Cucsat.G19511.T10 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TACTTAAAATCATTCAATAAGATATGTGAATTTAAAGATCTAGACGTTTCATGATAATATCATTTGATAGACATTCACGATACTTTGTTTTACGATTTCTCTTTGTTACATCCAACCACGCACCTCAACACTAATAATTTCTTCCATCACCACCTCCCCTAGAAGAGGAAAGGAAAGGAAAACACACAAGGGTTTCTTTTCCTCTATTTCTTTAATGCAGATCCGACATTGAAATTGTTAAATGGTCCATTCATTAGCATCATTTTAACCTACATTTCTTCATTTCTTCATTTCCAAGGCTTGTATTGTATTACCATATATATATATAAACATTTCAAGTATTTCTTTTCATCACTCTTCATATTCTTCCTTTCTTTACACTCTGTCTGCTTCCCTTTATTAATGGCCAGCAAGTAGCTCTGAAATCGCTTGAAGTTTCATGGCTTCTTCCTCTTCTTCTTCTGTCTTTGGTTATTTCGCCATTTGAGAAAGTTTTTAGAAATGGGTTTTCGTTTTTGGCTTCTGCGGTTTTGTTTTTGGGTCTGTTTCTTCTTTCTCTGTTGTGGTTCAGTGAACTCAGAAGGGTTTTTGAGAGGGAGGGTTTTGATTGACGGCAAATCCGCCATTGGACGTATTGATGAAGACTTTGTTTGTGCTACGCTCGATTGGTGGCCTCCTGAGAAATGCGATTACGGAACTTGCAGTTGGGGCCAAGCTTCTCTGTTGAATCTGGTATTTGTTTTTTCTTTTCTTTCTTTTAGATTCTAATCATTTCCAAACTCATTAATGGCGATTTACTTTTCTTATGAATTACGAGAGTTCATAAATTTTGGCATCTGGGTTTCATTATTTGATATTCTTCTTTAAGTTTTCTTTATGGGTTTTTAGAGTATTTATTGCTAAAGAAAAGTGAGAATCCTTTCATCTTTTCGAACAGTCTCACTCCTCAGTTATGCATTTGGAAGATAACAAAACAAAGAAAACTCGACATTAATTGGTTTGGAGGAGATATCAAAACAAAGAAAGTTCGAAGATTAATTTTGAGTATAACTATTGGTTAGAAAATTGAACCTCTAATCTCTATCTAACAGGAGGTCATGTCAATACTACTAAATAGAGTTCATTCCGGCAAAAACTCGAAAATCAATTAAATTTCAAAAGTCTCTTAAATTATACATTTCGTTTACTTAGGTCTCGTTTGGAAAGTAGATAGCAGAAAGAAAAAAAAAAAAACCCCAATTAATTGGATTTTAAATTTGGAAGTATGTTTACAATTATTTAATGTCTTTTCTACTAGGTTCTATTGACTAAAGAATAATAATAGTTATGAGGTCACATCTACTATTAAATATACTTTCCTATAATCTATCTAGTGCTATACTATCTGAAATATTTAAATTTGTTCTGATTTCATTTTCAACTGCAGGACCTGGGCAACAACATTCTATTAAATGCAGTCAAAGGTTTGAATTCCTTTAGCTCCTGGACTGTTTTGGCTTACAGTTTTAATGAATCTAGCTTTATAAAGAAGTAAGAAAGTCTTTATGATCTGCAAAAGAATGAAATAAACCCTAGGCTTATCTAATCTATGATGATTTGTTGAAGCTAATATTTAATATCTATTATAAAAGATAGGTTTCATAGGTTCAATTTATGTGTCCAAACATAGGTTTATATCATACCTCAAGTAATTCAACGTTTTAGGGGAGAAAGATCAAAAAAGTGTTAAGAGTTGTAGAACGGAACCTTAAAGTTTGGTCCTCGGTGAGATTTCATGTTTCTTTTTTATACTTCGATTTTGAGGACTTTTTCTAATTACTCTCTAGGCAACATCATACGTAGTTGAACCTCCTTTTTCTAGTGGGGTTTTTGTGGGCTCTTCTTTCATTTTTTTTTTTTCCTGAATGAAAGAAGTTGTTTCTATTCGGGAAAAAATCATTCTACCTATGAAGTATTCTCTATATATTTGAATGTGAAAGTTAAAACTAATGTCTCTTCATGAATGGCGCAGAATTTAAACCCCTAAAGCTTAGATTGGGTGGTACTTTGCAAGATAAGATCATATATGATACTGAAGATCACCAGGAGCCATGCATTTATCTTTCAAAAAACACCTCAGAGTTATTTGGGTTCAGTCAAGGCTGCTTGCCTACTAACAGATGGGACCAACTAAATGACTTCTTCAAGAAAGGAGGGTAATAAAAAATTCATCCCATTTTCCTCGTATGAAGTTAGATTTCTCAAAAGTTGAATGCTAAAGTTGTGTAATCTTATTCAGAGCTAAGATTATCTTCGGATTAAATGCTCTCAATGGACGACAAATTGCAGCAAATGGGTGTTCTGTTGGAGCTTGGAATTACACAAATGCTGAAATGTTAATTCGTTATACTGTAAAAAAAAACTACACCATCCATGGTTGGGAGCTTGGTAAGAATTGCCAATTGTTTTCCTAATGAACAATTCAAAACCCCGAGATATGTTGGTCTACAACAATGAATTTTGGAGAGTAATTGTTCTTGTTATTTGATTTTTTCTTATGCTCAGGAAATGAATTGAGTGGGAATGGAGTTGGGACAAGAATTTTAGCAGAACAGTATGCTTCTGATACAATTGTTCTTCAAAACATGGTCCAAAGTATCTACAAGGATATCGAACCGAAACCATTAATCATAGCACCTGGAGGATTCTTTGATGAAAATTGGTTCAAAGAATTCGTTGGCAAAACTACCCCATCACTAGACGTTGTCACACACCATATATACAATCTAGGACCAGGTATCATTCATTGGCCTAGTAATACTTACATGAAGTTTCGAAAAGCAGGTAGACATTGAAGCCTTTTCTTATTAACAGGAGTCGATGAGCATCTTGTTGAAAAGATTCTTGATCCGTCCTATCTTGATGGCATGGTTGATACATTTAACAAGCTCCATGAGATCCTCAAAAACTCTCCAACTTCAGCTAAAGCGTGGGTTGGGGAATCAGGAGGGGCTTACAACAGTGGCCATAACCTGGTCACAAATGCATTCGTCTTTAGTTTCTGGTAATTTAGACTGTGAAAGACATTCATATTTGGTTCTTTCAAGACATCCATTACAAATAGAACTCTCTCATTGATGTGTAATTTATTCAGGTACTTGGACCAGCTCGGTATGGCAGCTGCTTATGATACAAAAACATACTGCAGGCAGACTTTGATTGGTGGAAACTACGGCTTACTAAACACGACAACCTTTGAACCGAATCCAGACTATTACAGGTGAAAGATTAGGTCAATATTTCTGACCTACTCCACTGCTATTAGACAATTATCTAACAATCAGCTTGCTTGTTTTTTGTTTCTTTCTTCGTTTCAGTGCACTCTTATGGCATCGCTTGATGGGAAGAAATGTTCTGTCCACGGGCTTTAATGGGACAGAGAAAATACGAGCCTATGCACATTGTTCTAAGCAATCTGTAAGTAGCAGTATATACCATGACAACCTTAAATTTGGTTTTTCTGCCTATTGCTTAAGTAAATGAAATAAACAGCTGAAAGCTAAAACTAGAAATAAAGAAATGCCACCAGTTTCTCAACTCTGATTTAACTCTCAATCTTACAGAAAGGAATCACATTACTATTGCTCAACCTAGATGGTAACAATACAGTTCATGCTGGGATTGCATTCAACAGAACTACAGCGTTGCACCATAAACACAGATCCAATAAGCATAAATCAAATATTGTTCGGATACCTCGACCTCGTGGTCTTGAAGGCGAAGCCTTCAGAGAGGAATATCATTTAACAGCCAAGGATGGAAACCTGCATAGTCAAACAGTGCTGCTAAATGGAAACATTTTGTCTGTAAATTCATCAGGGAACATACCTCCATTGGAACCTCAGCATGTAAATTCATCTGAACCAATAATGGTGGCTCCCTTTTCAATTGTATTCATTCACATACCAAATATCATTCTCCCTGCTTGCAGATAGGATAGGTTGAATGTATGGAACTGAAAATCGGTTCCAGATTGGTTATTTTCTAATAAGAGAAAACAATTGTAACATTTGGTTCATTTTTTTCAAGGTGAAAAAATAGCAAGAGTCTCTTTGAATCAACATTGACCGACGGAAAATCAATCCGTGGATGTAAGTAGCACCATAAGCAGAAGATGCAAATTTTACAGAATATATGCAACTTTCGCAGGATCACTCTGACTAACAATGAGAAAACAAAATCTCTACATGATCAGTAATACTGCTTCTTTGTGGGGAATTA ATGGGTTTTCGTTTTTGGCTTCTGCGGTTTTGTTTTTGGGTCTGTTTCTTCTTTCTCTGTTGTGGTTCAGTGAACTCAGAAGGGTTTTTGAGAGGGAGGGTTTTGATTGACGGCAAATCCGCCATTGGACGTATTGATGAAGACTTTGTTTGTGCTACGCTCGATTGGTGGCCTCCTGAGAAATGCGATTACGGAACTTGCAGTTGGGGCCAAGCTTCTCTGTTGAATCTGGACCTGGGCAACAACATTCTATTAAATGCAGTCAAAGAATTTAAACCCCTAAAGCTTAGATTGGGTGGTACTTTGCAAGATAAGATCATATATGATACTGAAGATCACCAGGAGCCATGCATTTATCTTTCAAAAAACACCTCAGAGTTATTTGGGTTCAGTCAAGGCTGCTTGCCTACTAACAGATGGGACCAACTAAATGACTTCTTCAAGAAAGGAGGAGCTAAGATTATCTTCGGATTAAATGCTCTCAATGGACGACAAATTGCAGCAAATGGGTGTTCTGTTGGAGCTTGGAATTACACAAATGCTGAAATGTTAATTCGTTATACTGTAAAAAAAAACTACACCATCCATGGTTGGGAGCTTGGAAATGAATTGAGTGGGAATGGAGTTGGGACAAGAATTTTAGCAGAACAGTATGCTTCTGATACAATTGTTCTTCAAAACATGGTCCAAAGTATCTACAAGGATATCGAACCGAAACCATTAATCATAGCACCTGGAGGATTCTTTGATGAAAATTGGTTCAAAGAATTCGTTGGCAAAACTACCCCATCACTAGACGTTGTCACACACCATATATACAATCTAGGACCAGGTATCATTCATTGGCCTAGTAATACTTACATGAAGTTTCGAAAAGCAGGTAGACATTGA MGFRFWLLRFCFWVCFFFLCCGSVNSEGFLRGRVLIDGKSAIGRIDEDFVCATLDWWPPEKCDYGTCSWGQASLLNLDLGNNILLNAVKEFKPLKLRLGGTLQDKIIYDTEDHQEPCIYLSKNTSELFGFSQGCLPTNRWDQLNDFFKKGGAKIIFGLNALNGRQIAANGCSVGAWNYTNAEMLIRYTVKKNYTIHGWELGNELSGNGVGTRILAEQYASDTIVLQNMVQSIYKDIEPKPLIIAPGGFFDENWFKEFVGKTTPSLDVVTHHIYNLGPGIIHWPSNTYMKFRKAGRH Homology
BLAST of Cucsat.G19511.T10 vs. ExPASy Swiss-Prot
Match: Q9FZP1 (Heparanase-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=At5g34940 PE=2 SV=2) HSP 1 Score: 365.5 bits (937), Expect = 5.5e-100 Identity = 165/279 (59.14%), Postives = 211/279 (75.63%), Query Frame = 0
BLAST of Cucsat.G19511.T10 vs. ExPASy Swiss-Prot
Match: Q8L608 (Heparanase-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At5g61250 PE=2 SV=1) HSP 1 Score: 292.0 bits (746), Expect = 7.8e-78 Identity = 125/249 (50.20%), Postives = 170/249 (68.27%), Query Frame = 0
BLAST of Cucsat.G19511.T10 vs. ExPASy Swiss-Prot
Match: Q9FF10 (Heparanase-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At5g07830 PE=2 SV=1) HSP 1 Score: 270.4 bits (690), Expect = 2.4e-71 Identity = 128/280 (45.71%), Postives = 178/280 (63.57%), Query Frame = 0
BLAST of Cucsat.G19511.T10 vs. ExPASy Swiss-Prot
Match: Q9LRC8 (Baicalin-beta-D-glucuronidase OS=Scutellaria baicalensis OX=65409 GN=SGUS PE=1 SV=1) HSP 1 Score: 264.2 bits (674), Expect = 1.7e-69 Identity = 132/292 (45.21%), Postives = 178/292 (60.96%), Query Frame = 0
BLAST of Cucsat.G19511.T10 vs. NCBI nr
Match: XP_004139281.1 (heparanase-like protein 3 [Cucumis sativus] >KAE8651538.1 hypothetical protein Csa_019474 [Cucumis sativus]) HSP 1 Score: 592 bits (1527), Expect = 1.19e-209 Identity = 278/279 (99.64%), Postives = 279/279 (100.00%), Query Frame = 0
BLAST of Cucsat.G19511.T10 vs. NCBI nr
Match: XP_008457259.1 (PREDICTED: LOW QUALITY PROTEIN: heparanase-like protein 3 [Cucumis melo]) HSP 1 Score: 573 bits (1477), Expect = 4.57e-202 Identity = 264/279 (94.62%), Postives = 274/279 (98.21%), Query Frame = 0
BLAST of Cucsat.G19511.T10 vs. NCBI nr
Match: XP_038891040.1 (heparanase-like protein 3 isoform X1 [Benincasa hispida]) HSP 1 Score: 541 bits (1395), Expect = 1.37e-189 Identity = 255/279 (91.40%), Postives = 264/279 (94.62%), Query Frame = 0
BLAST of Cucsat.G19511.T10 vs. NCBI nr
Match: XP_023537510.1 (heparanase-like protein 3 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023537511.1 heparanase-like protein 3 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 513 bits (1322), Expect = 2.11e-178 Identity = 240/286 (83.92%), Postives = 262/286 (91.61%), Query Frame = 0
BLAST of Cucsat.G19511.T10 vs. NCBI nr
Match: KAA0063515.1 (heparanase-like protein 3 [Cucumis melo var. makuwa] >TYJ97842.1 heparanase-like protein 3 [Cucumis melo var. makuwa]) HSP 1 Score: 513 bits (1321), Expect = 2.99e-178 Identity = 244/280 (87.14%), Postives = 253/280 (90.36%), Query Frame = 0
BLAST of Cucsat.G19511.T10 vs. ExPASy TrEMBL
Match: A0A1S3C565 (LOW QUALITY PROTEIN: heparanase-like protein 3 OS=Cucumis melo OX=3656 GN=LOC103496979 PE=3 SV=1) HSP 1 Score: 573 bits (1477), Expect = 2.21e-202 Identity = 264/279 (94.62%), Postives = 274/279 (98.21%), Query Frame = 0
BLAST of Cucsat.G19511.T10 vs. ExPASy TrEMBL
Match: A0A5A7VC89 (Heparanase-like protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00540 PE=3 SV=1) HSP 1 Score: 513 bits (1321), Expect = 1.45e-178 Identity = 244/280 (87.14%), Postives = 253/280 (90.36%), Query Frame = 0
BLAST of Cucsat.G19511.T10 vs. ExPASy TrEMBL
Match: A0A6J1HPC5 (heparanase-like protein 3 OS=Cucurbita maxima OX=3661 GN=LOC111465495 PE=3 SV=1) HSP 1 Score: 509 bits (1312), Expect = 3.15e-177 Identity = 238/286 (83.22%), Postives = 261/286 (91.26%), Query Frame = 0
BLAST of Cucsat.G19511.T10 vs. ExPASy TrEMBL
Match: A0A6J1FD96 (heparanase-like protein 3 OS=Cucurbita moschata OX=3662 GN=LOC111444334 PE=3 SV=1) HSP 1 Score: 505 bits (1301), Expect = 1.57e-175 Identity = 235/286 (82.17%), Postives = 259/286 (90.56%), Query Frame = 0
BLAST of Cucsat.G19511.T10 vs. ExPASy TrEMBL
Match: A0A6J1G2Y8 (heparanase-like protein 3 OS=Cucurbita moschata OX=3662 GN=LOC111450316 PE=3 SV=1) HSP 1 Score: 492 bits (1266), Expect = 3.67e-170 Identity = 227/284 (79.93%), Postives = 249/284 (87.68%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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