Cucsat.G20647.T2 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G20647.T2
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Protein AMN1-like protein
Location	ctg62: 580487 .. 583908 (-)
RNA-Seq Expression	Cucsat.G20647.T2
Synteny	Cucsat.G20647.T2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTCCGTCGTCGCTATAACTTGATTGTTCATTACCACCGTCAATGTCTTTTTCTCTCTTCTTCGTTTTTTCTCATTTCTTCTCGTTTCCCTAATCCCCTAATTTCATGGAAACAATCGAAGAACCCAATATCATTGCGAAAACTTTTCTAAAACTTGATTTGAATCAGAAATCCAGTTCCCACCCTACTTATTCTAATACCTTCGTTAAATCTGCGTCTCTCGATTTGGATCAGAATTCCTGTTTCAAGCCTACTGCATCTCAATTCTCCGGTTAATCCCCTCTCTTTCTCACTCCTTCTATCGACTTTGAAATCGCAACTTGAGGGAATTATTGGGTTTTCTTTGTTTCTTCTAATGATTTGGATTTCAATTGATTGGTTCTCAATTTTTGGAGAAAACAAGTAATGTTTTCAGCCCTAATTTGGGGAACCAATTTGCTTACTTTCTGGCGTTTGCGTGTTGTACACATATGTTTTGTTTTGCACTCGTGTGATTCGAGTTCTTGTTTTGGATACAGGAACAGGATTGGCCTTTGAAAGGAAGAAACCTCCAAATTTAGTCAGTTTGTGCGTTGGGGTTATTGGCAAGCATTTGGAAGATATAATTCCCGACTTAGATGTGATTAGTGCCAACTTTCCGTCAGATGTAAAGGTTGGTTTGGTTTGGAATTTGTTCTTTATGTTCAACTAACTCGACCAAATTGAATTAATTTAAGTCCATTTTGTTGAACTTTTAGATTTCTCCTTGCACTCTTGAACGTTATTTGGATTTGGGTAGATGAATTTAGTTCAGAAAGAGGCCATTTTGTGTTCTGCTGAGAAAATATGATTAACTAACTTATATTTGATTAAGAAAAAAATATGGTTTAGTTGTATAGCCATTTCTATATATCGATGCTGTTCTCAGCTTCATGTTTTGACTGGAATTCATAACATCAATATTCCATGCCATTAATGTGTTAAATGCAATTATGCAACAGTAGAATTTATGTTGGGCTGATAAGTCTAACATTTTTTAAACACCAACTATCCACCAGTTGACTGGAATAGATAAGTTCTAGTTTTACTTTTAACTTTTACGACCTTACATGAACCGGTTATACTCTGTAGGTTGTTCAATGGTGTGGTATCCTTGAGTTCAATAGATAAGGTTAAGTATTGAGAAATTTTTAAATGTACATTGGACAAAATTTATACAAATTTAAATGTATAGTGGCAAAAATTATGATTTGACGAAGAAATATTTCAAGAGCTTTTGTATGTAGTACTTCCTTCTTCTCTTATGAGGCTTGGGTTATTCCAATCTATTATGCTGTAATTGTATACTGTTAATAGAAAACTTGTCATTTGATGTGTGTTCTTTATTTGTTTTCTGAAATTATAGCAATCTATAGCAGCAATTGCACGAAGAAGAGAGTTACTGAACGATGATGTTATTATCTCCCTAGTAGATAGTTCGTGGGAAACCCTGGATGTTTCTGGTTCAGAAGTTTCTGATTTTGGGTTAGCAGAAATTGGCAAGACATGCAAATCTCTTAGAGCTGTGGATATTAGGTATGCAGGACACAAGTTCTGTTGATGAACGAACTTCTTTAATGTTTTCTTTATTTTCTGTTGCTGATTAGCATACTTGAAGTTTTTATATTTCTTCACTATGTTGACCTAGCAAGGTTCTACCTTTTAGTTGCAAATTCACCATTTGTTTTATTTTGAGTATCTTTTGATTAAGAAAAGTTTTAATGCAGTCGATGCAACAAGATAACAGCTGCTGGTGTTTCTGAGCTCGTTCAGCATTGTTGTTCCTTGGAAACACTACGTTGCGGGTAAGTACCTACTCCCCTGCCACTGATACACTTTTGATATATATATTATTGGTTTTCTTACATCTATTTGATATGCTAGTTCCGAGAATTCATAGATAGTTTACTGCCAAGATGTTGCTATCAATTCCACTTATTTTTCAAAGTATCTTCAAGGAAAACTTAACAAAATTCCAGTTTCATATGATATATTGATGTCTTATTCGTCTATAATAATACGTAGAGCTAAGGGTCCAAGGCTTTGTTTACTTAATGATTAGAACACAAGCTTGTTGATTTCCTAATTTTGTGTGTGCTGTCATTCTGGCTCATAACAGGATATGTATATGTATGTAGTTTGTGTTTTGACTAGTAGTAATAACCTCATAACAGGATATGAACAAAAATGTTGCAGAGGGTGTCCGAGAAGTGATTACACGGCACGAAGGTCCTTGGATATTTTTAAACCAAGGCTGGATGATATAGAAGGAGATTCATGGGAGGAGCTTGATACAGCTGAAATTGCCAATGGGGCACAATCCCTTCGGTGGTTGGTCTGGGTAGGGTGTCTTCTATGATCTATCCCCAATTTTGTATTTATTTTCATTATTTTCCTGCTTTCCTTTTTGGATAAAGAAAAATTACATCATTCTCTTAGGAAGTATAAGAAAGTTTGTTGATTAGGGATCATATGGTTAGATAGGTGAGTACTTCTATCATTTTGCCAAGTGCTGTCTGTGATCTATTTGTAAGGGTGAAATGTCTACTTTCCTGAAAATGTGCCTCAAGTGTAGGTTCAATGACGTATCTGGCATTTCGACAGCAAGTGAAATACAAATTCCAGTTCTTTTTTACTTCATGGTGGTCGTAGAAGTGGGATAATCTTGCATCCTTGAAAGAGTCCCACCAATTCTAATCGTTCATGCTTTCTTTTTCACTTCCTGCAGCCAAAAGTAGATAAAGATTCCTTGGAGATTTTCTCCACAGAATGCCCGCGCATTACAATAAACCCAAAGCCATCGCCTTTCGGTTTCAGGGGGAAGCAAGTTCCAGGGGAAGCATTGCCAAACATTGCATTAGATGAACACACCATAGTTGATATTGATCCCAAAACATGGGCAGTGGGCAGATCCACAGCAAGGGCCCCAATTTCTCCATCAAACACCTCAGAGTTGTCTTTAGCTGAGAAATTCAGACTTGCATTTGTGGAAAGGGACACTCGGTTAGCTCCAAAACGAGCTAAAAATGCAAGGCAACATCAAAGGCGTGCGGAGAGGGAGTGGATGACGACGAGTACAAGAGCCAAGGCACTGGCTTTGGCCTCTCAAGCAAGTAAAAGTTTGCAGAGTCGTACTTAGCTATTAGCTACTACTGTTTCTCTTTAAGATTTCATTATCAATAACATACAAGGTTTGACCTCTTCATCGATTCTATACCATTATGAGATCGGGTTTTAAGATTGATAAATGTATTATTACCATAGAAAAAGTAATTTCTAAAGTATCTGGCTCTTTTTCTTGAATAGGCTTGCCTATGCTCTATCATTTGAGAATTGTACATACATGTATGTAGTTGGAGATGGGAAGCAGGATATAAGTAGAGATAAAGACGAGGAGCTATACG

Coding sequence (CDS)

ATGGAAACAATCGAAGAACCCAATATCATTGCGAAAACTTTTCTAAAACTTGATTTGAATCAGAAATCCAGTTCCCACCCTACTTATTCTAATACCTTCGTTAAATCTGCGTCTCTCGATTTGGATCAGAATTCCTGTTTCAAGCCTACTGCATCTCAATTCTCCGGAACAGGATTGGCCTTTGAAAGGAAGAAACCTCCAAATTTAGTCAGTTTGTGCGTTGGGGTTATTGGCAAGCATTTGGAAGATATAATTCCCGACTTAGATGTGATTAGTGCCAACTTTCCGTCAGATGTAAAGCAATCTATAGCAGCAATTGCACGAAGAAGAGAGTTACTGAACGATGATGTTATTATCTCCCTAGTAGATAGTTCGTGGGAAACCCTGGATGTTTCTGGTTCAGAAGTTTCTGATTTTGGGTTAGCAGAAATTGGCAAGACATGCAAATCTCTTAGAGCTGTGGATATTAGTCGATGCAACAAGATAACAGCTGCTGGTGTTTCTGAGCTCGTTCAGCATTGTTGTTCCTTGGAAACACTACGTTGCGGGATATGA

Protein sequence

METIEEPNIIAKTFLKLDLNQKSSSHPTYSNTFVKSASLDLDQNSCFKPTASQFSGTGLAFERKKPPNLVSLCVGVIGKHLEDIIPDLDVISANFPSDVKQSIAAIARRRELLNDDVIISLVDSSWETLDVSGSEVSDFGLAEIGKTCKSLRAVDISRCNKITAAGVSELVQHCCSLETLRCGI

Homology

[Close]

BLAST of Cucsat.G20647.T2 vs. NCBI nr
Match: XP_004139789.1 (uncharacterized protein LOC101203553 [Cucumis sativus] >KGN44164.1 hypothetical protein Csa_015808 [Cucumis sativus])

HSP 1 Score: 362 bits (928), Expect = 3.88e-123
Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0


Query: 1   METIEEPNIIAKTFLKLDLNQKSSSHPTYSNTFVKSASLDLDQNSCFKPTASQFSGTGLA 60
           METIEEPNIIAKTFLKLDLNQKSSSHPTYSNTFVKSASLDLDQNSCFKPTASQFSGTGLA
Sbjct: 1   METIEEPNIIAKTFLKLDLNQKSSSHPTYSNTFVKSASLDLDQNSCFKPTASQFSGTGLA 60

Query: 61  FERKKPPNLVSLCVGVIGKHLEDIIPDLDVISANFPSDVKQSIAAIARRRELLNDDVIIS 120
           FERKKPPNLVSLCVGVIGKHLEDIIPDLDVISANFPSDVKQSIAAIARRRELLNDDVIIS
Sbjct: 61  FERKKPPNLVSLCVGVIGKHLEDIIPDLDVISANFPSDVKQSIAAIARRRELLNDDVIIS 120

Query: 121 LVDSSWETLDVSGSEVSDFGLAEIGKTCKSLRAVDISRCNKITAAGVSELVQHCCSLETL 180
           LVDSSWETLDVSGSEVSDFGLAEIGKTCKSLRAVDISRCNKITAAGVSELVQHCCSLETL
Sbjct: 121 LVDSSWETLDVSGSEVSDFGLAEIGKTCKSLRAVDISRCNKITAAGVSELVQHCCSLETL 180

Query: 181 RCG 183
           RCG
Sbjct: 181 RCG 183

[Close]

BLAST of Cucsat.G20647.T2 vs. NCBI nr
Match: XP_008447736.1 (PREDICTED: uncharacterized protein LOC103490139 [Cucumis melo])

HSP 1 Score: 329 bits (844), Expect = 2.09e-110
Identity = 171/183 (93.44%), Postives = 173/183 (94.54%), Query Frame = 0


Query: 1   METIEEPNIIAKTFLKLDLNQKSSSHPTYSNTFVKSASLDLDQNSCFKPTASQFSGTGLA 60
           METIEE   IAKTF+KLDLNQKSSS PTYSNTFVKSAS DLDQ SCFKPTASQFS   LA
Sbjct: 1   METIEEAKNIAKTFVKLDLNQKSSSQPTYSNTFVKSASPDLDQKSCFKPTASQFSR--LA 60

Query: 61  FERKKPPNLVSLCVGVIGKHLEDIIPDLDVISANFPSDVKQSIAAIARRRELLNDDVIIS 120
           FERKKPPNLVSLCVGVIGKHLEDIIPDLD ISANFPSDVKQSIAA+ARRRELLNDDVIIS
Sbjct: 61  FERKKPPNLVSLCVGVIGKHLEDIIPDLDEISANFPSDVKQSIAAVARRRELLNDDVIIS 120

Query: 121 LVDSSWETLDVSGSEVSDFGLAEIGKTCKSLRAVDISRCNKITAAGVSELVQHCCSLETL 180
           LVDSSWETLDVSGSEVSDFGLAEIGKTCKSLRAVDISRCNKITAAGVSELVQHCCSLETL
Sbjct: 121 LVDSSWETLDVSGSEVSDFGLAEIGKTCKSLRAVDISRCNKITAAGVSELVQHCCSLETL 180

Query: 181 RCG 183
           RCG
Sbjct: 181 RCG 181

[Close]

BLAST of Cucsat.G20647.T2 vs. NCBI nr
Match: KAA0025152.1 (protein AMN1-like protein [Cucumis melo var. makuwa] >TYK23110.1 protein AMN1-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 328 bits (840), Expect = 8.45e-110
Identity = 170/183 (92.90%), Postives = 172/183 (93.99%), Query Frame = 0


Query: 1   METIEEPNIIAKTFLKLDLNQKSSSHPTYSNTFVKSASLDLDQNSCFKPTASQFSGTGLA 60
           METIEE   IAKTF+K DLNQKSSS PTYSNTFVKSAS DLDQ SCFKPTASQFS   LA
Sbjct: 1   METIEEAKNIAKTFVKFDLNQKSSSQPTYSNTFVKSASPDLDQKSCFKPTASQFSR--LA 60

Query: 61  FERKKPPNLVSLCVGVIGKHLEDIIPDLDVISANFPSDVKQSIAAIARRRELLNDDVIIS 120
           FERKKPPNLVSLCVGVIGKHLEDIIPDLD ISANFPSDVKQSIAA+ARRRELLNDDVIIS
Sbjct: 61  FERKKPPNLVSLCVGVIGKHLEDIIPDLDEISANFPSDVKQSIAAVARRRELLNDDVIIS 120

Query: 121 LVDSSWETLDVSGSEVSDFGLAEIGKTCKSLRAVDISRCNKITAAGVSELVQHCCSLETL 180
           LVDSSWETLDVSGSEVSDFGLAEIGKTCKSLRAVDISRCNKITAAGVSELVQHCCSLETL
Sbjct: 121 LVDSSWETLDVSGSEVSDFGLAEIGKTCKSLRAVDISRCNKITAAGVSELVQHCCSLETL 180

Query: 181 RCG 183
           RCG
Sbjct: 181 RCG 181

[Close]

BLAST of Cucsat.G20647.T2 vs. NCBI nr
Match: XP_038896648.1 (uncharacterized protein LOC120084911 [Benincasa hispida])

HSP 1 Score: 305 bits (780), Expect = 1.14e-100
Identity = 152/183 (83.06%), Postives = 166/183 (90.71%), Query Frame = 0


Query: 1   METIEEPNIIAKTFLKLDLNQKSSSHPTYSNTFVKSASLDLDQNSCFKPTASQFSGTGLA 60
           MET++E  IIAKTF+KLDLNQKS+S P YSN F  S SLDL+Q S FKPT SQ SGTGL 
Sbjct: 1   METLKEAKIIAKTFVKLDLNQKSNSKPAYSNPFATSTSLDLNQKSSFKPTTSQSSGTGLP 60

Query: 61  FERKKPPNLVSLCVGVIGKHLEDIIPDLDVISANFPSDVKQSIAAIARRRELLNDDVIIS 120
           FERKKPP+LVSLCVGVIGKHLEDIIPDLD ISANFPSDVK+S+AA+ARRR+LL+DD+IIS
Sbjct: 61  FERKKPPSLVSLCVGVIGKHLEDIIPDLDEISANFPSDVKKSLAAVARRRKLLDDDIIIS 120

Query: 121 LVDSSWETLDVSGSEVSDFGLAEIGKTCKSLRAVDISRCNKITAAGVSELVQHCCSLETL 180
           L DSSWETL+VSGSEVSDFGLAE+ KTCK LRAVDISRCNKITAAGVSELVQHCCSLETL
Sbjct: 121 LADSSWETLNVSGSEVSDFGLAEVAKTCKFLRAVDISRCNKITAAGVSELVQHCCSLETL 180

Query: 181 RCG 183
           RCG
Sbjct: 181 RCG 183

[Close]

BLAST of Cucsat.G20647.T2 vs. NCBI nr
Match: XP_023525892.1 (uncharacterized protein LOC111789373 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 280 bits (716), Expect = 5.71e-91
Identity = 144/183 (78.69%), Postives = 157/183 (85.79%), Query Frame = 0


Query: 1   METIEEPNIIAKTFLKLDLNQKSSSHPTYSNTFVKSASLDLDQNSCFKPTASQFSGTGLA 60
           METIEE  II+KTF KL+LNQK SS PT S+ F +S SLD    S FK T SQ SGTGL 
Sbjct: 1   METIEEAKIISKTFEKLNLNQKFSSKPTSSDPFAESLSLDSSHKSSFKATTSQSSGTGLL 60

Query: 61  FERKKPPNLVSLCVGVIGKHLEDIIPDLDVISANFPSDVKQSIAAIARRRELLNDDVIIS 120
           FERKK P+LVSLCVG+IGKHLEDII DLD ISA+FPSDVKQSI AIARRR+LL+DDV+IS
Sbjct: 61  FERKKTPSLVSLCVGLIGKHLEDIISDLDEISASFPSDVKQSITAIARRRKLLDDDVVIS 120

Query: 121 LVDSSWETLDVSGSEVSDFGLAEIGKTCKSLRAVDISRCNKITAAGVSELVQHCCSLETL 180
           L DSSWETLDVSGS+VSDFGL ++ KTCK LRAVDISRCNKITAAGVSELVQHCCSLETL
Sbjct: 121 LADSSWETLDVSGSDVSDFGLTKVAKTCKFLRAVDISRCNKITAAGVSELVQHCCSLETL 180

Query: 181 RCG 183
           RCG
Sbjct: 181 RCG 183

[Close]

BLAST of Cucsat.G20647.T2 vs. ExPASy TrEMBL
Match: A0A0A0K5D7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G210580 PE=4 SV=1)

HSP 1 Score: 362 bits (928), Expect = 1.88e-123
Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0


Query: 1   METIEEPNIIAKTFLKLDLNQKSSSHPTYSNTFVKSASLDLDQNSCFKPTASQFSGTGLA 60
           METIEEPNIIAKTFLKLDLNQKSSSHPTYSNTFVKSASLDLDQNSCFKPTASQFSGTGLA
Sbjct: 1   METIEEPNIIAKTFLKLDLNQKSSSHPTYSNTFVKSASLDLDQNSCFKPTASQFSGTGLA 60

Query: 61  FERKKPPNLVSLCVGVIGKHLEDIIPDLDVISANFPSDVKQSIAAIARRRELLNDDVIIS 120
           FERKKPPNLVSLCVGVIGKHLEDIIPDLDVISANFPSDVKQSIAAIARRRELLNDDVIIS
Sbjct: 61  FERKKPPNLVSLCVGVIGKHLEDIIPDLDVISANFPSDVKQSIAAIARRRELLNDDVIIS 120

Query: 121 LVDSSWETLDVSGSEVSDFGLAEIGKTCKSLRAVDISRCNKITAAGVSELVQHCCSLETL 180
           LVDSSWETLDVSGSEVSDFGLAEIGKTCKSLRAVDISRCNKITAAGVSELVQHCCSLETL
Sbjct: 121 LVDSSWETLDVSGSEVSDFGLAEIGKTCKSLRAVDISRCNKITAAGVSELVQHCCSLETL 180

Query: 181 RCG 183
           RCG
Sbjct: 181 RCG 183

[Close]

BLAST of Cucsat.G20647.T2 vs. ExPASy TrEMBL
Match: A0A1S3BJ08 (uncharacterized protein LOC103490139 OS=Cucumis melo OX=3656 GN=LOC103490139 PE=4 SV=1)

HSP 1 Score: 329 bits (844), Expect = 1.01e-110
Identity = 171/183 (93.44%), Postives = 173/183 (94.54%), Query Frame = 0


Query: 1   METIEEPNIIAKTFLKLDLNQKSSSHPTYSNTFVKSASLDLDQNSCFKPTASQFSGTGLA 60
           METIEE   IAKTF+KLDLNQKSSS PTYSNTFVKSAS DLDQ SCFKPTASQFS   LA
Sbjct: 1   METIEEAKNIAKTFVKLDLNQKSSSQPTYSNTFVKSASPDLDQKSCFKPTASQFSR--LA 60

Query: 61  FERKKPPNLVSLCVGVIGKHLEDIIPDLDVISANFPSDVKQSIAAIARRRELLNDDVIIS 120
           FERKKPPNLVSLCVGVIGKHLEDIIPDLD ISANFPSDVKQSIAA+ARRRELLNDDVIIS
Sbjct: 61  FERKKPPNLVSLCVGVIGKHLEDIIPDLDEISANFPSDVKQSIAAVARRRELLNDDVIIS 120

Query: 121 LVDSSWETLDVSGSEVSDFGLAEIGKTCKSLRAVDISRCNKITAAGVSELVQHCCSLETL 180
           LVDSSWETLDVSGSEVSDFGLAEIGKTCKSLRAVDISRCNKITAAGVSELVQHCCSLETL
Sbjct: 121 LVDSSWETLDVSGSEVSDFGLAEIGKTCKSLRAVDISRCNKITAAGVSELVQHCCSLETL 180

Query: 181 RCG 183
           RCG
Sbjct: 181 RCG 181

[Close]

BLAST of Cucsat.G20647.T2 vs. ExPASy TrEMBL
Match: A0A5D3DI95 (Protein AMN1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G001000 PE=4 SV=1)

HSP 1 Score: 328 bits (840), Expect = 4.09e-110
Identity = 170/183 (92.90%), Postives = 172/183 (93.99%), Query Frame = 0


Query: 1   METIEEPNIIAKTFLKLDLNQKSSSHPTYSNTFVKSASLDLDQNSCFKPTASQFSGTGLA 60
           METIEE   IAKTF+K DLNQKSSS PTYSNTFVKSAS DLDQ SCFKPTASQFS   LA
Sbjct: 1   METIEEAKNIAKTFVKFDLNQKSSSQPTYSNTFVKSASPDLDQKSCFKPTASQFSR--LA 60

Query: 61  FERKKPPNLVSLCVGVIGKHLEDIIPDLDVISANFPSDVKQSIAAIARRRELLNDDVIIS 120
           FERKKPPNLVSLCVGVIGKHLEDIIPDLD ISANFPSDVKQSIAA+ARRRELLNDDVIIS
Sbjct: 61  FERKKPPNLVSLCVGVIGKHLEDIIPDLDEISANFPSDVKQSIAAVARRRELLNDDVIIS 120

Query: 121 LVDSSWETLDVSGSEVSDFGLAEIGKTCKSLRAVDISRCNKITAAGVSELVQHCCSLETL 180
           LVDSSWETLDVSGSEVSDFGLAEIGKTCKSLRAVDISRCNKITAAGVSELVQHCCSLETL
Sbjct: 121 LVDSSWETLDVSGSEVSDFGLAEIGKTCKSLRAVDISRCNKITAAGVSELVQHCCSLETL 180

Query: 181 RCG 183
           RCG
Sbjct: 181 RCG 181

[Close]

BLAST of Cucsat.G20647.T2 vs. ExPASy TrEMBL
Match: A0A6J1FL68 (uncharacterized protein LOC111446756 OS=Cucurbita moschata OX=3662 GN=LOC111446756 PE=4 SV=1)

HSP 1 Score: 279 bits (714), Expect = 5.55e-91
Identity = 143/183 (78.14%), Postives = 157/183 (85.79%), Query Frame = 0


Query: 1   METIEEPNIIAKTFLKLDLNQKSSSHPTYSNTFVKSASLDLDQNSCFKPTASQFSGTGLA 60
           METIEE  II+KTF KL+LNQK SS PT S+ F KS SLD    S FK T SQ SGTGL 
Sbjct: 1   METIEETKIISKTFEKLNLNQKFSSKPTSSDPFAKSLSLDSSHESSFKATPSQSSGTGLP 60

Query: 61  FERKKPPNLVSLCVGVIGKHLEDIIPDLDVISANFPSDVKQSIAAIARRRELLNDDVIIS 120
           FERKK P+LVSLCVG+IGKHLEDII DLD ISA+FPSDVKQSI AIARRR+LL+DDV+IS
Sbjct: 61  FERKKTPSLVSLCVGLIGKHLEDIISDLDEISASFPSDVKQSITAIARRRKLLDDDVVIS 120

Query: 121 LVDSSWETLDVSGSEVSDFGLAEIGKTCKSLRAVDISRCNKITAAGVSELVQHCCSLETL 180
           L DSSWETLDVSGS+VSDFGL ++ +TCK LRAVDISRCNKITAAG+SELVQHCCSLETL
Sbjct: 121 LADSSWETLDVSGSDVSDFGLTKVAQTCKLLRAVDISRCNKITAAGISELVQHCCSLETL 180

Query: 181 RCG 183
           RCG
Sbjct: 181 RCG 183

[Close]

BLAST of Cucsat.G20647.T2 vs. ExPASy TrEMBL
Match: A0A6J1IWS7 (uncharacterized protein LOC111480610 OS=Cucurbita maxima OX=3661 GN=LOC111480610 PE=4 SV=1)

HSP 1 Score: 275 bits (702), Expect = 3.64e-89
Identity = 141/183 (77.05%), Postives = 155/183 (84.70%), Query Frame = 0


Query: 1   METIEEPNIIAKTFLKLDLNQKSSSHPTYSNTFVKSASLDLDQNSCFKPTASQFSGTGLA 60
           METIEE  II+KTF KL+LNQK SS PT S+ F KS  LD    S FK T SQ SGTG  
Sbjct: 1   METIEETKIISKTFEKLNLNQKYSSKPTSSDPFAKSLFLDSSHKSSFKATTSQSSGTGFP 60

Query: 61  FERKKPPNLVSLCVGVIGKHLEDIIPDLDVISANFPSDVKQSIAAIARRRELLNDDVIIS 120
           FERKK P+LVSLCVG++GKHLEDII DLD ISA+FPSDVKQSI AIARRR+LL+DDV+IS
Sbjct: 61  FERKKTPSLVSLCVGLVGKHLEDIISDLDEISASFPSDVKQSITAIARRRKLLDDDVVIS 120

Query: 121 LVDSSWETLDVSGSEVSDFGLAEIGKTCKSLRAVDISRCNKITAAGVSELVQHCCSLETL 180
           L DSSWETLDVSGS+VSDFGL ++ +TCK LRAVDISRCNKITAAGVSELVQHCCSLETL
Sbjct: 121 LADSSWETLDVSGSDVSDFGLTKVVQTCKFLRAVDISRCNKITAAGVSELVQHCCSLETL 180

Query: 181 RCG 183
           RCG
Sbjct: 181 RCG 183

The following BLAST results are available for this feature:

BLAST of Cucsat.G20647.T2 vs.


Match Name	E-value	Identity	Description

BLAST of Cucsat.G20647.T2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139789.1	3.88e-123	100.00	uncharacterized protein LOC101203553 [Cucumis sativus] >KGN44164.1 hypothetical ...	[more]
XP_008447736.1	2.09e-110	93.44	PREDICTED: uncharacterized protein LOC103490139 [Cucumis melo]	[more]
KAA0025152.1	8.45e-110	92.90	protein AMN1-like protein [Cucumis melo var. makuwa] >TYK23110.1 protein AMN1-li...	[more]
XP_038896648.1	1.14e-100	83.06	uncharacterized protein LOC120084911 [Benincasa hispida]	[more]
XP_023525892.1	5.71e-91	78.69	uncharacterized protein LOC111789373 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cucsat.G20647.T2 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K5D7	1.88e-123	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G210580 PE=4 SV=1	[more]
A0A1S3BJ08	1.01e-110	93.44	uncharacterized protein LOC103490139 OS=Cucumis melo OX=3656 GN=LOC103490139 PE=...	[more]
A0A5D3DI95	4.09e-110	92.90	Protein AMN1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A6J1FL68	5.55e-91	78.14	uncharacterized protein LOC111446756 OS=Cucurbita moschata OX=3662 GN=LOC1114467...	[more]
A0A6J1IWS7	3.64e-89	77.05	uncharacterized protein LOC111480610 OS=Cucurbita maxima OX=3661 GN=LOC111480610...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006553	Leucine-rich repeat, cysteine-containing subtype	SMART	SM00367	LRR_CC_2	coord: 148..173 e-value: 0.0061 score: 25.8 coord: 123..147 e-value: 660.0 score: 0.3
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10	Ribonuclease Inhibitor	coord: 38..183 e-value: 1.0E-12 score: 49.1
None	No IPR available	PANTHER	PTHR13318	UNCHARACTERIZED	coord: 35..182
None	No IPR available	PANTHER	PTHR13318:SF119	OS06G0679700 PROTEIN	coord: 35..182
None	No IPR available	SUPERFAMILY	52047	RNI-like	coord: 15..180

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G20647	Cucsat.G20647	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G20647.T2.E1	Cucsat.G20647.T2.E1	exon
Cucsat.G20647.T2.E2	Cucsat.G20647.T2.E2	exon
Cucsat.G20647.T2.E3	Cucsat.G20647.T2.E3	exon
Cucsat.G20647.T2.E4	Cucsat.G20647.T2.E4	exon
Cucsat.G20647.T2.E5	Cucsat.G20647.T2.E5	exon
Cucsat.G20647.T2.E6	Cucsat.G20647.T2.E6	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G20647.T2.C5	Cucsat.G20647.T2.C5	CDS
Cucsat.G20647.T2.C4	Cucsat.G20647.T2.C4	CDS
Cucsat.G20647.T2.C3	Cucsat.G20647.T2.C3	CDS
Cucsat.G20647.T2.C2	Cucsat.G20647.T2.C2	CDS
Cucsat.G20647.T2.C1	Cucsat.G20647.T2.C1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G20647.T2	Cucsat.G20647.T2-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031146	SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
cellular_component	GO:0019005	SCF ubiquitin ligase complex