Cucsat.G20249.T9 (mRNA) Cucumber (B10) v3

Overview
NameCucsat.G20249.T9
TypemRNA
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptiontRNA (Adenine(37)-N6)-methyltransferase
Locationctg47: 286202 .. 290010 (-)
RNA-Seq ExpressionCucsat.G20249.T9
SyntenyCucsat.G20249.T9
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TGGGGTATTTGGGTAATTGTCCAAAATAAAACCCCAAAACCGGAAATTGGTTAAACCTCAAGCAGCCGGATCGAGTTCGTCTGAACGCTGCAGACTAATGACCTACGCTGCGGATTCAAGATGGTCGACGGCCGCCATGAGCGTCACGCTGGCGTTTATCTCTGCCTCCGCCATCATATCTCGTAAAACTTCGAAACTTTTTTTTAGATCATATATGTCCTCTTTCTTAGTTTCTCCGATTTCCGATTTGTTTCTTACAATTAAAGTTTTGTTGTTTTCCCCAGTTTATCTTGTGACAAAGAAGTCCAGAGAGTTGGGTACCAAGGTTCGACAGCTCGAGGCTTCTCTAGCAGCTTCATTAAAAAAAACCGCCGCCGAGAGACAAGGCCGAATACGGGCACAGCAGGTACTTCATATCATTTGCTCTTCTGCATCGCTTCATGTTCCAGTGTTGTTATTTGATATCTTGGTTTCAATTTTCTCCCTACTTTAGGCTTTAAGGAAAGCAGTTGCGGAACCCAAGTCTGATAGTGTGAAATGTACTTCATATCCCATGACGCCAATCGGTACTATCCAATCATCCTTCACTACCAGGTTAGTTTTTTTATTGCATTATCTGGTAGTTGAAACATGAATTTTTGGGTCGTTGTTTTCTCATTTTTCTGTTCATAAAGCTAATGTCAAAAGTGGATATGTGTGAGCCATATTCTTCAGTTAGCTGTAAAAATCGAACAATCAATAACCTTTTTTGGGGGTTTTCTTTTTAGGAATGGGACTCCAAGGCAATCTTTGCTCGTACCTCTTGCAAGGGCACGGCTGGTGTTTTCTGCTCGCATTCCCCCAGCTTCCATTGAAGGTCTTGGAGAATATTCCCATTGCTGGGTCATATATGTCTTTCATTTGAACACAGATCTTGACAAGTTGTGGAAGGATCCATCGAAATCAAAATTCAAGGCCAAAGTACGTTTTCTTCATTAGTTGATGCTCCTTCAATGTGGAACTCATATTTTTATTATTCTTATAATTTCCTAAAATCCCATAAAAGGACAGCTCAATGGTAGGTTAGAGTACCGAGGTTGAAAGGCGAAAGAGTAGGAGTCTTTGCTACGAGATCTCCACATAGACCATGCCCAATCGGACTTACTGTTGCAAAGGTAAGATAATTTTTTTTAGTGCTGTCGATGTGTCTTGCAAGTTTATGGAGAAGCCCATGGTAGATCACAGACGTGGATGAAATGTGTCTTCCCCTAACGAGTTCTAGATGGGTTTTGCTGTCACATGAACATGGTCCAACATGTTTTGTATGGTTAGGCTGAAATGTCATTTAATTTAGTATTAGAAATTCATGGTTACAAGCTTGCAGTTGTTGTAACTTGCAAGTGTTAGACAGCATTCAGATGCAACAAATAAATGGGGGAATATTAAATCTAAGATTAATAGATCTGCTATGTTACCAATTCAGGTGGAGGCTGTCCAGGGACATGAAATTCTACTCTCTGGTGCCGACCTTGTTGATGGAACTGTAAGAGTTCGTTTTCAATTTTTCTTACCACGAAAAAGGTCTAGTTGAATTTATACGTTACTTCTTGGGGTAATGATTGTTATGATTTCTTGCTTTTTTTGAATTTTGTTACAGCCAGTACTTGATGTTAAACCTTATCTACCATACTGTGACAGTGTCCAAAATGCAACAGTCCCAAAGTGGTTACTGGTATGTCTTCAAGAATTAATTTCTATGACTAAACGTTATTTTAGAATTTCCTCGATGCTTATGTTATTGCTATTCATCGTTTAAATTGTTTTTTATGTTTTAGTTTTTGGCAACTATTCTTTCAGTCTGTCCCAACGAAGATTTATTCTGAATGTTGTGCTTTTCAAACTTCTCTTATGCATGGCATATGTGATATGACTAGTTGTGTGCAAATAACTTAAGAAATTCAGCTTTCCATATACTATTAGGTTTTTGTCCTACTCTCATATTTGGAGTTATACGCTGTGACCATGTAATATGTTTATGTACATTCCTCTTGGCATTCTTACATGTTATTTACGCCAACACAGGGGGACAATGTATTGACTGTTGCGTCCATTTGCTTCTCTGAAGAATTTACGTCCACTCTATCCAAGTGTTGGCCACTAACGGTGAGTTCCTTTGTCTTTTTCTTTATAATTAATTGATCATTGTTGTTTCATAATCATCATTATTATTGTTACTACTACATAGATATTCATTAGTGTTCGGGCCAACTTGGAATATTCGACAATATGCCAGAAATATTCTCTGATTGTTTTGCACAGGACATGGTAAAATCAATACACAACAATATTTTACTTAGCGTGCATAAGTTTTCCTTAAAATTTTGGGTATTGGAAAGGTGTAATGTAAAATCAAGAATCTAGTTTCTTTGGTTTCAAAAGGCACTTTTCAAATTGCTATATTTTATACCTGAAGGGGAGGGGAGGGGAGGGACGGGACGTCCTTGCTGGAGTTTTGGGTCATAATCAGCCTTAGGTTGGTCCTCTGATAGAAAACTTAATAAAAGTGAAAGCCTTTGTTGTCTTCTGGTGATATTGTAGCACAAGGAGTCTAAATGCCTAAAGATAATTACGCCTCTGGAATTTTACATTATGAACGTTGGGAGAGCGGCTGCTTTGTAGTCTGATTACCATTTTTGTGAAACTCCACGTTACAAAGAGCTAATGCTCTCAACTTTCATATGGTACAAAGTAGGATATTCTGGATGGGGTATGCCATTTAGGGGTGTTTAGTGGTTCGTAATGGGATGTGTTTGTAATGTAATGTAATCCAAAATCCATATTTGGATAGAGTGTTTTGGACTCAACTTATAATACAAACTTCATTCTGCTTAATAGTTTTCAATCCAACGTTCTCTCTCCCTGGTCTCATTTCTAACACTCATTTTTTATTTTTTATTTTCAGTAATGTAATCAGTCCAACTGTCTAAATAACTCTTTAATTTTTTCTTTGGTTTCCATCATTTTGCCACATAAATTTCTCACGCATCATATTTTGTTGGTTTCAGGAAAAGAAATCACTTTATGCGTCGGAAGATGAATTGAAAAACTTTGTGAAACAGGTGCTTTCTTGGGATATTCGATCAGTGTCTCAACGAAGTCGACCTCATTGCTCTCACATTAAGACGGATTCAGATGATAGTTCAGATTCAGATGGTCACCTAAATGACAAAGTTTCGAGTAGTTCACAAAGTTCTTCAAAGAGCACAATCTATCACCTACTTGTAGATGGCTTAGATGTTTCATACACAATTGGTTGCCATGGGGACGTGGTTGTGGACAAAGTGGAACTTGCATCATCTAGCTCGAGAACAAGAAGCAATTAACACAAAGCAAATTCTTCCGAATAGGCAAATCAGGGTTGTCTTATTACTAACCTTGCATTGCTACAATTAAAAGGATCCCCTATCTTGGAAATTTTCCCTTGAAATTATACTGCCTTGAATGGAGCTTGATCTTGCTCATCTTTCTGTCAGAAACGAACTGTAGGTTGAAACTGAGACTAGAATGCTGGATAAATTATGAGTTAAATGGTTTTGGTTGAAAAGCAGCTGTTTGCTTACGAGTGATTCTTTGACTTTTATACCACAATCTTAAAACAAGAAAAGGATATGTTTGTGACCTCTGTACTCCAGGAGTAGCACAAGTGACTAGGTCACTATAGGCTGAACTGATTCACGTTTGGTTTGGATTTTGCTGTTTTTCATTTTTAGTTTAGAAAATTCTTTGCTTAGGTTTCTTTCTCTCTCTCAATTGAAAAAACAACTTTTCAA

Coding sequence (CDS)

ATGACCTACGCTGCGGATTCAAGATGGTCGACGGCCGCCATGAGCGTCACGCTGGCGTTTATCTCTGCCTCCGCCATCATATCTCTTTATCTTGTGACAAAGAAGTCCAGAGAGTTGGGTACCAAGGTTCGACAGCTCGAGGCTTCTCTAGCAGCTTCATTAAAAAAAACCGCCGCCGAGAGACAAGGCCGAATACGGGCACAGCAGGCTTTAAGGAAAGCAGTTGCGGAACCCAAGTCTGATAGTGTGAAATGTACTTCATATCCCATGACGCCAATCGGTACTATCCAATCATCCTTCACTACCAGGAATGGGACTCCAAGGCAATCTTTGCTCGTACCTCTTGCAAGGGCACGGCTGGTGTTTTCTGCTCGCATTCCCCCAGCTTCCATTGAAGGTCTTGGAGAATATTCCCATTGCTGGGTCATATATGTCTTTCATTTGAACACAGATCTTGACAAGTTGTGGAAGGATCCATCGAAATCAAAATTCAAGGCCAAAGTACGTTTTCTTCATTAG

Protein sequence

MTYAADSRWSTAAMSVTLAFISASAIISLYLVTKKSRELGTKVRQLEASLAASLKKTAAERQGRIRAQQALRKAVAEPKSDSVKCTSYPMTPIGTIQSSFTTRNGTPRQSLLVPLARARLVFSARIPPASIEGLGEYSHCWVIYVFHLNTDLDKLWKDPSKSKFKAKVRFLH
Homology
[Close]
BLAST of Cucsat.G20249.T9 vs. ExPASy Swiss-Prot
Match: Q9BU70 (tRNA (adenine(37)-N6)-methyltransferase OS=Homo sapiens OX=9606 GN=TRMO PE=1 SV=2)

HSP 1 Score: 57.4 bits (137), Expect = 1.9e-07
Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 0 

Query: 92  PIGTIQSSFTTRNGTPRQSLLVPLARARLVFSARI---PPASIEGLGEYSHCWVIYVFHL 151
           P+G ++S F+ +NGTPRQ  +   +RA L    RI   P  S+ GL ++SH W+++VFH 
Sbjct: 32  PVGYLESCFSAKNGTPRQPSICSYSRACLRIRKRIFNNPEHSLMGLEQFSHVWILFVFHK 91

Query: 152 NTDL 153
           N  L
Sbjct: 92  NGHL 95

[Close]
BLAST of Cucsat.G20249.T9 vs. ExPASy Swiss-Prot
Match: Q562D6 (tRNA (adenine(37)-N6)-methyltransferase OS=Mus musculus OX=10090 GN=Trmo PE=2 SV=2)

HSP 1 Score: 53.5 bits (127), Expect = 2.7e-06
Identity = 31/81 (38.27%), Postives = 44/81 (54.32%), Query Frame = 0 

Query: 92  PIGTIQSSFTTRNGTPRQSLLVPLARARLVFSARI---PPASIEGLGEYSHCWVIYVFHL 151
           PIG ++S F  + GTPRQ  +   +RA L     I   P  S+ GL E+SH W+++VFH 
Sbjct: 32  PIGYLESCFPAKIGTPRQPSICSHSRACLKIRKNIFNNPEHSLMGLEEFSHVWILFVFHK 91

Query: 152 NTDLDKLWKDPSKSKFKAKVR 170
           N  L+          +KAKV+
Sbjct: 92  NGHLN----------YKAKVQ 102

[Close]
BLAST of Cucsat.G20249.T9 vs. ExPASy Swiss-Prot
Match: Q4V7E0 (tRNA (adenine(37)-N6)-methyltransferase OS=Rattus norvegicus OX=10116 GN=Trmo PE=2 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 3.5e-06
Identity = 30/81 (37.04%), Postives = 45/81 (55.56%), Query Frame = 0 

Query: 92  PIGTIQSSFTTRNGTPRQSLLVPLARARLVFSARI---PPASIEGLGEYSHCWVIYVFHL 151
           PIG ++S F+ + GTPRQ  +   +RA L     I   P  S+ GL ++SH W+++VFH 
Sbjct: 32  PIGYLESCFSAKIGTPRQPSICSQSRACLKIRKSIFNNPEHSLMGLEQFSHVWILFVFHK 91

Query: 152 NTDLDKLWKDPSKSKFKAKVR 170
           N  L+          +KAKV+
Sbjct: 92  NGHLN----------YKAKVQ 102

[Close]
BLAST of Cucsat.G20249.T9 vs. NCBI nr
Match: XP_004149885.1 (uncharacterized protein LOC101219357 [Cucumis sativus] >KGN65285.1 hypothetical protein Csa_019626 [Cucumis sativus])

HSP 1 Score: 320 bits (819), Expect = 1.10e-106
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0 

Query: 1   MTYAADSRWSTAAMSVTLAFISASAIISLYLVTKKSRELGTKVRQLEASLAASLKKTAAE 60
           MTYAADSRWSTAAMSVTLAFISASAIISLYLVTKKSRELGTKVRQLEASLAASLKKTAAE
Sbjct: 1   MTYAADSRWSTAAMSVTLAFISASAIISLYLVTKKSRELGTKVRQLEASLAASLKKTAAE 60

Query: 61  RQGRIRAQQALRKAVAEPKSDSVKCTSYPMTPIGTIQSSFTTRNGTPRQSLLVPLARARL 120
           RQGRIRAQQALRKAVAEPKSDSVKCTSYPMTPIGTIQSSFTTRNGTPRQSLLVPLARARL
Sbjct: 61  RQGRIRAQQALRKAVAEPKSDSVKCTSYPMTPIGTIQSSFTTRNGTPRQSLLVPLARARL 120

Query: 121 VFSARIPPASIEGLGEYSHCWVIYVFHLNTDLDKLWKDPSKSKFKAKVR 169
           VFSARIPPASIEGLGEYSHCWVIYVFHLNTDLDKLWKDPSKSKFKAKVR
Sbjct: 121 VFSARIPPASIEGLGEYSHCWVIYVFHLNTDLDKLWKDPSKSKFKAKVR 169

[Close]
BLAST of Cucsat.G20249.T9 vs. NCBI nr
Match: XP_038879627.1 (tRNA (adenine(37)-N6)-methyltransferase isoform X2 [Benincasa hispida])

HSP 1 Score: 304 bits (779), Expect = 4.73e-102
Identity = 158/169 (93.49%), Postives = 167/169 (98.82%), Query Frame = 0 

Query: 1   MTYAADSRWSTAAMSVTLAFISASAIISLYLVTKKSRELGTKVRQLEASLAASLKKTAAE 60
           M YAA+SRWS AA+SVTLAFISASA+ISLY+VTKKSRELGTKVR+LEASLA+SLKKTAAE
Sbjct: 1   MAYAAESRWSMAALSVTLAFISASAVISLYVVTKKSRELGTKVRELEASLASSLKKTAAE 60

Query: 61  RQGRIRAQQALRKAVAEPKSDSVKCTSYPMTPIGTIQSSFTTRNGTPRQSLLVPLARARL 120
           RQGRIRAQQALRKAVAEPKSDSV+CTSYPMTPIGTI+SSF+TRNGTPRQSLLVPLARARL
Sbjct: 61  RQGRIRAQQALRKAVAEPKSDSVECTSYPMTPIGTIRSSFSTRNGTPRQSLLVPLARARL 120

Query: 121 VFSARIPPASIEGLGEYSHCWVIYVFHLNTDLDKLWKDPSKSKFKAKVR 169
           VFSARIPPASIEGLGEYSHCWVIYVFHLNTDLDKLWKDPSKSKFKAKVR
Sbjct: 121 VFSARIPPASIEGLGEYSHCWVIYVFHLNTDLDKLWKDPSKSKFKAKVR 169

[Close]
BLAST of Cucsat.G20249.T9 vs. NCBI nr
Match: XP_038879626.1 (tRNA (adenine(37)-N6)-methyltransferase isoform X1 [Benincasa hispida])

HSP 1 Score: 304 bits (779), Expect = 1.51e-100
Identity = 158/169 (93.49%), Postives = 167/169 (98.82%), Query Frame = 0 

Query: 1   MTYAADSRWSTAAMSVTLAFISASAIISLYLVTKKSRELGTKVRQLEASLAASLKKTAAE 60
           M YAA+SRWS AA+SVTLAFISASA+ISLY+VTKKSRELGTKVR+LEASLA+SLKKTAAE
Sbjct: 1   MAYAAESRWSMAALSVTLAFISASAVISLYVVTKKSRELGTKVRELEASLASSLKKTAAE 60

Query: 61  RQGRIRAQQALRKAVAEPKSDSVKCTSYPMTPIGTIQSSFTTRNGTPRQSLLVPLARARL 120
           RQGRIRAQQALRKAVAEPKSDSV+CTSYPMTPIGTI+SSF+TRNGTPRQSLLVPLARARL
Sbjct: 61  RQGRIRAQQALRKAVAEPKSDSVECTSYPMTPIGTIRSSFSTRNGTPRQSLLVPLARARL 120

Query: 121 VFSARIPPASIEGLGEYSHCWVIYVFHLNTDLDKLWKDPSKSKFKAKVR 169
           VFSARIPPASIEGLGEYSHCWVIYVFHLNTDLDKLWKDPSKSKFKAKVR
Sbjct: 121 VFSARIPPASIEGLGEYSHCWVIYVFHLNTDLDKLWKDPSKSKFKAKVR 169

[Close]
BLAST of Cucsat.G20249.T9 vs. NCBI nr
Match: XP_008453657.1 (PREDICTED: tRNA (adenine(37)-N6)-methyltransferase isoform X1 [Cucumis melo])

HSP 1 Score: 303 bits (776), Expect = 4.30e-100
Identity = 161/169 (95.27%), Postives = 164/169 (97.04%), Query Frame = 0 

Query: 1   MTYAADSRWSTAAMSVTLAFISASAIISLYLVTKKSRELGTKVRQLEASLAASLKKTAAE 60
           M YAA+S WSTAAMSV L FISASAIISLYLVTKKSRELGTKV+QLEASLAASLKKTAAE
Sbjct: 1   MAYAAESIWSTAAMSVALTFISASAIISLYLVTKKSRELGTKVQQLEASLAASLKKTAAE 60

Query: 61  RQGRIRAQQALRKAVAEPKSDSVKCTSYPMTPIGTIQSSFTTRNGTPRQSLLVPLARARL 120
           RQGRIRAQQALRKAVAEPKSDSV+CTSYPMTPIGTIQSSFTTRNGTPRQSLLVPLARARL
Sbjct: 61  RQGRIRAQQALRKAVAEPKSDSVECTSYPMTPIGTIQSSFTTRNGTPRQSLLVPLARARL 120

Query: 121 VFSARIPPASIEGLGEYSHCWVIYVFHLNTDLDKLWKDPSKSKFKAKVR 169
           VFSARIPPASIEGL EYSHCWVIYVFHLNTDLDKLWKDPSKSKFKAKVR
Sbjct: 121 VFSARIPPASIEGLVEYSHCWVIYVFHLNTDLDKLWKDPSKSKFKAKVR 169

[Close]
BLAST of Cucsat.G20249.T9 vs. NCBI nr
Match: TYK09463.1 (tRNA (adenine(37)-N6)-methyltransferase isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 303 bits (776), Expect = 4.30e-100
Identity = 161/169 (95.27%), Postives = 164/169 (97.04%), Query Frame = 0 

Query: 1   MTYAADSRWSTAAMSVTLAFISASAIISLYLVTKKSRELGTKVRQLEASLAASLKKTAAE 60
           M YAA+S WSTAAMSV L FISASAIISLYLVTKKSRELGTKV+QLEASLAASLKKTAAE
Sbjct: 1   MAYAAESIWSTAAMSVALTFISASAIISLYLVTKKSRELGTKVQQLEASLAASLKKTAAE 60

Query: 61  RQGRIRAQQALRKAVAEPKSDSVKCTSYPMTPIGTIQSSFTTRNGTPRQSLLVPLARARL 120
           RQGRIRAQQALRKAVAEPKSDSV+CTSYPMTPIGTIQSSFTTRNGTPRQSLLVPLARARL
Sbjct: 61  RQGRIRAQQALRKAVAEPKSDSVECTSYPMTPIGTIQSSFTTRNGTPRQSLLVPLARARL 120

Query: 121 VFSARIPPASIEGLGEYSHCWVIYVFHLNTDLDKLWKDPSKSKFKAKVR 169
           VFSARIPPASIEGL EYSHCWVIYVFHLNTDLDKLWKDPSKSKFKAKVR
Sbjct: 121 VFSARIPPASIEGLVEYSHCWVIYVFHLNTDLDKLWKDPSKSKFKAKVR 169

[Close]
BLAST of Cucsat.G20249.T9 vs. ExPASy TrEMBL
Match: A0A0A0LTM6 (TsaA-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G295140 PE=4 SV=1)

HSP 1 Score: 320 bits (819), Expect = 5.35e-107
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0 

Query: 1   MTYAADSRWSTAAMSVTLAFISASAIISLYLVTKKSRELGTKVRQLEASLAASLKKTAAE 60
           MTYAADSRWSTAAMSVTLAFISASAIISLYLVTKKSRELGTKVRQLEASLAASLKKTAAE
Sbjct: 1   MTYAADSRWSTAAMSVTLAFISASAIISLYLVTKKSRELGTKVRQLEASLAASLKKTAAE 60

Query: 61  RQGRIRAQQALRKAVAEPKSDSVKCTSYPMTPIGTIQSSFTTRNGTPRQSLLVPLARARL 120
           RQGRIRAQQALRKAVAEPKSDSVKCTSYPMTPIGTIQSSFTTRNGTPRQSLLVPLARARL
Sbjct: 61  RQGRIRAQQALRKAVAEPKSDSVKCTSYPMTPIGTIQSSFTTRNGTPRQSLLVPLARARL 120

Query: 121 VFSARIPPASIEGLGEYSHCWVIYVFHLNTDLDKLWKDPSKSKFKAKVR 169
           VFSARIPPASIEGLGEYSHCWVIYVFHLNTDLDKLWKDPSKSKFKAKVR
Sbjct: 121 VFSARIPPASIEGLGEYSHCWVIYVFHLNTDLDKLWKDPSKSKFKAKVR 169

[Close]
BLAST of Cucsat.G20249.T9 vs. ExPASy TrEMBL
Match: A0A5D3CC84 (tRNA (Adenine(37)-N6)-methyltransferase isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold499G00580 PE=4 SV=1)

HSP 1 Score: 303 bits (776), Expect = 2.08e-100
Identity = 161/169 (95.27%), Postives = 164/169 (97.04%), Query Frame = 0 

Query: 1   MTYAADSRWSTAAMSVTLAFISASAIISLYLVTKKSRELGTKVRQLEASLAASLKKTAAE 60
           M YAA+S WSTAAMSV L FISASAIISLYLVTKKSRELGTKV+QLEASLAASLKKTAAE
Sbjct: 1   MAYAAESIWSTAAMSVALTFISASAIISLYLVTKKSRELGTKVQQLEASLAASLKKTAAE 60

Query: 61  RQGRIRAQQALRKAVAEPKSDSVKCTSYPMTPIGTIQSSFTTRNGTPRQSLLVPLARARL 120
           RQGRIRAQQALRKAVAEPKSDSV+CTSYPMTPIGTIQSSFTTRNGTPRQSLLVPLARARL
Sbjct: 61  RQGRIRAQQALRKAVAEPKSDSVECTSYPMTPIGTIQSSFTTRNGTPRQSLLVPLARARL 120

Query: 121 VFSARIPPASIEGLGEYSHCWVIYVFHLNTDLDKLWKDPSKSKFKAKVR 169
           VFSARIPPASIEGL EYSHCWVIYVFHLNTDLDKLWKDPSKSKFKAKVR
Sbjct: 121 VFSARIPPASIEGLVEYSHCWVIYVFHLNTDLDKLWKDPSKSKFKAKVR 169

[Close]
BLAST of Cucsat.G20249.T9 vs. ExPASy TrEMBL
Match: A0A1S3BW92 (tRNA (Adenine(37)-N6)-methyltransferase isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494312 PE=4 SV=1)

HSP 1 Score: 303 bits (776), Expect = 2.08e-100
Identity = 161/169 (95.27%), Postives = 164/169 (97.04%), Query Frame = 0 

Query: 1   MTYAADSRWSTAAMSVTLAFISASAIISLYLVTKKSRELGTKVRQLEASLAASLKKTAAE 60
           M YAA+S WSTAAMSV L FISASAIISLYLVTKKSRELGTKV+QLEASLAASLKKTAAE
Sbjct: 1   MAYAAESIWSTAAMSVALTFISASAIISLYLVTKKSRELGTKVQQLEASLAASLKKTAAE 60

Query: 61  RQGRIRAQQALRKAVAEPKSDSVKCTSYPMTPIGTIQSSFTTRNGTPRQSLLVPLARARL 120
           RQGRIRAQQALRKAVAEPKSDSV+CTSYPMTPIGTIQSSFTTRNGTPRQSLLVPLARARL
Sbjct: 61  RQGRIRAQQALRKAVAEPKSDSVECTSYPMTPIGTIQSSFTTRNGTPRQSLLVPLARARL 120

Query: 121 VFSARIPPASIEGLGEYSHCWVIYVFHLNTDLDKLWKDPSKSKFKAKVR 169
           VFSARIPPASIEGL EYSHCWVIYVFHLNTDLDKLWKDPSKSKFKAKVR
Sbjct: 121 VFSARIPPASIEGLVEYSHCWVIYVFHLNTDLDKLWKDPSKSKFKAKVR 169

[Close]
BLAST of Cucsat.G20249.T9 vs. ExPASy TrEMBL
Match: A0A1S3BWW3 (uncharacterized protein LOC103494312 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103494312 PE=4 SV=1)

HSP 1 Score: 301 bits (771), Expect = 4.45e-100
Identity = 160/168 (95.24%), Postives = 163/168 (97.02%), Query Frame = 0 

Query: 1   MTYAADSRWSTAAMSVTLAFISASAIISLYLVTKKSRELGTKVRQLEASLAASLKKTAAE 60
           M YAA+S WSTAAMSV L FISASAIISLYLVTKKSRELGTKV+QLEASLAASLKKTAAE
Sbjct: 1   MAYAAESIWSTAAMSVALTFISASAIISLYLVTKKSRELGTKVQQLEASLAASLKKTAAE 60

Query: 61  RQGRIRAQQALRKAVAEPKSDSVKCTSYPMTPIGTIQSSFTTRNGTPRQSLLVPLARARL 120
           RQGRIRAQQALRKAVAEPKSDSV+CTSYPMTPIGTIQSSFTTRNGTPRQSLLVPLARARL
Sbjct: 61  RQGRIRAQQALRKAVAEPKSDSVECTSYPMTPIGTIQSSFTTRNGTPRQSLLVPLARARL 120

Query: 121 VFSARIPPASIEGLGEYSHCWVIYVFHLNTDLDKLWKDPSKSKFKAKV 168
           VFSARIPPASIEGL EYSHCWVIYVFHLNTDLDKLWKDPSKSKFKAKV
Sbjct: 121 VFSARIPPASIEGLVEYSHCWVIYVFHLNTDLDKLWKDPSKSKFKAKV 168

[Close]
BLAST of Cucsat.G20249.T9 vs. ExPASy TrEMBL
Match: A0A6J1BYL5 (uncharacterized protein LOC111006924 OS=Momordica charantia OX=3673 GN=LOC111006924 PE=4 SV=1)

HSP 1 Score: 292 bits (747), Expect = 5.16e-96
Identity = 148/169 (87.57%), Postives = 164/169 (97.04%), Query Frame = 0 

Query: 1   MTYAADSRWSTAAMSVTLAFISASAIISLYLVTKKSRELGTKVRQLEASLAASLKKTAAE 60
           M Y A+SRWSTAAMS+ LAFISASAI+SLYLVT+KSRELG+KVR+LEASLAASLKKT AE
Sbjct: 1   MAYGAESRWSTAAMSIILAFISASAIVSLYLVTRKSRELGSKVRELEASLAASLKKTTAE 60

Query: 61  RQGRIRAQQALRKAVAEPKSDSVKCTSYPMTPIGTIQSSFTTRNGTPRQSLLVPLARARL 120
           RQGRIRAQQALRKA+A+PKSD+V+CTSYPMTPIG IQS+F+TRNGTPRQSL+VPLARARL
Sbjct: 61  RQGRIRAQQALRKALADPKSDNVECTSYPMTPIGVIQSAFSTRNGTPRQSLVVPLARARL 120

Query: 121 VFSARIPPASIEGLGEYSHCWVIYVFHLNTDLDKLWKDPSKSKFKAKVR 169
           VFSARIPPASIEGLGEYSHCW+IYVFHLNTDLDKLWK+PSKS+FKAKVR
Sbjct: 121 VFSARIPPASIEGLGEYSHCWIIYVFHLNTDLDKLWKNPSKSRFKAKVR 169

The following BLAST results are available for this feature:
BLAST of Cucsat.G20249.T9 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9BU701.9e-0742.19tRNA (adenine(37)-N6)-methyltransferase OS=Homo sapiens OX=9606 GN=TRMO PE=1 SV=... [more]
Q562D62.7e-0638.27tRNA (adenine(37)-N6)-methyltransferase OS=Mus musculus OX=10090 GN=Trmo PE=2 SV... [more]
Q4V7E03.5e-0637.04tRNA (adenine(37)-N6)-methyltransferase OS=Rattus norvegicus OX=10116 GN=Trmo PE... [more]
BLAST of Cucsat.G20249.T9 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004149885.11.10e-106100.00uncharacterized protein LOC101219357 [Cucumis sativus] >KGN65285.1 hypothetical ... [more]
XP_038879627.14.73e-10293.49tRNA (adenine(37)-N6)-methyltransferase isoform X2 [Benincasa hispida][more]
XP_038879626.11.51e-10093.49tRNA (adenine(37)-N6)-methyltransferase isoform X1 [Benincasa hispida][more]
XP_008453657.14.30e-10095.27PREDICTED: tRNA (adenine(37)-N6)-methyltransferase isoform X1 [Cucumis melo][more]
TYK09463.14.30e-10095.27tRNA (adenine(37)-N6)-methyltransferase isoform X1 [Cucumis melo var. makuwa][more]
BLAST of Cucsat.G20249.T9 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LTM65.35e-107100.00TsaA-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G295140 P... [more]
A0A5D3CC842.08e-10095.27tRNA (Adenine(37)-N6)-methyltransferase isoform X1 OS=Cucumis melo var. makuwa O... [more]
A0A1S3BW922.08e-10095.27tRNA (Adenine(37)-N6)-methyltransferase isoform X1 OS=Cucumis melo OX=3656 GN=LO... [more]
A0A1S3BWW34.45e-10095.24uncharacterized protein LOC103494312 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A6J1BYL55.16e-9687.57uncharacterized protein LOC111006924 OS=Momordica charantia OX=3673 GN=LOC111006... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036414YaeB, N-terminal domain superfamilyGENE3D2.40.30.70coord: 89..170
e-value: 1.6E-15
score: 59.1
IPR023370TrmO-like, N-terminal domainPFAMPF01980TrmOcoord: 105..157
e-value: 1.8E-9
score: 37.9
IPR023370TrmO-like, N-terminal domainPROSITEPS51668TSAA_2coord: 90..172
score: 27.434145
IPR040372YaeB-likePANTHERPTHR12818UNCHARACTERIZEDcoord: 12..169
IPR036413YaeB-like superfamilySUPERFAMILY118196YaeB-likecoord: 86..152

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cucsat.G20249Cucsat.G20249gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G20249.T9.E1Cucsat.G20249.T9.E1exon
Cucsat.G20249.T9.E2Cucsat.G20249.T9.E2exon
Cucsat.G20249.T9.E3Cucsat.G20249.T9.E3exon
Cucsat.G20249.T9.E4Cucsat.G20249.T9.E4exon
Cucsat.G20249.T9.E5Cucsat.G20249.T9.E5exon
Cucsat.G20249.T9.E6Cucsat.G20249.T9.E6exon
Cucsat.G20249.T9.E7Cucsat.G20249.T9.E7exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G20249.T9.C4Cucsat.G20249.T9.C4CDS
Cucsat.G20249.T9.C3Cucsat.G20249.T9.C3CDS
Cucsat.G20249.T9.C2Cucsat.G20249.T9.C2CDS
Cucsat.G20249.T9.C1Cucsat.G20249.T9.C1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cucsat.G20249.T9Cucsat.G20249.T9-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030488 tRNA methylation
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0016430 tRNA (adenine-N6-)-methyltransferase activity