Cucsat.G19578.T14 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G19578.T14
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Cyclin
Location	ctg4: 2691462 .. 2694150 (-)
RNA-Seq Expression	Cucsat.G19578.T14
Synteny	Cucsat.G19578.T14

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCAAATGACATTAAATATTTGTCCTTGGTGACTATACATGAAAGGAAAGAATAAATATAGATTAAAGCTACTTTATTCATATTCCTCTCTAATATTCCCAAGAAATGAACCGAACCAGAATCGTGAGAAATTGCTGTCTACAGGCCAGAGTTATGAATAAGCTTGTTTTCAAACCAACTTTCTCTTTCTCTTCTTATTAAGAACTACCTAGCTTTTCTGCCTGACAAGTCAAGTATGCTCAAGCAATAAAGATTGAGAAGGTTATTGAAGAAGCTCTAAACTGTAAGCCCTTTTTACTGGTGCATTTCAGGCATTTTATGTCTTCTTTTCTTCCTATATTTCCCCAAAATTGCCTGCCTCATGGTCTGTGAGCCACTTTCGTATACCGTTATTGTCTGATTTTCGTTAAGATCACCCCCTCTTTGTTCTTTGAAGCACATGACCAGTTGCCTCCGGAATTTGATATCGTTCAAATAATTATAGGTAAGATTTAGCTTCCTTTTTCCATTTGAGTTTGAGGTAATTTCTGATGGAATGAATCGTTCTCTTGTAAGCTATTACTTAGCTTTAGAGTTCAACGACCTAAAAAGATGAGATTTCTCATCAGATATTGTTAGAGTCATTTAAATTTCTAGTGACATTAACTGATCTGTGGGGTCTGCTGCACGTACCGGATTCAGAAATCTAATTAAACCTTTTACCCTTCTATTTTCTAAGAGACCTTTCCCCTTTTCTTCCCTTTCAAGTTATTGACGATGAGAATCAATTGGTGGCACCAAAGCATCTCATTTGTTTAGCTGCGAAACATCTAAAGAACCATGTTTTCTTATCTCTATGATTCAAATTTCTGAATAAGTTTTAAGGAATATATGCAGCTTTAGAAGTTGGCTTTTGAATCTGTTGGGGGAATAGTCTTTATACCTTGCAATAATGTTGGTTCTAGTATCAGATTAAGAAGGGACCCACTGGTATTATTAGATTGCTTCTTTACCATTCACTATGGATTATGTATGAATTAAGCTATTAAAGTAAATAAGATTTGTGTATGTGCAGGTCTAGATAAACATGAGAGAAATGGCAAATAATGGTATGGATTTTCAAGTAGAAACAGATTCACTTCTTGGACTGAGTGAATCTGGAAAACTTATTTCGAGTTCTCCACAAGTTTTGTCAATTCTTTCCTCTGTTTTCGAGAAGTTGATTCAGAAAAATGAAAAGCTATTGAAAAGACTCAAAAAGAAAGACAGTGTTACAATTTTCCACAGTTCCCGGGCTCCTACCATGGGCATTGGACAATATATCGATCGCATCTTGAAGTACACGTGTTGTGGAACTGCTTGCTTAGTTGTTGCCTACATATACATTGAAAGGTATCTTCAAAAAACGGATGTTTACCTAACTTCTTTGAATGTCCACCGCCTTCTGATCACCAGCATCATGGTTGCAGCAAAGTTTATCGATGCTGGGTAAGTTCTACTGTTGCTTAGTTAGTTGTAATTCATTTAAGATGAAAAGATTTTGAGCTTGGTTAATATTCTGCAGTTTAGTTTCTTTATAGTTCACATCACACTCACTTTACTTCAGTTGGCTTCCCCTTCATTCGTTGAACTGAGATCATGGGAGGAGGAATCCTTAAGTTCAAGTTTTTATAGATGACCTTTTTTTAGTGAAGAAAGATGAATATATGATTCAGTCCCTCATGTTTGCTTCATTTTTCAAAATTTGTCCACAATCATTTAAAGGTTTATGGTTATCTACTTTATTACCAAGCCTTTATTGTCACAAAAATGTTAAAATTTATTGATGAAAATATTTTATTGTACTCGCGTTGGATCCCCCACCCTACATATGTATATTAGAGAAAGACGCCCACCCACATCACACACATATACATTATTCTTCTATTAAAGTTCAATGATGCTAAGGACTTAATTATAGTCAAGATATGAAAGATAGAAATGAAAATTTTAAACGATTTTTATACAAAATGTAATAGTGATTCAAACACTGGTTTGAAAGATATCAATAGCTAGTGAGTTGTTTGTTCGATGCTGCTATACAGATACTGTGCATCTCATCAGTCATATTCTGAGATCTCTGAAAACTTCCTTCCAATTTCTTGGATGTTATAACAATACTTTTTATGTATACAATTACACAACTTAATGTGTTATGATTCTATGCAGGTGCTATAACAATACTTTTTATGCCAAAGTAGGAGGAGTGAGTACAAAAGAAATGAACAGCTTGGAGATAGAATTTCTGTTCAATTTGGACTTCAGACTTCATGTCACTGCTGACGTTTTCACTACTCATTGTTTGCAGCTCCAAAAGGAAGTTCTTGGGGCAGAGAATCAAGTCGAACGTCGACCCGGTAACAAAGCTCGAACTAAATGTTTGCCTCAAATTACAGGCTATACTTGCAGTGCCATTTAAACACTCCCAATGAAATCTCCCTTTCTTGAATTTCATGGTTAGTTTAGTGTTTCAAAATCTGGAGTTGTATGGAATATTATATTTTATAAAGCTTCAATTCTTAGACTAAATCCAGAAAGTAAAAAGATTGTAGCAGGAAGAGGATGGGATTGTAGAGATTCAATGAAAAATGTTTCCAATGCATTGGAAATTTTTTATAATTCAATCATGATTGTTAGATGGATTCTTCAAACTTTTACTTTTTTATTTTAA

Coding sequence (CDS)

ATGAGAGAAATGGCAAATAATGGTATGGATTTTCAAGTAGAAACAGATTCACTTCTTGGACTGAGTGAATCTGGAAAACTTATTTCGAGTTCTCCACAAGTTTTGTCAATTCTTTCCTCTGTTTTCGAGAAGTTGATTCAGAAAAATGAAAAGCTATTGAAAAGACTCAAAAAGAAAGACAGTGTTACAATTTTCCACAGTTCCCGGGCTCCTACCATGGGCATTGGACAATATATCGATCGCATCTTGAAGTACACGTGTTGTGGAACTGCTTGCTTAGTTGTTGCCTACATATACATTGAAAGGTATCTTCAAAAAACGGATGTTTACCTAACTTCTTTGAATGTCCACCGCCTTCTGATCACCAGCATCATGGTTGCAGCAAAGTTTATCGATGCTGGGTGCTATAACAATACTTTTTATGCCAAAGTAGGAGGAGTGAGTACAAAAGAAATGAACAGCTTGGAGATAGAATTTCTGTTCAATTTGGACTTCAGACTTCATGTCACTGCTGACGTTTTCACTACTCATTGTTTGCAGCTCCAAAAGGAAGTTCTTGGGGCAGAGAATCAAGTCGAACGTCGACCCGGTAACAAAGCTCGAACTAAATGTTTGCCTCAAATTACAGGCTATACTTGCAGTGCCATTTAA

Protein sequence

MREMANNGMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFEKLIQKNEKLLKRLKKKDSVTIFHSSRAPTMGIGQYIDRILKYTCCGTACLVVAYIYIERYLQKTDVYLTSLNVHRLLITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFTTHCLQLQKEVLGAENQVERRPGNKARTKCLPQITGYTCSAI

Homology

[Close]

BLAST of Cucsat.G19578.T14 vs. ExPASy Swiss-Prot
Match: Q75HV0 (Cyclin-P3-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCP3-1 PE=3 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 1.4e-44
Identity = 92/168 (54.76%), Postives = 123/168 (73.21%), Query Frame = 0


Query: 19  LGLSESGKLISSSPQVLSILSSVFEKLIQKNEKLLKRLKKKDSVTIFHSSRAPTMGIGQY 78
           L +S+S K  +  P+VL +L++  ++ +QKNE LL   K KDS TIFH  RAP + I  Y
Sbjct: 23  LTVSQSKKNNTEYPKVLLLLAAYLDRSVQKNEDLLDSNKIKDSSTIFHGHRAPDLSIKLY 82

Query: 79  IDRILKYTCCGTACLVVAYIYIERYLQKTDVYLTSLNVHRLLITSIMVAAKFIDAGCYNN 138
            +RI KY+ C  +C V+A IY+ERYLQ+  VY+TSL+VHRLLITS++VAAKF D   +NN
Sbjct: 83  AERIFKYSECSPSCFVLALIYMERYLQQPHVYMTSLSVHRLLITSVVVAAKFTDDAFFNN 142

Query: 139 TFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFTTHCLQLQKEVL 187
            FYA+VGG+ST EMN LE++ LFNLDFRL V  + F ++CLQL+KE +
Sbjct: 143 AFYARVGGISTVEMNRLELDLLFNLDFRLKVDLETFGSYCLQLEKETM 190

[Close]

BLAST of Cucsat.G19578.T14 vs. ExPASy Swiss-Prot
Match: Q8LB60 (Cyclin-U3-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU3-1 PE=1 SV=2)

HSP 1 Score: 161.0 bits (406), Expect = 1.5e-38
Identity = 83/168 (49.40%), Postives = 112/168 (66.67%), Query Frame = 0


Query: 19  LGLSESGKLISSSPQVLSILSSVFEK--LIQKNEKLLKRLKKKDSVTIFHSSRAPTMGIG 78
           LGL   GK +   P VLS LSS  E+  L+  ++K+L  L   DSVT+F     P + I 
Sbjct: 19  LGLIIEGKRLKKPPTVLSRLSSSLERSLLLNHDDKIL--LGSPDSVTVFDGRSPPEISIA 78

Query: 79  QYIDRILKYTCCGTACLVVAYIYIERYLQKTDVYLTSLNVHRLLITSIMVAAKFIDAGCY 138
            Y+DRI KY+CC  +C V+A+IYI+ +L KT   L  LNVHRL+IT++M+AAK  D   +
Sbjct: 79  HYLDRIFKYSCCSPSCFVIAHIYIDHFLHKTRALLKPLNVHRLIITTVMLAAKVFDDRYF 138

Query: 139 NNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFTTHCLQLQKE 185
           NN +YA+VGGV+T+E+N LE+E LF LDF+L V    F THC QL+K+
Sbjct: 139 NNAYYARVGGVTTRELNRLEMELLFTLDFKLQVDPQTFHTHCCQLEKQ 184

[Close]

BLAST of Cucsat.G19578.T14 vs. ExPASy Swiss-Prot
Match: Q9LJ45 (Cyclin-U1-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU1-1 PE=1 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 1.6e-35
Identity = 81/174 (46.55%), Postives = 118/174 (67.82%), Query Frame = 0


Query: 14  ETDSLLGLSESGKLISSSPQVLSILSSVFEKLIQKNEKLLKRLKK-KDSVTIFHSSRAPT 73
           E D ++G   + +  +++P+VL+I+S V EKL+ +NE L K+ K    S+  FH  RAP+
Sbjct: 9   ELDPVVGPESATE--AATPRVLTIISHVMEKLVARNEWLAKQTKGFGKSLEAFHGVRAPS 68

Query: 74  MGIGQYIDRILKYTCCGTACLVVAYIYIERYLQK-TDVYLTSLNVHRLLITSIMVAAKFI 133
           + I +Y++RI KYT C  AC VV Y+YI+R   K     + SLNVHRLL+T +M+AAK +
Sbjct: 69  ISIAKYLERIYKYTKCSPACFVVGYVYIDRLAHKHPGSLVVSLNVHRLLVTCVMIAAKIL 128

Query: 134 DAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFTTHCLQLQKEV 186
           D   YNN FYA+VGGVS  ++N +E+E LF LDFR+ V+  VF ++C  L+KE+
Sbjct: 129 DDVHYNNEFYARVGGVSNADLNKMELELLFLLDFRVTVSFRVFESYCFHLEKEM 180

[Close]

BLAST of Cucsat.G19578.T14 vs. ExPASy Swiss-Prot
Match: Q9LY16 (Cyclin-U4-2 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-2 PE=1 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.7e-34
Identity = 66/156 (42.31%), Postives = 112/156 (71.79%), Query Frame = 0


Query: 32  PQVLSILSSVFEKLIQKNEKLLKRLKKKDSVTIFHSSRAPTMGIGQYIDRILKYTCCGTA 91
           P V++ +SS+ +++ + N+ L +  ++   ++ F++   P++ I  Y++RI KY  C  +
Sbjct: 21  PNVITAMSSLLQRVSETNDDLSRPFREHKRISAFNAVTKPSISIRSYMERIFKYADCSDS 80

Query: 92  CLVVAYIYIERYLQKTDVY-LTSLNVHRLLITSIMVAAKFIDAGCYNNTFYAKVGGVSTK 151
           C +VAYIY++R++QK  +  + S NVHRL+ITS++V+AKF+D  CYNN FYAKVGG++T+
Sbjct: 81  CYIVAYIYLDRFIQKQPLLPIDSSNVHRLIITSVLVSAKFMDDLCYNNAFYAKVGGITTE 140

Query: 152 EMNSLEIEFLFNLDFRLHVTADVFTTHCLQLQKEVL 187
           EMN LE++FLF + F+L+VT   +  +C  LQ+E++
Sbjct: 141 EMNLLELDFLFGIGFQLNVTISTYNDYCSSLQREMV 176

[Close]

BLAST of Cucsat.G19578.T14 vs. ExPASy Swiss-Prot
Match: O80513 (Cyclin-U4-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-1 PE=1 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.1e-33
Identity = 71/154 (46.10%), Postives = 106/154 (68.83%), Query Frame = 0


Query: 33  QVLSILSSVFEKLIQKNEKLLKRLKKKDSVTIFHSSRAPTMGIGQYIDRILKYTCCGTAC 92
           ++++ LSS+ E++ + N+   +   +   V++FH    PT+ I  Y++RI KY  C  +C
Sbjct: 12  KLIAFLSSLLERVAESNDLTRRVATQSQRVSVFHGLSRPTITIQSYLERIFKYANCSPSC 71

Query: 93  LVVAYIYIERYL-QKTDVYLTSLNVHRLLITSIMVAAKFIDAGCYNNTFYAKVGGVSTKE 152
            VVAY+Y++R+  ++  + + S NVHRLLITS+MVAAKF+D   YNN +YAKVGG+STKE
Sbjct: 72  FVVAYVYLDRFTHRQPSLPINSFNVHRLLITSVMVAAKFLDDLYYNNAYYAKVGGISTKE 131

Query: 153 MNSLEIEFLFNLDFRLHVTADVFTTHCLQLQKEV 186
           MN LE++FLF L F L+VT + F  +   LQKE+
Sbjct: 132 MNFLELDFLFGLGFELNVTPNTFNAYFSYLQKEM 165

[Close]

BLAST of Cucsat.G19578.T14 vs. NCBI nr
Match: XP_004139180.1 (cyclin-P3-1 isoform X1 [Cucumis sativus] >XP_011648813.1 cyclin-P3-1 isoform X1 [Cucumis sativus] >XP_011648815.1 cyclin-P3-1 isoform X1 [Cucumis sativus] >XP_011648816.1 cyclin-P3-1 isoform X1 [Cucumis sativus] >XP_031737277.1 cyclin-P3-1 isoform X1 [Cucumis sativus] >KGN60902.1 hypothetical protein Csa_023421 [Cucumis sativus])

HSP 1 Score: 421 bits (1082), Expect = 2.57e-148
Identity = 215/216 (99.54%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MREMANNGMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFEKLIQKNEKLLKRLKKKD 60
           MREMANNGMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFEKLIQKNEKLLKRLKKKD
Sbjct: 1   MREMANNGMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFEKLIQKNEKLLKRLKKKD 60

Query: 61  SVTIFHSSRAPTMGIGQYIDRILKYTCCGTACLVVAYIYIERYLQKTDVYLTSLNVHRLL 120
           SVTIFHSSRAPTMGIGQYIDRILKYTCCGTACLVVAYIYIERYLQKTDVYLTSLNVHRLL
Sbjct: 61  SVTIFHSSRAPTMGIGQYIDRILKYTCCGTACLVVAYIYIERYLQKTDVYLTSLNVHRLL 120

Query: 121 ITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFTTHCLQ 180
           ITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVF+THCLQ
Sbjct: 121 ITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQ 180

Query: 181 LQKEVLGAENQVERRPGNKARTKCLPQITGYTCSAI 216
           LQKEVLGAENQVERRPGNKARTKCLPQITGYTCSAI
Sbjct: 181 LQKEVLGAENQVERRPGNKARTKCLPQITGYTCSAI 216

[Close]

BLAST of Cucsat.G19578.T14 vs. NCBI nr
Match: XP_008454704.1 (PREDICTED: cyclin-P3-1 [Cucumis melo] >XP_008454712.1 PREDICTED: cyclin-P3-1 [Cucumis melo] >XP_008454721.1 PREDICTED: cyclin-P3-1 [Cucumis melo] >XP_008454727.1 PREDICTED: cyclin-P3-1 [Cucumis melo] >XP_008454735.1 PREDICTED: cyclin-P3-1 [Cucumis melo] >XP_016901631.1 PREDICTED: cyclin-P3-1 [Cucumis melo] >ABR67416.1 cyclin-dependent kinase [Cucumis melo subsp. melo])

HSP 1 Score: 408 bits (1048), Expect = 3.93e-143
Identity = 207/216 (95.83%), Postives = 211/216 (97.69%), Query Frame = 0


Query: 1   MREMANNGMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFEKLIQKNEKLLKRLKKKD 60
           MREMANN MDFQVETDSLLGLSESGKLISSSPQVLSILSSVFE+ IQKNEKLLKRLKKKD
Sbjct: 1   MREMANNSMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFERSIQKNEKLLKRLKKKD 60

Query: 61  SVTIFHSSRAPTMGIGQYIDRILKYTCCGTACLVVAYIYIERYLQKTDVYLTSLNVHRLL 120
           +VTIFHSSRAPTMGIGQYIDRILKYTCCGTACL+VAYIYIERYLQK DVYLTSLNVHRLL
Sbjct: 61  NVTIFHSSRAPTMGIGQYIDRILKYTCCGTACLIVAYIYIERYLQKMDVYLTSLNVHRLL 120

Query: 121 ITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFTTHCLQ 180
           ITSIMVAAKF DAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVF+THCLQ
Sbjct: 121 ITSIMVAAKFTDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQ 180

Query: 181 LQKEVLGAENQVERRPGNKARTKCLPQITGYTCSAI 216
           LQKEVLG ENQVERRPGNKARTKCLPQITGYTCSAI
Sbjct: 181 LQKEVLGGENQVERRPGNKARTKCLPQITGYTCSAI 216

[Close]

BLAST of Cucsat.G19578.T14 vs. NCBI nr
Match: KAA0047963.1 (cyclin-P3-1 [Cucumis melo var. makuwa] >TYK18312.1 cyclin-P3-1 [Cucumis melo var. makuwa])

HSP 1 Score: 402 bits (1033), Expect = 6.82e-141
Identity = 204/213 (95.77%), Postives = 208/213 (97.65%), Query Frame = 0


Query: 4   MANNGMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFEKLIQKNEKLLKRLKKKDSVT 63
           MANN MDFQVETDSLLGLSESGKLISSSPQVLSILSSVFE+ IQKNEKLLKRLKKKD+VT
Sbjct: 1   MANNSMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFERSIQKNEKLLKRLKKKDNVT 60

Query: 64  IFHSSRAPTMGIGQYIDRILKYTCCGTACLVVAYIYIERYLQKTDVYLTSLNVHRLLITS 123
           IFHSSRAPTMGIGQYIDRILKYTCCGTACL+VAYIYIERYLQK DVYLTSLNVHRLLITS
Sbjct: 61  IFHSSRAPTMGIGQYIDRILKYTCCGTACLIVAYIYIERYLQKMDVYLTSLNVHRLLITS 120

Query: 124 IMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFTTHCLQLQK 183
           IMVAAKF DAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVF+THCLQLQK
Sbjct: 121 IMVAAKFTDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQLQK 180

Query: 184 EVLGAENQVERRPGNKARTKCLPQITGYTCSAI 216
           EVLG ENQVERRPGNKARTKCLPQITGYTCSAI
Sbjct: 181 EVLGGENQVERRPGNKARTKCLPQITGYTCSAI 213

[Close]

BLAST of Cucsat.G19578.T14 vs. NCBI nr
Match: XP_038886918.1 (cyclin-P3-1 [Benincasa hispida] >XP_038886919.1 cyclin-P3-1 [Benincasa hispida] >XP_038886920.1 cyclin-P3-1 [Benincasa hispida] >XP_038886922.1 cyclin-P3-1 [Benincasa hispida] >XP_038886923.1 cyclin-P3-1 [Benincasa hispida])

HSP 1 Score: 382 bits (982), Expect = 4.51e-133
Identity = 191/216 (88.43%), Postives = 202/216 (93.52%), Query Frame = 0


Query: 1   MREMANNGMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFEKLIQKNEKLLKRLKKKD 60
           MRE+A+NGMDFQVE DSLLGL ESGKLI SSP+VLSILS+VFE+ IQKNEKLLKRLKKKD
Sbjct: 1   MREVADNGMDFQVEIDSLLGLGESGKLIPSSPRVLSILSTVFERSIQKNEKLLKRLKKKD 60

Query: 61  SVTIFHSSRAPTMGIGQYIDRILKYTCCGTACLVVAYIYIERYLQKTDVYLTSLNVHRLL 120
           +VTIFH SRAPTMGIGQYIDRILKYTCCGT CLVVAYIYIERYLQK D YLT+LN+HRLL
Sbjct: 61  NVTIFHGSRAPTMGIGQYIDRILKYTCCGTPCLVVAYIYIERYLQKMDAYLTNLNIHRLL 120

Query: 121 ITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFTTHCLQ 180
           ITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTAD+F+ HCLQ
Sbjct: 121 ITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADIFSNHCLQ 180

Query: 181 LQKEVLGAENQVERRPGNKARTKCLPQITGYTCSAI 216
           LQKE LG ENQV+ R GNK RTKCLPQITGYTCSAI
Sbjct: 181 LQKEALGGENQVDHRAGNKTRTKCLPQITGYTCSAI 216

[Close]

BLAST of Cucsat.G19578.T14 vs. NCBI nr
Match: XP_022946012.1 (cyclin-P3-1-like [Cucurbita moschata] >XP_022946013.1 cyclin-P3-1-like [Cucurbita moschata] >XP_023521765.1 cyclin-P3-1-like [Cucurbita pepo subsp. pepo] >XP_023545675.1 cyclin-P3-1 [Cucurbita pepo subsp. pepo] >XP_023545676.1 cyclin-P3-1 [Cucurbita pepo subsp. pepo] >KAG7030248.1 Cyclin-P3-1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 357 bits (917), Expect = 3.50e-123
Identity = 184/216 (85.19%), Postives = 192/216 (88.89%), Query Frame = 0


Query: 1   MREMANNGMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFEKLIQKNEKLLKRLKKKD 60
           MR+MA+NG DFQVETDSLLGLSESGKLI SS +VLSILSS FE+ IQKNEKLLKRLKKKD
Sbjct: 1   MRKMADNGKDFQVETDSLLGLSESGKLIPSSSRVLSILSSTFERSIQKNEKLLKRLKKKD 60

Query: 61  SVTIFHSSRAPTMGIGQYIDRILKYTCCGTACLVVAYIYIERYLQKTDVYLTSLNVHRLL 120
           SVTIFH SRAPTM  GQYIDRI KYTCCGT CLVVAYIYIERYLQK   YLTSLNVHRLL
Sbjct: 61  SVTIFHGSRAPTMSTGQYIDRISKYTCCGTPCLVVAYIYIERYLQKMGAYLTSLNVHRLL 120

Query: 121 ITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFTTHCLQ 180
           ITSIMVAAKF DAGCYNN FYAKVGGVSTKEMNS+EIE LFNLDFRLHVTADVF  HCLQ
Sbjct: 121 ITSIMVAAKFNDAGCYNNAFYAKVGGVSTKEMNSMEIELLFNLDFRLHVTADVFRAHCLQ 180

Query: 181 LQKEVLGAENQVERRPGNKARTKCLPQITGYTCSAI 216
           LQKE LG ENQ++RRPGNK RT+CLPQI  YTC AI
Sbjct: 181 LQKEGLG-ENQIDRRPGNKTRTRCLPQIASYTCRAI 215

[Close]

BLAST of Cucsat.G19578.T14 vs. ExPASy TrEMBL
Match: A0A0A0LJL5 (Cyclin OS=Cucumis sativus OX=3659 GN=Csa_2G021730 PE=3 SV=1)

HSP 1 Score: 421 bits (1082), Expect = 1.25e-148
Identity = 215/216 (99.54%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MREMANNGMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFEKLIQKNEKLLKRLKKKD 60
           MREMANNGMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFEKLIQKNEKLLKRLKKKD
Sbjct: 1   MREMANNGMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFEKLIQKNEKLLKRLKKKD 60

Query: 61  SVTIFHSSRAPTMGIGQYIDRILKYTCCGTACLVVAYIYIERYLQKTDVYLTSLNVHRLL 120
           SVTIFHSSRAPTMGIGQYIDRILKYTCCGTACLVVAYIYIERYLQKTDVYLTSLNVHRLL
Sbjct: 61  SVTIFHSSRAPTMGIGQYIDRILKYTCCGTACLVVAYIYIERYLQKTDVYLTSLNVHRLL 120

Query: 121 ITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFTTHCLQ 180
           ITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVF+THCLQ
Sbjct: 121 ITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQ 180

Query: 181 LQKEVLGAENQVERRPGNKARTKCLPQITGYTCSAI 216
           LQKEVLGAENQVERRPGNKARTKCLPQITGYTCSAI
Sbjct: 181 LQKEVLGAENQVERRPGNKARTKCLPQITGYTCSAI 216

[Close]

BLAST of Cucsat.G19578.T14 vs. ExPASy TrEMBL
Match: A0A1S3C004 (cyclin-P3-1 OS=Cucumis melo OX=3656 GN=LOC103495057 PE=3 SV=1)

HSP 1 Score: 408 bits (1048), Expect = 1.90e-143
Identity = 207/216 (95.83%), Postives = 211/216 (97.69%), Query Frame = 0


Query: 1   MREMANNGMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFEKLIQKNEKLLKRLKKKD 60
           MREMANN MDFQVETDSLLGLSESGKLISSSPQVLSILSSVFE+ IQKNEKLLKRLKKKD
Sbjct: 1   MREMANNSMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFERSIQKNEKLLKRLKKKD 60

Query: 61  SVTIFHSSRAPTMGIGQYIDRILKYTCCGTACLVVAYIYIERYLQKTDVYLTSLNVHRLL 120
           +VTIFHSSRAPTMGIGQYIDRILKYTCCGTACL+VAYIYIERYLQK DVYLTSLNVHRLL
Sbjct: 61  NVTIFHSSRAPTMGIGQYIDRILKYTCCGTACLIVAYIYIERYLQKMDVYLTSLNVHRLL 120

Query: 121 ITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFTTHCLQ 180
           ITSIMVAAKF DAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVF+THCLQ
Sbjct: 121 ITSIMVAAKFTDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQ 180

Query: 181 LQKEVLGAENQVERRPGNKARTKCLPQITGYTCSAI 216
           LQKEVLG ENQVERRPGNKARTKCLPQITGYTCSAI
Sbjct: 181 LQKEVLGGENQVERRPGNKARTKCLPQITGYTCSAI 216

[Close]

BLAST of Cucsat.G19578.T14 vs. ExPASy TrEMBL
Match: A6YTD1 (Cyclin-dependent kinase OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 408 bits (1048), Expect = 1.90e-143
Identity = 207/216 (95.83%), Postives = 211/216 (97.69%), Query Frame = 0


Query: 1   MREMANNGMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFEKLIQKNEKLLKRLKKKD 60
           MREMANN MDFQVETDSLLGLSESGKLISSSPQVLSILSSVFE+ IQKNEKLLKRLKKKD
Sbjct: 1   MREMANNSMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFERSIQKNEKLLKRLKKKD 60

Query: 61  SVTIFHSSRAPTMGIGQYIDRILKYTCCGTACLVVAYIYIERYLQKTDVYLTSLNVHRLL 120
           +VTIFHSSRAPTMGIGQYIDRILKYTCCGTACL+VAYIYIERYLQK DVYLTSLNVHRLL
Sbjct: 61  NVTIFHSSRAPTMGIGQYIDRILKYTCCGTACLIVAYIYIERYLQKMDVYLTSLNVHRLL 120

Query: 121 ITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFTTHCLQ 180
           ITSIMVAAKF DAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVF+THCLQ
Sbjct: 121 ITSIMVAAKFTDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQ 180

Query: 181 LQKEVLGAENQVERRPGNKARTKCLPQITGYTCSAI 216
           LQKEVLG ENQVERRPGNKARTKCLPQITGYTCSAI
Sbjct: 181 LQKEVLGGENQVERRPGNKARTKCLPQITGYTCSAI 216

[Close]

BLAST of Cucsat.G19578.T14 vs. ExPASy TrEMBL
Match: A0A5A7TWJ7 (Cyclin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G00220 PE=3 SV=1)

HSP 1 Score: 402 bits (1033), Expect = 3.30e-141
Identity = 204/213 (95.77%), Postives = 208/213 (97.65%), Query Frame = 0


Query: 4   MANNGMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFEKLIQKNEKLLKRLKKKDSVT 63
           MANN MDFQVETDSLLGLSESGKLISSSPQVLSILSSVFE+ IQKNEKLLKRLKKKD+VT
Sbjct: 1   MANNSMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFERSIQKNEKLLKRLKKKDNVT 60

Query: 64  IFHSSRAPTMGIGQYIDRILKYTCCGTACLVVAYIYIERYLQKTDVYLTSLNVHRLLITS 123
           IFHSSRAPTMGIGQYIDRILKYTCCGTACL+VAYIYIERYLQK DVYLTSLNVHRLLITS
Sbjct: 61  IFHSSRAPTMGIGQYIDRILKYTCCGTACLIVAYIYIERYLQKMDVYLTSLNVHRLLITS 120

Query: 124 IMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFTTHCLQLQK 183
           IMVAAKF DAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVF+THCLQLQK
Sbjct: 121 IMVAAKFTDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQLQK 180

Query: 184 EVLGAENQVERRPGNKARTKCLPQITGYTCSAI 216
           EVLG ENQVERRPGNKARTKCLPQITGYTCSAI
Sbjct: 181 EVLGGENQVERRPGNKARTKCLPQITGYTCSAI 213

[Close]

BLAST of Cucsat.G19578.T14 vs. ExPASy TrEMBL
Match: A0A6J1G2L7 (Cyclin OS=Cucurbita moschata OX=3662 GN=LOC111450231 PE=3 SV=1)

HSP 1 Score: 357 bits (917), Expect = 1.69e-123
Identity = 184/216 (85.19%), Postives = 192/216 (88.89%), Query Frame = 0


Query: 1   MREMANNGMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFEKLIQKNEKLLKRLKKKD 60
           MR+MA+NG DFQVETDSLLGLSESGKLI SS +VLSILSS FE+ IQKNEKLLKRLKKKD
Sbjct: 1   MRKMADNGKDFQVETDSLLGLSESGKLIPSSSRVLSILSSTFERSIQKNEKLLKRLKKKD 60

Query: 61  SVTIFHSSRAPTMGIGQYIDRILKYTCCGTACLVVAYIYIERYLQKTDVYLTSLNVHRLL 120
           SVTIFH SRAPTM  GQYIDRI KYTCCGT CLVVAYIYIERYLQK   YLTSLNVHRLL
Sbjct: 61  SVTIFHGSRAPTMSTGQYIDRISKYTCCGTPCLVVAYIYIERYLQKMGAYLTSLNVHRLL 120

Query: 121 ITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFTTHCLQ 180
           ITSIMVAAKF DAGCYNN FYAKVGGVSTKEMNS+EIE LFNLDFRLHVTADVF  HCLQ
Sbjct: 121 ITSIMVAAKFNDAGCYNNAFYAKVGGVSTKEMNSMEIELLFNLDFRLHVTADVFRAHCLQ 180

Query: 181 LQKEVLGAENQVERRPGNKARTKCLPQITGYTCSAI 216
           LQKE LG ENQ++RRPGNK RT+CLPQI  YTC AI
Sbjct: 181 LQKEGLG-ENQIDRRPGNKTRTRCLPQIASYTCRAI 215

The following BLAST results are available for this feature:

BLAST of Cucsat.G19578.T14 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q75HV0	1.4e-44	54.76	Cyclin-P3-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCP3-1 PE=3 SV=1	[more]
Q8LB60	1.5e-38	49.40	Cyclin-U3-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU3-1 PE=1 SV=2	[more]
Q9LJ45	1.6e-35	46.55	Cyclin-U1-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU1-1 PE=1 SV=1	[more]
Q9LY16	1.7e-34	42.31	Cyclin-U4-2 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-2 PE=1 SV=1	[more]
O80513	1.1e-33	46.10	Cyclin-U4-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-1 PE=1 SV=1	[more]

BLAST of Cucsat.G19578.T14 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139180.1	2.57e-148	99.54	cyclin-P3-1 isoform X1 [Cucumis sativus] >XP_011648813.1 cyclin-P3-1 isoform X1 ...	[more]
XP_008454704.1	3.93e-143	95.83	PREDICTED: cyclin-P3-1 [Cucumis melo] >XP_008454712.1 PREDICTED: cyclin-P3-1 [Cu...	[more]
KAA0047963.1	6.82e-141	95.77	cyclin-P3-1 [Cucumis melo var. makuwa] >TYK18312.1 cyclin-P3-1 [Cucumis melo var...	[more]
XP_038886918.1	4.51e-133	88.43	cyclin-P3-1 [Benincasa hispida] >XP_038886919.1 cyclin-P3-1 [Benincasa hispida] ...	[more]
XP_022946012.1	3.50e-123	85.19	cyclin-P3-1-like [Cucurbita moschata] >XP_022946013.1 cyclin-P3-1-like [Cucurbit...	[more]

BLAST of Cucsat.G19578.T14 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LJL5	1.25e-148	99.54	Cyclin OS=Cucumis sativus OX=3659 GN=Csa_2G021730 PE=3 SV=1	[more]
A0A1S3C004	1.90e-143	95.83	cyclin-P3-1 OS=Cucumis melo OX=3656 GN=LOC103495057 PE=3 SV=1	[more]
A6YTD1	1.90e-143	95.83	Cyclin-dependent kinase OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1	[more]
A0A5A7TWJ7	3.30e-141	95.77	Cyclin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G00220 PE=3 SV...	[more]
A0A6J1G2L7	1.69e-123	85.19	Cyclin OS=Cucurbita moschata OX=3662 GN=LOC111450231 PE=3 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.472.10		coord: 28..210 e-value: 4.8E-51 score: 175.3
None	No IPR available	PANTHER	PTHR15615	UNCHARACTERIZED	coord: 5..199
None	No IPR available	PANTHER	PTHR15615:SF80	CYCLIN	coord: 5..199
IPR013922	Cyclin PHO80-like	PFAM	PF08613	Cyclin	coord: 54..167 e-value: 3.6E-33 score: 115.2
IPR012389	Cyclin P/U	PIRSF	PIRSF027110	PREG	coord: 11..210 e-value: 1.5E-66 score: 222.1
IPR036915	Cyclin-like superfamily	SUPERFAMILY	47954	Cyclin-like	coord: 78..168

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G19578	Cucsat.G19578	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G19578.T14.E1	Cucsat.G19578.T14.E1	exon
Cucsat.G19578.T14.E2	Cucsat.G19578.T14.E2	exon
Cucsat.G19578.T14.E3	Cucsat.G19578.T14.E3	exon
Cucsat.G19578.T14.E4	Cucsat.G19578.T14.E4	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G19578.T14.C2	Cucsat.G19578.T14.C2	CDS
Cucsat.G19578.T14.C1	Cucsat.G19578.T14.C1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G19578.T14	Cucsat.G19578.T14-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000079	regulation of cyclin-dependent protein serine/threonine kinase activity
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0019901	protein kinase binding