Cucsat.G21124.T3 (mRNA) Cucumber (B10) v3

Overview
NameCucsat.G21124.T3
TypemRNA
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Descriptionhomeobox protein knotted-1-like 7
Locationctg910: 2115878 .. 2120183 (-)
RNA-Seq ExpressionCucsat.G21124.T3
SyntenyCucsat.G21124.T3
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGTCCAAAAAAAGAAAAAGAAAGAAAAGAAAGAAAAAAAGGAATTGAAAAGTGTCAGGGATTGGGCATAGAAGAGCAGCTTTATCTCCCTTTCCTAGTAATGATTCCGTAGCTCTCTTTTATCAATGCTCCTTTACCTCTTACCCTTAATACAAAACAAATTCTCTCTCTCTCTCTCTTTCTTTCTTTATTTCTTCCTTCTTCTTCTTCCCTTCCTTCCTTTTCTCTGTTTGTAAAATTTTCTGAAATTCTCAGACCTGGTGCAGAAAGTTTTGTGTCTCGGATCCCTATATACTCTTCTCTCTCTTTCTTCTTCATTTCACACCATTAACGAGAAAACTGACTCTTCTCTATCAACATATTCATTCAAAACTAAATCCCAACAAACCCTTTTTTTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAATCACCAATTTCACTATTTGGGCTCACTCATTTCTTCTTTTTTCCTTCTTTACTTTCTAATTTACCTTTTTCTACACAACCCCTTTTTGCTTTTTTCTGCTAATTTTAACTTGGGTTTTTCGAGGGGTTCATTTGAAATGCAAGAACCTGGGTTGGGAATGATGACTGCTGCAGGTGGGTCTAGTGGTGGCTTAAGCGGCGACGTTTCGGTTTCCGGCGAGGGAGTTCATAACAGTCAACTGAAAGCGGAGATTGCTACTCATCCACTTTATGAGCAGCTTCTTTCAGCTCATGTTGCTTGTCTTCGTGTTGCTACTCCGATTGATCAGCTTCCGATGATCGATGCCCAGCTTTCTCAATCCCACCATATTTTGCGCTCTTATGCTTCTTCTCAAACAGCATCACCAAAATGCTCATTCCTTAACGCCTCACGAGCGACAAGAGCTTGACAATTTTCTGGTGATTTTTCTTTCTTTATTTATTTTAAAGAAAAGATTTAGTCGTATTTTGGAAAGTGGGTTGAACTTTGTTTTTTAATTTATGATGGGGTTTCTTTTCTTTTCTTTTCTTTTTTCAGGCACAGTATATGATCGTTTTGTGTTCTTTCAAAGAGCAGCTTCAACAACATGTGAGAGTCCACGCAGTTGAAGCTGTTATGGCTTGCCGTGAAATTGAAAACACTCTACAAGCTCTTACAGGTATGTACATCTAACTATCTCATCTCAATTCTTAACAAAAATCCCTTTAAAACAAGAAAAACAAAGATAAACCCATGATTTATCATCAGTTTTGAATGTGCATAAAAGTCTCGAAAATGTTACAGCATGAATATGTGCATGGTTTCTTTGTGTTATGAGTGTATAGAGATGTTAAAACAAAGGGGGGTTTTGTTTTGGTTTGAATTCGGGTCCAAATGAGGGTAAAAAAACAAACACCGGAGGATTTTTTGAAAGGGGTTTTTTTGTTTTGGGGGGTTTGAGGGATGAGGATTATGGTGAAAAGCAGCCATGGAAGTGGGTGCAAAAGAGGTCCCTACTTGTGAATACCAAGATTGTAGTTGGGAAAAGGATTGGTCTGTTGGGTTCGGTGAGGGTACCACCAATAGGGGACACCAACAGATAAGGTTGCTTGCCCCTGGCAATACTTGCGTTCCACTGTAAACAATAATAATATTCTCCCTATTATTATATTTCTTCATCTTTTTGCTTTGTAAAGATAGTACATGAACCTAGCTAGCTACTTCTTTTTCCTCTCTCTTTTTTCTTTCTATATATAAAAATAGACTAAAAGAGCTACACTTATCATATATGATTACATTAATCACCAACTGATCATTTTTAATCATTCAAGTGACCTAATATTTTTTTAGGATATGGATATACCCAACGACAAAGCTGTTATGTTTTTGTAAACTTAACTTGCAAATTTGGCTATGAGTTAGAAAGATTTAGAACTTATTGTATGTGGTTTATAAATAGAATTTAGTTCATTCTCACAGTTTGATAAAGTCCTCATGTTTAGTTTAACCGTGCTTTATTGTTCTAGTGAGATATTCTTATACACCACCTGATCCTACGGTGCTTTAGTATTTTATTAAAAGAAATCACTAATCCTAAGTTGGGACTATTAATGAGGTTTTATTTTTTTAATTTTATCACAACATAGAGACTAAATAAGATATTTTATTTTAGTTTTTTTTTTTAAATAAAAAAAGAGAAAAAAAAAACCTCTTTCATTGGTGAGTGAGTGACCTTTCTAGTTATATGATTTAACAAAACAATCTGGCGAATGAAAGGGTTACCACTCAAGCAGTTGATTGGATGGGTTAAAGAAACTAGGCATTTTATCATAAAGTAATCTGTTGCTTATTGATTGGGTTTGCCAGTTTTAGACCTGCCCTCCTATAACTACAACTACAATGGTCCCTATTCTCAATCTCCATACCTCCATGAAGTTCATGATCAGTTATTCTGTCTGTTTTAAATCATCTCTATTTTGAACCCTAGCATTGAGAATGCATAGAAACTATTCATTACTGCGTCTGCCAATGGATGCTGCTGAGGACCTAAGGGCTGTGGTGTAGGGTCTTAAATACCAATGCAAGCTTTTATATTAAGGACCCTAGGCCGCCTAAAGGGCATTGGAGGCTCATCCTGACAGTATTTAACTAAATGCTGCACTTTATGCGGCTTTTTTGGTCTGTTAAATTTGGATATGTTTAAAACTAAATAAGACACCAAGATTTGGTAACTGAACAAGTCAAACTATTTATTATTATCATTCAAAATGTTGACATTAATGCCTTCTTTTTGAGTTGGAGATTCAAATTCTATCTCCTTTATTTTAAAAATCTACTGTGCAAGAAAGTTAAAAGTGCTTTGTTTAAATTAAATTCAGCTGGATTTTCTTTATTCTACTCTGAACTTTTACAAGGACTAGTTGCTAAAAGTACATAAAAGTATCTTATTCTACAAACTTCGGGTGGTTTTGAATTCTCACACCTTTAATTTTATTTATTGTTTTGGTAGGAGAAAAAGTCAAAGATATGTTGAAATAACAAATAACATGTGGGTTTAATGTCATATCAAGTCATGTAGGAGAAAAGGTTGTTAAAATATAATGAGATTTTAAGTACAGTTAGTTGATGATGGAAGTGGAACCGTCCTTGTTATTTTCTAATGGAAAAATATGATTGCTACAATTATTGACACCGCCAAAGTAGATTAGACCTTGCTTCTTTAGTTGCTGATATTAACTCTGGTCAAAGTTTGGTGTCTTGGATATTTGAAAGGCATTTTCCATTACCAAACATGGAGAGACATTAAAGGTTGAAGTGCCCTTTACCAACTTCGTTTGCTATTTATCATGTTCCGTAGGAGTAAGCCTTGGTGAAGGAACCGGTGCAACAATGTCGGACGACGAAGACGACATTCCGATGGACTTTTCGCTCGATCAATCTGGAGCCGACGCACACGACATGATGGGATTCGGACCACTGCTACCAACTGAATCCGAAAGGTCGCTGATGGAGAGGGTCCGCCAAGAACTGAAGATTGAGCTGAAACAGGTTCCCTTTTCATGATTAAAAAAGAACTTTCCCATTACATACATTGCAGATTAAAAGGGAAAGACAAAGAACTAATTTATATGAACAAATTTGTGGTGTTGGAGATGAACCTGATTTGGAGTCTAAAATGTGGTGGTGTGTTGCAGGGTTTCAAGTCAAGAATTGAAGATGTGAGAGAGGAAATATTGAGAAAGAGAAGGGCAGGGAAGTTACCTGGGGATACAACAACAGTTTTGAAAAACTGGTGGCAGCAACATTCTAAATGGCCATACCCAACTGTAAGTAAAGAAAAAATAAACAAACAAAACTCCCATCTTCGAAAATGGAAAACCTCTATAATATTTCGTGTTTGTTTATCCAGGAAGACGATAAGGCTAAGCTAGTGGAGGAGACAGGTTTGCAGCTGAAACAAATAAACAATTGGTTCATCAACCAAAGGAAGAGAAACTGGCACAGCAACTCTCAGTCAGTGACATCTTTGAAGTCCAAGCGCAAGAGATAAAAAGAAGAGACAGAAAATTTTTCATCCAATTATAATATGAAATATGTTGTAGCTTTTGGTAAAAGGTTATGCTGACAGAGAGAGTAACAAAAACATGAGATTAAGCTTACTGTAAAATGAGGTTAGAGAATTAAGGATATTGTGACAGAGATTTGATTAACATGTCTTTTCTTTAAGGTTGTAAATTGTTGGCTTTCTTTAATACATCAAATTCTACATTTCTTGCCTTTCATTCTTTTTTTTTCTTTTCGTAATTTTGGATTTTCTCCTTAATAATTTTATCAGATGATGAGCTATTGTTCTTATGT

Coding sequence (CDS)

ATGATTAAAAAAGAACTTTCCCATTACATACATTGCAGATTAAAAGGGAAAGACAAAGAACTAATTTATATGAACAAATTTGTGGTGTTGGAGATGAACCTGATTTGGAGTCTAAAATGTGGTGGTGTGTTGCAGGGTTTCAAGTCAAGAATTGAAGATGTGAGAGAGGAAATATTGAGAAAGAGAAGGGCAGGGAAGTTACCTGGGGATACAACAACAGTTTTGAAAAACTGGTGGCAGCAACATTCTAAATGGCCATACCCAACTGAAGACGATAAGGCTAAGCTAGTGGAGGAGACAGGTTTGCAGCTGAAACAAATAAACAATTGGTTCATCAACCAAAGGAAGAGAAACTGGCACAGCAACTCTCAGTCAGTGACATCTTTGAAGTCCAAGCGCAAGAGATAA

Protein sequence

MIKKELSHYIHCRLKGKDKELIYMNKFVVLEMNLIWSLKCGGVLQGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKRKR
Homology
[Close]
BLAST of Cucsat.G21124.T3 vs. ExPASy Swiss-Prot
Match: P46606 (Homeobox protein HD1 OS=Brassica napus OX=3708 GN=HD1 PE=2 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 3.9e-45
Identity = 85/90 (94.44%), Postives = 88/90 (97.78%), Query Frame = 0 

Query: 45  QGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQL 104
           QGFKSRIEDVREEI+RKRRAGKLPGDTTTVLKNWWQQH KWPYPTEDDKAKLVEETGLQL
Sbjct: 204 QGFKSRIEDVREEIMRKRRAGKLPGDTTTVLKNWWQQHCKWPYPTEDDKAKLVEETGLQL 263

Query: 105 KQINNWFINQRKRNWHSNSQSVTSLKSKRK 135
           KQINNWFINQRKRNWH+NS S+TSLKSKRK
Sbjct: 264 KQINNWFINQRKRNWHNNSHSLTSLKSKRK 293

[Close]
BLAST of Cucsat.G21124.T3 vs. ExPASy Swiss-Prot
Match: Q9FPQ8 (Homeobox protein knotted-1-like 7 OS=Arabidopsis thaliana OX=3702 GN=KNAT7 PE=1 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 3.9e-45
Identity = 85/90 (94.44%), Postives = 88/90 (97.78%), Query Frame = 0 

Query: 45  QGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQL 104
           QGFKSRIEDVREEI+RKRRAGKLPGDTTTVLKNWWQQH KWPYPTEDDKAKLVEETGLQL
Sbjct: 201 QGFKSRIEDVREEIMRKRRAGKLPGDTTTVLKNWWQQHCKWPYPTEDDKAKLVEETGLQL 260

Query: 105 KQINNWFINQRKRNWHSNSQSVTSLKSKRK 135
           KQINNWFINQRKRNWH+NS S+TSLKSKRK
Sbjct: 261 KQINNWFINQRKRNWHNNSHSLTSLKSKRK 290

[Close]
BLAST of Cucsat.G21124.T3 vs. ExPASy Swiss-Prot
Match: Q94LW3 (Homeobox protein knotted-1-like 3 OS=Oryza sativa subsp. japonica OX=39947 GN=HOS66 PE=2 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 1.3e-43
Identity = 85/91 (93.41%), Postives = 88/91 (96.70%), Query Frame = 0 

Query: 45  QGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQL 104
           QGFKSRIEDVREEILRKRRAGKLPGDTTT+LK WWQQHSKWPYPTEDDKAKLVEETGLQL
Sbjct: 225 QGFKSRIEDVREEILRKRRAGKLPGDTTTILKQWWQQHSKWPYPTEDDKAKLVEETGLQL 284

Query: 105 KQINNWFINQRKRNWHSNSQSVTSLKSKRKR 136
           KQINNWFINQRKRNWH+NSQ+ T LKSKRKR
Sbjct: 285 KQINNWFINQRKRNWHNNSQTST-LKSKRKR 314

[Close]
BLAST of Cucsat.G21124.T3 vs. ExPASy Swiss-Prot
Match: P56659 (Homeobox protein knotted-1-like 1 (Fragment) OS=Zea mays OX=4577 GN=KNOX1 PE=2 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 1.5e-39
Identity = 73/78 (93.59%), Postives = 77/78 (98.72%), Query Frame = 0 

Query: 45  QGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQL 104
           QGFKSRIEDVREEILRKRRAGKLPGDTT++LK WWQ+HSKWPYPTEDDKAKLVEETGLQL
Sbjct: 11  QGFKSRIEDVREEILRKRRAGKLPGDTTSILKQWWQEHSKWPYPTEDDKAKLVEETGLQL 70

Query: 105 KQINNWFINQRKRNWHSN 123
           KQINNWFINQRKRNWH+N
Sbjct: 71  KQINNWFINQRKRNWHNN 88

[Close]
BLAST of Cucsat.G21124.T3 vs. ExPASy Swiss-Prot
Match: O04136 (Homeobox protein knotted-1-like 3 OS=Malus domestica OX=3750 PE=2 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 1.9e-39
Identity = 75/91 (82.42%), Postives = 83/91 (91.21%), Query Frame = 0 

Query: 45  QGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQL 104
           QG+K +I D+REEILRKRRAGKLPGDTT+VLK WWQ HSKWPYPTE+DKA+LV+ETGLQL
Sbjct: 337 QGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQL 396

Query: 105 KQINNWFINQRKRNWHSNSQSVTSLKSKRKR 136
           KQINNWFINQRKRNWHSN  + T LKSKRKR
Sbjct: 397 KQINNWFINQRKRNWHSNPSTSTVLKSKRKR 427

[Close]
BLAST of Cucsat.G21124.T3 vs. NCBI nr
Match: KAG5593086.1 (hypothetical protein H5410_043600 [Solanum commersonii])

HSP 1 Score: 192 bits (487), Expect = 1.15e-60
Identity = 91/92 (98.91%), Postives = 92/92 (100.00%), Query Frame = 0 

Query: 44  LQGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQ 103
           LQGF+SRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQ
Sbjct: 15  LQGFRSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQ 74

Query: 104 LKQINNWFINQRKRNWHSNSQSVTSLKSKRKR 135
           LKQINNWFINQRKRNWHSNSQSVTSLKSKRKR
Sbjct: 75  LKQINNWFINQRKRNWHSNSQSVTSLKSKRKR 106

[Close]
BLAST of Cucsat.G21124.T3 vs. NCBI nr
Match: MBA0680589.1 (hypothetical protein [Gossypium aridum] >MBA0709801.1 hypothetical protein [Gossypium laxum] >MBA0845878.1 hypothetical protein [Gossypium armourianum])

HSP 1 Score: 191 bits (486), Expect = 5.38e-60
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0 

Query: 45  QGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQL 104
           QGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQL
Sbjct: 53  QGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQL 112

Query: 105 KQINNWFINQRKRNWHSNSQSVTSLKSKRKR 135
           KQINNWFINQRKRNWHSNSQSVTSLKSKRKR
Sbjct: 113 KQINNWFINQRKRNWHSNSQSVTSLKSKRKR 143

[Close]
BLAST of Cucsat.G21124.T3 vs. NCBI nr
Match: TQE10128.1 (hypothetical protein C1H46_004298 [Malus baccata])

HSP 1 Score: 191 bits (486), Expect = 5.38e-60
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0 

Query: 45  QGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQL 104
           QGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQL
Sbjct: 53  QGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQL 112

Query: 105 KQINNWFINQRKRNWHSNSQSVTSLKSKRKR 135
           KQINNWFINQRKRNWHSNSQSVTSLKSKRKR
Sbjct: 113 KQINNWFINQRKRNWHSNSQSVTSLKSKRKR 143

[Close]
BLAST of Cucsat.G21124.T3 vs. NCBI nr
Match: KAA3456467.1 (homeobox protein HD1-like [Gossypium australe])

HSP 1 Score: 191 bits (486), Expect = 9.32e-60
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0 

Query: 45  QGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQL 104
           QGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQL
Sbjct: 70  QGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQL 129

Query: 105 KQINNWFINQRKRNWHSNSQSVTSLKSKRKR 135
           KQINNWFINQRKRNWHSNSQSVTSLKSKRKR
Sbjct: 130 KQINNWFINQRKRNWHSNSQSVTSLKSKRKR 160

[Close]
BLAST of Cucsat.G21124.T3 vs. NCBI nr
Match: AGT52128.1 (putative lignin regulation, partial [Salix herbacea])

HSP 1 Score: 190 bits (482), Expect = 1.22e-59
Identity = 90/91 (98.90%), Postives = 91/91 (100.00%), Query Frame = 0 

Query: 45  QGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQL 104
           QGFKSRIEDVREEILRKRRAGKLPGDTT+VLKNWWQQHSKWPYPTEDDKAKLVEETGLQL
Sbjct: 35  QGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLVEETGLQL 94

Query: 105 KQINNWFINQRKRNWHSNSQSVTSLKSKRKR 135
           KQINNWFINQRKRNWHSNSQSVTSLKSKRKR
Sbjct: 95  KQINNWFINQRKRNWHSNSQSVTSLKSKRKR 125

[Close]
BLAST of Cucsat.G21124.T3 vs. ExPASy TrEMBL
Match: A0A7J9KHF5 (Uncharacterized protein OS=Gossypium armourianum OX=34283 GN=Goarm_022387 PE=3 SV=1)

HSP 1 Score: 191 bits (486), Expect = 2.60e-60
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0 

Query: 45  QGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQL 104
           QGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQL
Sbjct: 53  QGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQL 112

Query: 105 KQINNWFINQRKRNWHSNSQSVTSLKSKRKR 135
           KQINNWFINQRKRNWHSNSQSVTSLKSKRKR
Sbjct: 113 KQINNWFINQRKRNWHSNSQSVTSLKSKRKR 143

[Close]
BLAST of Cucsat.G21124.T3 vs. ExPASy TrEMBL
Match: A0A7J8X1B9 (Uncharacterized protein OS=Gossypium aridum OX=34290 GN=Goari_012280 PE=3 SV=1)

HSP 1 Score: 191 bits (486), Expect = 2.60e-60
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0 

Query: 45  QGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQL 104
           QGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQL
Sbjct: 53  QGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQL 112

Query: 105 KQINNWFINQRKRNWHSNSQSVTSLKSKRKR 135
           KQINNWFINQRKRNWHSNSQSVTSLKSKRKR
Sbjct: 113 KQINNWFINQRKRNWHSNSQSVTSLKSKRKR 143

[Close]
BLAST of Cucsat.G21124.T3 vs. ExPASy TrEMBL
Match: A0A7J8ZDF6 (Uncharacterized protein OS=Gossypium laxum OX=34288 GN=Golax_024822 PE=3 SV=1)

HSP 1 Score: 191 bits (486), Expect = 2.60e-60
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0 

Query: 45  QGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQL 104
           QGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQL
Sbjct: 53  QGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQL 112

Query: 105 KQINNWFINQRKRNWHSNSQSVTSLKSKRKR 135
           KQINNWFINQRKRNWHSNSQSVTSLKSKRKR
Sbjct: 113 KQINNWFINQRKRNWHSNSQSVTSLKSKRKR 143

[Close]
BLAST of Cucsat.G21124.T3 vs. ExPASy TrEMBL
Match: A0A540NGG2 (Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_004298 PE=3 SV=1)

HSP 1 Score: 191 bits (486), Expect = 2.60e-60
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0 

Query: 45  QGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQL 104
           QGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQL
Sbjct: 53  QGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQL 112

Query: 105 KQINNWFINQRKRNWHSNSQSVTSLKSKRKR 135
           KQINNWFINQRKRNWHSNSQSVTSLKSKRKR
Sbjct: 113 KQINNWFINQRKRNWHSNSQSVTSLKSKRKR 143

[Close]
BLAST of Cucsat.G21124.T3 vs. ExPASy TrEMBL
Match: A0A5B6UHZ4 (Homeobox protein HD1-like OS=Gossypium australe OX=47621 GN=EPI10_003268 PE=3 SV=1)

HSP 1 Score: 191 bits (486), Expect = 4.51e-60
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0 

Query: 45  QGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQL 104
           QGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQL
Sbjct: 70  QGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQL 129

Query: 105 KQINNWFINQRKRNWHSNSQSVTSLKSKRKR 135
           KQINNWFINQRKRNWHSNSQSVTSLKSKRKR
Sbjct: 130 KQINNWFINQRKRNWHSNSQSVTSLKSKRKR 160

The following BLAST results are available for this feature:
BLAST of Cucsat.G21124.T3 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P466063.9e-4594.44Homeobox protein HD1 OS=Brassica napus OX=3708 GN=HD1 PE=2 SV=1[more]
Q9FPQ83.9e-4594.44Homeobox protein knotted-1-like 7 OS=Arabidopsis thaliana OX=3702 GN=KNAT7 PE=1 ... [more]
Q94LW31.3e-4393.41Homeobox protein knotted-1-like 3 OS=Oryza sativa subsp. japonica OX=39947 GN=HO... [more]
P566591.5e-3993.59Homeobox protein knotted-1-like 1 (Fragment) OS=Zea mays OX=4577 GN=KNOX1 PE=2 S... [more]
O041361.9e-3982.42Homeobox protein knotted-1-like 3 OS=Malus domestica OX=3750 PE=2 SV=1[more]
BLAST of Cucsat.G21124.T3 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG5593086.11.15e-6098.91hypothetical protein H5410_043600 [Solanum commersonii][more]
MBA0680589.15.38e-60100.00hypothetical protein [Gossypium aridum] >MBA0709801.1 hypothetical protein [Goss... [more]
TQE10128.15.38e-60100.00hypothetical protein C1H46_004298 [Malus baccata][more]
KAA3456467.19.32e-60100.00homeobox protein HD1-like [Gossypium australe][more]
AGT52128.11.22e-5998.90putative lignin regulation, partial [Salix herbacea][more]
BLAST of Cucsat.G21124.T3 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A7J9KHF52.60e-60100.00Uncharacterized protein OS=Gossypium armourianum OX=34283 GN=Goarm_022387 PE=3 S... [more]
A0A7J8X1B92.60e-60100.00Uncharacterized protein OS=Gossypium aridum OX=34290 GN=Goari_012280 PE=3 SV=1[more]
A0A7J8ZDF62.60e-60100.00Uncharacterized protein OS=Gossypium laxum OX=34288 GN=Golax_024822 PE=3 SV=1[more]
A0A540NGG22.60e-60100.00Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_004298 PE=3 SV=1[more]
A0A5B6UHZ44.51e-60100.00Homeobox protein HD1-like OS=Gossypium australe OX=47621 GN=EPI10_003268 PE=3 SV... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001356Homeobox domainSMARTSM00389HOX_1coord: 60..125
e-value: 1.4E-10
score: 51.2
IPR001356Homeobox domainPROSITEPS50071HOMEOBOX_2coord: 58..121
score: 11.677235
IPR001356Homeobox domainCDDcd00086homeodomaincoord: 61..122
e-value: 3.90629E-10
score: 50.3197
NoneNo IPR availableGENE3D1.10.10.60coord: 57..131
e-value: 3.8E-26
score: 92.5
NoneNo IPR availablePANTHERPTHR11850HOMEOBOX PROTEIN TRANSCRIPTION FACTORScoord: 44..135
NoneNo IPR availablePANTHERPTHR11850:SF315HOMEOBOX PROTEIN KNOTTED-1-LIKE 7coord: 44..135
IPR008422Homeobox KN domainPFAMPF05920Homeobox_KNcoord: 78..117
e-value: 4.0E-18
score: 65.0
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 60..125

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cucsat.G21124Cucsat.G21124gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G21124.T3.E1Cucsat.G21124.T3.E1exon
Cucsat.G21124.T3.E2Cucsat.G21124.T3.E2exon
Cucsat.G21124.T3.E3Cucsat.G21124.T3.E3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G21124.T3.C2Cucsat.G21124.T3.C2CDS
Cucsat.G21124.T3.C1Cucsat.G21124.T3.C1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cucsat.G21124.T3Cucsat.G21124.T3-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0010192 mucilage biosynthetic process
biological_process GO:0080001 mucilage extrusion from seed coat
biological_process GO:0045892 negative regulation of transcription, DNA-templated
biological_process GO:2000652 regulation of secondary cell wall biogenesis
biological_process GO:0006357 regulation of transcription by RNA polymerase II
biological_process GO:0010214 seed coat development
biological_process GO:0080112 seed growth
biological_process GO:0010089 xylem development
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function GO:0000976 transcription cis-regulatory region binding