Cucsat.G21389.T12 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TCTGCTCAACTTGGAGGGATTTTTTGTTTCTGCAACTTAGTTTTTTTAAAAATGAAAATAGAGCTTTGTTTTGGTTCTATTGATGTTCGTGGCTAGTTAGTACTGTTATTCGTTGGGATGATTTGGGAACTGGGTTTTGGAGAGAAGTGTTTGGATTTTAAGATTATTACTTAGTGATTCTGTGAGAACTTCTTTTCTTGCTGGGTGGAGGATGTGGGTCCTCTGGTTTGGATTCTTTGATTAAGTTCTCGAAGCATATTGTTGTTCTGATTCTCAAAAGATTGAGAGCTTTCTAGGTTGGTCTGAGAATGTCGGAATCTTCTTGTTTTTTTAGTTCTTGTTTGAACTCTCTGTCTCTGTCTCTTTCTCTCATTTTGACTATTTTCTGATCCTGAAAACTCATGATTCGTTCACATCGAGAAAAGGGGTCTTCAATTTTTTTGTTCTGGTGTTGGGTTCTGATTTGATTTTTATTTCTTACCAGTTCATAGACTCCATGATCTTTCATTATCTTCAAATCTTTCTACATGGACCCAATTAAGTTTTTTCCATTACGTGCCTCTACTCAGCTCCAGTTTAATTCTCTCTTAGAGGTTTATGGATAGAAATCTCTAAATCTGTCACTTGATATGGAAGTTTTAGGATTCTGTAATGGTTGCAAAGATTCTTTTAATGTTGCCCACTTCAAATTTTTTTTTCTTTGAAGATTCATTCTGCTGCTAAATTACCAATCATTCAATCTAGTTTGTCGTTGTGTTACAATCCTGTCACTAAATCCGTCCTTCTCAGGTGACTGGGTTCCGTGTTCTCTTGGTGCAAATTTTACGCCTCATATCATCACTGTCAATGCGGGCGAGGTAAAATGTCAAGAACTTATCTTCTTCACATAAGTTGGGGTAAAACCTGCGGTAGAGTTTTTTCTTCTTCTTTTTTCATATGGTTGATCAATAAAGAGACTAATATTCTTTTTCTCTTCACGTCTAATCCATTTCTGAAGTGGAATTTATAGGGGGGAAATCAAATTTATGTAAATAACTGTGAGAATAGATGAAAGTCTTGAAGTTTGGTTGTTTCATTTAGTCACTATTTGCTCCACTCCAAATAGGTAGTTTTCAATTTGTTAAAACAAAAGTGACTTAAAACACTCGTTTCTATTGAACTATTCTTGTGGTAAGTGAGTTAAGGAGCTGAGTCTTGTGATGTAGGGAAGGAAAAGAAAAAAAAAACGGTAACAAATTACACTTTCATCCATCCTTTTCTCTCATGTGACCAAGTTTTTCCTGTTTTGTAGGATGTCACAATGAAGATAATATCCTTTTCTCAACAAGGGCCTCGAGCTATATGCATTTTATCTGCAAACGGTGTAATCTCAAGTGTCACTCTCCGCCAGCCTGACTCCTCTGGAGGAACACTAACTTATGAGGTGATGCATTTATTTTGCCCTCTAATGAAAAAATGCCTAATTGAATGGTAATTCGGTTGTGTATGAATTCATGGACTTTGCAATGGTCTTTCCCCGTCTATTGGCTCTTGCTACCATGCTTTAGGATCCAGTACATAAATAACATGCCATTATTAGTTCCTGACAAAATATCGAAATTAAAAATTCGAACATTATAGATAAGAACAATTTGTATACGCAGACATCTATATGAAGCAGTTCTGAGAAATAGTACCATATATATTAATTATGGTTCAGAAATTTTTAAGTTGAATATTATGGAGGCTAAATTGAAATTTAATGAGCATTTATTGTCTACTTTTCTTTTAAAATCATGGCTTTCCAATTCTTAACATTACCTTCCTAACCTTGCACTAGGACATCGACATATATTTTACTGTTTCCGTCCTGCTCGTTGGGTTAAACCATCCTCTCTCTAACCTTCACGCCAGTCATAGCTAGATAGCTCTTTATTATTTCTTTCAGTTATCAACTCCTATAGGTGAAATGACTTCCAAGCATGTCTCTCTTGAGTTATCACTTTCATTCCTCAACAAAGAACCTTCATTTAAAATTTTGTGTAATGTAGCTAAATTTGAATTCGCTGCTTTCTTTTTTCAATTTTGGAATCTTCGATCTGTTCTATTATGTTTATGTTGTTCAACTCAGGCGGTTCAGTCAAGATGCAATCAGCCAATCCTGTTTAAGAGTTGATTCATGGGAGTACACTGAATACCTTAATGTTTATCCACATGTTTTAGGCAGTAAAAACTTTGGTCATAAGAGGCTATAACTGACGGTTCCAAATAATGGAAAAGAAACTCATTCAAATAGTAGCTTTCTTGCATTTTTGTATTTTTTGCTTCAGCACTGTGTTTTGAGCATCAGGCTCATTCGTTATTTTAATGAAAGTCTTGTTTTCGTTGCAAAAAAAGAATAGTAGCTTTCTTAAGGATTGGTGGGGTATATTCTTCAGATACCTGGTCATTAAAATGAATTTGCTAGTAAATATTGATTACAATAAAAGTTTCCATTTTGATAGTTTCAATCAGTCCAGCATTGCATAATCATTATTTTTCAAGTAATGCTGAAAGATTTCCTTTTCATTTCTTAATGCACCAGGTTGTTCTGAAAACCTCAAAGTTTTGCTTCTGATCTATGCCAAGAAAATCTCTCTGATTAATTGACTACCTTATATAAAGATTGTTCTTCTCGCATACTTCTCTGCTAAAACGTGGTGGATAGAGGATCAAGTAGAGGATTAGGATGCATGTTTTTCATCCATTTGCAAAATATATCTCATATCGATATTTTTCTCATTTGGTTCACAGGGACGATTTGAAATACTTTCCCTGTCCGGCTCATTCATGCCTAGTGACAATGGAGCAACAAGAAGTAGATCTGGTGGAATGAGTGTTTCCTTAGCAAGTCCAGATGGGCGTGTAGTAGGCGGTGGAGTAGCTGGTCTATTAGTAGCTGCTAGTCCTGTTCAGGTATGGTCTTTCTTTGTTTCTTCCACGCAATCAGTGATCCATTATCGATATGGCCAGATTGTATTTACTTTGCAAACAAAAGCTATGGAAACTAAGATTTCGCTTATTACTGTCTTTGCAAAAATAGGTTGTAGTAGGGAGTTTTCTATCAGGAAATCAACATGAACAGAAACCGAAAAAGCCAAAACATGATACTATCTCACCGGCCCCGCCAACTGCTGCCATTCCAATATCTTGTGTCGATCCTAAGTCCAACCTGTCACCTTCCAGTTCCTTTCGAGGCGATAACTGGTCGATGCTGCCAACTGATTCGAGAAATAAGTCAACTGATATCAATGTATCACTACCCAGTGCTTGATTTTTGAGCTCCATAGCTTATTATGGAAGTCTCCTCTCTCCCATTTTGCCATCATCAAACTTATTAATTGGTGGATGTTTCACATCTTGTTTCATGATCTCTGTAACTTACCATTGTACTTCCTATATGTAGAATTTTAAACCCCCACACTACTCCTGTTGATTCTTCTCAATTAGTTTTTCACTTGGTAGAGTAGCTATAGGCTCCCCGATGCTACTGCGTCGAGCCGAGTAGAATAGTTTGATGTAATGTGAACGACTTTCACTTTTTGTTTCATATCAATGGATTGTGATTTTATGCTTCCTTCTTTTTGTCCTTATCAAC ATGAAGATAATATCCTTTTCTCAACAAGGGCCTCGAGCTATATGCATTTTATCTGCAAACGGTGTAATCTCAAGTGTCACTCTCCGCCAGCCTGACTCCTCTGGAGGAACACTAACTTATGAGGGACGATTTGAAATACTTTCCCTGTCCGGCTCATTCATGCCTAGTGACAATGGAGCAACAAGAAGTAGATCTGGTGGAATGAGTGTTTCCTTAGCAAGTCCAGATGGGCGTGTAGTAGGCGGTGGAGTAGCTGGTCTATTAGTAGCTGCTAGTCCTGTTCAGGTTGTAGTAGGGAGTTTTCTATCAGGAAATCAACATGAACAGAAACCGAAAAAGCCAAAACATGATACTATCTCACCGGCCCCGCCAACTGCTGCCATTCCAATATCTTGTGTCGATCCTAAGTCCAACCTGTCACCTTCCAGTTCCTTTCGAGGCGATAACTGGTCGATGCTGCCAACTGATTCGAGAAATAAGTCAACTGATATCAATGTATCACTACCCAGTGCTTGA MKIISFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPSDNGATRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLSGNQHEQKPKKPKHDTISPAPPTAAIPISCVDPKSNLSPSSSFRGDNWSMLPTDSRNKSTDINVSLPSA Homology
BLAST of Cucsat.G21389.T12 vs. ExPASy Swiss-Prot
Match: Q8VYJ2 (AT-hook motif nuclear-localized protein 1 OS=Arabidopsis thaliana OX=3702 GN=AHL1 PE=1 SV=1) HSP 1 Score: 223.0 bits (567), Expect = 2.6e-57 Identity = 127/172 (73.84%), Postives = 143/172 (83.14%), Query Frame = 0
BLAST of Cucsat.G21389.T12 vs. ExPASy Swiss-Prot
Match: Q4V3E0 (AT-hook motif nuclear-localized protein 7 OS=Arabidopsis thaliana OX=3702 GN=AHL7 PE=2 SV=1) HSP 1 Score: 194.5 bits (493), Expect = 9.7e-49 Identity = 112/179 (62.57%), Postives = 133/179 (74.30%), Query Frame = 0
BLAST of Cucsat.G21389.T12 vs. ExPASy Swiss-Prot
Match: O49658 (AT-hook motif nuclear-localized protein 2 OS=Arabidopsis thaliana OX=3702 GN=AHL2 PE=2 SV=1) HSP 1 Score: 191.0 bits (484), Expect = 1.1e-47 Identity = 112/171 (65.50%), Postives = 134/171 (78.36%), Query Frame = 0
BLAST of Cucsat.G21389.T12 vs. ExPASy Swiss-Prot
Match: Q9FHM5 (AT-hook motif nuclear-localized protein 4 OS=Arabidopsis thaliana OX=3702 GN=AHL4 PE=1 SV=1) HSP 1 Score: 158.7 bits (400), Expect = 5.9e-38 Identity = 90/145 (62.07%), Postives = 110/145 (75.86%), Query Frame = 0
BLAST of Cucsat.G21389.T12 vs. ExPASy Swiss-Prot
Match: Q9LVB0 (AT-hook motif nuclear-localized protein 6 OS=Arabidopsis thaliana OX=3702 GN=AHL6 PE=2 SV=1) HSP 1 Score: 157.5 bits (397), Expect = 1.3e-37 Identity = 81/129 (62.79%), Postives = 101/129 (78.29%), Query Frame = 0
BLAST of Cucsat.G21389.T12 vs. NCBI nr
Match: XP_004147567.1 (AT-hook motif nuclear-localized protein 1 [Cucumis sativus] >KGN50187.1 hypothetical protein Csa_000512 [Cucumis sativus]) HSP 1 Score: 328 bits (842), Expect = 7.81e-111 Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 0
BLAST of Cucsat.G21389.T12 vs. NCBI nr
Match: XP_038906607.1 (AT-hook motif nuclear-localized protein 1 [Benincasa hispida]) HSP 1 Score: 327 bits (838), Expect = 3.17e-110 Identity = 170/171 (99.42%), Postives = 170/171 (99.42%), Query Frame = 0
BLAST of Cucsat.G21389.T12 vs. NCBI nr
Match: XP_008437162.1 (PREDICTED: AT-hook motif nuclear-localized protein 1 [Cucumis melo] >KAA0042841.1 AT-hook motif nuclear-localized protein 1 [Cucumis melo var. makuwa]) HSP 1 Score: 327 bits (838), Expect = 3.17e-110 Identity = 170/171 (99.42%), Postives = 170/171 (99.42%), Query Frame = 0
BLAST of Cucsat.G21389.T12 vs. NCBI nr
Match: XP_022159830.1 (AT-hook motif nuclear-localized protein 1-like [Momordica charantia]) HSP 1 Score: 308 bits (790), Expect = 7.81e-103 Identity = 162/171 (94.74%), Postives = 164/171 (95.91%), Query Frame = 0
BLAST of Cucsat.G21389.T12 vs. NCBI nr
Match: KAG7036094.1 (AT-hook motif nuclear-localized protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 305 bits (782), Expect = 2.46e-102 Identity = 161/171 (94.15%), Postives = 161/171 (94.15%), Query Frame = 0
BLAST of Cucsat.G21389.T12 vs. ExPASy TrEMBL
Match: A0A0A0KP42 (AT-hook motif nuclear-localized protein OS=Cucumis sativus OX=3659 GN=Csa_5G157940 PE=4 SV=1) HSP 1 Score: 328 bits (842), Expect = 3.78e-111 Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 0
BLAST of Cucsat.G21389.T12 vs. ExPASy TrEMBL
Match: A0A5A7TMP3 (AT-hook motif nuclear-localized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G003500 PE=4 SV=1) HSP 1 Score: 327 bits (838), Expect = 1.53e-110 Identity = 170/171 (99.42%), Postives = 170/171 (99.42%), Query Frame = 0
BLAST of Cucsat.G21389.T12 vs. ExPASy TrEMBL
Match: A0A1S3ATC1 (AT-hook motif nuclear-localized protein OS=Cucumis melo OX=3656 GN=LOC103482669 PE=4 SV=1) HSP 1 Score: 327 bits (838), Expect = 1.53e-110 Identity = 170/171 (99.42%), Postives = 170/171 (99.42%), Query Frame = 0
BLAST of Cucsat.G21389.T12 vs. ExPASy TrEMBL
Match: A0A6J1DZW0 (AT-hook motif nuclear-localized protein OS=Momordica charantia OX=3673 GN=LOC111026134 PE=4 SV=1) HSP 1 Score: 308 bits (790), Expect = 3.78e-103 Identity = 162/171 (94.74%), Postives = 164/171 (95.91%), Query Frame = 0
BLAST of Cucsat.G21389.T12 vs. ExPASy TrEMBL
Match: A0A6J1I241 (AT-hook motif nuclear-localized protein OS=Cucurbita maxima OX=3661 GN=LOC111468921 PE=4 SV=1) HSP 1 Score: 307 bits (786), Expect = 1.26e-102 Identity = 163/172 (94.77%), Postives = 164/172 (95.35%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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