Cucsat.G21587.T2 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G21587.T2
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	E3 ubiquitin-protein ligase COP1-like
Location	ctg944: 684658 .. 696329 (-)
RNA-Seq Expression	Cucsat.G21587.T2
Synteny	Cucsat.G21587.T2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCCTCCCCCTCCCCTCCTCCCTCCGACCTAATGCCTCCTCAATTCCAACCCGACGCTGCCAATGCTGCTGCTCCTACTCCCACTCCCACTCCCACTACCGCCCCCTCTCATTCTAATACCGATGATTTGGATAAGGATATGCTTTGCCCTATTTGCATGCAGATCATTAAGGATGCCTTCCTCACTACTTGTGGACATAGCTTTTGTTATATGTGTATTGTTACTCATCTTCGTAATAAGAGTGATTGCCCTTGTTGCGCTCATTTTCTCCGGAGTAACAGCATTTTCCCCAATATTTTGCTTGATAAGGTTTGATCATCTTCATTTCTTTTTTTCTTTTTTATTTCACTTCTTTCTTCAATTGGATCTTCATTCCTTTCTTTTTCTTTTTCAATTTTATTTCCTCTCCCTATTTAATTTTACGCCATTTTTTAGTTGATAATCACATCTTAGTTTGTAGTTTTCAAGTATTTATGGGTCACTCAGTGCCTAAGATTTCGACACTTTGACTGTTGTTGCATTGGAGACTGTTATATACTGTGAGAGATTGATTGTTTAATGCTTTTTTTTTTATATAATAATTAAGTCATTCCATTATGCCCGAGATTATCTTTCTTTAATTTCATTGATTTTTGCTGGTCTTCCCCTAGATCTGTGCAGTTCCTTAGGATATTTTTGTTATGCAATCTAGATTCTATATGTATGTTTGCTAATTTTTTTGACATTTGTTTTTTGGAAAATTGTTTATGGAATCTGTGGTCCTAATAGTGAATGTCTAAGTGTATCTTGATTTGGAGTTGAAAATATTATACAGTAGAGTTACATTAAAAAAAACAGAAAGTATAAACTTCTATATATAGTCTTTCATGTTATAAACTGTTTTTAGTTTTGTAAAAAATAAATAGTATCGCATACTATACTAAAAATTTTTAGATATTTAAAATAATAGTTATACAGAATTTACATGTTCATTAATTTTAGATATAATCATGATCTGTGATTCTGTTTTATAGGTTGCTATACATGAATTACATGTTCATTAATTAATAATAATAGATGAGATTTAATAATATAATAATTTTGTTACTCGAGCTATTCTTGTGGTTTATAAAATATATTATCAACACATTATGAACATTTTCTTATTTTGGAATCCAATTTTGAAATATGCTGCAAAATACATCCAAAAGTATTGAAAACATGAAATACATTTTTTTAATTGAAAACACATTTTTTTTTAAATTGAAAACACATTTTTTTAATTGAATCTCTTGTTGTTAAATATTTAAAGTTTAAGGGGCAATAAAGACTTAAGCGCAAGATGCAAAAGAAAGTGTGGACTTTTTTTTTATGGGGAGTATATATAAAAGTACTACATTAAGAAGAGAAAGCAAATCATAATTGAAGTGGAAATATGAAAAACAAAAAAAAAAAAGATCCCTTAACGCAAGACATTTTGGATTTAGGCTTAGTAAATTTAATTTTTCTAATTAATAAATAAGGAAAACCCCTAATTATTGCTGTTTAAAAAAACAATAATAAAGCCCCAAGGTGTAGGGCTTTGAGCCTTAGGGCTTCATAATGAAAGGCTGTGCCTGAGGCACGCCTTATTTTGTGAGCCTCACCTTTCAAGGCAAGGCACCAGTCCTAGACCTTGAGCCTAGGCACGGACCTCAGAGCGCTTTTCAAAACACTGACCATATGTAGCTTTACCTTACATTCCGAGCAAAACTGTCTTGCATGTCAGCTGAGCTATGGCTTTACAATTTGTGACCTAGGCTACTTACATGGTAGAAGTTCCCAAAATCTTCATTGTGCAGTAGTTTAGCTTGATGCTAAAGTATTGTAATGTTTTATATTTAGTGTCTGATGCAATGTTAATTTTCCAATTATGCTGATGATACCTTGATCACATATTCATTTCAACTGGATTATGCAATGTTGCAATCATAAAAAGGGGGACTCTTTTTCAAAATAAATAAATAAGGGGTTGAATTTCCAATTTGACCTTATGGTTTGGAGAAAGTTAAAATTTAGTCCATGTGGTTTTAACAAACCATGGAGGATAAATTGAAGTTATATGGACTGAATTCTAACCTTTTTGAAGGACCAAGTTTGTAAATTAACCTAAATAATAATTATGCAATGAAACAAATCAACACTCTTTTTTAGAATATTTCAGTTCAAACAAGGAGTAAGGATTCACATCTGGAAGGGAGGTTTTCCAGTGTCTTGAGTAGTTGAACTGTTCAAGTTGGTTTTTATAATTGGATATTTTTGGCTCTAATATTTCAGTGATATTATGGAAGCTTCATGTTTTGTTGAAACTAAATTCTTATGCCCTTGTCTCTGACTTTATTTCTATTGATTGTGTCATTTCTATTGATTGTGTCATGATGTTTTTGTAATTCTGAATTGCAATCTTGAATTATGAGATTGATGCATCTTCATGGTTTCTTGCAATCATTTTTGCAGTTGTTAAAGAAAACTTCTGCTCGTCAGATAAAGAAGACTGCATCCCCATTTGGATATCTTCAACAGGCATTACAAAAGGTCAGCACAATTTCCATTACAATATATATACATATATTTTCTTTTTCAGAATTACAACTCACCATCACTCCAGTATGGAAAATGAACTTTAAAAGGTGTGCATCATTACCTTCAACATAGGGTTTGAGGACAATAAAGTTTTCTTAGTTGACTGTCATACTATTATTTCCACATTTGCTAATCTATGGATTTTAGTACAAACTTCCTATCATTAATCTCCTTACTATCAACCTCATCATTAAACAAGCTGAACTTTTCCGTCTCAACTTTTTGCCAGGGATGTGACATGTCAATAAAGGATCTGGAAGAACTTTTAACTCTTCTCACAGAGAAGAAAAGAAAAATGGAGCAAGAAGAAGCAGAGACAAATATGCAAATTTTACTTGGCTTCTTGTATTGCTTGAGAAAGCAAAAGCTCGAGGAGCTCAATGAGGTCTCTTTTACTTTGATTGTCATTTTTTTGTTTCTTGCTTATTATAAATTGGTATATGAATTTTTCGTTACTTCAATGATGAAGAGTGTTTCTGGTTCAAAAAAAAAAAAAAAGAAAGAGCAACAAACAAACAAAAAAGGTACATGAACAAGTTTATGTGCTCTTATGGAAAAAAAGAAGTTTTTTTTCTTAGGCTTGGTTGGTTAACCTGTCCGTAATTTGATTGGCTGCTTTTCAGTGTGTAAAAAATAGTAACGACTTGATTTAATATACAGGTATGAGTAACTAATGTTTGGAATTCAAGTAAGTTTAACTTTATGAAGTTGGAAATGGACTTAATGTTACTAGAAGAAGTATAAACTACTTTGATTAATGACTAAGATTGAAGAAGTACAAACTACTTTGATTTATGACTAAGATGGAGTAAGTAGTTTAGACATAACTAAATTTGTCCAGGGCATCTAAATTCCATTTTATGGAACTCTATATTTCAATCAAGTATCGGAACAATTCTTTTAATATTCTCTAGCACATTGTTGAGTTTTTATTTTCTTTTGTTTTTTGAAACGGATACAAACTTCTTTATTGATAATAAACTCAAAGTACAAGAGAGTTATACGGTGAGAGTAATAGAGAAGCCTAGAAAGGGGAGAGAGAGCGGATTAGTAGGTGTATCTGGACATCTCAACTAGGTTGACACCCCCTTAGCACCCTCATCATATCCAAATAAAAGAAAGATACTAAGGTCATGCAAAGACTGAAAATAACAATATAAACTACCAATCTGTAGACAGATGCAAAGCTGAAAAATAATAAAACATATGGAGAGATACAAAATAAAGCAAAGCAAAACTTCAAAGAAACAAATCCTGGCCTAGCAATCTGGAAAATATCAGCCCTGATTCTCTTCAGATGAAGGCAGTCCAGTGTCTTTAACTCATTTGTAAATTCGTCCACAATTGTGCTCTCTGCCTTCATAGTAATCACCAACCATACTTTAGTATAACCTTATATGGAGTATGGCTAAGTTTAACTTACATGTGTATAGAGGGTATTATGTTTAGGGATTATGACTGTATTACTGGCATTTTAGAACGTCCGGCGTTGGTGTATGCACCAAGCATTTTCCCATTATAAATACAGAGGATCTCCCATTGATTCATTCAAGAATATCTTTTGTTGATTTGCTTCGTTATTTATTTATTTTCTCATTATAGATACAAGCTGATCTTCACTACATTAAGGAAGACATTAGCTCTGTGGAGAAGCAGAGATTGGAACTATATAGGTCTAAAGAAAGGTATTCGGGAAAAATGAAAATGCTCGCCGATGACACCGTATCCACAAAATCACGGTCTTCCTTAATCGACAAGCATGGAAATGGAATTAATAGTGGCGCCCAACGGTCACAAGGCTGGATGAGTTCTGGGAATTCCCCCAATCCTAGAGCAGATGCAAAGATACAATTAAGCTCCCAGGGACCACTTAGAAAAGATGCTTATTGTAGTTCAGATTTGCATTCTGTTGCACAATCTGGACTAACTGTAGCAAATAAAAGGAGGGTTCATACACAGGTAAAACTTTTATTTCAATTTAAATTTCACTTTACAGAAAAGTTATCACAATGGTGCTAATCACAGTCTGGCTTATTAGTCAGCAAAATTGCAATGATGGAGATTTAATTAGTATACTCTGAAACAACAATCGAGGTTATTGTGAAGATTGTAGATATTTGCTTCTTGGTTCTAGTGATGTTACTTTTACAAATATCATTATGACTCTCAAGCTCTTAAGTAATCATCTTTCTATTCCATATTTTAACCAATGAATACAGTGATACTCTAGTTTTTGATTGCATACACTTAAAAATTATGTTTGTCTTTCATTTTTCCGCACTTATATAGTAAGAGGCCTCGTTGCTATTTGCCTCCTTACTGGATTTTATGAACAATGTACTGGTGAAACTCTGGAGTCTGGATTGTTATTTCTTCATTATGGTTTTGGTATGTCCATGTGGAATAAACTCCTTTTTGAAACTTTAAGTTCAATCTTCTTTCCCTAAAGTCGAGTCTTCTTTTTGTTAGATTTTGGCCTAGGACTCCTGAAAACAGCATTCCTTTTAAGGATATGTCCAATTTCAGCTATTTTGTAGGTATTATGGATTTAGCAGGATAGAAATATTTGGGAGTTGTAATAATGCTTAGGCCAAAGTCTCGGTTTCTTACCAATAAACAAGAAAATAGCTTAAGCTGAAGTGGGCAGTTAGCTTTTTTGTTTCTATCTTTTCCTGGTACGAGGAATTGACAGTCTGTTCTGCTTCTGTTGAAAGCTTCTGTTGGAGATCTTGTATTGTTGATTCTCTTTCTGTTGCTTAACCTATTTATTAATATTTGTGATATGAAAACCCAACTAATTGGAATTGAAAACCCTTTTGGGATGAGAAATCACTAAAACCCCCCAAATTAACTCGATTTCAACCTTAAGGACTGGGTTAGACATTGATTGCCTTAAAGATCAAATATCTTAAGACAAATAACACATTTCTCAATCCAAGATTCGAATACTCCACCAGATAAGATGATCAGTCTCATTTAAATGTTCTTGGAATGCAACTCAATACATGAGTTACAAAATTTAAGAAGCTCTGCTGGCTAAACTTGAAAGAAACACAAATAATCTCTCTCCAAACAACCTAATAGCAAGGCTGAAATGGCCTCCTATCATAGTGAAAAGATAAAATCCCTTACTTAATAAGTCAAAAAAAGGATATAATTGGAAAAATATTAAAATTATATCAAAATTGTTAAATTAAAATTTATTTAATAATTTGATGCTTGAGTGGTTCATATCAATTTGTTATCTGTTTTACGTTTCTATAAACAAAATATGTATTACTTTTGAATTTTGATTAAAGGATAAAATGAAGATTAAGGCATTTAATTTCTCTTTTTTTTTTTTTTTGAGAAAAAGAGAGGGATTAGGAAAATAATTTGTCACCTAAAGCAATGAGTGAGCAGGTCAGGACTTTTTGTACAATAAGGAAAGTTCGGTCAGCCTATCAGAAAAGAGCTCTTCCTAGTTTGCTCATGTCAACATCTAGTTTGGAGGAGCTGTACATTAATTTGTTTTCTTTTTCTTTCATATTGATTTATTTTGTGAAATTAGGAAACTTTTAGCTTGTCTGTGCTGATTAAATCCATCTACTGATGTTATTTTGTCAACTGTTCTTAAGTTAAAGTGCAGTCAGCCGATTAGAAAAGAGTTCTTCCTTGTTTGCTTAAGTTATGTCAACATCTTTCAAAACTTAATGGTCATTTAGTTGGGGGAGCTGTACATTAATTTATTTTCTATTTCTTTGATATTGATTTTTTTTGTGAAATTAGGCAAATTTTAGCTTGTCTGCGCTGATTAAATCCATCTAGTGATGTTATTTTGTCAACCTTTCTTAAGTTAAGAAATAGCGTTGTTAACGTGAAATGGAATGCCTACAATTATTGACATTCAATTTTTATCCTTTTCTATAGTTTAATGAATTGCAAGATTGCTATCTGCAAAAACGACGAAATTGGAGGAAACAATTGTATAAACAAGAAGATAGGGACATAAAGTTTAGTGGCGGAGAAAGTTATAATCCATCTCTTGAAGATTTTCAATCTGTGCTAACTTCTTTTATGCGATACAGGTACAATTTTTATTTACTTATTTTAATTATTTGGCATTGGTTCTCTCGTGAGTGTTAGCTGACATAATTTACTTCTGTCTTATCACATGGCTTATGGATTAGCCGATTGAGGGTCATTGCGGAACTTCCACACGGCGATCTTTTTCATTCACCAAATATTGTATCGAGGTGAGGGATTGATATTACATTATACATTCCTTTGGTTGGGAGTTCTGCTGGGGCAGTTATTTTACTTGATCATTCTATTTATTCAATCATAATGCACTTTAATTTTGATAAATCATGGTACAATTTAGCCTATAGTAGATATCTGGTTTAAGTTAAAAAATAAGTTTAGTTGAATTTGTAGTTACTTTTTGTCCTAAGCTACCTGAAACCTTTTGTCAACAATGTCAAGGATGTCCCCAATTGTTACAGATTTTGAATTAATGAGATTCTTTTGACTGACATTTATTTTTATAAATTACTTTGAGCCTTCTCCAATCACCATTTTGTCTTTCACTGAGAGTCTGAGATAAATACATGTCCATTATTTTTAGGATTTGTCCTCAGTTGTAAAATTTCAGAAATGATAATCATGTCATTCTTGTTTCAGTATAGAGTTTGATCGTGATGACGAGTTCTTTGCAACTGCTGGTGTCTCACGTTGTATCAAGGTTTTTGAGTTTAGCTCGGTAAGGATTTAACGTTTATTCATTGAAAAACTAAGTGTTTGGTATTAATAGCTAAGGAGACACATGTAATATAATAATCTGTCAATTAGATACAGAAGATGGTGATACTATGATTCATATTTTCAATATTCATTTCACATTTACTATAGGAATTGTTTTCTGCTAGCCATTGGCCCATTTGTTTGTTTAGAAAGTTAAATTTTCTTTCATTCATTTGGTAAAGTGTATTTGTAAAAGTAAGAGTCAATCTACAGAAATGTTAACATCTCTGGAGCTGCTAAGGAAATTCCATTCTAAAAATCTTGGAATTGGGAACATACCTAAACTTTTTGATTGGGTTGATTAAACTTTATTCTCTACCTACATGGATTATGCATTACTTTCAACACTCCAAATTCATACGAAGGATTAATAAATGAACATACGTAATACCTATGGTTTTAAAAATGTGAGTGTTTGAAAGCAAGCACAAAAGTTATTCAAGGCTTAAGTATGGGGCTGAACTTTTCTTGTGAGGTGTGCAATGGAAAATGTAGGTAAATTTTTATATATACACTAAAATATATATTTATATTAATAAGATCAGGAATGTCTTAAAAGTAGTTTTTTAGGAGATCATTGAGAGGAATGGAACTTTCTAGAATTATTTATTGATTTCATAATAACAAGTCTGATAATTAACAAACAAAAAATTGAAGTTTAAGCACGGCTCAACTAGACTTTTCTTGTGAGGTGCACAATAAAATAGAAGAATATAGATAGTTTTATATATATGCTAAAATGTAAGGATATGAAACCCTGATCCTTTGGAGGGGGGTGCAAGTCTTTCTTTCATAATTTGGTTCATCCTTCTCCCCTTGGTATGTTGGTTTTTGGTGCTTTGAAGGATTAGTATTCCAAGGAAAGTGAGATTCTTTACATGGAAATTTTTACACGGTTGTGCTAACATGATGAATTGGGTTTAGAGGAAGCTTCCCCTTGCTTGTTGGTCATTTCTATTGCTTTCTTTGTCGAAAGGTGGAGGAAGAGCTGGACCATATGCTTTGACGTTCCAAGTTGGCTAGTTCAGTCTGGGATTCTTTCTATCATACATTTGGCATTGTGGTTGCTTGTCAGAAGGATGTTTGTGCAATGATTGAGGAGTTCCTACTCAACCCACTTTGTGGGGGTGAGGTCACTTTCTTTAGTTTTCAGGGATGTCTGCTATTTTGTGAGTTTTGTGGGGCGAGTGGCATAGTAGAACTAGAGATTTGCTCTCTTGTTTGTTTTCATGTTTCTTTGTGGACTTCAATTTTAAAGGCTTTCTGTAACTGTTCTATAGGTGTTATTTTGCGTAGTTGGAGTTTCGTTTTATAGAGAGTTTATTTTATTGGTATTCCTTTCCTTTTTTTCTCTTGAAAGTGGTTATCTCATAATATATATATACAGTGTTCTAAAACCCCTCTCGGGTGCTCACCTAGACTCAAGGATGATATTTGAACGTCAAGAACAACTGATAAATATTGTTTAAATTGTTGTGGCTTTGTATTGATCATCCATTAGGGAAATACAGAGCACAAATCTGCCTAATGTTTTATATGATGGTTCATGACCACACGATATACCTGTATCTTTTTCTTAAAAAAATTTAATTTCAATATAGATGATGCGAATATAAATTATTTACCAAATATCAATAGTACTTGCTCTTTCCAGGTGGTAAACGAACCAGCAGATGTTCACTTTCCCGTTGTGGAGATGGCTACTCGGTCAAAACTTAGCTGCTTGAGCTGGAATAAATACACAAAAAGTCATATTGCTAGTAGTGATTATGAGGGAATAGTAACTGTCTGGGATGTTAATACTCGTCAGGTGGTGGCCATTATCTATTTAAAGTTTTCTTAGTTTGTCGATTATCTCCATTATTTGGTCAGACCTCTCTTTTTTAACCCGCTCTTTACATTTTAGAGTGTTATGGAGTACGAAGAACATGAAAAACGAGCTTGGAGTGTTGATTTTTCACGTTCTGAACCTTCCATGCTGGTATCGGGCAGTGATGACTGTAAGGTATTTGATTGAAGCAAACACTATTTTGAGTTGGTTAAGATTATTGATTCAAAATGAGCAATTCCCTAATTTCTGTATTGCAATATTTTTCGTCTTTTTCAATAGTTAAATTTGTAGCAGAGGATATTTGACTTGTCAGCTCTGGCACTTGGAAAATGCTATCCTTTGTTGAGTGGTATCTGTCAATTCGCCAATATAATTTTGGATCCATGCTGAAACTGTTTCACATGATTTGTAGAAATTCTCCAATACAATGTTGTATTACTCATGTCTGGGTCAAAGGGTTAATAGTTTGTCTGTTGTGGGTGGTTTTTTCTTAAACAAGTTCTTTTCCTGCATACTAACTTCAAGTTACAACACTAGGTTCTTTCAATCATTCTTTTTTCTGATACTATTCTCAGGTGCATTGCTCTTTTTCTTTTAACAGGTCAAAATTTGGTGCACAAGACAGGAAGCTAGTGTGTTTAACATCGATATGAAAGCAAATGTTTGCTCAGTCAAGTACAACCCAGGATCTAGCTTATACGTAGCTGTATGTCTATTTTGGTCTCTTTACACAAATATCATAGCTACAGATTTACCAACTATCGTGAACACCCTTTGGCAAATCCTTCTCTCCCTAATACTAAAGTGTTTTCAGGTGGGTTCCGCTGATCATAACATCCACTACTACGACTTGAGAAATATCAGCCAACCGCTGCATGTTTTTAATGGCCATAAGAAGGCTGTTTCTTATGTGAAATTCTTGTCGAACAATGAACTTGCTTCTGCATCAACTGACAGCACTTTGCGGTTGTGGGATGTAAAGGAAAATTTGCCTGTGAGTTATCTTCTTGATATGTTATCCATTGACATCCAAAATGAAGTTGTTAATCTTATGAAATTGTGCTCCTTGTTCCCTCTTTTTTGTCACTCAATAATCTTTCTTGCCAATTCCCACAACTGGTTTGAAAACCAAAGCATTAAACCATTTGAAAATTTGCTAAACTTAAACTTTTTCGCAAAGGACATGGTGTGGTTATTGTGCTTTCTGGAACTAGGGATCTTGTCATTGTTATGGCTTAGACACCTTTTCTTCTCTTTCTCTCTTCTCTCTGACTTCTATAAAATTGAGAACCGTTCTCTCTGTTAAGCACATTTAGACGGTTATGGAGAAGGAGAACTAACATATTTTATATAACATGTTTGGGAGGGGTTATGAACGGTTGAAGTCACTTTTGTCCTTTTCAAAATTACTCTTGAAATGGTTTTCAATCATTGAAAATTCAACTTTAACAGCATGACATTTGCATTTAAAGTGTAAAGTTGAATTAAGTTTGAGTGATTGAAGGTGTGTTTCAAGGTGATTTTGTCTCAACCAATATAGAGCTAAAGTGTACAAGTACTGATTCATCTCTTTTATAATTATTTCAGATTTGTGTGTATAGAGGACACACAAACGAGAAGAATTTTGTGGGTCTAACAGTCAACAGTGAATACATAGCATGCGGCAGTGAAACTAATGAAGTTTTCATTTACCACAAGGTTATCATTTTTATTATTTCACCATCTTGTTTTCAACTACATAAACTTTTGCTTTTGATATGAATATTATCAAGTATCAAGTTAGTAAAAGGGAATTTACTTGCAGGCAATATCAAAACCAATGGCTTGGCATAGGTTTAGTTCAGATTTGGAAGATAACGATGAAGATGCAGGTTCATATTTCATAAGTGCTGTTTGTTGGAAAAGTGATAGCCCAACAATTTTAACAGCAAACAGCCAAGGAACAATCAAAGTGCTGGTACTTGCACCCTAAATATCACAATAAACTTGAGAGAAAGAGAAGACAAGGAAAGTATAATAAGGTAACAAAACTCATCGCCCTCAGTCCGTGTATATGGTGATATTGATATTACTTCCATGTATATCAGCTTGTAAATTTGGTTTTCATTCAACTTCTGTGGAAAGGGTGGATTATGCAATGCTATGTGGACTCCATCTCCTCACTTAGATATATTTTTCTCTTTTTTTTCTCTTTTTTTTTTTTTTGGGTTAGGGTTAGTGGGAATATTGGTAGAAATATGTGATTATTTGCAAGCTAAGTTTAGAATGAATATTTGTTGGAGAGTTGAAAAGAGTTCAATACGTAGTTTGAAATACTGAAAATGCTTGTATATTATACTATTGGACTTTGATGGGGAGAGACCAAATGTAGAGATTCATAAATACTTAGAACTTATGTAAAGGAAATGAAATGAAATTTAAACTTGATTATTGTCATTCAATTTTTTTCTAAAACAT

Coding sequence (CDS)

CCCTCCCCCTCCCCTCCTCCCTCCGACCTAATGCCTCCTCAATTCCAACCCGACGCTGCCAATGCTGCTGCTCCTACTCCCACTCCCACTCCCACTACCGCCCCCTCTCATTCTAATACCGATGATTTGGATAAGGATATGCTTTGCCCTATTTGCATGCAGATCATTAAGGATGCCTTCCTCACTACTTGTGGACATAGCTTTTGTTATATGTGTATTGTTACTCATCTTCGTAATAAGAGTGATTGCCCTTGTTGCGCTCATTTTCTCCGGAGTAACAGCATTTTCCCCAATATTTTGCTTGATAAGTTGTTAAAGAAAACTTCTGCTCGTCAGATAAAGAAGACTGCATCCCCATTTGGATATCTTCAACAGGCATTACAAAAGGGATGTGACATGTCAATAAAGGATCTGGAAGAACTTTTAACTCTTCTCACAGAGAAGAAAAGAAAAATGGAGCAAGAAGAAGCAGAGACAAATATGCAAATTTTACTTGGCTTCTTGTATTGCTTGAGAAAGCAAAAGCTCGAGGAGCTCAATGAGATACAAGCTGATCTTCACTACATTAAGGAAGACATTAGCTCTGTGGAGAAGCAGAGATTGGAACTATATAGGTCTAAAGAAAGGTATTCGGGAAAAATGAAAATGCTCGCCGATGACACCGTATCCACAAAATCACGGTCTTCCTTAATCGACAAGCATGGAAATGGAATTAATAGTGGCGCCCAACGGTCACAAGGCTGGATGAGTTCTGGGAATTCCCCCAATCCTAGAGCAGATGCAAAGATACAATTAAGCTCCCAGGGACCACTTAGAAAAGATGCTTATTGTAGTTCAGATTTGCATTCTGTTGCACAATCTGGACTAACTGTAGCAAATAAAAGGAGGGTTCATACACAGTTTAATGAATTGCAAGATTGCTATCTGCAAAAACGACGAAATTGGAGGAAACAATTGTATAAACAAGAAGATAGGGACATAAAGTTTAGTGGCGGAGAAAGTTATAATCCATCTCTTGAAGATTTTCAATCTGTGCTAACTTCTTTTATGCGATACAGCCGATTGAGGGTCATTGCGGAACTTCCACACGGCGATCTTTTTCATTCACCAAATATTGTATCGAGTATAGAGTTTGATCGTGATGACGAGTTCTTTGCAACTGCTGGTGTCTCACGTTGTATCAAGGTTTTTGAGTTTAGCTCGTACTTGCTCTTTCCAGGTGGTAAACGAACCAGCAGATGTTCACTTTCCCGTTGTGGAGATGGCTACTCGGTCAAAACTTAG

Protein sequence

PSPSPPPSDLMPPQFQPDAANAAAPTPTPTPTTAPSHSNTDDLDKDMLCPICMQIIKDAFLTTCGHSFCYMCIVTHLRNKSDCPCCAHFLRSNSIFPNILLDKLLKKTSARQIKKTASPFGYLQQALQKGCDMSIKDLEELLTLLTEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLELYRSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINSGAQRSQGWMSSGNSPNPRADAKIQLSSQGPLRKDAYCSSDLHSVAQSGLTVANKRRVHTQFNELQDCYLQKRRNWRKQLYKQEDRDIKFSGGESYNPSLEDFQSVLTSFMRYSRLRVIAELPHGDLFHSPNIVSSIEFDRDDEFFATAGVSRCIKVFEFSSYLLFPGGKRTSRCSLSRCGDGYSVKT

Homology

[Close]

BLAST of Cucsat.G21587.T2 vs. ExPASy Swiss-Prot
Match: P93471 (E3 ubiquitin-protein ligase COP1 OS=Pisum sativum OX=3888 GN=COP1 PE=2 SV=1)

HSP 1 Score: 442.2 bits (1136), Expect = 6.7e-123
Identity = 237/399 (59.40%), Postives = 298/399 (74.69%), Query Frame = 0


Query: 10  LMPPQFQPDAANAAAPTPTPTPTTAPSHSNTDDLDKDMLCPICMQIIKDAFLTTCGHSFC 69
           L+P   +P+ +   + T T    T        DLDKD LCPICMQIIKDAFLT CGHSFC
Sbjct: 9   LVPAVVKPEPSKNFS-TDTTAAGTFLLVPTMSDLDKDFLCPICMQIIKDAFLTACGHSFC 68

Query: 70  YMCIVTHLRNKSDCPCCAHFLRSNSIFPNILLDKLLKKTSARQIKKTASPFGYLQQALQK 129
           YMCI+THLRNKSDCPCC H+L ++++FPN LLDKLLKKTS RQI KTASP  + +QA+QK
Sbjct: 69  YMCIITHLRNKSDCPCCGHYLTNSNLFPNFLLDKLLKKTSDRQISKTASPVEHFRQAVQK 128

Query: 130 GCDMSIKDLEELLTLLTEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYI 189
           GC++++K+L+ LL LLTEKKRKMEQEEAE NMQILL FL+CLRKQK++EL E+Q DL +I
Sbjct: 129 GCEVTMKELDTLLLLLTEKKRKMEQEEAERNMQILLDFLHCLRKQKVDELKEVQTDLQFI 188

Query: 190 KEDISSVEKQRLELYRSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINSGAQRSQGWM 249
           KEDI +VEK R++LYR+++RYS K++ML DD+   KSR S +D + +G+ S     +G +
Sbjct: 189 KEDIGAVEKHRMDLYRARDRYSVKLRML-DDSGGRKSRHSSMDLNSSGLASSPLNLRGGL 248

Query: 250 SSGNSPNPRADAKIQLSSQGP--LRKDAYCSSDLHSVAQSGLTVANKRRVHTQFNELQDC 309
           SSG S   + D K Q+SS G    R+D    SD   + QSGL +  K+RVHTQFN+LQ+C
Sbjct: 249 SSG-SHTKKNDGKSQISSHGHGIQRRDPITGSDSQYINQSGLALVRKKRVHTQFNDLQEC 308

Query: 310 YLQKRRNWRKQLYKQEDRDIKFSGGESYNPSLEDFQSVLTSFMRYSRLRVIAELPHGDLF 369
           YLQKRR    + + Q++RD  F   E Y+  L+DFQSVLT+F RYSRLRVIAE+ HGD+F
Sbjct: 309 YLQKRRQAADKPHGQQERDTNFISREGYSCGLDDFQSVLTTFTRYSRLRVIAEIRHGDIF 368

Query: 370 HSPNIVSSIEFDRDDEFFATAGVSRCIKVFEFSSYLLFP 407
           HS NIVSSIEFDRDD+ FATAGVSR IKVF+FS+ +  P
Sbjct: 369 HSANIVSSIEFDRDDDLFATAGVSRRIKVFDFSAVVNEP 404

[Close]

BLAST of Cucsat.G21587.T2 vs. ExPASy Swiss-Prot
Match: P43254 (E3 ubiquitin-protein ligase COP1 OS=Arabidopsis thaliana OX=3702 GN=COP1 PE=1 SV=2)

HSP 1 Score: 437.2 bits (1123), Expect = 2.2e-121
Identity = 234/410 (57.07%), Postives = 293/410 (71.46%), Query Frame = 0


Query: 8   SDLMPPQFQPDAANAAAPTPTPTPTTAPSHSNTD-----------DLDKDMLCPICMQII 67
           +D + P  +PD      P  +     A  H N D           DLDKD+LCPICMQII
Sbjct: 6   TDPVVPAVKPD------PRTSSVGEGANRHENDDGGSGGSEIGAPDLDKDLLCPICMQII 65

Query: 68  KDAFLTTCGHSFCYMCIVTHLRNKSDCPCCAHFLRSNSIFPNILLDKLLKKTSARQIKKT 127
           KDAFLT CGHSFCYMCI+THLRNKSDCPCC+  L +N ++PN LLDKLLKKTSAR + KT
Sbjct: 66  KDAFLTACGHSFCYMCIITHLRNKSDCPCCSQHLTNNQLYPNFLLDKLLKKTSARHVSKT 125

Query: 128 ASPFGYLQQALQKGCDMSIKDLEELLTLLTEKKRKMEQEEAETNMQILLGFLYCLRKQKL 187
           ASP    ++ALQ+GCD+SIK+++ LLTLL E+KRKMEQEEAE NMQILL FL+CLRKQK+
Sbjct: 126 ASPLDQFREALQRGCDVSIKEVDNLLTLLAERKRKMEQEEAERNMQILLDFLHCLRKQKV 185

Query: 188 EELNEIQADLHYIKEDISSVEKQRLELYRSKERYSGKMKMLADDTVSTKSRSSLIDKHGN 247
           +ELNE+Q DL YIKEDI++VE+ R++LYR+++RYS K++ML DD  +  +     +K+  
Sbjct: 186 DELNEVQTDLQYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDPSTRNAWPH--EKNQI 245

Query: 248 GINSGAQRSQGWMSSGNSPNPRADAKIQLSSQGPLRKDAYCSSDLHSVAQSGLTVANKRR 307
           G NS +   +G    GN  N + + K Q SS G  +KDA   SD  S+ QS +++A K+R
Sbjct: 246 GFNSNSLSIRGGNFVGNYQNKKVEGKAQGSSHGLPKKDALSGSDSQSLNQSTVSMARKKR 305

Query: 308 VHTQFNELQDCYLQKRRNWRKQLYKQEDRDIKFSGGESYNPSLEDFQSVLTSFMRYSRLR 367
           +H QFN+LQ+CYLQKRR    Q   +++ D      E Y+  L DFQSVLT+F RYSRLR
Sbjct: 306 IHAQFNDLQECYLQKRRQLADQPNSKQENDKSVVRREGYSNGLADFQSVLTTFTRYSRLR 365

Query: 368 VIAELPHGDLFHSPNIVSSIEFDRDDEFFATAGVSRCIKVFEFSSYLLFP 407
           VIAE+ HGD+FHS NIVSSIEFDRDDE FATAGVSRCIKVF+FSS +  P
Sbjct: 366 VIAEIRHGDIFHSANIVSSIEFDRDDELFATAGVSRCIKVFDFSSVVNEP 407

[Close]

BLAST of Cucsat.G21587.T2 vs. ExPASy Swiss-Prot
Match: Q8NHY2 (E3 ubiquitin-protein ligase COP1 OS=Homo sapiens OX=9606 GN=COP1 PE=1 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 2.4e-35
Identity = 116/383 (30.29%), Postives = 188/383 (49.09%), Query Frame = 0


Query: 41  DDLDKDMLCPICMQIIKDAFLTTCGHSFCYMCIVTHLRNKSDCPCCAHFLRS-NSIFPNI 100
           +D   D +CPIC  +I++A++T CGHSFCY CI   L + + CP C + + + + ++PN 
Sbjct: 128 EDKSNDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNF 187

Query: 101 LLDKLLKKTSARQIKK-------TASPFGYLQQALQK--GCDMSIKDLEE---LLTLLTE 160
           L+++L+ K   R  +K        +S  G+  Q  Q   G D    DL     +L LL +
Sbjct: 188 LVNELILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDWLGTDQDNLDLANVNLMLELLVQ 247

Query: 161 KKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLELYRSK 220
           KK+++E E     +QIL+ FL   R+ K E+L +IQ +L  ++EDI  VE+         
Sbjct: 248 KKKQLEAESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEM-------- 307

Query: 221 ERYSGKMKMLADDT------VSTKSRSSLIDKHGNGINSGAQRSQGWMSSGNSPNPRADA 280
              SG    +++D+        + S SS+ID          + SQ    SG+S       
Sbjct: 308 ---SGLYSPVSEDSTVPQFEAPSPSHSSIID--------STEYSQPPGFSGSSQT----- 367

Query: 281 KIQLSSQGPLRKDAYCSSDLHSVAQSGLTVANKRRVHTQFNELQDCYLQKRRNWRKQLYK 340
                     +K  + +S L S          ++R+   F +L+ CY   R +       
Sbjct: 368 ----------KKQPWYNSTLAS---------RRKRLTAHFEDLEQCYFSTRMS------- 427

Query: 341 QEDRDIKFSGGESYNPSLEDFQSVLTSFMRYSRLRVIAELPH-GDLFHSPNIVSSIEFDR 400
                 + S        L++FQ  L+ F RY+ +R +A L +  DL++  +IVSSIEFDR
Sbjct: 428 ------RISDDSRTASQLDEFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDR 454

Query: 401 DDEFFATAGVSRCIKVFEFSSYL 404
           D ++FA AGV++ IKV+E+ + +
Sbjct: 488 DCDYFAIAGVTKKIKVYEYDTVI 454

[Close]

BLAST of Cucsat.G21587.T2 vs. ExPASy Swiss-Prot
Match: Q9R1A8 (E3 ubiquitin-protein ligase COP1 OS=Mus musculus OX=10090 GN=Cop1 PE=1 SV=2)

HSP 1 Score: 151.0 bits (380), Expect = 3.1e-35
Identity = 116/383 (30.29%), Postives = 187/383 (48.83%), Query Frame = 0


Query: 41  DDLDKDMLCPICMQIIKDAFLTTCGHSFCYMCIVTHLRNKSDCPCCAHFLRS-NSIFPNI 100
           +D   D +CPIC  +I++A++T CGHSFCY CI   L + + CP C + + + + ++PN 
Sbjct: 130 EDKSNDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNF 189

Query: 101 LLDKLLKKTSARQIKK-------TASPFGYLQQALQK--GCDMSIKDLEE---LLTLLTE 160
           L+++L+ K   R  +K        +S  G+  Q  Q   G D    DL     +L LL +
Sbjct: 190 LVNELILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLANVNLMLELLVQ 249

Query: 161 KKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLELYRSK 220
           KK+++E E     +QIL+ FL   R+ K E+L +IQ +L  ++EDI  VE+         
Sbjct: 250 KKKQLEAESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEM-------- 309

Query: 221 ERYSGKMKMLADDT------VSTKSRSSLIDKHGNGINSGAQRSQGWMSSGNSPNPRADA 280
              SG    +++D+        + S SS+ID          + SQ    SG S       
Sbjct: 310 ---SGLYSPVSEDSTVPQFEAPSPSHSSIID--------STEYSQPPGFSGTSQT----- 369

Query: 281 KIQLSSQGPLRKDAYCSSDLHSVAQSGLTVANKRRVHTQFNELQDCYLQKRRNWRKQLYK 340
                     +K  + +S L S          ++R+   F +L+ CY   R +       
Sbjct: 370 ----------KKQPWYNSTLAS---------RRKRLTAHFEDLEQCYFSTRMS------- 429

Query: 341 QEDRDIKFSGGESYNPSLEDFQSVLTSFMRYSRLRVIAELPH-GDLFHSPNIVSSIEFDR 400
                 + S        L++FQ  L+ F RY+ +R +A L +  DL++  +IVSSIEFDR
Sbjct: 430 ------RISDDSRTASQLDEFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDR 456

Query: 401 DDEFFATAGVSRCIKVFEFSSYL 404
           D ++FA AGV++ IKV+E+ + +
Sbjct: 490 DCDYFAIAGVTKKIKVYEYGTVI 456

[Close]

BLAST of Cucsat.G21587.T2 vs. ExPASy Swiss-Prot
Match: Q9SYX2 (Protein SUPPRESSOR OF PHYA-105 1 OS=Arabidopsis thaliana OX=3702 GN=SPA1 PE=1 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 5.0e-09
Identity = 63/261 (24.14%), Postives = 116/261 (44.44%), Query Frame = 0


Query: 144 LLTEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLEL 203
           L+ E         AE   ++LL FL  L  QK ++ +++  D+  +++DI   E+     
Sbjct: 528 LICEDDSVKSTAAAEEISELLLHFLSSLEVQKKKKASKLLQDIQTLEDDIKEAER----- 587

Query: 204 YRSKERYSGKMKML-ADDTVSTKSRSSLIDKHGNGINSGAQRSQGWMSSGNSPNPRADAK 263
                RYS  + ++ +   +  + +SS +D+H          S  ++ + N+    ++ +
Sbjct: 588 -----RYSSNVSLVRSHGAIEKRVQSSPLDEH------CTTSSALFVPTANTDRLMSNIR 647

Query: 264 IQLSSQGPLRKDAYCSSDLHSVAQSGLTVANKRRVHTQFNELQDCYLQKRRNWRKQLYKQ 323
            QL       +     S   + A+S  T+ ++ R     NE QD   +            
Sbjct: 648 -QLEDAYFFMRSQINLSSSAATARSDKTLKDRDRCSENQNENQDMSTK------------ 707

Query: 324 EDRDIKFSGGESYNPSLEDFQSVLTSFMRYSRLRVIAELPHGDLFHSPNIVSSIEFDRDD 383
                    G+S +  LE F   L  F RYS+      +  GDL +S ++V S+ FD D+
Sbjct: 708 ---------GKS-SDQLEVFFEGLCKFARYSKFETCGTIRSGDLLNSASVVCSLSFDPDE 749

Query: 384 EFFATAGVSRCIKVFEFSSYL 404
           E  A AG+S+ IK+F+F++++
Sbjct: 768 EHIAAAGISKKIKIFDFNAFM 749

[Close]

BLAST of Cucsat.G21587.T2 vs. NCBI nr
Match: XP_004145465.3 (E3 ubiquitin-protein ligase COP1 isoform X1 [Cucumis sativus] >KAE8653640.1 hypothetical protein Csa_007625 [Cucumis sativus])

HSP 1 Score: 776 bits (2005), Expect = 3.87e-278
Identity = 392/396 (98.99%), Postives = 393/396 (99.24%), Query Frame = 0


Query: 11  MPPQFQPDAANAAAPTPTPTPTTAPSHSNTDDLDKDMLCPICMQIIKDAFLTTCGHSFCY 70
           MPPQFQPDAANAAAPTPTPTPTTAPSHSNTDDLDKDMLCPICMQIIKDAFLTTCGHSFCY
Sbjct: 1   MPPQFQPDAANAAAPTPTPTPTTAPSHSNTDDLDKDMLCPICMQIIKDAFLTTCGHSFCY 60

Query: 71  MCIVTHLRNKSDCPCCAHFLRSNSIFPNILLDKLLKKTSARQIKKTASPFGYLQQALQKG 130
           MCIVTHLRNKSDCPCCAHFLRSNSIFPNILLDKLLKKTSARQIKKTASPFGYLQQALQKG
Sbjct: 61  MCIVTHLRNKSDCPCCAHFLRSNSIFPNILLDKLLKKTSARQIKKTASPFGYLQQALQKG 120

Query: 131 CDMSIKDLEELLTLLTEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIK 190
           CDMSIKDLEELLTLLTEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIK
Sbjct: 121 CDMSIKDLEELLTLLTEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIK 180

Query: 191 EDISSVEKQRLELYRSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINSGAQRSQGWMS 250
           EDISSVEKQRLELYRSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINSGAQRSQGWMS
Sbjct: 181 EDISSVEKQRLELYRSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINSGAQRSQGWMS 240

Query: 251 SGNSPNPRADAKIQLSSQGPLRKDAYCSSDLHSVAQSGLTVANKRRVHTQFNELQDCYLQ 310
           SGNSPNPRADAKIQLSSQGPLRKDAYCSSDLHSVAQSGLTVANKRRVHTQFNELQDCYLQ
Sbjct: 241 SGNSPNPRADAKIQLSSQGPLRKDAYCSSDLHSVAQSGLTVANKRRVHTQFNELQDCYLQ 300

Query: 311 KRRNWRKQLYKQEDRDIKFSGGESYNPSLEDFQSVLTSFMRYSRLRVIAELPHGDLFHSP 370
           KRRNWRKQLYKQEDRDIKFSGGESYNPSLEDFQSVLTSFMRYSRLRVIAELPHGDLFHSP
Sbjct: 301 KRRNWRKQLYKQEDRDIKFSGGESYNPSLEDFQSVLTSFMRYSRLRVIAELPHGDLFHSP 360

Query: 371 NIVSSIEFDRDDEFFATAGVSRCIKVFEFSSYLLFP 406
           NIVSSIEFDRDDEFFATAGVSRCIKVFEFSS +  P
Sbjct: 361 NIVSSIEFDRDDEFFATAGVSRCIKVFEFSSVVNEP 396

[Close]

BLAST of Cucsat.G21587.T2 vs. NCBI nr
Match: XP_008458987.1 (PREDICTED: E3 ubiquitin-protein ligase COP1-like [Cucumis melo] >KAA0043144.1 E3 ubiquitin-protein ligase COP1-like [Cucumis melo var. makuwa])

HSP 1 Score: 738 bits (1906), Expect = 1.97e-262
Identity = 379/404 (93.81%), Postives = 386/404 (95.54%), Query Frame = 0


Query: 3   PSPPPSDLMPPQFQPDAANAAAPTPTPTPTTAPSHSNTDDLDKDMLCPICMQIIKDAFLT 62
           P PPPSDLMP QF P+ ANAAA T  PTPT A SHS+TDDLDKDMLCPICMQIIKDAFLT
Sbjct: 39  PPPPPSDLMP-QFLPEDANAAAAT--PTPTAAASHSDTDDLDKDMLCPICMQIIKDAFLT 98

Query: 63  TCGHSFCYMCIVTHLRNKSDCPCCAHFLRSNSIFPNILLDKLLKKTSARQIKKTASPFGY 122
           TCGHSFCYMCIVTHLRNKSDCPCCAHFLRS SIFPNILLDKLLKKTSARQIKKT SPFGY
Sbjct: 99  TCGHSFCYMCIVTHLRNKSDCPCCAHFLRSTSIFPNILLDKLLKKTSARQIKKTTSPFGY 158

Query: 123 LQQALQKGCDMSIKDLEELLTLLTEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEI 182
           LQQALQKGCDM+IKDLEELLTLL EKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEI
Sbjct: 159 LQQALQKGCDMTIKDLEELLTLLAEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEI 218

Query: 183 QADLHYIKEDISSVEKQRLELYRSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINSGA 242
           QADLHYIKEDISSVEKQRLEL+RSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINSG 
Sbjct: 219 QADLHYIKEDISSVEKQRLELHRSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINSGV 278

Query: 243 QRSQGWMSSGNSPNPRADAKIQLSSQGPLRKDAYCSSDLHSVAQSGLTVANKRRVHTQFN 302
           QRSQGWMSSGNSPNPRADAKIQLSSQGPLRKDAYCSSDLHS+AQSGLTVANKRRVHTQFN
Sbjct: 279 QRSQGWMSSGNSPNPRADAKIQLSSQGPLRKDAYCSSDLHSIAQSGLTVANKRRVHTQFN 338

Query: 303 ELQDCYLQKRRNWRKQLYKQEDRDIKFSGGESYNPSLEDFQSVLTSFMRYSRLRVIAELP 362
           ELQDCYLQKRRNWRKQLYKQEDRDIKFSGGESYNP+LEDFQSVLTSFMRYSRLRVIAEL 
Sbjct: 339 ELQDCYLQKRRNWRKQLYKQEDRDIKFSGGESYNPALEDFQSVLTSFMRYSRLRVIAELR 398

Query: 363 HGDLFHSPNIVSSIEFDRDDEFFATAGVSRCIKVFEFSSYLLFP 406
           HGDLFHS NIVSSIEFDRDDEFFATAGVSRCIKVFEFSS +  P
Sbjct: 399 HGDLFHSANIVSSIEFDRDDEFFATAGVSRCIKVFEFSSVVNEP 439

[Close]

BLAST of Cucsat.G21587.T2 vs. NCBI nr
Match: XP_038894733.1 (E3 ubiquitin-protein ligase COP1-like [Benincasa hispida])

HSP 1 Score: 731 bits (1887), Expect = 1.27e-259
Identity = 375/406 (92.36%), Postives = 381/406 (93.84%), Query Frame = 0


Query: 1   PSPSPPPSDLMPPQFQPDAANAAAPTPTPTPTTAPSHSNTDDLDKDMLCPICMQIIKDAF 60
           P P PPPSDLMPPQF+P  ANAAAP          S SNTDDLDKDMLCPICMQIIKDAF
Sbjct: 38  PPPPPPPSDLMPPQFEPGDANAAAPA---------SQSNTDDLDKDMLCPICMQIIKDAF 97

Query: 61  LTTCGHSFCYMCIVTHLRNKSDCPCCAHFLRSNSIFPNILLDKLLKKTSARQIKKTASPF 120
           LTTCGHSFCYMCIVTHLRNKSDCPCCAHFLRSNSIFPNILLDKLLKKTSARQIKK+ S F
Sbjct: 98  LTTCGHSFCYMCIVTHLRNKSDCPCCAHFLRSNSIFPNILLDKLLKKTSARQIKKSTSQF 157

Query: 121 GYLQQALQKGCDMSIKDLEELLTLLTEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELN 180
           GYL QALQKGCDMSIKDLEELLTLL EKKRKMEQEEAETNMQILLGFLYCLRKQKLEELN
Sbjct: 158 GYLHQALQKGCDMSIKDLEELLTLLAEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELN 217

Query: 181 EIQADLHYIKEDISSVEKQRLELYRSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINS 240
           EIQADLHYIKEDISSVEKQRLELYRSKERYSGKMKMLADDT+STKSRSSLIDKHGNGINS
Sbjct: 218 EIQADLHYIKEDISSVEKQRLELYRSKERYSGKMKMLADDTISTKSRSSLIDKHGNGINS 277

Query: 241 GAQRSQGWMSSGNSPNPRADAKIQLSSQGPLRKDAYCSSDLHSVAQSGLTVANKRRVHTQ 300
           GAQRSQGW+SSGNSPNPRADAKIQLSSQGPLRKDAYCSSDLHSVAQSGLTVANKRRVHTQ
Sbjct: 278 GAQRSQGWVSSGNSPNPRADAKIQLSSQGPLRKDAYCSSDLHSVAQSGLTVANKRRVHTQ 337

Query: 301 FNELQDCYLQKRRNWRKQLYKQEDRDIKFSGGESYNPSLEDFQSVLTSFMRYSRLRVIAE 360
           FNELQDCYLQKRRNWRKQLYKQEDRDIKFS GESYNP+LEDFQSVLTSFMRYSRLRVIAE
Sbjct: 338 FNELQDCYLQKRRNWRKQLYKQEDRDIKFSSGESYNPALEDFQSVLTSFMRYSRLRVIAE 397

Query: 361 LPHGDLFHSPNIVSSIEFDRDDEFFATAGVSRCIKVFEFSSYLLFP 406
           L HGDLFHS NIVSSIEFDRDDEFFATAGVSRCIKVFEFSS +  P
Sbjct: 398 LRHGDLFHSANIVSSIEFDRDDEFFATAGVSRCIKVFEFSSVVNEP 434

[Close]

BLAST of Cucsat.G21587.T2 vs. NCBI nr
Match: XP_031735991.1 (E3 ubiquitin-protein ligase COP1 isoform X2 [Cucumis sativus])

HSP 1 Score: 725 bits (1872), Expect = 5.54e-258
Identity = 369/385 (95.84%), Postives = 371/385 (96.36%), Query Frame = 0


Query: 22  AAAPTPTPTPTTAPSHSNTDDLDKDMLCPICMQIIKDAFLTTCGHSFCYMCIVTHLRNKS 81
           A  PT    P+T  S   TDDLDKDMLCPICMQIIKDAFLTTCGHSFCYMCIVTHLRNKS
Sbjct: 8   ALVPTVKTEPSTLDSTPYTDDLDKDMLCPICMQIIKDAFLTTCGHSFCYMCIVTHLRNKS 67

Query: 82  DCPCCAHFLRSNSIFPNILLDKLLKKTSARQIKKTASPFGYLQQALQKGCDMSIKDLEEL 141
           DCPCCAHFLRSNSIFPNILLDKLLKKTSARQIKKTASPFGYLQQALQKGCDMSIKDLEEL
Sbjct: 68  DCPCCAHFLRSNSIFPNILLDKLLKKTSARQIKKTASPFGYLQQALQKGCDMSIKDLEEL 127

Query: 142 LTLLTEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRL 201
           LTLLTEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRL
Sbjct: 128 LTLLTEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRL 187

Query: 202 ELYRSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINSGAQRSQGWMSSGNSPNPRADA 261
           ELYRSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINSGAQRSQGWMSSGNSPNPRADA
Sbjct: 188 ELYRSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINSGAQRSQGWMSSGNSPNPRADA 247

Query: 262 KIQLSSQGPLRKDAYCSSDLHSVAQSGLTVANKRRVHTQFNELQDCYLQKRRNWRKQLYK 321
           KIQLSSQGPLRKDAYCSSDLHSVAQSGLTVANKRRVHTQFNELQDCYLQKRRNWRKQLYK
Sbjct: 248 KIQLSSQGPLRKDAYCSSDLHSVAQSGLTVANKRRVHTQFNELQDCYLQKRRNWRKQLYK 307

Query: 322 QEDRDIKFSGGESYNPSLEDFQSVLTSFMRYSRLRVIAELPHGDLFHSPNIVSSIEFDRD 381
           QEDRDIKFSGGESYNPSLEDFQSVLTSFMRYSRLRVIAELPHGDLFHSPNIVSSIEFDRD
Sbjct: 308 QEDRDIKFSGGESYNPSLEDFQSVLTSFMRYSRLRVIAELPHGDLFHSPNIVSSIEFDRD 367

Query: 382 DEFFATAGVSRCIKVFEFSSYLLFP 406
           DEFFATAGVSRCIKVFEFSS +  P
Sbjct: 368 DEFFATAGVSRCIKVFEFSSVVNEP 392

[Close]

BLAST of Cucsat.G21587.T2 vs. NCBI nr
Match: TYK12320.1 (E3 ubiquitin-protein ligase COP1-like [Cucumis melo var. makuwa])

HSP 1 Score: 723 bits (1865), Expect = 9.36e-256
Identity = 379/434 (87.33%), Postives = 386/434 (88.94%), Query Frame = 0


Query: 3   PSPPPSDLMPPQFQPDAANAAAPTPTPTPTTAPSHSNTDDLDKDMLCPICMQIIKDAFLT 62
           P PPPSDLMP QF P+ ANAAA T  PTPT A SHS+TDDLDKDMLCPICMQIIKDAFLT
Sbjct: 39  PPPPPSDLMP-QFLPEDANAAAAT--PTPTAAASHSDTDDLDKDMLCPICMQIIKDAFLT 98

Query: 63  TCGHSFCYMCIVTHLRNKSDCPCCAHFLRSNSIFPNILLDK------------------- 122
           TCGHSFCYMCIVTHLRNKSDCPCCAHFLRS SIFPNILLDK                   
Sbjct: 99  TCGHSFCYMCIVTHLRNKSDCPCCAHFLRSTSIFPNILLDKITNRMQCSFKAQGAIKRNC 158

Query: 123 -----------LLKKTSARQIKKTASPFGYLQQALQKGCDMSIKDLEELLTLLTEKKRKM 182
                      LLKKTSARQIKKT SPFGYLQQALQKGCDM+IKDLEELLTLL EKKRKM
Sbjct: 159 LLGLKRKMQKKLLKKTSARQIKKTTSPFGYLQQALQKGCDMTIKDLEELLTLLAEKKRKM 218

Query: 183 EQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLELYRSKERYSG 242
           EQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLEL+RSKERYSG
Sbjct: 219 EQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLELHRSKERYSG 278

Query: 243 KMKMLADDTVSTKSRSSLIDKHGNGINSGAQRSQGWMSSGNSPNPRADAKIQLSSQGPLR 302
           KMKMLADDTVSTKSRSSLIDKHGNGINSG QRSQGWMSSGNSPNPRADAKIQLSSQGPLR
Sbjct: 279 KMKMLADDTVSTKSRSSLIDKHGNGINSGVQRSQGWMSSGNSPNPRADAKIQLSSQGPLR 338

Query: 303 KDAYCSSDLHSVAQSGLTVANKRRVHTQFNELQDCYLQKRRNWRKQLYKQEDRDIKFSGG 362
           KDAYCSSDLHS+AQSGLTVANKRRVHTQFNELQDCYLQKRRNWRKQLYKQEDRDIKFSGG
Sbjct: 339 KDAYCSSDLHSIAQSGLTVANKRRVHTQFNELQDCYLQKRRNWRKQLYKQEDRDIKFSGG 398

Query: 363 ESYNPSLEDFQSVLTSFMRYSRLRVIAELPHGDLFHSPNIVSSIEFDRDDEFFATAGVSR 406
           ESYNP+LEDFQSVLTSFMRYSRLRVIAEL HGDLFHS NIVSSIEFDRDDEFFATAGVSR
Sbjct: 399 ESYNPALEDFQSVLTSFMRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDEFFATAGVSR 458

[Close]

BLAST of Cucsat.G21587.T2 vs. ExPASy TrEMBL
Match: A0A0A0LYH0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G699620 PE=4 SV=1)

HSP 1 Score: 789 bits (2038), Expect = 9.24e-283
Identity = 400/406 (98.52%), Postives = 401/406 (98.77%), Query Frame = 0


Query: 1   PSPSPPPSDLMPPQFQPDAANAAAPTPTPTPTTAPSHSNTDDLDKDMLCPICMQIIKDAF 60
           P P PPPSDLMPPQFQPDAANAAAPTPTPTPTTAPSHSNTDDLDKDMLCPICMQIIKDAF
Sbjct: 37  PPPPPPPSDLMPPQFQPDAANAAAPTPTPTPTTAPSHSNTDDLDKDMLCPICMQIIKDAF 96

Query: 61  LTTCGHSFCYMCIVTHLRNKSDCPCCAHFLRSNSIFPNILLDKLLKKTSARQIKKTASPF 120
           LTTCGHSFCYMCIVTHLRNKSDCPCCAHFLRSNSIFPNILLDKLLKKTSARQIKKTASPF
Sbjct: 97  LTTCGHSFCYMCIVTHLRNKSDCPCCAHFLRSNSIFPNILLDKLLKKTSARQIKKTASPF 156

Query: 121 GYLQQALQKGCDMSIKDLEELLTLLTEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELN 180
           GYLQQALQKGCDMSIKDLEELLTLLTEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELN
Sbjct: 157 GYLQQALQKGCDMSIKDLEELLTLLTEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELN 216

Query: 181 EIQADLHYIKEDISSVEKQRLELYRSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINS 240
           EIQADLHYIKEDISSVEKQRLELYRSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINS
Sbjct: 217 EIQADLHYIKEDISSVEKQRLELYRSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINS 276

Query: 241 GAQRSQGWMSSGNSPNPRADAKIQLSSQGPLRKDAYCSSDLHSVAQSGLTVANKRRVHTQ 300
           GAQRSQGWMSSGNSPNPRADAKIQLSSQGPLRKDAYCSSDLHSVAQSGLTVANKRRVHTQ
Sbjct: 277 GAQRSQGWMSSGNSPNPRADAKIQLSSQGPLRKDAYCSSDLHSVAQSGLTVANKRRVHTQ 336

Query: 301 FNELQDCYLQKRRNWRKQLYKQEDRDIKFSGGESYNPSLEDFQSVLTSFMRYSRLRVIAE 360
           FNELQDCYLQKRRNWRKQLYKQEDRDIKFSGGESYNPSLEDFQSVLTSFMRYSRLRVIAE
Sbjct: 337 FNELQDCYLQKRRNWRKQLYKQEDRDIKFSGGESYNPSLEDFQSVLTSFMRYSRLRVIAE 396

Query: 361 LPHGDLFHSPNIVSSIEFDRDDEFFATAGVSRCIKVFEFSSYLLFP 406
           LPHGDLFHSPNIVSSIEFDRDDEFFATAGVSRCIKVFEFSS +  P
Sbjct: 397 LPHGDLFHSPNIVSSIEFDRDDEFFATAGVSRCIKVFEFSSVVNEP 442

[Close]

BLAST of Cucsat.G21587.T2 vs. ExPASy TrEMBL
Match: A0A5A7TIH5 (E3 ubiquitin-protein ligase COP1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold110G00010 PE=4 SV=1)

HSP 1 Score: 738 bits (1906), Expect = 9.52e-263
Identity = 379/404 (93.81%), Postives = 386/404 (95.54%), Query Frame = 0


Query: 3   PSPPPSDLMPPQFQPDAANAAAPTPTPTPTTAPSHSNTDDLDKDMLCPICMQIIKDAFLT 62
           P PPPSDLMP QF P+ ANAAA T  PTPT A SHS+TDDLDKDMLCPICMQIIKDAFLT
Sbjct: 39  PPPPPSDLMP-QFLPEDANAAAAT--PTPTAAASHSDTDDLDKDMLCPICMQIIKDAFLT 98

Query: 63  TCGHSFCYMCIVTHLRNKSDCPCCAHFLRSNSIFPNILLDKLLKKTSARQIKKTASPFGY 122
           TCGHSFCYMCIVTHLRNKSDCPCCAHFLRS SIFPNILLDKLLKKTSARQIKKT SPFGY
Sbjct: 99  TCGHSFCYMCIVTHLRNKSDCPCCAHFLRSTSIFPNILLDKLLKKTSARQIKKTTSPFGY 158

Query: 123 LQQALQKGCDMSIKDLEELLTLLTEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEI 182
           LQQALQKGCDM+IKDLEELLTLL EKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEI
Sbjct: 159 LQQALQKGCDMTIKDLEELLTLLAEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEI 218

Query: 183 QADLHYIKEDISSVEKQRLELYRSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINSGA 242
           QADLHYIKEDISSVEKQRLEL+RSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINSG 
Sbjct: 219 QADLHYIKEDISSVEKQRLELHRSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINSGV 278

Query: 243 QRSQGWMSSGNSPNPRADAKIQLSSQGPLRKDAYCSSDLHSVAQSGLTVANKRRVHTQFN 302
           QRSQGWMSSGNSPNPRADAKIQLSSQGPLRKDAYCSSDLHS+AQSGLTVANKRRVHTQFN
Sbjct: 279 QRSQGWMSSGNSPNPRADAKIQLSSQGPLRKDAYCSSDLHSIAQSGLTVANKRRVHTQFN 338

Query: 303 ELQDCYLQKRRNWRKQLYKQEDRDIKFSGGESYNPSLEDFQSVLTSFMRYSRLRVIAELP 362
           ELQDCYLQKRRNWRKQLYKQEDRDIKFSGGESYNP+LEDFQSVLTSFMRYSRLRVIAEL 
Sbjct: 339 ELQDCYLQKRRNWRKQLYKQEDRDIKFSGGESYNPALEDFQSVLTSFMRYSRLRVIAELR 398

Query: 363 HGDLFHSPNIVSSIEFDRDDEFFATAGVSRCIKVFEFSSYLLFP 406
           HGDLFHS NIVSSIEFDRDDEFFATAGVSRCIKVFEFSS +  P
Sbjct: 399 HGDLFHSANIVSSIEFDRDDEFFATAGVSRCIKVFEFSSVVNEP 439

[Close]

BLAST of Cucsat.G21587.T2 vs. ExPASy TrEMBL
Match: A0A1S3C954 (E3 ubiquitin-protein ligase COP1-like OS=Cucumis melo OX=3656 GN=LOC103498239 PE=4 SV=1)

HSP 1 Score: 738 bits (1906), Expect = 9.52e-263
Identity = 379/404 (93.81%), Postives = 386/404 (95.54%), Query Frame = 0


Query: 3   PSPPPSDLMPPQFQPDAANAAAPTPTPTPTTAPSHSNTDDLDKDMLCPICMQIIKDAFLT 62
           P PPPSDLMP QF P+ ANAAA T  PTPT A SHS+TDDLDKDMLCPICMQIIKDAFLT
Sbjct: 39  PPPPPSDLMP-QFLPEDANAAAAT--PTPTAAASHSDTDDLDKDMLCPICMQIIKDAFLT 98

Query: 63  TCGHSFCYMCIVTHLRNKSDCPCCAHFLRSNSIFPNILLDKLLKKTSARQIKKTASPFGY 122
           TCGHSFCYMCIVTHLRNKSDCPCCAHFLRS SIFPNILLDKLLKKTSARQIKKT SPFGY
Sbjct: 99  TCGHSFCYMCIVTHLRNKSDCPCCAHFLRSTSIFPNILLDKLLKKTSARQIKKTTSPFGY 158

Query: 123 LQQALQKGCDMSIKDLEELLTLLTEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEI 182
           LQQALQKGCDM+IKDLEELLTLL EKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEI
Sbjct: 159 LQQALQKGCDMTIKDLEELLTLLAEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEI 218

Query: 183 QADLHYIKEDISSVEKQRLELYRSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINSGA 242
           QADLHYIKEDISSVEKQRLEL+RSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINSG 
Sbjct: 219 QADLHYIKEDISSVEKQRLELHRSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINSGV 278

Query: 243 QRSQGWMSSGNSPNPRADAKIQLSSQGPLRKDAYCSSDLHSVAQSGLTVANKRRVHTQFN 302
           QRSQGWMSSGNSPNPRADAKIQLSSQGPLRKDAYCSSDLHS+AQSGLTVANKRRVHTQFN
Sbjct: 279 QRSQGWMSSGNSPNPRADAKIQLSSQGPLRKDAYCSSDLHSIAQSGLTVANKRRVHTQFN 338

Query: 303 ELQDCYLQKRRNWRKQLYKQEDRDIKFSGGESYNPSLEDFQSVLTSFMRYSRLRVIAELP 362
           ELQDCYLQKRRNWRKQLYKQEDRDIKFSGGESYNP+LEDFQSVLTSFMRYSRLRVIAEL 
Sbjct: 339 ELQDCYLQKRRNWRKQLYKQEDRDIKFSGGESYNPALEDFQSVLTSFMRYSRLRVIAELR 398

Query: 363 HGDLFHSPNIVSSIEFDRDDEFFATAGVSRCIKVFEFSSYLLFP 406
           HGDLFHS NIVSSIEFDRDDEFFATAGVSRCIKVFEFSS +  P
Sbjct: 399 HGDLFHSANIVSSIEFDRDDEFFATAGVSRCIKVFEFSSVVNEP 439

[Close]

BLAST of Cucsat.G21587.T2 vs. ExPASy TrEMBL
Match: A0A5D3CLL8 (E3 ubiquitin-protein ligase COP1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold302G00900 PE=4 SV=1)

HSP 1 Score: 723 bits (1865), Expect = 4.53e-256
Identity = 379/434 (87.33%), Postives = 386/434 (88.94%), Query Frame = 0


Query: 3   PSPPPSDLMPPQFQPDAANAAAPTPTPTPTTAPSHSNTDDLDKDMLCPICMQIIKDAFLT 62
           P PPPSDLMP QF P+ ANAAA T  PTPT A SHS+TDDLDKDMLCPICMQIIKDAFLT
Sbjct: 39  PPPPPSDLMP-QFLPEDANAAAAT--PTPTAAASHSDTDDLDKDMLCPICMQIIKDAFLT 98

Query: 63  TCGHSFCYMCIVTHLRNKSDCPCCAHFLRSNSIFPNILLDK------------------- 122
           TCGHSFCYMCIVTHLRNKSDCPCCAHFLRS SIFPNILLDK                   
Sbjct: 99  TCGHSFCYMCIVTHLRNKSDCPCCAHFLRSTSIFPNILLDKITNRMQCSFKAQGAIKRNC 158

Query: 123 -----------LLKKTSARQIKKTASPFGYLQQALQKGCDMSIKDLEELLTLLTEKKRKM 182
                      LLKKTSARQIKKT SPFGYLQQALQKGCDM+IKDLEELLTLL EKKRKM
Sbjct: 159 LLGLKRKMQKKLLKKTSARQIKKTTSPFGYLQQALQKGCDMTIKDLEELLTLLAEKKRKM 218

Query: 183 EQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLELYRSKERYSG 242
           EQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLEL+RSKERYSG
Sbjct: 219 EQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLELHRSKERYSG 278

Query: 243 KMKMLADDTVSTKSRSSLIDKHGNGINSGAQRSQGWMSSGNSPNPRADAKIQLSSQGPLR 302
           KMKMLADDTVSTKSRSSLIDKHGNGINSG QRSQGWMSSGNSPNPRADAKIQLSSQGPLR
Sbjct: 279 KMKMLADDTVSTKSRSSLIDKHGNGINSGVQRSQGWMSSGNSPNPRADAKIQLSSQGPLR 338

Query: 303 KDAYCSSDLHSVAQSGLTVANKRRVHTQFNELQDCYLQKRRNWRKQLYKQEDRDIKFSGG 362
           KDAYCSSDLHS+AQSGLTVANKRRVHTQFNELQDCYLQKRRNWRKQLYKQEDRDIKFSGG
Sbjct: 339 KDAYCSSDLHSIAQSGLTVANKRRVHTQFNELQDCYLQKRRNWRKQLYKQEDRDIKFSGG 398

Query: 363 ESYNPSLEDFQSVLTSFMRYSRLRVIAELPHGDLFHSPNIVSSIEFDRDDEFFATAGVSR 406
           ESYNP+LEDFQSVLTSFMRYSRLRVIAEL HGDLFHS NIVSSIEFDRDDEFFATAGVSR
Sbjct: 399 ESYNPALEDFQSVLTSFMRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDEFFATAGVSR 458

[Close]

BLAST of Cucsat.G21587.T2 vs. ExPASy TrEMBL
Match: A0A6J1CL47 (E3 ubiquitin-protein ligase COP1-like OS=Momordica charantia OX=3673 GN=LOC111012608 PE=4 SV=1)

HSP 1 Score: 689 bits (1777), Expect = 2.53e-243
Identity = 359/422 (85.07%), Postives = 372/422 (88.15%), Query Frame = 0


Query: 2   SPSPPPSDLMPPQFQPDAANAAAPTPTPTPTTAPSHSNTDDLDKDMLCPICMQIIKDAFL 61
           +P PPP  L PP   P  A AA         TA S +N++DLDKDMLCPICMQIIKDAFL
Sbjct: 24  APPPPPPPLPPPPPPPPEAMAAELEAGELNATA-SEANSEDLDKDMLCPICMQIIKDAFL 83

Query: 62  TTCGHSFCYMCIVTHLRNKSDCPCCAHFLRSNSIFPNILLDKLLKKTSARQIKKTASPFG 121
           TTCGHSFCYMCIVTHLRNKSDCPCC HFLRSNSIFPNILLDKLLKKTSARQIKKT SPFG
Sbjct: 84  TTCGHSFCYMCIVTHLRNKSDCPCCGHFLRSNSIFPNILLDKLLKKTSARQIKKTTSPFG 143

Query: 122 YLQQALQKGCDMSIKDLEELLTLLTEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNE 181
           YL QALQKGCDMSIK+LEEL+TLL EKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNE
Sbjct: 144 YLHQALQKGCDMSIKELEELVTLLAEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNE 203

Query: 182 IQADLHYIKEDISSVEKQRLELYRSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINSG 241
           IQADLHYIKEDISSVEKQRLELYRSKERYSGKMKML DDTVSTKSRSSLIDKHGNGIN G
Sbjct: 204 IQADLHYIKEDISSVEKQRLELYRSKERYSGKMKMLVDDTVSTKSRSSLIDKHGNGINCG 263

Query: 242 AQRSQGWMSSGNSPNPRADAKIQLSSQGPLRKDAYCSSDLHSVAQSGLTVANKRRVHTQF 301
            QRSQGWMSSGNS NPRAD KIQL SQGPLRKDAYC SDLHSVAQSGL VANKRRVHTQF
Sbjct: 264 TQRSQGWMSSGNSANPRADVKIQLGSQGPLRKDAYCGSDLHSVAQSGLAVANKRRVHTQF 323

Query: 302 NELQDCYLQKRRNWRKQLYKQEDRDIKFSGGESYNPSLEDFQSVLTSFMRYSRLRVIAEL 361
           NELQDCYLQKRRNWRKQLYKQEDRD KF+ GESYNP+L+DFQSVLTSFMRYSRLRVIAEL
Sbjct: 324 NELQDCYLQKRRNWRKQLYKQEDRDTKFNSGESYNPALDDFQSVLTSFMRYSRLRVIAEL 383

Query: 362 PHGDLFHSPNIVSSIEFDRDDEFFATAGVSRCIKVFEFSSYLL------FPGGKRTSRCS 417
            HGDLFHS NIVSSIEFDRDDEFFATAGVSRCIKVFEFSS +       FP  + ++R  
Sbjct: 384 RHGDLFHSANIVSSIEFDRDDEFFATAGVSRCIKVFEFSSVVNEPTDVHFPAVEMSTRSK 443

The following BLAST results are available for this feature:

BLAST of Cucsat.G21587.T2 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P93471	6.7e-123	59.40	E3 ubiquitin-protein ligase COP1 OS=Pisum sativum OX=3888 GN=COP1 PE=2 SV=1	[more]
P43254	2.2e-121	57.07	E3 ubiquitin-protein ligase COP1 OS=Arabidopsis thaliana OX=3702 GN=COP1 PE=1 SV...	[more]
Q8NHY2	2.4e-35	30.29	E3 ubiquitin-protein ligase COP1 OS=Homo sapiens OX=9606 GN=COP1 PE=1 SV=1	[more]
Q9R1A8	3.1e-35	30.29	E3 ubiquitin-protein ligase COP1 OS=Mus musculus OX=10090 GN=Cop1 PE=1 SV=2	[more]
Q9SYX2	5.0e-09	24.14	Protein SUPPRESSOR OF PHYA-105 1 OS=Arabidopsis thaliana OX=3702 GN=SPA1 PE=1 SV...	[more]

BLAST of Cucsat.G21587.T2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004145465.3	3.87e-278	98.99	E3 ubiquitin-protein ligase COP1 isoform X1 [Cucumis sativus] >KAE8653640.1 hypo...	[more]
XP_008458987.1	1.97e-262	93.81	PREDICTED: E3 ubiquitin-protein ligase COP1-like [Cucumis melo] >KAA0043144.1 E3...	[more]
XP_038894733.1	1.27e-259	92.36	E3 ubiquitin-protein ligase COP1-like [Benincasa hispida]	[more]
XP_031735991.1	5.54e-258	95.84	E3 ubiquitin-protein ligase COP1 isoform X2 [Cucumis sativus]	[more]
TYK12320.1	9.36e-256	87.33	E3 ubiquitin-protein ligase COP1-like [Cucumis melo var. makuwa]	[more]

BLAST of Cucsat.G21587.T2 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LYH0	9.24e-283	98.52	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G699620 PE=4 SV=1	[more]
A0A5A7TIH5	9.52e-263	93.81	E3 ubiquitin-protein ligase COP1-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3C954	9.52e-263	93.81	E3 ubiquitin-protein ligase COP1-like OS=Cucumis melo OX=3656 GN=LOC103498239 PE...	[more]
A0A5D3CLL8	4.53e-256	87.33	E3 ubiquitin-protein ligase COP1-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A6J1CL47	2.53e-243	85.07	E3 ubiquitin-protein ligase COP1-like OS=Momordica charantia OX=3673 GN=LOC11101...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 135..162
None	No IPR available	PFAM	PF13923	zf-C3HC4_2	coord: 49..86 e-value: 2.1E-10 score: 40.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..38
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 230..261
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..40
None	No IPR available	PANTHER	PTHR44080:SF2	E3 UBIQUITIN-PROTEIN LIGASE COP1	coord: 29..402
None	No IPR available	CDD	cd16504	RING-HC_COP1	coord: 45..90 e-value: 4.53614E-21 score: 83.8469
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 41..107
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 49..86 e-value: 6.9E-7 score: 38.9
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 49..86 score: 11.987676
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 28..161 e-value: 1.4E-19 score: 72.0
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 340..425 e-value: 3.9E-17 score: 64.1
IPR042755	E3 ubiquitin-protein ligase COP1	PANTHER	PTHR44080	E3 UBIQUITIN-PROTEIN LIGASE COP1	coord: 29..402
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 64..73

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G21587	Cucsat.G21587	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G21587.T2.E1	Cucsat.G21587.T2.E1	exon
Cucsat.G21587.T2.E2	Cucsat.G21587.T2.E2	exon
Cucsat.G21587.T2.E3	Cucsat.G21587.T2.E3	exon
Cucsat.G21587.T2.E4	Cucsat.G21587.T2.E4	exon
Cucsat.G21587.T2.E5	Cucsat.G21587.T2.E5	exon
Cucsat.G21587.T2.E6	Cucsat.G21587.T2.E6	exon
Cucsat.G21587.T2.E7	Cucsat.G21587.T2.E7	exon
Cucsat.G21587.T2.E8	Cucsat.G21587.T2.E8	exon
Cucsat.G21587.T2.E9	Cucsat.G21587.T2.E9	exon
Cucsat.G21587.T2.E10	Cucsat.G21587.T2.E10	exon
Cucsat.G21587.T2.E11	Cucsat.G21587.T2.E11	exon
Cucsat.G21587.T2.E12	Cucsat.G21587.T2.E12	exon
Cucsat.G21587.T2.E13	Cucsat.G21587.T2.E13	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G21587.T2.C8	Cucsat.G21587.T2.C8	CDS
Cucsat.G21587.T2.C7	Cucsat.G21587.T2.C7	CDS
Cucsat.G21587.T2.C6	Cucsat.G21587.T2.C6	CDS
Cucsat.G21587.T2.C5	Cucsat.G21587.T2.C5	CDS
Cucsat.G21587.T2.C4	Cucsat.G21587.T2.C4	CDS
Cucsat.G21587.T2.C3	Cucsat.G21587.T2.C3	CDS
Cucsat.G21587.T2.C2	Cucsat.G21587.T2.C2	CDS
Cucsat.G21587.T2.C1	Cucsat.G21587.T2.C1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G21587.T2	Cucsat.G21587.T2-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process
biological_process	GO:0016567	protein ubiquitination
molecular_function	GO:0005515	protein binding
molecular_function	GO:0061630	ubiquitin protein ligase activity
molecular_function	GO:0046872	metal ion binding