Cucsat.G21389.T12 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G21389.T12
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	AT-hook motif nuclear-localized protein
Location	ctg910: 2347657 .. 2351272 (+)
RNA-Seq Expression	Cucsat.G21389.T12
Synteny	Cucsat.G21389.T12

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTGCTCAACTTGGAGGGATTTTTTGTTTCTGCAACTTAGTTTTTTTAAAAATGAAAATAGAGCTTTGTTTTGGTTCTATTGATGTTCGTGGCTAGTTAGTACTGTTATTCGTTGGGATGATTTGGGAACTGGGTTTTGGAGAGAAGTGTTTGGATTTTAAGATTATTACTTAGTGATTCTGTGAGAACTTCTTTTCTTGCTGGGTGGAGGATGTGGGTCCTCTGGTTTGGATTCTTTGATTAAGTTCTCGAAGCATATTGTTGTTCTGATTCTCAAAAGATTGAGAGCTTTCTAGGTTGGTCTGAGAATGTCGGAATCTTCTTGTTTTTTTAGTTCTTGTTTGAACTCTCTGTCTCTGTCTCTTTCTCTCATTTTGACTATTTTCTGATCCTGAAAACTCATGATTCGTTCACATCGAGAAAAGGGGTCTTCAATTTTTTTGTTCTGGTGTTGGGTTCTGATTTGATTTTTATTTCTTACCAGTTCATAGACTCCATGATCTTTCATTATCTTCAAATCTTTCTACATGGACCCAATTAAGTTTTTTCCATTACGTGCCTCTACTCAGCTCCAGTTTAATTCTCTCTTAGAGGTTTATGGATAGAAATCTCTAAATCTGTCACTTGATATGGAAGTTTTAGGATTCTGTAATGGTTGCAAAGATTCTTTTAATGTTGCCCACTTCAAATTTTTTTTTCTTTGAAGATTCATTCTGCTGCTAAATTACCAATCATTCAATCTAGTTTGTCGTTGTGTTACAATCCTGTCACTAAATCCGTCCTTCTCAGGTGACTGGGTTCCGTGTTCTCTTGGTGCAAATTTTACGCCTCATATCATCACTGTCAATGCGGGCGAGGTAAAATGTCAAGAACTTATCTTCTTCACATAAGTTGGGGTAAAACCTGCGGTAGAGTTTTTTCTTCTTCTTTTTTCATATGGTTGATCAATAAAGAGACTAATATTCTTTTTCTCTTCACGTCTAATCCATTTCTGAAGTGGAATTTATAGGGGGGAAATCAAATTTATGTAAATAACTGTGAGAATAGATGAAAGTCTTGAAGTTTGGTTGTTTCATTTAGTCACTATTTGCTCCACTCCAAATAGGTAGTTTTCAATTTGTTAAAACAAAAGTGACTTAAAACACTCGTTTCTATTGAACTATTCTTGTGGTAAGTGAGTTAAGGAGCTGAGTCTTGTGATGTAGGGAAGGAAAAGAAAAAAAAAACGGTAACAAATTACACTTTCATCCATCCTTTTCTCTCATGTGACCAAGTTTTTCCTGTTTTGTAGGATGTCACAATGAAGATAATATCCTTTTCTCAACAAGGGCCTCGAGCTATATGCATTTTATCTGCAAACGGTGTAATCTCAAGTGTCACTCTCCGCCAGCCTGACTCCTCTGGAGGAACACTAACTTATGAGGTGATGCATTTATTTTGCCCTCTAATGAAAAAATGCCTAATTGAATGGTAATTCGGTTGTGTATGAATTCATGGACTTTGCAATGGTCTTTCCCCGTCTATTGGCTCTTGCTACCATGCTTTAGGATCCAGTACATAAATAACATGCCATTATTAGTTCCTGACAAAATATCGAAATTAAAAATTCGAACATTATAGATAAGAACAATTTGTATACGCAGACATCTATATGAAGCAGTTCTGAGAAATAGTACCATATATATTAATTATGGTTCAGAAATTTTTAAGTTGAATATTATGGAGGCTAAATTGAAATTTAATGAGCATTTATTGTCTACTTTTCTTTTAAAATCATGGCTTTCCAATTCTTAACATTACCTTCCTAACCTTGCACTAGGACATCGACATATATTTTACTGTTTCCGTCCTGCTCGTTGGGTTAAACCATCCTCTCTCTAACCTTCACGCCAGTCATAGCTAGATAGCTCTTTATTATTTCTTTCAGTTATCAACTCCTATAGGTGAAATGACTTCCAAGCATGTCTCTCTTGAGTTATCACTTTCATTCCTCAACAAAGAACCTTCATTTAAAATTTTGTGTAATGTAGCTAAATTTGAATTCGCTGCTTTCTTTTTTCAATTTTGGAATCTTCGATCTGTTCTATTATGTTTATGTTGTTCAACTCAGGCGGTTCAGTCAAGATGCAATCAGCCAATCCTGTTTAAGAGTTGATTCATGGGAGTACACTGAATACCTTAATGTTTATCCACATGTTTTAGGCAGTAAAAACTTTGGTCATAAGAGGCTATAACTGACGGTTCCAAATAATGGAAAAGAAACTCATTCAAATAGTAGCTTTCTTGCATTTTTGTATTTTTTGCTTCAGCACTGTGTTTTGAGCATCAGGCTCATTCGTTATTTTAATGAAAGTCTTGTTTTCGTTGCAAAAAAAGAATAGTAGCTTTCTTAAGGATTGGTGGGGTATATTCTTCAGATACCTGGTCATTAAAATGAATTTGCTAGTAAATATTGATTACAATAAAAGTTTCCATTTTGATAGTTTCAATCAGTCCAGCATTGCATAATCATTATTTTTCAAGTAATGCTGAAAGATTTCCTTTTCATTTCTTAATGCACCAGGTTGTTCTGAAAACCTCAAAGTTTTGCTTCTGATCTATGCCAAGAAAATCTCTCTGATTAATTGACTACCTTATATAAAGATTGTTCTTCTCGCATACTTCTCTGCTAAAACGTGGTGGATAGAGGATCAAGTAGAGGATTAGGATGCATGTTTTTCATCCATTTGCAAAATATATCTCATATCGATATTTTTCTCATTTGGTTCACAGGGACGATTTGAAATACTTTCCCTGTCCGGCTCATTCATGCCTAGTGACAATGGAGCAACAAGAAGTAGATCTGGTGGAATGAGTGTTTCCTTAGCAAGTCCAGATGGGCGTGTAGTAGGCGGTGGAGTAGCTGGTCTATTAGTAGCTGCTAGTCCTGTTCAGGTATGGTCTTTCTTTGTTTCTTCCACGCAATCAGTGATCCATTATCGATATGGCCAGATTGTATTTACTTTGCAAACAAAAGCTATGGAAACTAAGATTTCGCTTATTACTGTCTTTGCAAAAATAGGTTGTAGTAGGGAGTTTTCTATCAGGAAATCAACATGAACAGAAACCGAAAAAGCCAAAACATGATACTATCTCACCGGCCCCGCCAACTGCTGCCATTCCAATATCTTGTGTCGATCCTAAGTCCAACCTGTCACCTTCCAGTTCCTTTCGAGGCGATAACTGGTCGATGCTGCCAACTGATTCGAGAAATAAGTCAACTGATATCAATGTATCACTACCCAGTGCTTGATTTTTGAGCTCCATAGCTTATTATGGAAGTCTCCTCTCTCCCATTTTGCCATCATCAAACTTATTAATTGGTGGATGTTTCACATCTTGTTTCATGATCTCTGTAACTTACCATTGTACTTCCTATATGTAGAATTTTAAACCCCCACACTACTCCTGTTGATTCTTCTCAATTAGTTTTTCACTTGGTAGAGTAGCTATAGGCTCCCCGATGCTACTGCGTCGAGCCGAGTAGAATAGTTTGATGTAATGTGAACGACTTTCACTTTTTGTTTCATATCAATGGATTGTGATTTTATGCTTCCTTCTTTTTGTCCTTATCAAC

Coding sequence (CDS)

ATGAAGATAATATCCTTTTCTCAACAAGGGCCTCGAGCTATATGCATTTTATCTGCAAACGGTGTAATCTCAAGTGTCACTCTCCGCCAGCCTGACTCCTCTGGAGGAACACTAACTTATGAGGGACGATTTGAAATACTTTCCCTGTCCGGCTCATTCATGCCTAGTGACAATGGAGCAACAAGAAGTAGATCTGGTGGAATGAGTGTTTCCTTAGCAAGTCCAGATGGGCGTGTAGTAGGCGGTGGAGTAGCTGGTCTATTAGTAGCTGCTAGTCCTGTTCAGGTTGTAGTAGGGAGTTTTCTATCAGGAAATCAACATGAACAGAAACCGAAAAAGCCAAAACATGATACTATCTCACCGGCCCCGCCAACTGCTGCCATTCCAATATCTTGTGTCGATCCTAAGTCCAACCTGTCACCTTCCAGTTCCTTTCGAGGCGATAACTGGTCGATGCTGCCAACTGATTCGAGAAATAAGTCAACTGATATCAATGTATCACTACCCAGTGCTTGA

Protein sequence

MKIISFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPSDNGATRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLSGNQHEQKPKKPKHDTISPAPPTAAIPISCVDPKSNLSPSSSFRGDNWSMLPTDSRNKSTDINVSLPSA

Homology

[Close]

BLAST of Cucsat.G21389.T12 vs. ExPASy Swiss-Prot
Match: Q8VYJ2 (AT-hook motif nuclear-localized protein 1 OS=Arabidopsis thaliana OX=3702 GN=AHL1 PE=1 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 2.6e-57
Identity = 127/172 (73.84%), Postives = 143/172 (83.14%), Query Frame = 0


Query: 1   MKIISFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPSDNGA 60
           MKIISFSQQGPR+IC+LSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMP+D+G 
Sbjct: 185 MKIISFSQQGPRSICVLSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPNDSGG 244

Query: 61  TRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLSGNQH-EQKPKKPKHDTI 120
           TRSR+GGMSVSLASPDGRVVGGG+AGLLVAASPVQVVVGSFL+G  H +QKPKK KHD +
Sbjct: 245 TRSRTGGMSVSLASPDGRVVGGGLAGLLVAASPVQVVVGSFLAGTDHQDQKPKKNKHDFM 304

Query: 121 SPAPPTAAIPISCVDPKSNLSPSSSFRGDN--W-SMLPTDSRNKSTDINVSL 169
             + PTAAIPIS       +   SS   +N  W + L +D RNK TDINV++
Sbjct: 305 L-SSPTAAIPISSAADHRTIHSVSSLPVNNNTWQTSLASDPRNKHTDINVNV 355

[Close]

BLAST of Cucsat.G21389.T12 vs. ExPASy Swiss-Prot
Match: Q4V3E0 (AT-hook motif nuclear-localized protein 7 OS=Arabidopsis thaliana OX=3702 GN=AHL7 PE=2 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 9.7e-49
Identity = 112/179 (62.57%), Postives = 133/179 (74.30%), Query Frame = 0


Query: 1   MKIISFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPSDNGA 60
           M+IISFSQQGPRAICILSANGVIS+VTLRQPDS GGTLTYEGRFEILSLSGSFM ++N  
Sbjct: 138 MRIISFSQQGPRAICILSANGVISNVTLRQPDSCGGTLTYEGRFEILSLSGSFMETENQG 197

Query: 61  TRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLSGNQHE-QKPKK------ 120
           ++ RSGGMSVSLA PDGRVVGGGVAGLL+AA+P+QVVVGSF++ +Q + QKP+K      
Sbjct: 198 SKGRSGGMSVSLAGPDGRVVGGGVAGLLIAATPIQVVVGSFITSDQQDHQKPRKQRVEHA 257

Query: 121 PKHDTISPAPPTAAIPISCVDPKSN---LSPSSSFRGDNWSMLPTDSRNKSTDINVSLP 170
           P      P PP+   P + V   +N     P SSF   +W+      RN +TDIN+SLP
Sbjct: 258 PAAVMSVPPPPSPPPPAASVFSPTNPDREQPPSSFGISSWTNGQDMPRNSATDINISLP 316

[Close]

BLAST of Cucsat.G21389.T12 vs. ExPASy Swiss-Prot
Match: O49658 (AT-hook motif nuclear-localized protein 2 OS=Arabidopsis thaliana OX=3702 GN=AHL2 PE=2 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 1.1e-47
Identity = 112/171 (65.50%), Postives = 134/171 (78.36%), Query Frame = 0


Query: 2   KIISFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPSDNGAT 61
           +IISFSQQG  AIC+L ANGV+SSVTLRQPDSSGGTLTYEGRFEILSLSG+FMPSD+  T
Sbjct: 166 RIISFSQQGSLAICVLCANGVVSSVTLRQPDSSGGTLTYEGRFEILSLSGTFMPSDSDGT 225

Query: 62  RSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLSG-NQHEQKPKKPKHDTI- 121
           RSR+GGMSVSLASPDGRVVGGGVAGLLVAA+P+QVVVG+FL G NQ EQ PK   H+ + 
Sbjct: 226 RSRTGGMSVSLASPDGRVVGGGVAGLLVAATPIQVVVGTFLGGTNQQEQTPKPHNHNFMS 285

Query: 122 SPAPPTAAIPISCVDPKSNLSPSSSFRGDNWS-MLPTDSRNK-STDINVSL 169
           SP  PT++   +  D ++    +SS     W+   P+DSR+K S D N++L
Sbjct: 286 SPLMPTSS---NVADHRTIRPMTSSLPISTWTPSFPSDSRHKHSHDFNITL 333

[Close]

BLAST of Cucsat.G21389.T12 vs. ExPASy Swiss-Prot
Match: Q9FHM5 (AT-hook motif nuclear-localized protein 4 OS=Arabidopsis thaliana OX=3702 GN=AHL4 PE=1 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 5.9e-38
Identity = 90/145 (62.07%), Postives = 110/145 (75.86%), Query Frame = 0


Query: 1   MKIISFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPSDNGA 60
           MKI++FSQQG RAICILSANG IS+VTLRQ  +SGGTLTYEG FEILSL+GSF+PS++G 
Sbjct: 193 MKIMTFSQQGSRAICILSANGPISNVTLRQSMTSGGTLTYEGHFEILSLTGSFIPSESGG 252

Query: 61  TRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLSG----NQHEQKPKKPKH 120
           TRSR+GGMSVSLA  DGRV GGG+AGL +AA PVQV+VGSF++G     Q +Q+ KK + 
Sbjct: 253 TRSRAGGMSVSLAGQDGRVFGGGLAGLFIAAGPVQVMVGSFIAGQEESQQQQQQIKKQRR 312

Query: 121 DTISPAPPTAAIPI----SCVDPKS 138
           + +     T A  I    S  DPK+
Sbjct: 313 ERLGIPTTTQASNISFGGSAEDPKA 337

[Close]

BLAST of Cucsat.G21389.T12 vs. ExPASy Swiss-Prot
Match: Q9LVB0 (AT-hook motif nuclear-localized protein 6 OS=Arabidopsis thaliana OX=3702 GN=AHL6 PE=2 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.3e-37
Identity = 81/129 (62.79%), Postives = 101/129 (78.29%), Query Frame = 0


Query: 1   MKIISFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPSDNGA 60
           MK++ +SQQG RAICILSA G IS+VTL QP ++GGTLTYEGRFEILSLSGSFMP++NG 
Sbjct: 175 MKVMPYSQQGSRAICILSATGSISNVTLGQPTNAGGTLTYEGRFEILSLSGSFMPTENGG 234

Query: 61  TRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLSGNQHEQKPKKPKHDTIS 120
           T+ R+GGMS+SLA P+G + GGG+AG+L+AA PVQVV+GSF+  +Q EQ  KK      +
Sbjct: 235 TKGRAGGMSISLAGPNGNIFGGGLAGMLIAAGPVQVVMGSFIVMHQAEQNQKKKPRVMEA 294

Query: 121 PAPPTAAIP 130
            APP    P
Sbjct: 295 FAPPQPQAP 303

[Close]

BLAST of Cucsat.G21389.T12 vs. NCBI nr
Match: XP_004147567.1 (AT-hook motif nuclear-localized protein 1 [Cucumis sativus] >KGN50187.1 hypothetical protein Csa_000512 [Cucumis sativus])

HSP 1 Score: 328 bits (842), Expect = 7.81e-111
Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 0


Query: 1   MKIISFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPSDNGA 60
           MKIISFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPSDNGA
Sbjct: 160 MKIISFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPSDNGA 219

Query: 61  TRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLSGNQHEQKPKKPKHDTIS 120
           TRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLSGNQHEQKPKKPKHDTIS
Sbjct: 220 TRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLSGNQHEQKPKKPKHDTIS 279

Query: 121 PAPPTAAIPISCVDPKSNLSPSSSFRGDNWSMLPTDSRNKSTDINVSLPSA 171
           PAPPTAAIPISCVDPKSNLSPSSSFRGDNWSMLPTDSRNKSTDINVSLPSA
Sbjct: 280 PAPPTAAIPISCVDPKSNLSPSSSFRGDNWSMLPTDSRNKSTDINVSLPSA 330

[Close]

BLAST of Cucsat.G21389.T12 vs. NCBI nr
Match: XP_038906607.1 (AT-hook motif nuclear-localized protein 1 [Benincasa hispida])

HSP 1 Score: 327 bits (838), Expect = 3.17e-110
Identity = 170/171 (99.42%), Postives = 170/171 (99.42%), Query Frame = 0


Query: 1   MKIISFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPSDNGA 60
           MKIISFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPSDNG 
Sbjct: 160 MKIISFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPSDNGG 219

Query: 61  TRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLSGNQHEQKPKKPKHDTIS 120
           TRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLSGNQHEQKPKKPKHDTIS
Sbjct: 220 TRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLSGNQHEQKPKKPKHDTIS 279

Query: 121 PAPPTAAIPISCVDPKSNLSPSSSFRGDNWSMLPTDSRNKSTDINVSLPSA 171
           PAPPTAAIPISCVDPKSNLSPSSSFRGDNWSMLPTDSRNKSTDINVSLPSA
Sbjct: 280 PAPPTAAIPISCVDPKSNLSPSSSFRGDNWSMLPTDSRNKSTDINVSLPSA 330

[Close]

BLAST of Cucsat.G21389.T12 vs. NCBI nr
Match: XP_008437162.1 (PREDICTED: AT-hook motif nuclear-localized protein 1 [Cucumis melo] >KAA0042841.1 AT-hook motif nuclear-localized protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 327 bits (838), Expect = 3.17e-110
Identity = 170/171 (99.42%), Postives = 170/171 (99.42%), Query Frame = 0


Query: 1   MKIISFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPSDNGA 60
           MKIISFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPSDNG 
Sbjct: 160 MKIISFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPSDNGG 219

Query: 61  TRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLSGNQHEQKPKKPKHDTIS 120
           TRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLSGNQHEQKPKKPKHDTIS
Sbjct: 220 TRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLSGNQHEQKPKKPKHDTIS 279

Query: 121 PAPPTAAIPISCVDPKSNLSPSSSFRGDNWSMLPTDSRNKSTDINVSLPSA 171
           PAPPTAAIPISCVDPKSNLSPSSSFRGDNWSMLPTDSRNKSTDINVSLPSA
Sbjct: 280 PAPPTAAIPISCVDPKSNLSPSSSFRGDNWSMLPTDSRNKSTDINVSLPSA 330

[Close]

BLAST of Cucsat.G21389.T12 vs. NCBI nr
Match: XP_022159830.1 (AT-hook motif nuclear-localized protein 1-like [Momordica charantia])

HSP 1 Score: 308 bits (790), Expect = 7.81e-103
Identity = 162/171 (94.74%), Postives = 164/171 (95.91%), Query Frame = 0


Query: 1   MKIISFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPSDNGA 60
           MKIISFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMP+DNG 
Sbjct: 167 MKIISFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPNDNGG 226

Query: 61  TRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLSGNQHEQKPKKPKHDTIS 120
           TRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLSGNQHEQK KK K DTIS
Sbjct: 227 TRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLSGNQHEQKTKKTKQDTIS 286

Query: 121 PAPPTAAIPISCVDPKSNLSPSSSFRGDNWSMLPTDSRNKSTDINVSLPSA 171
            APPTAAIPISCVDPKSNLSPSSSFRGDNWS+LP DSRNK TDINVSLPSA
Sbjct: 287 AAPPTAAIPISCVDPKSNLSPSSSFRGDNWSLLPNDSRNKPTDINVSLPSA 337

[Close]

BLAST of Cucsat.G21389.T12 vs. NCBI nr
Match: KAG7036094.1 (AT-hook motif nuclear-localized protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 305 bits (782), Expect = 2.46e-102
Identity = 161/171 (94.15%), Postives = 161/171 (94.15%), Query Frame = 0


Query: 1   MKIISFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPSDNGA 60
           MKIISFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPSDNG 
Sbjct: 117 MKIISFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPSDNGG 176

Query: 61  TRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLSGNQHEQKPKKPKHDTIS 120
           TR RSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLSGNQ EQ PKKPK DTIS
Sbjct: 177 TRGRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLSGNQQEQNPKKPKQDTIS 236

Query: 121 PAPPTAAIPISCVDPKSNLSPSSSFRGDNWSMLPTDSRNKSTDINVSLPSA 171
            A PTAAIPISCVDPKSNLSPSSSFRGDNWSMLP DSRNK TDINV LPSA
Sbjct: 237 TASPTAAIPISCVDPKSNLSPSSSFRGDNWSMLPNDSRNKPTDINVPLPSA 287

[Close]

BLAST of Cucsat.G21389.T12 vs. ExPASy TrEMBL
Match: A0A0A0KP42 (AT-hook motif nuclear-localized protein OS=Cucumis sativus OX=3659 GN=Csa_5G157940 PE=4 SV=1)

HSP 1 Score: 328 bits (842), Expect = 3.78e-111
Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 0


Query: 1   MKIISFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPSDNGA 60
           MKIISFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPSDNGA
Sbjct: 160 MKIISFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPSDNGA 219

Query: 61  TRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLSGNQHEQKPKKPKHDTIS 120
           TRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLSGNQHEQKPKKPKHDTIS
Sbjct: 220 TRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLSGNQHEQKPKKPKHDTIS 279

Query: 121 PAPPTAAIPISCVDPKSNLSPSSSFRGDNWSMLPTDSRNKSTDINVSLPSA 171
           PAPPTAAIPISCVDPKSNLSPSSSFRGDNWSMLPTDSRNKSTDINVSLPSA
Sbjct: 280 PAPPTAAIPISCVDPKSNLSPSSSFRGDNWSMLPTDSRNKSTDINVSLPSA 330

[Close]

BLAST of Cucsat.G21389.T12 vs. ExPASy TrEMBL
Match: A0A5A7TMP3 (AT-hook motif nuclear-localized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G003500 PE=4 SV=1)

HSP 1 Score: 327 bits (838), Expect = 1.53e-110
Identity = 170/171 (99.42%), Postives = 170/171 (99.42%), Query Frame = 0


Query: 1   MKIISFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPSDNGA 60
           MKIISFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPSDNG 
Sbjct: 160 MKIISFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPSDNGG 219

Query: 61  TRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLSGNQHEQKPKKPKHDTIS 120
           TRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLSGNQHEQKPKKPKHDTIS
Sbjct: 220 TRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLSGNQHEQKPKKPKHDTIS 279

Query: 121 PAPPTAAIPISCVDPKSNLSPSSSFRGDNWSMLPTDSRNKSTDINVSLPSA 171
           PAPPTAAIPISCVDPKSNLSPSSSFRGDNWSMLPTDSRNKSTDINVSLPSA
Sbjct: 280 PAPPTAAIPISCVDPKSNLSPSSSFRGDNWSMLPTDSRNKSTDINVSLPSA 330

[Close]

BLAST of Cucsat.G21389.T12 vs. ExPASy TrEMBL
Match: A0A1S3ATC1 (AT-hook motif nuclear-localized protein OS=Cucumis melo OX=3656 GN=LOC103482669 PE=4 SV=1)

HSP 1 Score: 327 bits (838), Expect = 1.53e-110
Identity = 170/171 (99.42%), Postives = 170/171 (99.42%), Query Frame = 0


Query: 1   MKIISFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPSDNGA 60
           MKIISFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPSDNG 
Sbjct: 160 MKIISFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPSDNGG 219

Query: 61  TRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLSGNQHEQKPKKPKHDTIS 120
           TRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLSGNQHEQKPKKPKHDTIS
Sbjct: 220 TRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLSGNQHEQKPKKPKHDTIS 279

Query: 121 PAPPTAAIPISCVDPKSNLSPSSSFRGDNWSMLPTDSRNKSTDINVSLPSA 171
           PAPPTAAIPISCVDPKSNLSPSSSFRGDNWSMLPTDSRNKSTDINVSLPSA
Sbjct: 280 PAPPTAAIPISCVDPKSNLSPSSSFRGDNWSMLPTDSRNKSTDINVSLPSA 330

[Close]

BLAST of Cucsat.G21389.T12 vs. ExPASy TrEMBL
Match: A0A6J1DZW0 (AT-hook motif nuclear-localized protein OS=Momordica charantia OX=3673 GN=LOC111026134 PE=4 SV=1)

HSP 1 Score: 308 bits (790), Expect = 3.78e-103
Identity = 162/171 (94.74%), Postives = 164/171 (95.91%), Query Frame = 0


Query: 1   MKIISFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPSDNGA 60
           MKIISFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMP+DNG 
Sbjct: 167 MKIISFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPNDNGG 226

Query: 61  TRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLSGNQHEQKPKKPKHDTIS 120
           TRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLSGNQHEQK KK K DTIS
Sbjct: 227 TRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLSGNQHEQKTKKTKQDTIS 286

Query: 121 PAPPTAAIPISCVDPKSNLSPSSSFRGDNWSMLPTDSRNKSTDINVSLPSA 171
            APPTAAIPISCVDPKSNLSPSSSFRGDNWS+LP DSRNK TDINVSLPSA
Sbjct: 287 AAPPTAAIPISCVDPKSNLSPSSSFRGDNWSLLPNDSRNKPTDINVSLPSA 337

[Close]

BLAST of Cucsat.G21389.T12 vs. ExPASy TrEMBL
Match: A0A6J1I241 (AT-hook motif nuclear-localized protein OS=Cucurbita maxima OX=3661 GN=LOC111468921 PE=4 SV=1)

HSP 1 Score: 307 bits (786), Expect = 1.26e-102
Identity = 163/172 (94.77%), Postives = 164/172 (95.35%), Query Frame = 0


Query: 1   MKIISFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPSDNGA 60
           MKIISFSQQGPRAIC+LSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPSDNG 
Sbjct: 160 MKIISFSQQGPRAICVLSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPSDNGG 219

Query: 61  TRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLSGNQHEQKPKKPKHDTIS 120
           TRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLSGNQHEQKPKKPK DT S
Sbjct: 220 TRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLSGNQHEQKPKKPKQDTNS 279

Query: 121 PAPPTAAIPISCVDPKSNLSPSSSFRGDNWSMLPTDSRN-KSTDINVSLPSA 171
            APPTAAIPISCVDPKSNLSPSS FRGDNWS LPTDSRN K TDINVSLPSA
Sbjct: 280 TAPPTAAIPISCVDPKSNLSPSSPFRGDNWSTLPTDSRNNKPTDINVSLPSA 331

The following BLAST results are available for this feature:

BLAST of Cucsat.G21389.T12 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VYJ2	2.6e-57	73.84	AT-hook motif nuclear-localized protein 1 OS=Arabidopsis thaliana OX=3702 GN=AHL...	[more]
Q4V3E0	9.7e-49	62.57	AT-hook motif nuclear-localized protein 7 OS=Arabidopsis thaliana OX=3702 GN=AHL...	[more]
O49658	1.1e-47	65.50	AT-hook motif nuclear-localized protein 2 OS=Arabidopsis thaliana OX=3702 GN=AHL...	[more]
Q9FHM5	5.9e-38	62.07	AT-hook motif nuclear-localized protein 4 OS=Arabidopsis thaliana OX=3702 GN=AHL...	[more]
Q9LVB0	1.3e-37	62.79	AT-hook motif nuclear-localized protein 6 OS=Arabidopsis thaliana OX=3702 GN=AHL...	[more]

BLAST of Cucsat.G21389.T12 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147567.1	7.81e-111	100.00	AT-hook motif nuclear-localized protein 1 [Cucumis sativus] >KGN50187.1 hypothet...	[more]
XP_038906607.1	3.17e-110	99.42	AT-hook motif nuclear-localized protein 1 [Benincasa hispida]	[more]
XP_008437162.1	3.17e-110	99.42	PREDICTED: AT-hook motif nuclear-localized protein 1 [Cucumis melo] >KAA0042841....	[more]
XP_022159830.1	7.81e-103	94.74	AT-hook motif nuclear-localized protein 1-like [Momordica charantia]	[more]
KAG7036094.1	2.46e-102	94.15	AT-hook motif nuclear-localized protein 1, partial [Cucurbita argyrosperma subsp...	[more]

BLAST of Cucsat.G21389.T12 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KP42	3.78e-111	100.00	AT-hook motif nuclear-localized protein OS=Cucumis sativus OX=3659 GN=Csa_5G1579...	[more]
A0A5A7TMP3	1.53e-110	99.42	AT-hook motif nuclear-localized protein OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A1S3ATC1	1.53e-110	99.42	AT-hook motif nuclear-localized protein OS=Cucumis melo OX=3656 GN=LOC103482669 ...	[more]
A0A6J1DZW0	3.78e-103	94.74	AT-hook motif nuclear-localized protein OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A6J1I241	1.26e-102	94.77	AT-hook motif nuclear-localized protein OS=Cucurbita maxima OX=3661 GN=LOC111468...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005175	PPC domain	PFAM	PF03479	PCC	coord: 2..101 e-value: 2.7E-23 score: 82.5
IPR005175	PPC domain	PROSITE	PS51742	PPC	coord: 1..122 score: 35.84333
IPR005175	PPC domain	CDD	cd11378	DUF296	coord: 2..78 e-value: 4.36158E-22 score: 83.789
None	No IPR available	GENE3D	3.30.1330.80		coord: 1..118 e-value: 1.1E-25 score: 92.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 135..171
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 105..171
None	No IPR available	PANTHER	PTHR31500:SF18	AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 3	coord: 1..169
None	No IPR available	SUPERFAMILY	117856	AF0104/ALDC/Ptd012-like	coord: 3..107
IPR039605	AT-hook motif nuclear-localized protein	PANTHER	PTHR31500	AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9	coord: 1..169

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G21389	Cucsat.G21389	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G21389.T12.E1	Cucsat.G21389.T12.E1	exon
Cucsat.G21389.T12.E2	Cucsat.G21389.T12.E2	exon
Cucsat.G21389.T12.E3	Cucsat.G21389.T12.E3	exon
Cucsat.G21389.T12.E4	Cucsat.G21389.T12.E4	exon
Cucsat.G21389.T12.E5	Cucsat.G21389.T12.E5	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G21389.T12.C1	Cucsat.G21389.T12.C1	CDS
Cucsat.G21389.T12.C2	Cucsat.G21389.T12.C2	CDS
Cucsat.G21389.T12.C3	Cucsat.G21389.T12.C3	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G21389.T12	Cucsat.G21389.T12-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003680	minor groove of adenine-thymine-rich DNA binding