Cucsat.G19578 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G19578
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Cyclin
Location	ctg4: 2691462 .. 2694084 (-)
RNA-Seq Expression	Cucsat.G19578
Synteny	Cucsat.G19578

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTCTTACGAACGTGTGTTGCTTTTTTTCTCAAACCCCATTTCTTGTGCTACACTCCAAATTCCAATGAAACCCATCAAACCCCAAAATTTTCCCATTCCACCCAATTCATTTTCATCTCAAAGTTTCCCCCCATTTTCCTGGGCAAACAGACAAAATTCATCTGTCCAACACCACTTCTACAATCAACCTCACTCACCCGTTTCCATGGAACCACCTTTAAATCCTTTCTTTCCATTTCCGTTTGATCTGAAAACAGGATTCTCTATCCTTTTGTGCAAACCCCTTGTCAAGATTTGATCAGATAGCTCAGAATCCATCAATCTGTAAGCAAGTTTTTCTTACCCAACTTCAGAATCCAGATGGGTCTTTTCTGATTGTGATAATTAATATGTGAAGAGGGAGGGAAAAAAAAAATGAAGCAATGTGATGATGATTCTTGTTGCTGTTTTTCTGTCTTCTGGATTTGAACTTTGAACCGCACTTTCGGTTGTATAATGATTTTCCCCACATTTTGATTTCGAATTTGGGGTCCCCAAAAGGTAAGAGATGATGATAATCCTGCAAATTAATACCAACGAAAAGGAAACTTTATAGCTTTATGTGATTTTCTTGGAATTTTTGGCCTGCCAACAAGTCATTATTGTTGTTGTTTGTTCAGCCTCTGCTCATAGCTTAAAATTTCCATTGATTGATCTGTGCTTTTCACTTTAGTATTCTGGTAGAATGGAATCTCTATGTTCTGTTTCTTTCTCTCTCTGTGCTGGATATACCTCAGTGAGTATTCGATACTTTTTTCCCCTATAAGGTTTCTTAGATGAATGCTCCAAATGCTAATACTTTTCCATTGTGATTTGAAAGCTTGAATAATTGTGCCCAAATGGACCCAAATGACATTAAATATTTGTCCTTGGTGACTATACATGAAAGGAAAGAATAAATATAGATTAAAGCTACTTTATTCATATTCCTCTCTAATATTCCCAAGAAATGAACCGAACCAGAATCGTGAGAAATTGCTGTCTACAGGCCAGAGTTATGAATAAGCTTGTTTTCAAACCAACTTTCTCTTTCTCTTCTTATTAAGAACTACCTAGCTTTTCTGCCTGACAAGTCAAGTATGCTCAAGCAATAAAGATTGAGAAGGTTATTGAAGAAGCTCTAAACTGTAAGCCCTTTTTACTGGTGCATTTCAGGCATTTTATGTCTTCTTTTCTTCCTATATTTCCCCAAAATTGCCTGCCTCATGGTCTGTGAGCCACTTTCGTATACCGTTATTGTCTGATTTTCGTTAAGATCACCCCCTCTTTGTTCTTTGAAGCACATGACCAGTTGCCTCCGGAATTTGATATCGTTCAAATAATTATAGGTAAGATTTAGCTTCCTTTTTCCATTTGAGTTTGAGGTAATTTCTGATGGAATGAATCGTTCTCTTGTAAGCTATTACTTAGCTTTAGAGTTCAACGACCTAAAAAGATGAGATTTCTCATCAGATATTGTTAGAGTCATTTAAATTTCTAGTGACATTAACTGATCTGTGGGGTCTGCTGCACGTACCGGATTCAGAAATCTAATTAAACCTTTTACCCTTCTATTTTCTAAGAGACCTTTCCCCTTTTCTTCCCTTTCAAGTTATTGACGATGAGAATCAATTGGTGGCACCAAAGCATCTCATTTGTTTAGCTGCGAAACATCTAAAGAACCATGTTTTCTTATCTCTATGATTCAAATTTCTGAATAAGTTTTAAGGAATATATGCAGCTTTAGAAGTTGGCTTTTGAATCTGTTGGGGGAATAGTCTTTATACCTTGCAATAATGTTGGTTCTAGTATCAGATTAAGAAGGGACCCACTGGTATTATTAGATTGCTTCTTTACCATTCACTATGGATTATGTATGAATTAAGCTATTAAAGTAAATAAGATTTGTGTATGTGCAGGTCTAGATAAACATGAGAGAAATGGCAAATAATGGTATGGATTTTCAAGTAGAAACAGATTCACTTCTTGGACTGAGTGAATCTGGAAAACTTATTTCGAGTTCTCCACAAGTTTTGTCAATTCTTTCCTCTGTTTTCGAGAAGTTGATTCAGAAAAATGAAAAGCTATTGAAAAGACTCAAAAAGAAAGACAGTGTTACAATTTTCCACAGTTCCCGGGCTCCTACCATGGGCATTGGACAATATATCGATCGCATCTTGAAGTACACGTGTTGTGGAACTGCTTGCTTAGTTGTTGCCTACATATACATTGAAAGGTATCTTCAAAAAACGGATGTTTACCTAACTTCTTTGAATGTCCACCGCCTTCTGATCACCAGCATCATGGTTGCAGCAAAGTTTATCGATGCTGGGTAAGTTCTACTGTTGCTTAGTTAGTTGTAATTCATTTAAGATGAAAAGATTTTGAGCTTGGTTAATATTCTGCAGTTTAGTTTCTTTATAGTTCACATCACACTCACTTTACTTCAGTTGGCTTCCCCTTCATTCGTTGAACTGAGATCATGGGAGGAGGAATCCTTAAGTTCAAGTTTTTATAGATGACCTTTTTTTAGTGAAGAAAGATGAATATATGATTCAGTCCCTCATGTTTGCTTCATTTTTCAAAATTTGTCCACAATCATTTAAAGGTTTATGGTTATCTACTTTATTACCAAGCCTTTATTGTCACAAAAATGTTAAAATTTATTGATGAAAATATTTTATTGTACTCGCGTTGGATCCCCCACCCTACATATGTATATTAGAGAAAGACGCCCACCCACATCACACACATATACATTATTCTTCTATTAAAGTTCAATGATGCTAAGGACTTAATTATAGTCAAGATATGAAAGATAGAAATGAAAATTTTAAACGATTTTTATACAAAATGTAATAGTGATTCAAACACTGGTTTGAAAGATATCAATAGCTAGTGAGTTGTTTGTTCGATGCTGCTATACAGATACTGTGCATCTCATCAGTCATATTCTGAGATCTCTGAAAACTTCCTTCCAATTTCTTGGATGTTATAACAATACTTTTTATGTATACAATTACACAACTTAATGTGTTATGATTCTATGCAGGTGCTATAACAATACTTTTTATGCCAAAGTAGGAGGAGTGAGTACAAAAGAAATGAACAGCTTGGAGATAGAATTTCTGTTCAATTTGGACTTCAGACTTCATGTCACTGCTGACGTTTTCACTACTCATTGTTTGCAGCTCCAAAAGGAAGTTCTTGGGGCAGAGAATCAAGTCGAACGTCGACCCGGTAACAAAGCTCGAACTAAATGTTTGCCTCAAATTACAGGCTATACTTGCAGTGCCATTTAAACACTCCCAATGAAATCTCCCTTTCTTGAATTTCATGGTTAGTTTAGTGTTTCAAAATCTGGAGTTGTATGGAATATTATATTTTATAAAGCTTCAATTCTTAGACTAAATCCAGAAAGTAAAAAGATTGTAGCAGGAAGAGGATGGGATTGTAGAGATTCAATGAAAAATGTTTCCAATGCATTGGAAATTTTTTATAATTCAATCATGATTGTTAGATGGATTCTTCAAACTTTTACTTTTTTATTTTAAATTTTTTTAAC

Coding sequence (CDS)

ATGAGAGAAATGGCAAATAATGGTATGGATTTTCAAGTAGAAACAGATTCACTTCTTGGACTGAGTGAATCTGGAAAACTTATTTCGAGTTCTCCACAAGTTTTGTCAATTCTTTCCTCTGTTTTCGAGAAGTTGATTCAGAAAAATGAAAAGCTATTGAAAAGACTCAAAAAGAAAGACAGTGTTACAATTTTCCACAGTTCCCGGGCTCCTACCATGGGCATTGGACAATATATCGATCGCATCTTGAAGTACACGTGTTGTGGAACTGCTTGCTTAGTTGTTGCCTACATATACATTGAAAGGTATCTTCAAAAAACGGATGTTTACCTAACTTCTTTGAATGTCCACCGCCTTCTGATCACCAGCATCATGGTTGCAGCAAAGTTTATCGATGCTGGGTGCTATAACAATACTTTTTATGCCAAAGTAGGAGGACTCCAAAAGGAAGTTCTTGGGGCAGAGAATCAAGTCGAACGTCGACCCGGTAACAAAGCTCGAACTAAATGTTTGCCTCAAATTACAGGCTATACTTGCAGTGCCATTTAA

Protein sequence

MREMANNGMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFEKLIQKNEKLLKRLKKKDSVTIFHSSRAPTMGIGQYIDRILKYTCCGTACLVVAYIYIERYLQKTDVYLTSLNVHRLLITSIMVAAKFIDAGCYNNTFYAKVGGLQKEVLGAENQVERRPGNKARTKCLPQITGYTCSAI

Homology

[Close]

BLAST of Cucsat.G19578 vs. ExPASy Swiss-Prot
Match: Q75HV0 (Cyclin-P3-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCP3-1 PE=3 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 1.4e-44
Identity = 92/168 (54.76%), Postives = 123/168 (73.21%), Query Frame = 0


Query: 19  LGLSESGKLISSSPQVLSILSSVFEKLIQKNEKLLKRLKKKDSVTIFHSSRAPTMGIGQY 78
           L +S+S K  +  P+VL +L++  ++ +QKNE LL   K KDS TIFH  RAP + I  Y
Sbjct: 23  LTVSQSKKNNTEYPKVLLLLAAYLDRSVQKNEDLLDSNKIKDSSTIFHGHRAPDLSIKLY 82

Query: 79  IDRILKYTCCGTACLVVAYIYIERYLQKTDVYLTSLNVHRLLITSIMVAAKFIDAGCYNN 138
            +RI KY+ C  +C V+A IY+ERYLQ+  VY+TSL+VHRLLITS++VAAKF D   +NN
Sbjct: 83  AERIFKYSECSPSCFVLALIYMERYLQQPHVYMTSLSVHRLLITSVVVAAKFTDDAFFNN 142

Query: 139 TFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFTTHCLQLQKEVL 187
            FYA+VGG+ST EMN LE++ LFNLDFRL V  + F ++CLQL+KE +
Sbjct: 143 AFYARVGGISTVEMNRLELDLLFNLDFRLKVDLETFGSYCLQLEKETM 190

[Close]

BLAST of Cucsat.G19578 vs. ExPASy Swiss-Prot
Match: Q8LB60 (Cyclin-U3-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU3-1 PE=1 SV=2)

HSP 1 Score: 161.0 bits (406), Expect = 1.5e-38
Identity = 83/168 (49.40%), Postives = 112/168 (66.67%), Query Frame = 0


Query: 19  LGLSESGKLISSSPQVLSILSSVFEK--LIQKNEKLLKRLKKKDSVTIFHSSRAPTMGIG 78
           LGL   GK +   P VLS LSS  E+  L+  ++K+L  L   DSVT+F     P + I 
Sbjct: 19  LGLIIEGKRLKKPPTVLSRLSSSLERSLLLNHDDKIL--LGSPDSVTVFDGRSPPEISIA 78

Query: 79  QYIDRILKYTCCGTACLVVAYIYIERYLQKTDVYLTSLNVHRLLITSIMVAAKFIDAGCY 138
            Y+DRI KY+CC  +C V+A+IYI+ +L KT   L  LNVHRL+IT++M+AAK  D   +
Sbjct: 79  HYLDRIFKYSCCSPSCFVIAHIYIDHFLHKTRALLKPLNVHRLIITTVMLAAKVFDDRYF 138

Query: 139 NNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFTTHCLQLQKE 185
           NN +YA+VGGV+T+E+N LE+E LF LDF+L V    F THC QL+K+
Sbjct: 139 NNAYYARVGGVTTRELNRLEMELLFTLDFKLQVDPQTFHTHCCQLEKQ 184

[Close]

BLAST of Cucsat.G19578 vs. ExPASy Swiss-Prot
Match: Q9LJ45 (Cyclin-U1-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU1-1 PE=1 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 1.6e-35
Identity = 81/174 (46.55%), Postives = 118/174 (67.82%), Query Frame = 0


Query: 14  ETDSLLGLSESGKLISSSPQVLSILSSVFEKLIQKNEKLLKRLKK-KDSVTIFHSSRAPT 73
           E D ++G   + +  +++P+VL+I+S V EKL+ +NE L K+ K    S+  FH  RAP+
Sbjct: 9   ELDPVVGPESATE--AATPRVLTIISHVMEKLVARNEWLAKQTKGFGKSLEAFHGVRAPS 68

Query: 74  MGIGQYIDRILKYTCCGTACLVVAYIYIERYLQK-TDVYLTSLNVHRLLITSIMVAAKFI 133
           + I +Y++RI KYT C  AC VV Y+YI+R   K     + SLNVHRLL+T +M+AAK +
Sbjct: 69  ISIAKYLERIYKYTKCSPACFVVGYVYIDRLAHKHPGSLVVSLNVHRLLVTCVMIAAKIL 128

Query: 134 DAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFTTHCLQLQKEV 186
           D   YNN FYA+VGGVS  ++N +E+E LF LDFR+ V+  VF ++C  L+KE+
Sbjct: 129 DDVHYNNEFYARVGGVSNADLNKMELELLFLLDFRVTVSFRVFESYCFHLEKEM 180

[Close]

BLAST of Cucsat.G19578 vs. ExPASy Swiss-Prot
Match: Q9LY16 (Cyclin-U4-2 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-2 PE=1 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.7e-34
Identity = 66/156 (42.31%), Postives = 112/156 (71.79%), Query Frame = 0


Query: 32  PQVLSILSSVFEKLIQKNEKLLKRLKKKDSVTIFHSSRAPTMGIGQYIDRILKYTCCGTA 91
           P V++ +SS+ +++ + N+ L +  ++   ++ F++   P++ I  Y++RI KY  C  +
Sbjct: 21  PNVITAMSSLLQRVSETNDDLSRPFREHKRISAFNAVTKPSISIRSYMERIFKYADCSDS 80

Query: 92  CLVVAYIYIERYLQKTDVY-LTSLNVHRLLITSIMVAAKFIDAGCYNNTFYAKVGGVSTK 151
           C +VAYIY++R++QK  +  + S NVHRL+ITS++V+AKF+D  CYNN FYAKVGG++T+
Sbjct: 81  CYIVAYIYLDRFIQKQPLLPIDSSNVHRLIITSVLVSAKFMDDLCYNNAFYAKVGGITTE 140

Query: 152 EMNSLEIEFLFNLDFRLHVTADVFTTHCLQLQKEVL 187
           EMN LE++FLF + F+L+VT   +  +C  LQ+E++
Sbjct: 141 EMNLLELDFLFGIGFQLNVTISTYNDYCSSLQREMV 176

[Close]

BLAST of Cucsat.G19578 vs. ExPASy Swiss-Prot
Match: O80513 (Cyclin-U4-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-1 PE=1 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.1e-33
Identity = 71/154 (46.10%), Postives = 106/154 (68.83%), Query Frame = 0


Query: 33  QVLSILSSVFEKLIQKNEKLLKRLKKKDSVTIFHSSRAPTMGIGQYIDRILKYTCCGTAC 92
           ++++ LSS+ E++ + N+   +   +   V++FH    PT+ I  Y++RI KY  C  +C
Sbjct: 12  KLIAFLSSLLERVAESNDLTRRVATQSQRVSVFHGLSRPTITIQSYLERIFKYANCSPSC 71

Query: 93  LVVAYIYIERYL-QKTDVYLTSLNVHRLLITSIMVAAKFIDAGCYNNTFYAKVGGVSTKE 152
            VVAY+Y++R+  ++  + + S NVHRLLITS+MVAAKF+D   YNN +YAKVGG+STKE
Sbjct: 72  FVVAYVYLDRFTHRQPSLPINSFNVHRLLITSVMVAAKFLDDLYYNNAYYAKVGGISTKE 131

Query: 153 MNSLEIEFLFNLDFRLHVTADVFTTHCLQLQKEV 186
           MN LE++FLF L F L+VT + F  +   LQKE+
Sbjct: 132 MNFLELDFLFGLGFELNVTPNTFNAYFSYLQKEM 165

[Close]

BLAST of Cucsat.G19578 vs. NCBI nr
Match: XP_004139180.1 (cyclin-P3-1 isoform X1 [Cucumis sativus] >XP_011648813.1 cyclin-P3-1 isoform X1 [Cucumis sativus] >XP_011648815.1 cyclin-P3-1 isoform X1 [Cucumis sativus] >XP_011648816.1 cyclin-P3-1 isoform X1 [Cucumis sativus] >XP_031737277.1 cyclin-P3-1 isoform X1 [Cucumis sativus] >KGN60902.1 hypothetical protein Csa_023421 [Cucumis sativus])

HSP 1 Score: 421 bits (1082), Expect = 2.57e-148
Identity = 215/216 (99.54%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MREMANNGMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFEKLIQKNEKLLKRLKKKD 60
           MREMANNGMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFEKLIQKNEKLLKRLKKKD
Sbjct: 1   MREMANNGMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFEKLIQKNEKLLKRLKKKD 60

Query: 61  SVTIFHSSRAPTMGIGQYIDRILKYTCCGTACLVVAYIYIERYLQKTDVYLTSLNVHRLL 120
           SVTIFHSSRAPTMGIGQYIDRILKYTCCGTACLVVAYIYIERYLQKTDVYLTSLNVHRLL
Sbjct: 61  SVTIFHSSRAPTMGIGQYIDRILKYTCCGTACLVVAYIYIERYLQKTDVYLTSLNVHRLL 120

Query: 121 ITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFTTHCLQ 180
           ITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVF+THCLQ
Sbjct: 121 ITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQ 180

Query: 181 LQKEVLGAENQVERRPGNKARTKCLPQITGYTCSAI 216
           LQKEVLGAENQVERRPGNKARTKCLPQITGYTCSAI
Sbjct: 181 LQKEVLGAENQVERRPGNKARTKCLPQITGYTCSAI 216

[Close]

BLAST of Cucsat.G19578 vs. NCBI nr
Match: XP_008454704.1 (PREDICTED: cyclin-P3-1 [Cucumis melo] >XP_008454712.1 PREDICTED: cyclin-P3-1 [Cucumis melo] >XP_008454721.1 PREDICTED: cyclin-P3-1 [Cucumis melo] >XP_008454727.1 PREDICTED: cyclin-P3-1 [Cucumis melo] >XP_008454735.1 PREDICTED: cyclin-P3-1 [Cucumis melo] >XP_016901631.1 PREDICTED: cyclin-P3-1 [Cucumis melo] >ABR67416.1 cyclin-dependent kinase [Cucumis melo subsp. melo])

HSP 1 Score: 408 bits (1048), Expect = 3.93e-143
Identity = 207/216 (95.83%), Postives = 211/216 (97.69%), Query Frame = 0


Query: 1   MREMANNGMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFEKLIQKNEKLLKRLKKKD 60
           MREMANN MDFQVETDSLLGLSESGKLISSSPQVLSILSSVFE+ IQKNEKLLKRLKKKD
Sbjct: 1   MREMANNSMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFERSIQKNEKLLKRLKKKD 60

Query: 61  SVTIFHSSRAPTMGIGQYIDRILKYTCCGTACLVVAYIYIERYLQKTDVYLTSLNVHRLL 120
           +VTIFHSSRAPTMGIGQYIDRILKYTCCGTACL+VAYIYIERYLQK DVYLTSLNVHRLL
Sbjct: 61  NVTIFHSSRAPTMGIGQYIDRILKYTCCGTACLIVAYIYIERYLQKMDVYLTSLNVHRLL 120

Query: 121 ITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFTTHCLQ 180
           ITSIMVAAKF DAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVF+THCLQ
Sbjct: 121 ITSIMVAAKFTDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQ 180

Query: 181 LQKEVLGAENQVERRPGNKARTKCLPQITGYTCSAI 216
           LQKEVLG ENQVERRPGNKARTKCLPQITGYTCSAI
Sbjct: 181 LQKEVLGGENQVERRPGNKARTKCLPQITGYTCSAI 216

[Close]

BLAST of Cucsat.G19578 vs. NCBI nr
Match: KAA0047963.1 (cyclin-P3-1 [Cucumis melo var. makuwa] >TYK18312.1 cyclin-P3-1 [Cucumis melo var. makuwa])

HSP 1 Score: 402 bits (1033), Expect = 6.82e-141
Identity = 204/213 (95.77%), Postives = 208/213 (97.65%), Query Frame = 0


Query: 4   MANNGMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFEKLIQKNEKLLKRLKKKDSVT 63
           MANN MDFQVETDSLLGLSESGKLISSSPQVLSILSSVFE+ IQKNEKLLKRLKKKD+VT
Sbjct: 1   MANNSMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFERSIQKNEKLLKRLKKKDNVT 60

Query: 64  IFHSSRAPTMGIGQYIDRILKYTCCGTACLVVAYIYIERYLQKTDVYLTSLNVHRLLITS 123
           IFHSSRAPTMGIGQYIDRILKYTCCGTACL+VAYIYIERYLQK DVYLTSLNVHRLLITS
Sbjct: 61  IFHSSRAPTMGIGQYIDRILKYTCCGTACLIVAYIYIERYLQKMDVYLTSLNVHRLLITS 120

Query: 124 IMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFTTHCLQLQK 183
           IMVAAKF DAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVF+THCLQLQK
Sbjct: 121 IMVAAKFTDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQLQK 180

Query: 184 EVLGAENQVERRPGNKARTKCLPQITGYTCSAI 216
           EVLG ENQVERRPGNKARTKCLPQITGYTCSAI
Sbjct: 181 EVLGGENQVERRPGNKARTKCLPQITGYTCSAI 213

[Close]

BLAST of Cucsat.G19578 vs. NCBI nr
Match: XP_038886918.1 (cyclin-P3-1 [Benincasa hispida] >XP_038886919.1 cyclin-P3-1 [Benincasa hispida] >XP_038886920.1 cyclin-P3-1 [Benincasa hispida] >XP_038886922.1 cyclin-P3-1 [Benincasa hispida] >XP_038886923.1 cyclin-P3-1 [Benincasa hispida])

HSP 1 Score: 382 bits (982), Expect = 4.51e-133
Identity = 191/216 (88.43%), Postives = 202/216 (93.52%), Query Frame = 0


Query: 1   MREMANNGMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFEKLIQKNEKLLKRLKKKD 60
           MRE+A+NGMDFQVE DSLLGL ESGKLI SSP+VLSILS+VFE+ IQKNEKLLKRLKKKD
Sbjct: 1   MREVADNGMDFQVEIDSLLGLGESGKLIPSSPRVLSILSTVFERSIQKNEKLLKRLKKKD 60

Query: 61  SVTIFHSSRAPTMGIGQYIDRILKYTCCGTACLVVAYIYIERYLQKTDVYLTSLNVHRLL 120
           +VTIFH SRAPTMGIGQYIDRILKYTCCGT CLVVAYIYIERYLQK D YLT+LN+HRLL
Sbjct: 61  NVTIFHGSRAPTMGIGQYIDRILKYTCCGTPCLVVAYIYIERYLQKMDAYLTNLNIHRLL 120

Query: 121 ITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFTTHCLQ 180
           ITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTAD+F+ HCLQ
Sbjct: 121 ITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADIFSNHCLQ 180

Query: 181 LQKEVLGAENQVERRPGNKARTKCLPQITGYTCSAI 216
           LQKE LG ENQV+ R GNK RTKCLPQITGYTCSAI
Sbjct: 181 LQKEALGGENQVDHRAGNKTRTKCLPQITGYTCSAI 216

[Close]

BLAST of Cucsat.G19578 vs. NCBI nr
Match: XP_022946012.1 (cyclin-P3-1-like [Cucurbita moschata] >XP_022946013.1 cyclin-P3-1-like [Cucurbita moschata] >XP_023521765.1 cyclin-P3-1-like [Cucurbita pepo subsp. pepo] >XP_023545675.1 cyclin-P3-1 [Cucurbita pepo subsp. pepo] >XP_023545676.1 cyclin-P3-1 [Cucurbita pepo subsp. pepo] >KAG7030248.1 Cyclin-P3-1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 357 bits (917), Expect = 3.50e-123
Identity = 184/216 (85.19%), Postives = 192/216 (88.89%), Query Frame = 0


Query: 1   MREMANNGMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFEKLIQKNEKLLKRLKKKD 60
           MR+MA+NG DFQVETDSLLGLSESGKLI SS +VLSILSS FE+ IQKNEKLLKRLKKKD
Sbjct: 1   MRKMADNGKDFQVETDSLLGLSESGKLIPSSSRVLSILSSTFERSIQKNEKLLKRLKKKD 60

Query: 61  SVTIFHSSRAPTMGIGQYIDRILKYTCCGTACLVVAYIYIERYLQKTDVYLTSLNVHRLL 120
           SVTIFH SRAPTM  GQYIDRI KYTCCGT CLVVAYIYIERYLQK   YLTSLNVHRLL
Sbjct: 61  SVTIFHGSRAPTMSTGQYIDRISKYTCCGTPCLVVAYIYIERYLQKMGAYLTSLNVHRLL 120

Query: 121 ITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFTTHCLQ 180
           ITSIMVAAKF DAGCYNN FYAKVGGVSTKEMNS+EIE LFNLDFRLHVTADVF  HCLQ
Sbjct: 121 ITSIMVAAKFNDAGCYNNAFYAKVGGVSTKEMNSMEIELLFNLDFRLHVTADVFRAHCLQ 180

Query: 181 LQKEVLGAENQVERRPGNKARTKCLPQITGYTCSAI 216
           LQKE LG ENQ++RRPGNK RT+CLPQI  YTC AI
Sbjct: 181 LQKEGLG-ENQIDRRPGNKTRTRCLPQIASYTCRAI 215

[Close]

BLAST of Cucsat.G19578 vs. ExPASy TrEMBL
Match: A0A0A0LJL5 (Cyclin OS=Cucumis sativus OX=3659 GN=Csa_2G021730 PE=3 SV=1)

HSP 1 Score: 421 bits (1082), Expect = 1.25e-148
Identity = 215/216 (99.54%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MREMANNGMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFEKLIQKNEKLLKRLKKKD 60
           MREMANNGMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFEKLIQKNEKLLKRLKKKD
Sbjct: 1   MREMANNGMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFEKLIQKNEKLLKRLKKKD 60

Query: 61  SVTIFHSSRAPTMGIGQYIDRILKYTCCGTACLVVAYIYIERYLQKTDVYLTSLNVHRLL 120
           SVTIFHSSRAPTMGIGQYIDRILKYTCCGTACLVVAYIYIERYLQKTDVYLTSLNVHRLL
Sbjct: 61  SVTIFHSSRAPTMGIGQYIDRILKYTCCGTACLVVAYIYIERYLQKTDVYLTSLNVHRLL 120

Query: 121 ITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFTTHCLQ 180
           ITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVF+THCLQ
Sbjct: 121 ITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQ 180

Query: 181 LQKEVLGAENQVERRPGNKARTKCLPQITGYTCSAI 216
           LQKEVLGAENQVERRPGNKARTKCLPQITGYTCSAI
Sbjct: 181 LQKEVLGAENQVERRPGNKARTKCLPQITGYTCSAI 216

[Close]

BLAST of Cucsat.G19578 vs. ExPASy TrEMBL
Match: A0A1S3C004 (cyclin-P3-1 OS=Cucumis melo OX=3656 GN=LOC103495057 PE=3 SV=1)

HSP 1 Score: 408 bits (1048), Expect = 1.90e-143
Identity = 207/216 (95.83%), Postives = 211/216 (97.69%), Query Frame = 0


Query: 1   MREMANNGMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFEKLIQKNEKLLKRLKKKD 60
           MREMANN MDFQVETDSLLGLSESGKLISSSPQVLSILSSVFE+ IQKNEKLLKRLKKKD
Sbjct: 1   MREMANNSMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFERSIQKNEKLLKRLKKKD 60

Query: 61  SVTIFHSSRAPTMGIGQYIDRILKYTCCGTACLVVAYIYIERYLQKTDVYLTSLNVHRLL 120
           +VTIFHSSRAPTMGIGQYIDRILKYTCCGTACL+VAYIYIERYLQK DVYLTSLNVHRLL
Sbjct: 61  NVTIFHSSRAPTMGIGQYIDRILKYTCCGTACLIVAYIYIERYLQKMDVYLTSLNVHRLL 120

Query: 121 ITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFTTHCLQ 180
           ITSIMVAAKF DAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVF+THCLQ
Sbjct: 121 ITSIMVAAKFTDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQ 180

Query: 181 LQKEVLGAENQVERRPGNKARTKCLPQITGYTCSAI 216
           LQKEVLG ENQVERRPGNKARTKCLPQITGYTCSAI
Sbjct: 181 LQKEVLGGENQVERRPGNKARTKCLPQITGYTCSAI 216

[Close]

BLAST of Cucsat.G19578 vs. ExPASy TrEMBL
Match: A6YTD1 (Cyclin-dependent kinase OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 408 bits (1048), Expect = 1.90e-143
Identity = 207/216 (95.83%), Postives = 211/216 (97.69%), Query Frame = 0


Query: 1   MREMANNGMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFEKLIQKNEKLLKRLKKKD 60
           MREMANN MDFQVETDSLLGLSESGKLISSSPQVLSILSSVFE+ IQKNEKLLKRLKKKD
Sbjct: 1   MREMANNSMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFERSIQKNEKLLKRLKKKD 60

Query: 61  SVTIFHSSRAPTMGIGQYIDRILKYTCCGTACLVVAYIYIERYLQKTDVYLTSLNVHRLL 120
           +VTIFHSSRAPTMGIGQYIDRILKYTCCGTACL+VAYIYIERYLQK DVYLTSLNVHRLL
Sbjct: 61  NVTIFHSSRAPTMGIGQYIDRILKYTCCGTACLIVAYIYIERYLQKMDVYLTSLNVHRLL 120

Query: 121 ITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFTTHCLQ 180
           ITSIMVAAKF DAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVF+THCLQ
Sbjct: 121 ITSIMVAAKFTDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQ 180

Query: 181 LQKEVLGAENQVERRPGNKARTKCLPQITGYTCSAI 216
           LQKEVLG ENQVERRPGNKARTKCLPQITGYTCSAI
Sbjct: 181 LQKEVLGGENQVERRPGNKARTKCLPQITGYTCSAI 216

[Close]

BLAST of Cucsat.G19578 vs. ExPASy TrEMBL
Match: A0A5A7TWJ7 (Cyclin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G00220 PE=3 SV=1)

HSP 1 Score: 402 bits (1033), Expect = 3.30e-141
Identity = 204/213 (95.77%), Postives = 208/213 (97.65%), Query Frame = 0


Query: 4   MANNGMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFEKLIQKNEKLLKRLKKKDSVT 63
           MANN MDFQVETDSLLGLSESGKLISSSPQVLSILSSVFE+ IQKNEKLLKRLKKKD+VT
Sbjct: 1   MANNSMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFERSIQKNEKLLKRLKKKDNVT 60

Query: 64  IFHSSRAPTMGIGQYIDRILKYTCCGTACLVVAYIYIERYLQKTDVYLTSLNVHRLLITS 123
           IFHSSRAPTMGIGQYIDRILKYTCCGTACL+VAYIYIERYLQK DVYLTSLNVHRLLITS
Sbjct: 61  IFHSSRAPTMGIGQYIDRILKYTCCGTACLIVAYIYIERYLQKMDVYLTSLNVHRLLITS 120

Query: 124 IMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFTTHCLQLQK 183
           IMVAAKF DAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVF+THCLQLQK
Sbjct: 121 IMVAAKFTDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQLQK 180

Query: 184 EVLGAENQVERRPGNKARTKCLPQITGYTCSAI 216
           EVLG ENQVERRPGNKARTKCLPQITGYTCSAI
Sbjct: 181 EVLGGENQVERRPGNKARTKCLPQITGYTCSAI 213

[Close]

BLAST of Cucsat.G19578 vs. ExPASy TrEMBL
Match: A0A6J1G2L7 (Cyclin OS=Cucurbita moschata OX=3662 GN=LOC111450231 PE=3 SV=1)

HSP 1 Score: 357 bits (917), Expect = 1.69e-123
Identity = 184/216 (85.19%), Postives = 192/216 (88.89%), Query Frame = 0


Query: 1   MREMANNGMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFEKLIQKNEKLLKRLKKKD 60
           MR+MA+NG DFQVETDSLLGLSESGKLI SS +VLSILSS FE+ IQKNEKLLKRLKKKD
Sbjct: 1   MRKMADNGKDFQVETDSLLGLSESGKLIPSSSRVLSILSSTFERSIQKNEKLLKRLKKKD 60

Query: 61  SVTIFHSSRAPTMGIGQYIDRILKYTCCGTACLVVAYIYIERYLQKTDVYLTSLNVHRLL 120
           SVTIFH SRAPTM  GQYIDRI KYTCCGT CLVVAYIYIERYLQK   YLTSLNVHRLL
Sbjct: 61  SVTIFHGSRAPTMSTGQYIDRISKYTCCGTPCLVVAYIYIERYLQKMGAYLTSLNVHRLL 120

Query: 121 ITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFTTHCLQ 180
           ITSIMVAAKF DAGCYNN FYAKVGGVSTKEMNS+EIE LFNLDFRLHVTADVF  HCLQ
Sbjct: 121 ITSIMVAAKFNDAGCYNNAFYAKVGGVSTKEMNSMEIELLFNLDFRLHVTADVFRAHCLQ 180

Query: 181 LQKEVLGAENQVERRPGNKARTKCLPQITGYTCSAI 216
           LQKE LG ENQ++RRPGNK RT+CLPQI  YTC AI
Sbjct: 181 LQKEGLG-ENQIDRRPGNKTRTRCLPQIASYTCRAI 215

The following BLAST results are available for this feature:

BLAST of Cucsat.G19578 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q75HV0	1.4e-44	54.76	Cyclin-P3-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCP3-1 PE=3 SV=1	[more]
Q8LB60	1.5e-38	49.40	Cyclin-U3-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU3-1 PE=1 SV=2	[more]
Q9LJ45	1.6e-35	46.55	Cyclin-U1-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU1-1 PE=1 SV=1	[more]
Q9LY16	1.7e-34	42.31	Cyclin-U4-2 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-2 PE=1 SV=1	[more]
O80513	1.1e-33	46.10	Cyclin-U4-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-1 PE=1 SV=1	[more]

BLAST of Cucsat.G19578 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139180.1	2.57e-148	99.54	cyclin-P3-1 isoform X1 [Cucumis sativus] >XP_011648813.1 cyclin-P3-1 isoform X1 ...	[more]
XP_008454704.1	3.93e-143	95.83	PREDICTED: cyclin-P3-1 [Cucumis melo] >XP_008454712.1 PREDICTED: cyclin-P3-1 [Cu...	[more]
KAA0047963.1	6.82e-141	95.77	cyclin-P3-1 [Cucumis melo var. makuwa] >TYK18312.1 cyclin-P3-1 [Cucumis melo var...	[more]
XP_038886918.1	4.51e-133	88.43	cyclin-P3-1 [Benincasa hispida] >XP_038886919.1 cyclin-P3-1 [Benincasa hispida] ...	[more]
XP_022946012.1	3.50e-123	85.19	cyclin-P3-1-like [Cucurbita moschata] >XP_022946013.1 cyclin-P3-1-like [Cucurbit...	[more]

BLAST of Cucsat.G19578 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LJL5	1.25e-148	99.54	Cyclin OS=Cucumis sativus OX=3659 GN=Csa_2G021730 PE=3 SV=1	[more]
A0A1S3C004	1.90e-143	95.83	cyclin-P3-1 OS=Cucumis melo OX=3656 GN=LOC103495057 PE=3 SV=1	[more]
A6YTD1	1.90e-143	95.83	Cyclin-dependent kinase OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1	[more]
A0A5A7TWJ7	3.30e-141	95.77	Cyclin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G00220 PE=3 SV...	[more]
A0A6J1G2L7	1.69e-123	85.19	Cyclin OS=Cucurbita moschata OX=3662 GN=LOC111450231 PE=3 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.472.10		coord: 28..210 e-value: 4.8E-51 score: 175.3
None	No IPR available	PANTHER	PTHR15615	UNCHARACTERIZED	coord: 5..199
None	No IPR available	PANTHER	PTHR15615:SF80	CYCLIN	coord: 5..199
IPR013922	Cyclin PHO80-like	PFAM	PF08613	Cyclin	coord: 54..167 e-value: 3.6E-33 score: 115.2
IPR012389	Cyclin P/U	PIRSF	PIRSF027110	PREG	coord: 11..210 e-value: 1.5E-66 score: 222.1
IPR036915	Cyclin-like superfamily	SUPERFAMILY	47954	Cyclin-like	coord: 78..168

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G19578.T5	Cucsat.G19578.T5	mRNA
Cucsat.G19578.T7	Cucsat.G19578.T7	mRNA
Cucsat.G19578.T2	Cucsat.G19578.T2	mRNA
Cucsat.G19578.T3	Cucsat.G19578.T3	mRNA
Cucsat.G19578.T15	Cucsat.G19578.T15	mRNA
Cucsat.G19578.T9	Cucsat.G19578.T9	mRNA
Cucsat.G19578.T12	Cucsat.G19578.T12	mRNA
Cucsat.G19578.T1	Cucsat.G19578.T1	mRNA
Cucsat.G19578.T13	Cucsat.G19578.T13	mRNA
Cucsat.G19578.T11	Cucsat.G19578.T11	mRNA
Cucsat.G19578.T14	Cucsat.G19578.T14	mRNA
Cucsat.G19578.T4	Cucsat.G19578.T4	mRNA
Cucsat.G19578.T6	Cucsat.G19578.T6	mRNA
Cucsat.G19578.T8	Cucsat.G19578.T8	mRNA
Cucsat.G19578.T10	Cucsat.G19578.T10	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000079	regulation of cyclin-dependent protein serine/threonine kinase activity
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0019901	protein kinase binding