Cucsat.G21124 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G21124
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	homeobox protein knotted-1-like 7
Location	ctg910: 2115878 .. 2120161 (-)
RNA-Seq Expression	Cucsat.G21124
Synteny	Cucsat.G21124

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAAAAGAAAGAAAAAAAGGAATTGAAAAGTGTCAGGGATTGGGCATAGAAGAGCAGCTTTATCTCCCTTTCCTAGTAATGATTCCGTAGCTCTCTTTTATCAATGCTCCTTTACCTCTTACCCTTAATACAAAACAAATTCTCTCTCTCTCTCTCTTTCTTTCTTTATTTCTTCCTTCTTCTTCTTCCCTTCCTTCCTTTTCTCTGTTTGTAAAATTTTCTGAAATTCTCAGACCTGGTGCAGAAAGTTTTGTGTCTCGGATCCCTATATACTCTTCTCTCTCTTTCTTCTTCATTTCACACCATTAACGAGAAAACTGACTCTTCTCTATCAACATATTCATTCAAAACTAAATCCCAACAAACCCTTTTTTTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAATCACCAATTTCACTATTTGGGCTCACTCATTTCTTCTTTTTTCCTTCTTTACTTTCTAATTTACCTTTTTCTACACAACCCCTTTTTGCTTTTTTCTGCTAATTTTAACTTGGGTTTTTCGAGGGGTTCATTTGAAATGCAAGAACCTGGGTTGGGAATGATGACTGCTGCAGGTGGGTCTAGTGGTGGCTTAAGCGGCGACGTTTCGGTTTCCGGCGAGGGAGTTCATAACAGTCAACTGAAAGCGGAGATTGCTACTCATCCACTTTATGAGCAGCTTCTTTCAGCTCATGTTGCTTGTCTTCGTGTTGCTACTCCGATTGATCAGCTTCCGATGATCGATGCCCAGCTTTCTCAATCCCACCATATTTTGCGCTCTTATGCTTCTTCTCAAACAGCATCACCAAAATGCTCATTCCTTAACGCCTCACGAGCGACAAGAGCTTGACAATTTTCTGGTGATTTTTCTTTCTTTATTTATTTTAAAGAAAAGATTTAGTCGTATTTTGGAAAGTGGGTTGAACTTTGTTTTTTAATTTATGATGGGGTTTCTTTTCTTTTCTTTTCTTTTTTCAGGCACAGTATATGATCGTTTTGTGTTCTTTCAAAGAGCAGCTTCAACAACATGTGAGAGTCCACGCAGTTGAAGCTGTTATGGCTTGCCGTGAAATTGAAAACACTCTACAAGCTCTTACAGGTATGTACATCTAACTATCTCATCTCAATTCTTAACAAAAATCCCTTTAAAACAAGAAAAACAAAGATAAACCCATGATTTATCATCAGTTTTGAATGTGCATAAAAGTCTCGAAAATGTTACAGCATGAATATGTGCATGGTTTCTTTGTGTTATGAGTGTATAGAGATGTTAAAACAAAGGGGGGTTTTGTTTTGGTTTGAATTCGGGTCCAAATGAGGGTAAAAAAACAAACACCGGAGGATTTTTTGAAAGGGGTTTTTTTGTTTTGGGGGGTTTGAGGGATGAGGATTATGGTGAAAAGCAGCCATGGAAGTGGGTGCAAAAGAGGTCCCTACTTGTGAATACCAAGATTGTAGTTGGGAAAAGGATTGGTCTGTTGGGTTCGGTGAGGGTACCACCAATAGGGGACACCAACAGATAAGGTTGCTTGCCCCTGGCAATACTTGCGTTCCACTGTAAACAATAATAATATTCTCCCTATTATTATATTTCTTCATCTTTTTGCTTTGTAAAGATAGTACATGAACCTAGCTAGCTACTTCTTTTTCCTCTCTCTTTTTTCTTTCTATATATAAAAATAGACTAAAAGAGCTACACTTATCATATATGATTACATTAATCACCAACTGATCATTTTTAATCATTCAAGTGACCTAATATTTTTTTAGGATATGGATATACCCAACGACAAAGCTGTTATGTTTTTGTAAACTTAACTTGCAAATTTGGCTATGAGTTAGAAAGATTTAGAACTTATTGTATGTGGTTTATAAATAGAATTTAGTTCATTCTCACAGTTTGATAAAGTCCTCATGTTTAGTTTAACCGTGCTTTATTGTTCTAGTGAGATATTCTTATACACCACCTGATCCTACGGTGCTTTAGTATTTTATTAAAAGAAATCACTAATCCTAAGTTGGGACTATTAATGAGGTTTTATTTTTTTAATTTTATCACAACATAGAGACTAAATAAGATATTTTATTTTAGTTTTTTTTTTTAAATAAAAAAAGAGAAAAAAAAAACCTCTTTCATTGGTGAGTGAGTGACCTTTCTAGTTATATGATTTAACAAAACAATCTGGCGAATGAAAGGGTTACCACTCAAGCAGTTGATTGGATGGGTTAAAGAAACTAGGCATTTTATCATAAAGTAATCTGTTGCTTATTGATTGGGTTTGCCAGTTTTAGACCTGCCCTCCTATAACTACAACTACAATGGTCCCTATTCTCAATCTCCATACCTCCATGAAGTTCATGATCAGTTATTCTGTCTGTTTTAAATCATCTCTATTTTGAACCCTAGCATTGAGAATGCATAGAAACTATTCATTACTGCGTCTGCCAATGGATGCTGCTGAGGACCTAAGGGCTGTGGTGTAGGGTCTTAAATACCAATGCAAGCTTTTATATTAAGGACCCTAGGCCGCCTAAAGGGCATTGGAGGCTCATCCTGACAGTATTTAACTAAATGCTGCACTTTATGCGGCTTTTTTGGTCTGTTAAATTTGGATATGTTTAAAACTAAATAAGACACCAAGATTTGGTAACTGAACAAGTCAAACTATTTATTATTATCATTCAAAATGTTGACATTAATGCCTTCTTTTTGAGTTGGAGATTCAAATTCTATCTCCTTTATTTTAAAAATCTACTGTGCAAGAAAGTTAAAAGTGCTTTGTTTAAATTAAATTCAGCTGGATTTTCTTTATTCTACTCTGAACTTTTACAAGGACTAGTTGCTAAAAGTACATAAAAGTATCTTATTCTACAAACTTCGGGTGGTTTTGAATTCTCACACCTTTAATTTTATTTATTGTTTTGGTAGGAGAAAAAGTCAAAGATATGTTGAAATAACAAATAACATGTGGGTTTAATGTCATATCAAGTCATGTAGGAGAAAAGGTTGTTAAAATATAATGAGATTTTAAGTACAGTTAGTTGATGATGGAAGTGGAACCGTCCTTGTTATTTTCTAATGGAAAAATATGATTGCTACAATTATTGACACCGCCAAAGTAGATTAGACCTTGCTTCTTTAGTTGCTGATATTAACTCTGGTCAAAGTTTGGTGTCTTGGATATTTGAAAGGCATTTTCCATTACCAAACATGGAGAGACATTAAAGGTTGAAGTGCCCTTTACCAACTTCGTTTGCTATTTATCATGTTCCGTAGGAGTAAGCCTTGGTGAAGGAACCGGTGCAACAATGTCGGACGACGAAGACGACATTCCGATGGACTTTTCGCTCGATCAATCTGGAGCCGACGCACACGACATGATGGGATTCGGACCACTGCTACCAACTGAATCCGAAAGGTCGCTGATGGAGAGGGTCCGCCAAGAACTGAAGATTGAGCTGAAACAGGTTCCCTTTTCATGATTAAAAAAGAACTTTCCCATTACATACATTGCAGATTAAAAGGGAAAGACAAAGAACTAATTTATATGAACAAATTTGTGGTGTTGGAGATGAACCTGATTTGGAGTCTAAAATGTGGTGGTGTGTTGCAGGGTTTCAAGTCAAGAATTGAAGATGTGAGAGAGGAAATATTGAGAAAGAGAAGGGCAGGGAAGTTACCTGGGGATACAACAACAGTTTTGAAAAACTGGTGGCAGCAACATTCTAAATGGCCATACCCAACTGTAAGTAAAGAAAAAATAAACAAACAAAACTCCCATCTTCGAAAATGGAAAACCTCTATAATATTTCGTGTTTGTTTATCCAGGAAGACGATAAGGCTAAGCTAGTGGAGGAGACAGGTTTGCAGCTGAAACAAATAAACAATTGGTTCATCAACCAAAGGAAGAGAAACTGGCACAGCAACTCTCAGTCAGTGACATCTTTGAAGTCCAAGCGCAAGAGATAAAAAGAAGAGACAGAAAATTTTTCATCCAATTATAATATGAAATATGTTGTAGCTTTTGGTAAAAGGTTATGCTGACAGAGAGAGTAACAAAAACATGAGATTAAGCTTACTGTAAAATGAGGTTAGAGAATTAAGGATATTGTGACAGAGATTTGATTAACATGTCTTTTCTTTAAGGTTGTAAATTGTTGGCTTTCTTTAATACATCAAATTCTACATTTCTTGCCTTTCATTCTTTTTTTTTCTTTTCGTAATTTTGGATTTTCTCCTTAATAATTTTATCAGATGATGAGCTATTGTTCTTATGT

Coding sequence (CDS)

ATGTCGGACGACGAAGACGACATTCCGATGGACTTTTCGCTCGATCAATCTGGAGCCGACGCACACGACATGATGGGATTCGGACCACTGCTACCAACTGAATCCGAAAGGTCGCTGATGGAGAGGGTCCGCCAAGAACTGAAGATTGAGCTGAAACAGGGTTTCAAGTCAAGAATTGAAGATGTGAGAGAGGAAATATTGAGAAAGAGAAGGGCAGGGAAGTTACCTGGGGATACAACAACAGTTTTGAAAAACTGGTGGCAGCAACATTCTAAATGGCCATACCCAACTGAAGACGATAAGGCTAAGCTAGTGGAGGAGACAGGTTTGCAGCTGAAACAAATAAACAATTGGTTCATCAACCAAAGGAAGAGAAACTGGCACAGCAACTCTCAGTCAGTGACATCTTTGAAGTCCAAGCGCAAGAGATAA

Protein sequence

MSDDEDDIPMDFSLDQSGADAHDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKRKR

Homology

[Close]

BLAST of Cucsat.G21124 vs. ExPASy Swiss-Prot
Match: Q9FPQ8 (Homeobox protein knotted-1-like 7 OS=Arabidopsis thaliana OX=3702 GN=KNAT7 PE=1 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 2.7e-68
Identity = 129/145 (88.97%), Postives = 135/145 (93.10%), Query Frame = 0


Query: 1   MSDDEDDIPMDFSLDQSGAD---AHDMMGFGPLLPTESERSLMERVRQELKIELKQGFKS 60
           MS+DEDD+PMDFS D SG D    HDM GFGPLLPTESERSLMERVRQELK+ELKQGFKS
Sbjct: 146 MSEDEDDLPMDFSSDNSGVDFSGGHDMTGFGPLLPTESERSLMERVRQELKLELKQGFKS 205

Query: 61  RIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINN 120
           RIEDVREEI+RKRRAGKLPGDTTTVLKNWWQQH KWPYPTEDDKAKLVEETGLQLKQINN
Sbjct: 206 RIEDVREEIMRKRRAGKLPGDTTTVLKNWWQQHCKWPYPTEDDKAKLVEETGLQLKQINN 265

Query: 121 WFINQRKRNWHSNSQSVTSLKSKRK 143
           WFINQRKRNWH+NS S+TSLKSKRK
Sbjct: 266 WFINQRKRNWHNNSHSLTSLKSKRK 290

[Close]

BLAST of Cucsat.G21124 vs. ExPASy Swiss-Prot
Match: P46606 (Homeobox protein HD1 OS=Brassica napus OX=3708 GN=HD1 PE=2 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 2.3e-67
Identity = 128/145 (88.28%), Postives = 134/145 (92.41%), Query Frame = 0


Query: 1   MSDDEDDIPMDFSLDQSGAD---AHDMMGFGPLLPTESERSLMERVRQELKIELKQGFKS 60
           MS+DEDD+ MDFS D SG D    HDM GFGPLLPTESERSLMERVRQELK+ELKQGFKS
Sbjct: 149 MSEDEDDLQMDFSSDNSGVDFSGGHDMTGFGPLLPTESERSLMERVRQELKLELKQGFKS 208

Query: 61  RIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINN 120
           RIEDVREEI+RKRRAGKLPGDTTTVLKNWWQQH KWPYPTEDDKAKLVEETGLQLKQINN
Sbjct: 209 RIEDVREEIMRKRRAGKLPGDTTTVLKNWWQQHCKWPYPTEDDKAKLVEETGLQLKQINN 268

Query: 121 WFINQRKRNWHSNSQSVTSLKSKRK 143
           WFINQRKRNWH+NS S+TSLKSKRK
Sbjct: 269 WFINQRKRNWHNNSHSLTSLKSKRK 293

[Close]

BLAST of Cucsat.G21124 vs. ExPASy Swiss-Prot
Match: Q94LW3 (Homeobox protein knotted-1-like 3 OS=Oryza sativa subsp. japonica OX=39947 GN=HOS66 PE=2 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 6.4e-62
Identity = 122/144 (84.72%), Postives = 131/144 (90.97%), Query Frame = 0


Query: 1   MSDDEDD-IPMDFSLDQSGADAHDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRI 60
           MS+DED+  PM       G+D HD+MGFGPL+PT+SERSLMERVRQELKIELKQGFKSRI
Sbjct: 172 MSEDEDETAPMLEGPMDMGSDGHDLMGFGPLMPTDSERSLMERVRQELKIELKQGFKSRI 231

Query: 61  EDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWF 120
           EDVREEILRKRRAGKLPGDTTT+LK WWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWF
Sbjct: 232 EDVREEILRKRRAGKLPGDTTTILKQWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWF 291

Query: 121 INQRKRNWHSNSQSVTSLKSKRKR 144
           INQRKRNWH+NSQ+ T LKSKRKR
Sbjct: 292 INQRKRNWHNNSQTST-LKSKRKR 314

[Close]

BLAST of Cucsat.G21124 vs. ExPASy Swiss-Prot
Match: O04136 (Homeobox protein knotted-1-like 3 OS=Malus domestica OX=3750 PE=2 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 1.9e-58
Identity = 113/144 (78.47%), Postives = 125/144 (86.81%), Query Frame = 0


Query: 1   MSDDEDD-IPMDFSLDQSGADAHDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRI 60
           MSDDEDD +  D +L   G + HD MGFGPL+PTESERSLMERVRQELK ELKQG+K +I
Sbjct: 284 MSDDEDDQVDSDANLFDEGMEGHDSMGFGPLIPTESERSLMERVRQELKHELKQGYKEKI 343

Query: 61  EDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWF 120
            D+REEILRKRRAGKLPGDTT+VLK WWQ HSKWPYPTE+DKA+LV+ETGLQLKQINNWF
Sbjct: 344 VDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWF 403

Query: 121 INQRKRNWHSNSQSVTSLKSKRKR 144
           INQRKRNWHSN  + T LKSKRKR
Sbjct: 404 INQRKRNWHSNPSTSTVLKSKRKR 427

[Close]

BLAST of Cucsat.G21124 vs. ExPASy Swiss-Prot
Match: P48000 (Homeobox protein knotted-1-like 3 OS=Arabidopsis thaliana OX=3702 GN=KNAT3 PE=1 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 1.7e-54
Identity = 108/143 (75.52%), Postives = 123/143 (86.01%), Query Frame = 0


Query: 1   MSDDEDD-IPMDFSLDQSGADAHDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRI 60
           MSDDED+ +  D ++   G    D++GFGPL+PTESERSLMERVRQELK ELKQG+K +I
Sbjct: 279 MSDDEDEQVESDANMFDGGL---DVLGFGPLIPTESERSLMERVRQELKHELKQGYKEKI 338

Query: 61  EDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWF 120
            D+REEILRKRRAGKLPGDTT+VLK WWQ HSKWPYPTE+DKA+LV+ETGLQLKQINNWF
Sbjct: 339 VDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWF 398

Query: 121 INQRKRNWHSNSQSVTSLKSKRK 143
           INQRKRNWHSN  S T LK+KRK
Sbjct: 399 INQRKRNWHSNPSSSTVLKNKRK 418

[Close]

BLAST of Cucsat.G21124 vs. NCBI nr
Match: KAA0042807.1 (homeobox protein knotted-1-like 7 [Cucumis melo var. makuwa])

HSP 1 Score: 286 bits (731), Expect = 1.74e-96
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0


Query: 1   MSDDEDDIPMDFSLDQSGADAHDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIE 60
           MSDDEDDIPMDFSLDQSGADAHDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIE
Sbjct: 49  MSDDEDDIPMDFSLDQSGADAHDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIE 108

Query: 61  DVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFI 120
           DVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFI
Sbjct: 109 DVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFI 168

Query: 121 NQRKRNWHSNSQSVTSLKSKRKR 143
           NQRKRNWHSNSQSVTSLKSKRKR
Sbjct: 169 NQRKRNWHSNSQSVTSLKSKRKR 191

[Close]

BLAST of Cucsat.G21124 vs. NCBI nr
Match: XP_022159793.1 (homeobox protein knotted-1-like 7 [Momordica charantia])

HSP 1 Score: 286 bits (731), Expect = 7.31e-96
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0


Query: 1   MSDDEDDIPMDFSLDQSGADAHDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIE 60
           MSDDEDDIPMDFSLDQSGADAHDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIE
Sbjct: 91  MSDDEDDIPMDFSLDQSGADAHDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIE 150

Query: 61  DVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFI 120
           DVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFI
Sbjct: 151 DVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFI 210

Query: 121 NQRKRNWHSNSQSVTSLKSKRKR 143
           NQRKRNWHSNSQSVTSLKSKRKR
Sbjct: 211 NQRKRNWHSNSQSVTSLKSKRKR 233

[Close]

BLAST of Cucsat.G21124 vs. NCBI nr
Match: XP_008437194.1 (PREDICTED: homeobox protein knotted-1-like 7 [Cucumis melo])

HSP 1 Score: 286 bits (731), Expect = 6.83e-95
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0


Query: 1   MSDDEDDIPMDFSLDQSGADAHDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIE 60
           MSDDEDDIPMDFSLDQSGADAHDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIE
Sbjct: 158 MSDDEDDIPMDFSLDQSGADAHDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIE 217

Query: 61  DVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFI 120
           DVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFI
Sbjct: 218 DVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFI 277

Query: 121 NQRKRNWHSNSQSVTSLKSKRKR 143
           NQRKRNWHSNSQSVTSLKSKRKR
Sbjct: 278 NQRKRNWHSNSQSVTSLKSKRKR 300

[Close]

BLAST of Cucsat.G21124 vs. NCBI nr
Match: XP_004143939.1 (homeobox protein knotted-1-like 7 [Cucumis sativus] >KGN50155.1 hypothetical protein Csa_000116 [Cucumis sativus])

HSP 1 Score: 286 bits (731), Expect = 7.05e-95
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0


Query: 1   MSDDEDDIPMDFSLDQSGADAHDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIE 60
           MSDDEDDIPMDFSLDQSGADAHDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIE
Sbjct: 159 MSDDEDDIPMDFSLDQSGADAHDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIE 218

Query: 61  DVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFI 120
           DVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFI
Sbjct: 219 DVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFI 278

Query: 121 NQRKRNWHSNSQSVTSLKSKRKR 143
           NQRKRNWHSNSQSVTSLKSKRKR
Sbjct: 279 NQRKRNWHSNSQSVTSLKSKRKR 301

[Close]

BLAST of Cucsat.G21124 vs. NCBI nr
Match: XP_038875957.1 (homeobox protein knotted-1-like 7 [Benincasa hispida])

HSP 1 Score: 284 bits (727), Expect = 2.86e-94
Identity = 141/143 (98.60%), Postives = 143/143 (100.00%), Query Frame = 0


Query: 1   MSDDEDDIPMDFSLDQSGADAHDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIE 60
           MSDD+DD+PMDFSLDQSGADAHDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIE
Sbjct: 159 MSDDDDDVPMDFSLDQSGADAHDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIE 218

Query: 61  DVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFI 120
           DVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFI
Sbjct: 219 DVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFI 278

Query: 121 NQRKRNWHSNSQSVTSLKSKRKR 143
           NQRKRNWHSNSQSVTSLKSKRKR
Sbjct: 279 NQRKRNWHSNSQSVTSLKSKRKR 301

[Close]

BLAST of Cucsat.G21124 vs. ExPASy TrEMBL
Match: A0A5A7TM21 (Homeobox protein knotted-1-like 7 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G003100 PE=3 SV=1)

HSP 1 Score: 286 bits (731), Expect = 8.43e-97
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0


Query: 1   MSDDEDDIPMDFSLDQSGADAHDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIE 60
           MSDDEDDIPMDFSLDQSGADAHDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIE
Sbjct: 49  MSDDEDDIPMDFSLDQSGADAHDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIE 108

Query: 61  DVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFI 120
           DVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFI
Sbjct: 109 DVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFI 168

Query: 121 NQRKRNWHSNSQSVTSLKSKRKR 143
           NQRKRNWHSNSQSVTSLKSKRKR
Sbjct: 169 NQRKRNWHSNSQSVTSLKSKRKR 191

[Close]

BLAST of Cucsat.G21124 vs. ExPASy TrEMBL
Match: A0A6J1DZV1 (homeobox protein knotted-1-like 7 OS=Momordica charantia OX=3673 GN=LOC111026106 PE=3 SV=1)

HSP 1 Score: 286 bits (731), Expect = 3.54e-96
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0


Query: 1   MSDDEDDIPMDFSLDQSGADAHDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIE 60
           MSDDEDDIPMDFSLDQSGADAHDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIE
Sbjct: 91  MSDDEDDIPMDFSLDQSGADAHDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIE 150

Query: 61  DVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFI 120
           DVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFI
Sbjct: 151 DVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFI 210

Query: 121 NQRKRNWHSNSQSVTSLKSKRKR 143
           NQRKRNWHSNSQSVTSLKSKRKR
Sbjct: 211 NQRKRNWHSNSQSVTSLKSKRKR 233

[Close]

BLAST of Cucsat.G21124 vs. ExPASy TrEMBL
Match: A0A1S3ATE3 (homeobox protein knotted-1-like 7 OS=Cucumis melo OX=3656 GN=LOC103482695 PE=3 SV=1)

HSP 1 Score: 286 bits (731), Expect = 3.31e-95
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0


Query: 1   MSDDEDDIPMDFSLDQSGADAHDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIE 60
           MSDDEDDIPMDFSLDQSGADAHDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIE
Sbjct: 158 MSDDEDDIPMDFSLDQSGADAHDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIE 217

Query: 61  DVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFI 120
           DVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFI
Sbjct: 218 DVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFI 277

Query: 121 NQRKRNWHSNSQSVTSLKSKRKR 143
           NQRKRNWHSNSQSVTSLKSKRKR
Sbjct: 278 NQRKRNWHSNSQSVTSLKSKRKR 300

[Close]

BLAST of Cucsat.G21124 vs. ExPASy TrEMBL
Match: A0A0A0KKD3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G156150 PE=3 SV=1)

HSP 1 Score: 286 bits (731), Expect = 3.42e-95
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0


Query: 1   MSDDEDDIPMDFSLDQSGADAHDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIE 60
           MSDDEDDIPMDFSLDQSGADAHDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIE
Sbjct: 159 MSDDEDDIPMDFSLDQSGADAHDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIE 218

Query: 61  DVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFI 120
           DVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFI
Sbjct: 219 DVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFI 278

Query: 121 NQRKRNWHSNSQSVTSLKSKRKR 143
           NQRKRNWHSNSQSVTSLKSKRKR
Sbjct: 279 NQRKRNWHSNSQSVTSLKSKRKR 301

[Close]

BLAST of Cucsat.G21124 vs. ExPASy TrEMBL
Match: A0A7J9KHF5 (Uncharacterized protein OS=Gossypium armourianum OX=34283 GN=Goarm_022387 PE=3 SV=1)

HSP 1 Score: 276 bits (707), Expect = 7.43e-94
Identity = 137/143 (95.80%), Postives = 140/143 (97.90%), Query Frame = 0


Query: 1   MSDDEDDIPMDFSLDQSGADAHDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIE 60
           MSDDEDD+ MDFSLDQSG D HD+MGFGPL+PTESERSLMERVRQELKIELKQGFKSRIE
Sbjct: 1   MSDDEDDMQMDFSLDQSGTDGHDLMGFGPLIPTESERSLMERVRQELKIELKQGFKSRIE 60

Query: 61  DVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFI 120
           DVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFI
Sbjct: 61  DVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFI 120

Query: 121 NQRKRNWHSNSQSVTSLKSKRKR 143
           NQRKRNWHSNSQSVTSLKSKRKR
Sbjct: 121 NQRKRNWHSNSQSVTSLKSKRKR 143

The following BLAST results are available for this feature:

BLAST of Cucsat.G21124 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FPQ8	2.7e-68	88.97	Homeobox protein knotted-1-like 7 OS=Arabidopsis thaliana OX=3702 GN=KNAT7 PE=1 ...	[more]
P46606	2.3e-67	88.28	Homeobox protein HD1 OS=Brassica napus OX=3708 GN=HD1 PE=2 SV=1	[more]
Q94LW3	6.4e-62	84.72	Homeobox protein knotted-1-like 3 OS=Oryza sativa subsp. japonica OX=39947 GN=HO...	[more]
O04136	1.9e-58	78.47	Homeobox protein knotted-1-like 3 OS=Malus domestica OX=3750 PE=2 SV=1	[more]
P48000	1.7e-54	75.52	Homeobox protein knotted-1-like 3 OS=Arabidopsis thaliana OX=3702 GN=KNAT3 PE=1 ...	[more]

BLAST of Cucsat.G21124 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0042807.1	1.74e-96	100.00	homeobox protein knotted-1-like 7 [Cucumis melo var. makuwa]	[more]
XP_022159793.1	7.31e-96	100.00	homeobox protein knotted-1-like 7 [Momordica charantia]	[more]
XP_008437194.1	6.83e-95	100.00	PREDICTED: homeobox protein knotted-1-like 7 [Cucumis melo]	[more]
XP_004143939.1	7.05e-95	100.00	homeobox protein knotted-1-like 7 [Cucumis sativus] >KGN50155.1 hypothetical pro...	[more]
XP_038875957.1	2.86e-94	98.60	homeobox protein knotted-1-like 7 [Benincasa hispida]	[more]

BLAST of Cucsat.G21124 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TM21	8.43e-97	100.00	Homeobox protein knotted-1-like 7 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A6J1DZV1	3.54e-96	100.00	homeobox protein knotted-1-like 7 OS=Momordica charantia OX=3673 GN=LOC111026106...	[more]
A0A1S3ATE3	3.31e-95	100.00	homeobox protein knotted-1-like 7 OS=Cucumis melo OX=3656 GN=LOC103482695 PE=3 S...	[more]
A0A0A0KKD3	3.42e-95	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G156150 PE=3 SV=1	[more]
A0A7J9KHF5	7.43e-94	95.80	Uncharacterized protein OS=Gossypium armourianum OX=34283 GN=Goarm_022387 PE=3 S...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005541	KNOX2	SMART	SM01256	KNOX2_2	coord: 25..80 e-value: 1.9E-24 score: 97.2
IPR005541	KNOX2	PFAM	PF03791	KNOX2	coord: 29..79 e-value: 4.5E-18 score: 64.5
None	No IPR available	GENE3D	1.10.10.60		coord: 125..207 e-value: 4.1E-7 score: 31.9
None	No IPR available	PANTHER	PTHR11850	HOMEOBOX PROTEIN TRANSCRIPTION FACTORS	coord: 21..189
None	No IPR available	PANTHER	PTHR11850:SF315	HOMEOBOX PROTEIN KNOTTED-1-LIKE 7	coord: 21..189
IPR005539	ELK domain	PROSITE	PS51213	ELK	coord: 136..156 score: 9.131822

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G21124.T1	Cucsat.G21124.T1	mRNA
Cucsat.G21124.T2	Cucsat.G21124.T2	mRNA
Cucsat.G21124.T3	Cucsat.G21124.T3	mRNA
Cucsat.G21124.T5	Cucsat.G21124.T5	mRNA
Cucsat.G21124.T7	Cucsat.G21124.T7	mRNA
Cucsat.G21124.T6	Cucsat.G21124.T6	mRNA
Cucsat.G21124.T4	Cucsat.G21124.T4	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010192	mucilage biosynthetic process
biological_process	GO:0080001	mucilage extrusion from seed coat
biological_process	GO:0045892	negative regulation of transcription, DNA-templated
biological_process	GO:2000652	regulation of secondary cell wall biogenesis
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0010214	seed coat development
biological_process	GO:0080112	seed growth
biological_process	GO:0010089	xylem development
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0000976	transcription cis-regulatory region binding