Cucsat.G4075.T2 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TGAATAGGAAAAGAAGCCATGCAGTAGAAATTTTTTTGTTCAATTATTTCATCATACATGACACCTGTCCAAACGTGTCTCTCAAAGTTATTTAATGCTAGTAAAACCATTTGTTTTCTTCACAATTCCTCCGATTTTTTCTTCCTTGAATACACAAAAGCTTAAGTTCAAAGCAACTCATCAATGGTCAACATCTTCCACATCTACGACCAGGTTCTTCGTTGGGTAATGAAAGCAGCCGGAATCAAACCGGTTCAGCTTCAAATCAAACCCGGAACCGCCATGAACTTCTGGGTTCCCGCCGGAAAACCAAACAAAAACCACCAAAACCATCCTCCCCTCCTTTTCCTCCATGGGTTCGCCACCAATGCCATTATGACATGGCAATTCCAAGTCCTGAAGTTCGCCAAAAACCACGCCGTTTATGTACCGGACTTCATGTTCTTCGGGGATTCCGTTACGGATCGGCCGGACCGATCGACGGAGTTTCAGGCGGAGTGCGTGGTGGAGGGGTTGAGAAAATTGGGTGTGGACCGAAGGTTTGTTTTGGTGGGGTTTAGTTATGGGGCGATGGTGGGGTTTAGATTGGCGGAGATGTATCCGGAAATGGTGGAGGCGATGGTGGTTACGGCGGCGCCGACGGTGCTGACGGAAAGGATTACCGGAGAGGCAATGGAAAAAATAGGGTATAAGAGTTGGTCTGAATATTTGATACCGGAGACGGTGAAGGGTGCTATGTCTATGCTTGAAATTGCTTCCTTTGAATTTCCACGATTTCCACGTTGGATTTTCAAGCAATATCTGGAGGTACGTCAAAATTATTTTTGTAAAACCATTTCTTTTTTATTTATTTATTTTCCTTACGGAGAATTCAATGGTAAATAACCATAGATTGAAAAAAAAACATTTTTTTTGTGGGATATGGTTTTTAAAAGTTATTCTACTCATTTAACTATTTTATTTAAAATAAAAGTATAAAGTTATTTTTAAAAAACATTTTGAAACTCAAAATTCCCATTTTTAAAACGTATAGATCAAACCTATATATTCATCAAAACTTACAAACTAAAAAGATTAATATTTTTAAATATTTATTAACACTAGACAAGGTTGAATGTCATTAATATCGCAAATATTTAGGTCCTTTTGAAAACAAGTTTTGTGAAAAACTCAAGCTCTTAGTTAAATTCTAAAATCCCAAAACTTGCATTTAAAAAACCAAAACATGCAAACAAATAATTAACAAGTGAGTGCAATCAGATCAAAAATTGGATTCATTATTATTTTCTAGAATATAAAGAGTCATTTACGATAATTATTTGTAATTTTTTAAAAATGTTATTATATATTTAATTATTTTAAAATTAAATTATAAGGTAGAGTAGAGACCCATAAAGTTGCCATGCGTGCAGTTATTAGAGACGACCTCAGCAGATTTATAATATACATTTTTGTACATTATTATTGATGATGGGAAAACTGATTTGAAATTAGTATTTTGTTTTGTTAATAAAAGGAAAAGGATGGTTGTGATTGTAGGCCATGGTTGTTCACAGAAAGGAGAGGGCAGAACTCCTTGAAGCATTGGTTGCTCCAAATGATGTCACCATCTCTCAATATCCACAGGTTTTATAATTCTTTCCTTTTACTAAAAACAAAACAAAAATAGGTTGGAGCCATGCCTAATCTCCAAATGTTTGTGATTGGAAGTCAAAAGGTAACCTCAATTTTGAACACCAAACGTTCTATCCTCACCTTCGTATCAATTGAGCTAGACTCTTATTTACGTATGTCAATGAATAATTTTCTTCTTTTTGTTACTGTTATTTAACTCTTCTTATTTTAAAATTAGTTTTGATGTAACATTATAATGGAATTATAATAATATTCATTCACTTTATTTTTTTTTTTGCTTATTTTTCTTTGCAGAAGTTGCATATCATATGGGGGAGAAATGATAATTTGTTTGATATTCAAATTGCTTACAATATGAAGGAGTAAGTTATTTCTCATTCATTCTTATTTTAGTTTTTTTTTTTTTTCAAATTCAACAATTTTATTATTATTATTTTGAGTGTTGATGAATTATAATTGGTTCTACAATTTTATCAAATATATATTATAATCAAGATTTTGGTTTCTCAAACACGTTAATTCAATAAGAAAAAAATGGGTAGGAATCTCATTATATCAAACCCAAGCTTGAATATACTTATCATATCTACGTGGAAAAGTAATAAATGTGGTCTTACAAATTTCCTTAGCAGTAAAGTACTTTTCTATAATCATAATAATAATTATTATTATTTGGATTGATTGAATTTGAAATAATCATAATTTGGTGCAAAGGAAATTTGGAGAAAAAGCAACAATGGATTGCATAGAAAAAGCAGGCCATATTGTAGCAATGGAGCGCCCATTCATCTATAACAAATGCCTTCAAAAGTTTCTTCATTCACTGGAAGATAACTCCTACGAATGATCCATCTAATTATATAACCCTTCAAGTACTTTTATTTATTATATCTATAGTTGTATTTTAAGTTCAACCGTACTTTTCTAGTCTATATTATGTTTTTTTTCAATCATGAATTTTATTTATTGTCAAAGATATAATCCTGACAATCGATCATAGTTCATGTATAGTTTTTTATATAGTTTTACTTTGTCTCTAAATGCCAAAATATTACCCTTTGTCTCTAAGTTTTTAAATATTACATTATTGCAAGTTTTAACCAAGTTATAAAGTTAATTTCCCACTTAGATCATAGGCTTCA ATGGTCAACATCTTCCACATCTACGACCAGGTTCTTCGTTGGGTAATGAAAGCAGCCGGAATCAAACCGGTTCAGCTTCAAATCAAACCCGGAACCGCCATGAACTTCTGGGTTCCCGCCGGAAAACCAAACAAAAACCACCAAAACCATCCTCCCCTCCTTTTCCTCCATGGGTTCGCCACCAATGCCATTATGACATGGCAATTCCAAGTCCTGAAGTTCGCCAAAAACCACGCCGTTTATGTACCGGACTTCATGTTCTTCGGGGATTCCGTTACGGATCGGCCGGACCGATCGACGGAGTTTCAGGCGGAGTGCGTGGTGGAGGGGTTGAGAAAATTGGGTGTGGACCGAAGGTTTGTTTTGGTGGGGTTTAGTTATGGGGCGATGGTGGGGTTTAGATTGGCGGAGATGTATCCGGAAATGGTGGAGGCGATGGTGGTTACGGCGGCGCCGACGGTGCTGACGGAAAGGATTACCGGAGAGGCAATGGAAAAAATAGGGTATAAGAGTTGGTCTGAATATTTGATACCGGAGACGGTGAAGGGTGCTATGTCTATGCTTGAAATTGCTTCCTTTGAATTTCCACGATTTCCACGTTGGATTTTCAAGCAATATCTGGAGGCCATGGTTGTTCACAGAAAGGAGAGGGCAGAACTCCTTGAAGCATTGGTTGCTCCAAATGATGTCACCATCTCTCAATATCCACAGGTTTTATAA MVNIFHIYDQVLRWVMKAAGIKPVQLQIKPGTAMNFWVPAGKPNKNHQNHPPLLFLHGFATNAIMTWQFQVLKFAKNHAVYVPDFMFFGDSVTDRPDRSTEFQAECVVEGLRKLGVDRRFVLVGFSYGAMVGFRLAEMYPEMVEAMVVTAAPTVLTERITGEAMEKIGYKSWSEYLIPETVKGAMSMLEIASFEFPRFPRWIFKQYLEAMVVHRKERAELLEALVAPNDVTISQYPQVL Homology
BLAST of Cucsat.G4075.T2 vs. ExPASy Swiss-Prot
Match: Q6IE26 (Epoxide hydrolase 4 OS=Mus musculus OX=10090 GN=Ephx4 PE=2 SV=2) HSP 1 Score: 57.8 bits (138), Expect = 2.0e-07 Identity = 48/184 (26.09%), Postives = 83/184 (45.11%), Query Frame = 0
BLAST of Cucsat.G4075.T2 vs. ExPASy Swiss-Prot
Match: Q8IUS5 (Epoxide hydrolase 4 OS=Homo sapiens OX=9606 GN=EPHX4 PE=1 SV=2) HSP 1 Score: 57.0 bits (136), Expect = 3.4e-07 Identity = 41/140 (29.29%), Postives = 69/140 (49.29%), Query Frame = 0
BLAST of Cucsat.G4075.T2 vs. ExPASy Swiss-Prot
Match: G5EBI4 (Epoxide hydrolase 1 OS=Caenorhabditis elegans OX=6239 GN=ceeh-1 PE=1 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 8.4e-06 Identity = 35/129 (27.13%), Postives = 65/129 (50.39%), Query Frame = 0
BLAST of Cucsat.G4075.T2 vs. NCBI nr
Match: XP_004148865.1 (epoxide hydrolase 3 [Cucumis sativus] >KGN61797.1 hypothetical protein Csa_006154 [Cucumis sativus]) HSP 1 Score: 480 bits (1236), Expect = 5.13e-170 Identity = 235/239 (98.33%), Postives = 238/239 (99.58%), Query Frame = 0
BLAST of Cucsat.G4075.T2 vs. NCBI nr
Match: KAA0045542.1 (epoxide hydrolase 4-like [Cucumis melo var. makuwa] >TYK28850.1 epoxide hydrolase 4-like [Cucumis melo var. makuwa]) HSP 1 Score: 440 bits (1132), Expect = 3.71e-155 Identity = 213/238 (89.50%), Postives = 222/238 (93.28%), Query Frame = 0
BLAST of Cucsat.G4075.T2 vs. NCBI nr
Match: XP_016902619.1 (PREDICTED: uncharacterized protein LOC103499739 [Cucumis melo]) HSP 1 Score: 438 bits (1126), Expect = 6.50e-154 Identity = 212/238 (89.08%), Postives = 221/238 (92.86%), Query Frame = 0
BLAST of Cucsat.G4075.T2 vs. NCBI nr
Match: XP_038902558.1 (epoxide hydrolase 4-like [Benincasa hispida]) HSP 1 Score: 400 bits (1028), Expect = 2.36e-138 Identity = 192/239 (80.33%), Postives = 214/239 (89.54%), Query Frame = 0
BLAST of Cucsat.G4075.T2 vs. NCBI nr
Match: XP_023533135.1 (epoxide hydrolase 4-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 340 bits (872), Expect = 1.29e-115 Identity = 162/238 (68.07%), Postives = 195/238 (81.93%), Query Frame = 0
BLAST of Cucsat.G4075.T2 vs. ExPASy TrEMBL
Match: A0A0A0LLY6 (AB hydrolase-1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G247580 PE=4 SV=1) HSP 1 Score: 480 bits (1236), Expect = 2.48e-170 Identity = 235/239 (98.33%), Postives = 238/239 (99.58%), Query Frame = 0
BLAST of Cucsat.G4075.T2 vs. ExPASy TrEMBL
Match: A0A5A7TQB4 (Epoxide hydrolase 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold303G00590 PE=4 SV=1) HSP 1 Score: 440 bits (1132), Expect = 1.79e-155 Identity = 213/238 (89.50%), Postives = 222/238 (93.28%), Query Frame = 0
BLAST of Cucsat.G4075.T2 vs. ExPASy TrEMBL
Match: A0A1S4E310 (uncharacterized protein LOC103499739 OS=Cucumis melo OX=3656 GN=LOC103499739 PE=4 SV=1) HSP 1 Score: 438 bits (1126), Expect = 3.15e-154 Identity = 212/238 (89.08%), Postives = 221/238 (92.86%), Query Frame = 0
BLAST of Cucsat.G4075.T2 vs. ExPASy TrEMBL
Match: A0A6J1G806 (epoxide hydrolase 4-like OS=Cucurbita moschata OX=3662 GN=LOC111451675 PE=4 SV=1) HSP 1 Score: 333 bits (854), Expect = 3.11e-112 Identity = 160/237 (67.51%), Postives = 192/237 (81.01%), Query Frame = 0
BLAST of Cucsat.G4075.T2 vs. ExPASy TrEMBL
Match: A0A6J1KWX2 (epoxide hydrolase 4-like OS=Cucurbita maxima OX=3661 GN=LOC111499509 PE=4 SV=1) HSP 1 Score: 301 bits (771), Expect = 5.55e-101 Identity = 140/208 (67.31%), Postives = 173/208 (83.17%), Query Frame = 0
BLAST of Cucsat.G4075.T2 vs. TAIR 10
Match: AT2G18360.1 (alpha/beta-Hydrolases superfamily protein ) HSP 1 Score: 223.0 bits (567), Expect = 2.5e-58 Identity = 115/250 (46.00%), Postives = 166/250 (66.40%), Query Frame = 0
BLAST of Cucsat.G4075.T2 vs. TAIR 10
Match: AT4G36610.1 (alpha/beta-Hydrolases superfamily protein ) HSP 1 Score: 216.9 bits (551), Expect = 1.8e-56 Identity = 113/248 (45.56%), Postives = 161/248 (64.92%), Query Frame = 0
BLAST of Cucsat.G4075.T2 vs. TAIR 10
Match: AT1G78210.1 (alpha/beta-Hydrolases superfamily protein ) HSP 1 Score: 128.6 bits (322), Expect = 6.5e-30 Identity = 76/229 (33.19%), Postives = 122/229 (53.28%), Query Frame = 0
BLAST of Cucsat.G4075.T2 vs. TAIR 10
Match: AT4G39955.1 (alpha/beta-Hydrolases superfamily protein ) HSP 1 Score: 112.8 bits (281), Expect = 3.7e-25 Identity = 69/209 (33.01%), Postives = 107/209 (51.20%), Query Frame = 0
BLAST of Cucsat.G4075.T2 vs. TAIR 10
Match: AT4G33180.1 (alpha/beta-Hydrolases superfamily protein ) HSP 1 Score: 109.4 bits (272), Expect = 4.1e-24 Identity = 65/218 (29.82%), Postives = 124/218 (56.88%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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