.1 (reversibly glycosylated polypeptide 3 ) HSP 1 Score: 194.5 bits (493), Expect = 4.7e-50 Identity = 83/104 (79.81%), Postives = 96/104 (92.31%), Query Frame = 0
BLAST of Cucsat.G4321.T4 vs. TAIR 10
Match: AT3G02230.1 (reversibly glycosylated polypeptide 1 ) HSP 1 Score: 186.4 bits (472), Expect = 1.3e-47 Identity = 85/100 (85.00%), Postives = 92/100 (92.00%), Query Frame = 0
BLAST of Cucsat.G4321.T4 vs. TAIR 10
Match: AT5G15650.1 (reversibly glycosylated polypeptide 2 ) HSP 1 Score: 177.9 bits (450), Expect = 4.5e-45 Identity = 80/100 (80.00%), Postives = 90/100 (90.00%), Query Frame = 0
BLAST of Cucsat.G4321.T4 vs. TAIR 10
Match: AT5G50750.1 (reversibly glycosylated polypeptide 4 ) HSP 1 Score: 165.6 bits (418), Expect = 2.3e-41 Identity = 69/99 (69.70%), Postives = 86/99 (86.87%), Query Frame = 0
BLAST of Cucsat.G4321.T4 vs. TAIR 10
Match: AT5G16510.1 (Alpha-1,4-glucan-protein synthase family protein ) HSP 1 Score: 109.4 bits (272), Expect = 2.0e-24 Identity = 46/102 (45.10%), Postives = 72/102 (70.59%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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