Cucsat.G20647 (gene) Cucumber (B10) v3

Overview
NameCucsat.G20647
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionProtein AMN1-like protein
Locationctg62: 580487 .. 583465 (-)
RNA-Seq ExpressionCucsat.G20647
SyntenyCucsat.G20647
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AACTTGATTGTTCATTACCACCGTCAATGTCTTTTTCTCTCTTCTTCGTTTTTTCTCATTTCTTCTCGTTTCCCTAATCCCCTAATTTCATGGAAACAATCGAAGAACCCAATATCATTGCGAAAACTTTTCTAAAACTTGATTTGAATCAGAAATCCAGTTCCCACCCTACTTATTCTAATACCTTCGTTAAATCTGCGTCTCTCGATTTGGATCAGAATTCCTGTTTCAAGCCTACTGCATCTCAATTCTCCGGTTAATCCCCTCTCTTTCTCACTCCTTCTATCGACTTTGAAATCGCAACTTGAGGGAATTATTGGGTTTTCTTTGTTTCTTCTAATGATTTGGATTTCAATTGATTGGTTCTCAATTTTTGGAGAAAACAAGTAATGTTTTCAGCCCTAATTTGGGGAACCAATTTGCTTACTTTCTGGCGTTTGCGTGTTGTACACATATGTTTTGTTTTGCACTCGTGTGATTCGAGTTCTTGTTTTGGATACAGGAACAGGATTGGCCTTTGAAAGGAAGAAACCTCCAAATTTAGTCAGTTTGTGCGTTGGGGTTATTGGCAAGCATTTGGAAGATATAATTCCCGACTTAGATGTGATTAGTGCCAACTTTCCGTCAGATGTAAAGGTTGGTTTGGTTTGGAATTTGTTCTTTATGTTCAACTAACTCGACCAAATTGAATTAATTTAAGTCCATTTTGTTGAACTTTTAGATTTCTCCTTGCACTCTTGAACGTTATTTGGATTTGGGTAGATGAATTTAGTTCAGAAAGAGGCCATTTTGTGTTCTGCTGAGAAAATATGATTAACTAACTTATATTTGATTAAGAAAAAAATATGGTTTAGTTGTATAGCCATTTCTATATATCGATGCTGTTCTCAGCTTCATGTTTTGACTGGAATTCATAACATCAATATTCCATGCCATTAATGTGTTAAATGCAATTATGCAACAGTAGAATTTATGTTGGGCTGATAAGTCTAACATTTTTTAAACACCAACTATCCACCAGTTGACTGGAATAGATAAGTTCTAGTTTTACTTTTAACTTTTACGACCTTACATGAACCGGTTATACTCTGTAGGTTGTTCAATGGTGTGGTATCCTTGAGTTCAATAGATAAGGTTAAGTATTGAGAAATTTTTAAATGTACATTGGACAAAATTTATACAAATTTAAATGTATAGTGGCAAAAATTATGATTTGACGAAGAAATATTTCAAGAGCTTTTGTATGTAGTACTTCCTTCTTCTCTTATGAGGCTTGGGTTATTCCAATCTATTATGCTGTAATTGTATACTGTTAATAGAAAACTTGTCATTTGATGTGTGTTCTTTATTTGTTTTCTGAAATTATAGCAATCTATAGCAGCAATTGCACGAAGAAGAGAGTTACTGAACGATGATGTTATTATCTCCCTAGTAGATAGTTCGTGGGAAACCCTGGATGTTTCTGGTTCAGAAGTTTCTGATTTTGGGTTAGCAGAAATTGGCAAGACATGCAAATCTCTTAGAGCTGTGGATATTAGGTATGCAGGACACAAGTTCTGTTGATGAACGAACTTCTTTAATGTTTTCTTTATTTTCTGTTGCTGATTAGCATACTTGAAGTTTTTATATTTCTTCACTATGTTGACCTAGCAAGGTTCTACCTTTTAGTTGCAAATTCACCATTTGTTTTATTTTGAGTATCTTTTGATTAAGAAAAGTTTTAATGCAGTCGATGCAACAAGATAACAGCTGCTGGTGTTTCTGAGCTCGTTCAGCATTGTTGTTCCTTGGAAACACTACGTTGCGGGTAAGTACCTACTCCCCTGCCACTGATACACTTTTGATATATATATTATTGGTTTTCTTACATCTATTTGATATGCTAGTTCCGAGAATTCATAGATAGTTTACTGCCAAGATGTTGCTATCAATTCCACTTATTTTTCAAAGTATCTTCAAGGAAAACTTAACAAAATTCCAGTTTCATATGATATATTGATGTCTTATTCGTCTATAATAATACGTAGAGCTAAGGGTCCAAGGCTTTGTTTACTTAATGATTAGAACACAAGCTTGTTGATTTCCTAATTTTGTGTGTGCTGTCATTCTGGCTCATAACAGGATATGTATATGTATGTAGTTTGTGTTTTGACTAGTAGTAATAACCTCATAACAGGATATGAACAAAAATGTTGCAGAGGGTGTCCGAGAAGTGATTACACGGCACGAAGGTCCTTGGATATTTTTAAACCAAGGCTGGATGATATAGAAGGAGATTCATGGGAGGAGCTTGATACAGCTGAAATTGCCAATGGGGCACAATCCCTTCGGTGGTTGGTCTGGGTAGGGTGTCTTCTATGATCTATCCCCAATTTTGTATTTATTTTCATTATTTTCCTGCTTTCCTTTTTGGATAAAGAAAAATTACATCATTCTCTTAGGAAGTATAAGAAAGTTTGTTGATTAGGGATCATATGGTTAGATAGGTGAGTACTTCTATCATTTTGCCAAGTGCTGTCTGTGATCTATTTGTAAGGGTGAAATGTCTACTTTCCTGAAAATGTGCCTCAAGTGTAGGTTCAATGACGTATCTGGCATTTCGACAGCAAGTGAAATACAAATTCCAGTTCTTTTTTACTTCATGGTGGTCGTAGAAGTGGGATAATCTTGCATCCTTGAAAGAGTCCCACCAATTCTAATCGTTCATGCTTTCTTTTTCACTTCCTGCAGCCAAAAGTAGATAAAGATTCCTTGGAGATTTTCTCCACAGAATGCCCGCGCATTACAATAAACCCAAAGCCATCGCCTTTCGGTTTCAGGGGGAAGCAAGTTCCAGGGGAAGCATTGCCAAACATTGCATTAGATGAACACACCATAGTTGATATTGATCCCAAAACATGGGCAGTGGGCAGATCCACAGCAAGGGCCCCAATTTCTCCATCAAACACCTCAGAGTTGTCTTTAGCTGAGAAATTCAGACTTGCATTTGTGGAAAGGGACACTCGGTTAGCTCCAAAACGAGCTAAAAATGCAAGGCAACATCAAAGGCGTGCGGAGAGGGAGTGGATGACGACGAGTACAAGAGCCAAGGCACTGGCTTTGGCCTCTCAAGCAAGTAAAAGTTTGCAGAGTCGTACTTAGCTATTAGCTACTACTGTTTCTCTTTAAGATTTCATTATCAATAACATACAAGGTTTGACCTCTTCATCGATTCTATACCATTATGAGATCGGGTTTTAAGATTGATAAATGTATTATTACCATAGAAAAAGTAATTTCTAAAGTATCTGGCTCTTTTTCTTGAATAGGCTTGCCTATGCTCTATCATTTGAGAATTGTACATACATGTATGTAGTTGGAGATGGGAAGCAGGATATAAGTAGAGATAAAGACGAGGAGCTATACGTCAATATAAATGGTTCAATCTATCATAATTGGTAGAACTTTATAATATCA

Coding sequence (CDS)

ATGGAAACAATCGAAGAACCCAATATCATTGCGAAAACTTTTCTAAAACTTGATTTGAATCAGAAATCCAGTTCCCACCCTACTTATTCTAATACCTTCGTTAAATCTGCGTCTCTCGATTTGGATCAGAATTCCTGTTTCAAGCCTACTGCATCTCAATTCTCCGGAACAGGATTGGCCTTTGAAAGGAAGAAACCTCCAAATTTAGTCAGTTTGTGCGTTGGGGTTATTGGCAAGCATTTGGAAGATATAATTCCCGACTTAGATGTGATTAGTGCCAACTTTCCGTCAGATGTAAAGCAATCTATAGCAGCAATTGCACGAAGAAGAGAGTTACTGAACGATGATGTTATTATCTCCCTAGTAGATAGTTCGTGGGAAACCCTGGATGTTTCTGGTTCAGAAGTTTCTGATTTTGGGTTAGCAGAAATTGGCAAGACATGCAAATCTCTTAGAGCTGTGGATATTAGTCGATGCAACAAGATAACAGCTGCTGGTGTTTCTGAGCTCGTTCAGCATTGTTGTTCCTTGGAAACACTACGTTGCGGAGGGTGTCCGAGAAGTGATTACACGGCACGAAGGTCCTTGGATATTTTTAAACCAAGGCTGGATGATATAGAAGGAGATTCATGGGAGGAGCTTGATACAGCTGAAATTGCCAATGGGGCACAATCCCTTCGGTGGTTGGTCTGGGTAGGGTGTCTTCTATGA

Protein sequence

METIEEPNIIAKTFLKLDLNQKSSSHPTYSNTFVKSASLDLDQNSCFKPTASQFSGTGLAFERKKPPNLVSLCVGVIGKHLEDIIPDLDVISANFPSDVKQSIAAIARRRELLNDDVIISLVDSSWETLDVSGSEVSDFGLAEIGKTCKSLRAVDISRCNKITAAGVSELVQHCCSLETLRCGGCPRSDYTARRSLDIFKPRLDDIEGDSWEELDTAEIANGAQSLRWLVWVGCLL
Homology
[Close]
BLAST of Cucsat.G20647 vs. NCBI nr
Match: XP_004139789.1 (uncharacterized protein LOC101203553 [Cucumis sativus] >KGN44164.1 hypothetical protein Csa_015808 [Cucumis sativus])

HSP 1 Score: 256 bits (654), Expect = 3.99e-82
Identity = 128/129 (99.22%), Postives = 129/129 (100.00%), Query Frame = 0 

Query: 24  TGTGLAFERKKPPNLVSLCVGVIGKHLEDIIPDLDVISANFPSDVKQSIAAIARRRELLN 83
           +GTGLAFERKKPPNLVSLCVGVIGKHLEDIIPDLDVISANFPSDVKQSIAAIARRRELLN
Sbjct: 55  SGTGLAFERKKPPNLVSLCVGVIGKHLEDIIPDLDVISANFPSDVKQSIAAIARRRELLN 114

Query: 84  DDVIISLVDSSWETLDVSGSEVSDFGLAEIGKTCKSLRAVDISRCNKITAAGVSELVQHC 143
           DDVIISLVDSSWETLDVSGSEVSDFGLAEIGKTCKSLRAVDISRCNKITAAGVSELVQHC
Sbjct: 115 DDVIISLVDSSWETLDVSGSEVSDFGLAEIGKTCKSLRAVDISRCNKITAAGVSELVQHC 174

Query: 144 CSLETLRCG 152
           CSLETLRCG
Sbjct: 175 CSLETLRCG 183

[Close]
BLAST of Cucsat.G20647 vs. NCBI nr
Match: KAA0025152.1 (protein AMN1-like protein [Cucumis melo var. makuwa] >TYK23110.1 protein AMN1-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 246 bits (628), Expect = 3.21e-78
Identity = 123/125 (98.40%), Postives = 124/125 (99.20%), Query Frame = 0 

Query: 28  LAFERKKPPNLVSLCVGVIGKHLEDIIPDLDVISANFPSDVKQSIAAIARRRELLNDDVI 87
           LAFERKKPPNLVSLCVGVIGKHLEDIIPDLD ISANFPSDVKQSIAA+ARRRELLNDDVI
Sbjct: 57  LAFERKKPPNLVSLCVGVIGKHLEDIIPDLDEISANFPSDVKQSIAAVARRRELLNDDVI 116

Query: 88  ISLVDSSWETLDVSGSEVSDFGLAEIGKTCKSLRAVDISRCNKITAAGVSELVQHCCSLE 147
           ISLVDSSWETLDVSGSEVSDFGLAEIGKTCKSLRAVDISRCNKITAAGVSELVQHCCSLE
Sbjct: 117 ISLVDSSWETLDVSGSEVSDFGLAEIGKTCKSLRAVDISRCNKITAAGVSELVQHCCSLE 176

Query: 148 TLRCG 152
           TLRCG
Sbjct: 177 TLRCG 181

[Close]
BLAST of Cucsat.G20647 vs. NCBI nr
Match: XP_008447736.1 (PREDICTED: uncharacterized protein LOC103490139 [Cucumis melo])

HSP 1 Score: 246 bits (628), Expect = 3.21e-78
Identity = 123/125 (98.40%), Postives = 124/125 (99.20%), Query Frame = 0 

Query: 28  LAFERKKPPNLVSLCVGVIGKHLEDIIPDLDVISANFPSDVKQSIAAIARRRELLNDDVI 87
           LAFERKKPPNLVSLCVGVIGKHLEDIIPDLD ISANFPSDVKQSIAA+ARRRELLNDDVI
Sbjct: 57  LAFERKKPPNLVSLCVGVIGKHLEDIIPDLDEISANFPSDVKQSIAAVARRRELLNDDVI 116

Query: 88  ISLVDSSWETLDVSGSEVSDFGLAEIGKTCKSLRAVDISRCNKITAAGVSELVQHCCSLE 147
           ISLVDSSWETLDVSGSEVSDFGLAEIGKTCKSLRAVDISRCNKITAAGVSELVQHCCSLE
Sbjct: 117 ISLVDSSWETLDVSGSEVSDFGLAEIGKTCKSLRAVDISRCNKITAAGVSELVQHCCSLE 176

Query: 148 TLRCG 152
           TLRCG
Sbjct: 177 TLRCG 181

[Close]
BLAST of Cucsat.G20647 vs. NCBI nr
Match: XP_038896648.1 (uncharacterized protein LOC120084911 [Benincasa hispida])

HSP 1 Score: 235 bits (600), Expect = 5.78e-74
Identity = 114/130 (87.69%), Postives = 124/130 (95.38%), Query Frame = 0 

Query: 23  DTGTGLAFERKKPPNLVSLCVGVIGKHLEDIIPDLDVISANFPSDVKQSIAAIARRRELL 82
            +GTGL FERKKPP+LVSLCVGVIGKHLEDIIPDLD ISANFPSDVK+S+AA+ARRR+LL
Sbjct: 54  SSGTGLPFERKKPPSLVSLCVGVIGKHLEDIIPDLDEISANFPSDVKKSLAAVARRRKLL 113

Query: 83  NDDVIISLVDSSWETLDVSGSEVSDFGLAEIGKTCKSLRAVDISRCNKITAAGVSELVQH 142
           +DD+IISL DSSWETL+VSGSEVSDFGLAE+ KTCK LRAVDISRCNKITAAGVSELVQH
Sbjct: 114 DDDIIISLADSSWETLNVSGSEVSDFGLAEVAKTCKFLRAVDISRCNKITAAGVSELVQH 173

Query: 143 CCSLETLRCG 152
           CCSLETLRCG
Sbjct: 174 CCSLETLRCG 183

[Close]
BLAST of Cucsat.G20647 vs. NCBI nr
Match: XP_023525892.1 (uncharacterized protein LOC111789373 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 225 bits (573), Expect = 6.86e-70
Identity = 110/130 (84.62%), Postives = 120/130 (92.31%), Query Frame = 0 

Query: 23  DTGTGLAFERKKPPNLVSLCVGVIGKHLEDIIPDLDVISANFPSDVKQSIAAIARRRELL 82
            +GTGL FERKK P+LVSLCVG+IGKHLEDII DLD ISA+FPSDVKQSI AIARRR+LL
Sbjct: 54  SSGTGLLFERKKTPSLVSLCVGLIGKHLEDIISDLDEISASFPSDVKQSITAIARRRKLL 113

Query: 83  NDDVIISLVDSSWETLDVSGSEVSDFGLAEIGKTCKSLRAVDISRCNKITAAGVSELVQH 142
           +DDV+ISL DSSWETLDVSGS+VSDFGL ++ KTCK LRAVDISRCNKITAAGVSELVQH
Sbjct: 114 DDDVVISLADSSWETLDVSGSDVSDFGLTKVAKTCKFLRAVDISRCNKITAAGVSELVQH 173

Query: 143 CCSLETLRCG 152
           CCSLETLRCG
Sbjct: 174 CCSLETLRCG 183

[Close]
BLAST of Cucsat.G20647 vs. ExPASy TrEMBL
Match: A0A0A0K5D7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G210580 PE=4 SV=1)

HSP 1 Score: 256 bits (654), Expect = 1.93e-82
Identity = 128/129 (99.22%), Postives = 129/129 (100.00%), Query Frame = 0 

Query: 24  TGTGLAFERKKPPNLVSLCVGVIGKHLEDIIPDLDVISANFPSDVKQSIAAIARRRELLN 83
           +GTGLAFERKKPPNLVSLCVGVIGKHLEDIIPDLDVISANFPSDVKQSIAAIARRRELLN
Sbjct: 55  SGTGLAFERKKPPNLVSLCVGVIGKHLEDIIPDLDVISANFPSDVKQSIAAIARRRELLN 114

Query: 84  DDVIISLVDSSWETLDVSGSEVSDFGLAEIGKTCKSLRAVDISRCNKITAAGVSELVQHC 143
           DDVIISLVDSSWETLDVSGSEVSDFGLAEIGKTCKSLRAVDISRCNKITAAGVSELVQHC
Sbjct: 115 DDVIISLVDSSWETLDVSGSEVSDFGLAEIGKTCKSLRAVDISRCNKITAAGVSELVQHC 174

Query: 144 CSLETLRCG 152
           CSLETLRCG
Sbjct: 175 CSLETLRCG 183

[Close]
BLAST of Cucsat.G20647 vs. ExPASy TrEMBL
Match: A0A5D3DI95 (Protein AMN1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G001000 PE=4 SV=1)

HSP 1 Score: 246 bits (628), Expect = 1.56e-78
Identity = 123/125 (98.40%), Postives = 124/125 (99.20%), Query Frame = 0 

Query: 28  LAFERKKPPNLVSLCVGVIGKHLEDIIPDLDVISANFPSDVKQSIAAIARRRELLNDDVI 87
           LAFERKKPPNLVSLCVGVIGKHLEDIIPDLD ISANFPSDVKQSIAA+ARRRELLNDDVI
Sbjct: 57  LAFERKKPPNLVSLCVGVIGKHLEDIIPDLDEISANFPSDVKQSIAAVARRRELLNDDVI 116

Query: 88  ISLVDSSWETLDVSGSEVSDFGLAEIGKTCKSLRAVDISRCNKITAAGVSELVQHCCSLE 147
           ISLVDSSWETLDVSGSEVSDFGLAEIGKTCKSLRAVDISRCNKITAAGVSELVQHCCSLE
Sbjct: 117 ISLVDSSWETLDVSGSEVSDFGLAEIGKTCKSLRAVDISRCNKITAAGVSELVQHCCSLE 176

Query: 148 TLRCG 152
           TLRCG
Sbjct: 177 TLRCG 181

[Close]
BLAST of Cucsat.G20647 vs. ExPASy TrEMBL
Match: A0A1S3BJ08 (uncharacterized protein LOC103490139 OS=Cucumis melo OX=3656 GN=LOC103490139 PE=4 SV=1)

HSP 1 Score: 246 bits (628), Expect = 1.56e-78
Identity = 123/125 (98.40%), Postives = 124/125 (99.20%), Query Frame = 0 

Query: 28  LAFERKKPPNLVSLCVGVIGKHLEDIIPDLDVISANFPSDVKQSIAAIARRRELLNDDVI 87
           LAFERKKPPNLVSLCVGVIGKHLEDIIPDLD ISANFPSDVKQSIAA+ARRRELLNDDVI
Sbjct: 57  LAFERKKPPNLVSLCVGVIGKHLEDIIPDLDEISANFPSDVKQSIAAVARRRELLNDDVI 116

Query: 88  ISLVDSSWETLDVSGSEVSDFGLAEIGKTCKSLRAVDISRCNKITAAGVSELVQHCCSLE 147
           ISLVDSSWETLDVSGSEVSDFGLAEIGKTCKSLRAVDISRCNKITAAGVSELVQHCCSLE
Sbjct: 117 ISLVDSSWETLDVSGSEVSDFGLAEIGKTCKSLRAVDISRCNKITAAGVSELVQHCCSLE 176

Query: 148 TLRCG 152
           TLRCG
Sbjct: 177 TLRCG 181

[Close]
BLAST of Cucsat.G20647 vs. ExPASy TrEMBL
Match: A0A6J1FL68 (uncharacterized protein LOC111446756 OS=Cucurbita moschata OX=3662 GN=LOC111446756 PE=4 SV=1)

HSP 1 Score: 223 bits (568), Expect = 1.89e-69
Identity = 108/130 (83.08%), Postives = 120/130 (92.31%), Query Frame = 0 

Query: 23  DTGTGLAFERKKPPNLVSLCVGVIGKHLEDIIPDLDVISANFPSDVKQSIAAIARRRELL 82
            +GTGL FERKK P+LVSLCVG+IGKHLEDII DLD ISA+FPSDVKQSI AIARRR+LL
Sbjct: 54  SSGTGLPFERKKTPSLVSLCVGLIGKHLEDIISDLDEISASFPSDVKQSITAIARRRKLL 113

Query: 83  NDDVIISLVDSSWETLDVSGSEVSDFGLAEIGKTCKSLRAVDISRCNKITAAGVSELVQH 142
           +DDV+ISL DSSWETLDVSGS+VSDFGL ++ +TCK LRAVDISRCNKITAAG+SELVQH
Sbjct: 114 DDDVVISLADSSWETLDVSGSDVSDFGLTKVAQTCKLLRAVDISRCNKITAAGISELVQH 173

Query: 143 CCSLETLRCG 152
           CCSLETLRCG
Sbjct: 174 CCSLETLRCG 183

[Close]
BLAST of Cucsat.G20647 vs. ExPASy TrEMBL
Match: A0A6J1IWS7 (uncharacterized protein LOC111480610 OS=Cucurbita maxima OX=3661 GN=LOC111480610 PE=4 SV=1)

HSP 1 Score: 220 bits (561), Expect = 2.14e-68
Identity = 107/130 (82.31%), Postives = 119/130 (91.54%), Query Frame = 0 

Query: 23  DTGTGLAFERKKPPNLVSLCVGVIGKHLEDIIPDLDVISANFPSDVKQSIAAIARRRELL 82
            +GTG  FERKK P+LVSLCVG++GKHLEDII DLD ISA+FPSDVKQSI AIARRR+LL
Sbjct: 54  SSGTGFPFERKKTPSLVSLCVGLVGKHLEDIISDLDEISASFPSDVKQSITAIARRRKLL 113

Query: 83  NDDVIISLVDSSWETLDVSGSEVSDFGLAEIGKTCKSLRAVDISRCNKITAAGVSELVQH 142
           +DDV+ISL DSSWETLDVSGS+VSDFGL ++ +TCK LRAVDISRCNKITAAGVSELVQH
Sbjct: 114 DDDVVISLADSSWETLDVSGSDVSDFGLTKVVQTCKFLRAVDISRCNKITAAGVSELVQH 173

Query: 143 CCSLETLRCG 152
           CCSLETLRCG
Sbjct: 174 CCSLETLRCG 183

The following BLAST results are available for this feature:
BLAST of Cucsat.G20647 vs.
Match NameE-valueIdentityDescription
BLAST of Cucsat.G20647 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004139789.13.99e-8299.22uncharacterized protein LOC101203553 [Cucumis sativus] >KGN44164.1 hypothetical ... [more]
KAA0025152.13.21e-7898.40protein AMN1-like protein [Cucumis melo var. makuwa] >TYK23110.1 protein AMN1-li... [more]
XP_008447736.13.21e-7898.40PREDICTED: uncharacterized protein LOC103490139 [Cucumis melo][more]
XP_038896648.15.78e-7487.69uncharacterized protein LOC120084911 [Benincasa hispida][more]
XP_023525892.16.86e-7084.62uncharacterized protein LOC111789373 [Cucurbita pepo subsp. pepo][more]
BLAST of Cucsat.G20647 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K5D71.93e-8299.22Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G210580 PE=4 SV=1[more]
A0A5D3DI951.56e-7898.40Protein AMN1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo... [more]
A0A1S3BJ081.56e-7898.40uncharacterized protein LOC103490139 OS=Cucumis melo OX=3656 GN=LOC103490139 PE=... [more]
A0A6J1FL681.89e-6983.08uncharacterized protein LOC111446756 OS=Cucurbita moschata OX=3662 GN=LOC1114467... [more]
A0A6J1IWS72.14e-6882.31uncharacterized protein LOC111480610 OS=Cucurbita maxima OX=3661 GN=LOC111480610... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006553Leucine-rich repeat, cysteine-containing subtypeSMARTSM00367LRR_CC_2coord: 148..173
e-value: 0.0061
score: 25.8
coord: 123..147
e-value: 660.0
score: 0.3
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 30..224
e-value: 3.5E-15
score: 57.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 327..349
NoneNo IPR availablePANTHERPTHR13318UNCHARACTERIZEDcoord: 36..366
NoneNo IPR availablePANTHERPTHR13318:SF119OS06G0679700 PROTEINcoord: 36..366
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 15..189

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G20647.T3Cucsat.G20647.T3mRNA
Cucsat.G20647.T12Cucsat.G20647.T12mRNA
Cucsat.G20647.T11Cucsat.G20647.T11mRNA
Cucsat.G20647.T2Cucsat.G20647.T2mRNA
Cucsat.G20647.T1Cucsat.G20647.T1mRNA
Cucsat.G20647.T7Cucsat.G20647.T7mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0031146 SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
cellular_component GO:0019005 SCF ubiquitin ligase complex