Cucsat.G19237.T18 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GACGAGTGACGAAAGAATTCTGAAAATCCTTCTAACCACAAAAATATATGAATCAAAAAAAACAAAAACAAATTGGACATATCCCCATAAAACTATATCTCACTTTTAAAAAAGAAAAAGGAACCCAAAACAACATCCATTCTTAGTTGAGTTTTTGGAAAACACACCTTTGCTTCAGGTTCCAAATTCCAATCACACTCACAAATCTGCTTCAGCTTAAATTTTAAGCTTTTACTCCTTTTTTTTTTTTTCCTTTCTGTTCTCCATCAACAAGAATCTTACCACAATTTCACGTAATTTAGCATCTTAGAACACTCTTCAACCTATCATCTTTATAAGCACCGTATCCTCCTCTAGTTCATCAACTAAATCGTCCCACCCCCCTTGCCTTGCTGCTCCTACAAATCCGTTGCTGCCCTCGCCCCACCATATTCAAATAGGTTCAGTTAGTTTGATTCATTTGTTTATTTGATTTAGCTGTTTGTCTATTGTTTTGAATGGCGAAAGTTTTGGGATTCTATACCCATGCATGAATTATCAATTAGAGATTTGCTGATTGCTATACAATTGTGTGCAGAAATTATCATTATCGTGGTCATATTTTGGATACCATTGAGCAAAACAAGTAAGTTGGTTTCTCATCTATTGTTGTTGTGTCCTCCTAGATTTTAACGCACTAAATGTACTGAAATACGTACTCTCCTTCAATAATTTTCTTACAATCTAGTTAAGTTAACTAGAGAATTAGTTTTACCGTTCAAGTGAGTTTCAGTTAGTTTAACACTAATGCAATAGTACTAAAAATATAAGTAAATTTGAGGTTAAACATGTTTTTAGTTTCTAAACTTTAATTAAAATAACATAATTTAGTTTTTGAATTTAATTAGTTCATATACTTAAATTTTGTTAGAATTTAGAGTTTAGAAATTTTAGTAATTTAGTCAATGTAATTTAATCTCCAATATTAAAAAAAAAAATGGTCAATTTTTATTATTTTATGATATAGAATTTGTATTTTAAAAAAATATTGAGTCTCTAGCTAATAGTTCATTTGGGGAAGAAATCTAATTAAACCTTAATACTAGTTTCTATTGAAAGGAATTGAATGGTTACAAAATTTAAAGTAGAATGTAGCAACTGTTAGGGTTTAATTGTATCAAAATTAAAAATATATGAACAGAAATCAGAATTGTTATAAAAGTAAAGTCATGGGGGAGTTCTTGTTTAAAGTATTTTTTTAACACTGCTTTTTAAACTTTCATGGGGTTGGTTGTAAAAGGGTCCAATACAGTAGGTGAGGGAGGTTGATTGAGGTTTATTTTACAAATAAATAAGTTTTGAATTAGTTTGAAATCCTAAAATTTGGAATTCTTAGAGAGAGCATCCAAACCATATTTACATATTTGGCTTCTAACAATTTGATGCAGAAAAAGAAAAAAAAATATATATTGGGATTCTGATTACTTTTGTACACTTTTAGTGTCTTCAAAAGATATTTCTTATTTTTTTCACTAAATAAGAAATTCTCTTTCTTTCGTTCTCTCTGTTTCCTGTTATGCAAATATAAAATCATTTTAGTTAAAATATTGTTTTGATGATTTAGTTTTAGTTTTTAAAATAGAAAATTGCATTAAATCACATCAAAAATGTAGAAAAAAACACTTCATGATACTTTTTTTTTTCTACTTTTTTGCAAACTCTTCCTTTATAATTATCTAATTTTATTTGTTTGAATTATAATAGATCTTATATCTAATGCATCAAAGTCAAAATTTAATTAAATAATAGTGATTTCCATGCCATCCAAAAAACATAAACTAAATTGTTTTACATCATAAAACTATTCAAAATACATACAAATATAGCAAAATTTTATAATTTATCCATGATAGACATTTATTAGTATCTATCGACAATAAATAATAGTAATATATCAATATCTATCAACTTATATCAGTAATAACAAAAAAGAAAAAATGTAACTAAGGCATAATAAACAAATTTTGGAAAAAAATTTAGATTTATTAAATATATAGGAGCTAAAATTGAACCAAAATAACGATTTAACGAATATTTTTCAACGAGACTTCAAGTTGTATGATTCCCACGTGATGTTGAATCTATCTTGGATAATGTCAAATCTCTACTTTGCATAACCATTGTATTGGTAGAACCTCTATCGTAAATATAACAAAACTTTAAATCTAATCTTGAAAGTTTATTGGTGATAAACTATATAATAGAAATTTTATATATAGTTTAGTTTATGTATGTTAGTGGATAGATTTTGTTATGTTTTAGTTTCATAAAAGTATGAGTGAATATAATAGGAGGCAGTATTATAGAATCTGACTCGTAAATGTTGCTATAGTTGCATTCTTAAAATTATTATTAGCGTTGAAAATGTTTGTTTATGCAATTGCCTCAATACTTTCTTTGTTTGCATATTCACTTTCTATTTATATATTAGAAAAATAAGTTAAAGACTTTTAAAAACTAAAAATATAAATGTGAAGAACTGTTTTGTTCAATAGACATAATTCAAATGTTTTTGGATGGGGAGATAAAGGAAGAAACAAACATAAATTTCATTGGTTTAGAACTAAAAGAAAATGGTTATTAGCACAAGGGCCAACTTTGTAATTTACTGATATTCATCATCCTTTTCTTGTGGGGGTAACAATCAAACAAACAAATCACAAATCTCCCACTCCTTAAATTTCTTCTCTTTATTCTAAAATCTCATCTAATATTAAACTATTTATATAACTCCAATTTCTGGGTTCTTACGCTTGAAACTACGAATATTGTTTTGATATATAGCTGCTTATTCAAATGAGGAACTCCATCATAGAAGAAGTACACGAAATTGAGACTAATGAAAGTAAAGAAGAAGACAAGACTCAAAATGAAGCAGAGGATGTTAAGAAAATTGCACCTTGGACAAGACAGATTACAATCCGTGGTGTAATTGCAAGCATAGCAATAGGAATTATGTACAGTGTAATAGTGATGAAGCTTAATCTTACAACAGGTTTGGTACCAAATTTGAACGTTTCAGTTGCTCTTATTGCATTTGTGTTTATAAAGACATGGACTCTGTTGCTTGAGAAAGCTGGATTTGTATGCACTCCCTTTACACCACAGGAAAACACCGTCATTCAGACTTGTGCTGTTGCTTGTTATAGCATTGCTGTTGGAGGTGAGATAGCTATTGAAATGCTTTGTCGTTTTTTCTGTTTGAAATGTCTTCAATCTGCTGTCTGACACAGTCCACAAGTAGGAGATCTATGGATGTAGTTAACATACGTATACGATTAATGAACCACATAGTCTCTTTGTTCATCTCTCTACTGATCTTTATGTTTTTTGACAGCTGTGTTTGATGATTTTGTGTAGGTGGCTTTGGATCCTACTTGTTTGCTTTGAGCAGGAAGACGTACGAGCAAGCGGGTGTCAACATGGAAGGAAATGCTCCTGGAAGCACCAAAGAACCAGGAATTGGTTGGATCACTGGCTTCCTCTCTGTTAGTAGTTTTGTGGGACTTCTTGCCTTGGTTCCGCTTAGAAAGGTATATTTCTTTCTCATAGAAGTTATGTGTTTACTAAGTGAATCTAAATTTGTTTGTGTACATGTCACACACTCAATGTTATAAACAAACCGAGAAACAAGATGATTAATACAACAGATATAATAAAGACAAATAAACACATAGATTTGTAACTCCATGTGGTGCAAAGTTACTTACGTTTGGGATAGTGTGCTCAGTAGAAAGGAACTTCGCTAATGAAGTTTCACAATTACAATATAGTACTATAGGTAAAAAAATATTTACAAATGACTCACGAATACTCAACTCTTAGTAAAAACTTACGCTATCCATAAGCTTGAGATTCACTGGCTATTCACTGGCTACGAGAAATGCTCTACAGTTGACAGGAGTTTGAGTTCTCCTCAAACTAACTTACATAGGTTGCTCTTATGTATGAGCTCCTCTCAACTTCTCGCCGACCGAGATAAACAATTCAACTTAGGTAACAAAATGCACTCCAAAAACACACAATATGGCCAACCCTAAAAAGGAAGCAACATCTCAATATAGGTTGCTTAAAGACATTCTGAAGGTAAAAAATCATCTCCACGAAACAAAATGCTTTTAAAAGAAATTTCCAATCATCTTGCAGTAACATGATGGAGTTGAGAACTCTAGTTGGTTTTATTAATGGTGTCTTGAATTGTATTGCAGATCATGATACTAGACTATAAATTGACTTATCCAAGTGGAACTGCAACAGCTGTTCTGATTAATGGTTTCCACACACCGAAAGGAGACAAAGCAGCAAAGTATGCAATCCCTTGCTAGTTCTTCTTCATTTAAAACGAAATCGTGTGTTGAACACTTGATTTGAAAGCAACTCTAAAGAAAATTCTTCTATTCATTTCTTTGCCAGGAAACAAGTTCATGGATTCATGAAATACTTTTCATTCAGTTTTTTCTGGGCTCTATTCCAATGGTTTTATTCTGGAGGAGAAAAATGTGGGTTCTCACAGTTTCCAACATTTGGAATAAAAGCTTGGAAAGATTCGTGGGTGCTCAAAATCTTTCCTATTTTCATCTTCTTTGCCATTCTTGAACTTGGTTGGTTTCTTTCATTAAACTGATAGGCATTTATCTTTTGTAGGTTTTACTTTGATTTCAGCTTGACTTATATCGGAGCAGGGATGATATGCCCCCATCTTGTGAACTTGTCATTGCTTCTTGGTGCTGTTCTTTCTTGGGGCGTTATGTGGCCTTTAATGAAGGAACTTAAAGGGGAATGGTATCCTGGATCTCTTCCAGAGAGCAGTATGAAAAGCCTCAATGGTTACAAGGTATAAAATTGGAAACAGGCCATGAAATTTGTAGGGAATTATGTTTTATTTTATTTTGTTAGGTGTGAAATGTCTTAAATTTATTATCTAACCCTTTAAAAAACAAAGCACTGGTTTTCGTTGCTCCGTTAGCAAGTCAAGGTCTAGGGGCACTGCGCTTTAGTGGGACTCAGAGGCAACACTGTCAAAGCCTAATTGTATTCACACACATATATATAGTGTTCGCGATTTTGGCCATGGTTCAGAAGAGTGCGCTATATAAACTTTTTCACTGTGGTGCCACCTCTTAGATCTTTTTATTATTATTTTTTAAACAAAAATAACACTCTTTTTACGATGAAATGAAATCAGATTCATGTCAGTTTTCTTACACATTGTTTCGTGCAGGTATTTATATCAATTGCTTTGATACTTGGAGATGGGCTTTACCATTTCCTCAAAATTCTATATTTCACTGGTTCAAACATGTACGCAAAAGCAACCAACAAGAAGTTGAAAACATGTAAATTGATGATTCCTGATGTGCCATTCCCAAGTTTTCTTTCATTCATTATGACATGATATTTATATGGATGCAGTCCCTGATGATTCAGTCCCAACTTTCGACGATCATCGACGAAACGAAGTGTTCTTAAGAGACGGTATTCCGGTATGGGTGGCAATCACAGGGTACATCTTCTTCTCCATTGTCTCTATCATTGTAATCCCAATCATGTTCTCAGAGGTCAAATGGTACTACATAGTTGTGGCCTATACTTTGGCACCATCTCTTAGCTTTTGCAATGCCTATGGTGCTGGTCTAACTGACATGAATATGGCTTATAACTATGGGAAAGTGGCTCTGTTTGTGCTTGCTGCTATGGCTGGTAAAAATGATGGTGTAGTTGCTGGACTTGTTGGTTGTGGTTTGATCAAGTCTATTGTTTCCATTTCCTCTGATTTGATGCATGATTTCAAAACTGGCCATCTTACACTTACATCTCCAAGATCCATGCTTTTAAGCCAAGCTATTGGTACAGCCTTAGGCTGCATTGTAGCTCCTATCACATTTTATATGTTCTACAAAGCATTTGATCTCGCCAACCCAAATGGTGAGTACAAGGTCCCGTATGCAATCATATACCGAAACATGGCTATCTTAGGAGTTGAAGGCTTCTCAGCTTTGCCTCAGCATTGCTTGCAGCTATGTTATGGATTCTTTAGCTTTGCCATAGTAGCTAACTTGTTGAGAGATCTTACACTTGAGAAATTTGGGAAATGGATCCCATTGCCAATGGTCATGGCTGTGCCTTTCCTCGTCGGTGCTTATTTTGCAATCGATATGTGCATGGGGAGCTTGATCGTGTTCGTGTGGCATTATCTAAATCGTGAAAAGGCTGGATTGATGGTTCCGGCTGTTGCGTCTGGTTTGATATGTGGAGAAGGATTATGGATTCTCCCTTCTTCAATTCTTGCTTTGGCTAAGATTCATCCCCCAATTTGTATGAGTTTTTTTTCTTCTAGTAAAAGTTAAATCTAGAAAGTGCTCTTAAGTATAGAATCTTATGCATGTTCAAGATGTAGAGAAGCTGCAATCTCTTCATAAATTTTAGAATGCAGCAAGTTTCAATATAGTGTTACTGTATAAGTTAAAGGTTAATAGAATACTTTGAGAGATTGAATCAAACTACATCATTAAAACATATTCTTCACCGTAATATTGGATGCATTCAGAAATTTTAAGACGTTAACTCATTGTGGAAACTTTCAGCTACTATGGTA ATGTACGCAAAAGCAACCAACAAGAAGTTGAAAACATTCCCTGATGATTCAGTCCCAACTTTCGACGATCATCGACGAAACGAAGTGTTCTTAAGAGACGGTATTCCGGTATGGGTGGCAATCACAGGGTACATCTTCTTCTCCATTGTCTCTATCATTGTAATCCCAATCATGTTCTCAGAGGTCAAATGGTACTACATAGTTGTGGCCTATACTTTGGCACCATCTCTTAGCTTTTGCAATGCCTATGGTGCTGGTCTAACTGACATGAATATGGCTTATAACTATGGGAAAGTGGCTCTGTTTGTGCTTGCTGCTATGGCTGGTAAAAATGATGGTGTAGTTGCTGGACTTGTTGGTTGTGGTTTGATCAAGTCTATTGTTTCCATTTCCTCTGATTTGATGCATGATTTCAAAACTGGCCATCTTACACTTACATCTCCAAGATCCATGCTTTTAAGCCAAGCTATTGGTACAGCCTTAGGCTGCATTGTAGCTCCTATCACATTTTATATGTTCTACAAAGCATTTGATCTCGCCAACCCAAATGGTGAGTACAAGGTCCCGTATGCAATCATATACCGAAACATGGCTATCTTAGGAGTTGAAGGCTTCTCAGCTTTGCCTCAGCATTGCTTGCAGCTATGTTATGGATTCTTTAGCTTTGCCATAGTAGCTAACTTGTTGAGAGATCTTACACTTGAGAAATTTGGGAAATGGATCCCATTGCCAATGGTCATGGCTGTGCCTTTCCTCGTCGGTGCTTATTTTGCAATCGATATGTGCATGGGGAGCTTGATCGTGTTCGTGTGGCATTATCTAAATCGTGAAAAGGCTGGATTGATGGTTCCGGCTGTTGCGTCTGGTTTGATATGTGGAGAAGGATTATGGATTCTCCCTTCTTCAATTCTTGCTTTGGCTAAGATTCATCCCCCAATTTGTATGAGTTTTTTTTCTTCTAGTAAAAGTTAA MYAKATNKKLKTFPDDSVPTFDDHRRNEVFLRDGIPVWVAITGYIFFSIVSIIVIPIMFSEVKWYYIVVAYTLAPSLSFCNAYGAGLTDMNMAYNYGKVALFVLAAMAGKNDGVVAGLVGCGLIKSIVSISSDLMHDFKTGHLTLTSPRSMLLSQAIGTALGCIVAPITFYMFYKAFDLANPNGEYKVPYAIIYRNMAILGVEGFSALPQHCLQLCYGFFSFAIVANLLRDLTLEKFGKWIPLPMVMAVPFLVGAYFAIDMCMGSLIVFVWHYLNREKAGLMVPAVASGLICGEGLWILPSSILALAKIHPPICMSFFSSSKS Homology
BLAST of Cucsat.G19237.T18 vs. ExPASy Swiss-Prot
Match: Q2EF88 (Metal-nicotianamine transporter YSL3 OS=Arabidopsis thaliana OX=3702 GN=YSL3 PE=2 SV=1) HSP 1 Score: 492.3 bits (1266), Expect = 4.3e-138 Identity = 241/324 (74.38%), Postives = 275/324 (84.88%), Query Frame = 0
BLAST of Cucsat.G19237.T18 vs. ExPASy Swiss-Prot
Match: Q6R3K9 (Metal-nicotianamine transporter YSL2 OS=Arabidopsis thaliana OX=3702 GN=YSL2 PE=1 SV=1) HSP 1 Score: 481.9 bits (1239), Expect = 5.8e-135 Identity = 228/305 (74.75%), Postives = 273/305 (89.51%), Query Frame = 0
BLAST of Cucsat.G19237.T18 vs. ExPASy Swiss-Prot
Match: Q7XUJ2 (Probable metal-nicotianamine transporter YSL9 OS=Oryza sativa subsp. japonica OX=39947 GN=YSL9 PE=2 SV=2) HSP 1 Score: 470.3 bits (1209), Expect = 1.7e-131 Identity = 214/306 (69.93%), Postives = 265/306 (86.60%), Query Frame = 0
BLAST of Cucsat.G19237.T18 vs. ExPASy Swiss-Prot
Match: Q7XN54 (Probable metal-nicotianamine transporter YSL16 OS=Oryza sativa subsp. japonica OX=39947 GN=YSL16 PE=2 SV=2) HSP 1 Score: 455.7 bits (1171), Expect = 4.4e-127 Identity = 206/303 (67.99%), Postives = 257/303 (84.82%), Query Frame = 0
BLAST of Cucsat.G19237.T18 vs. ExPASy Swiss-Prot
Match: Q6R3L0 (Metal-nicotianamine transporter YSL1 OS=Arabidopsis thaliana OX=3702 GN=YSL1 PE=2 SV=2) HSP 1 Score: 439.9 bits (1130), Expect = 2.5e-122 Identity = 206/319 (64.58%), Postives = 261/319 (81.82%), Query Frame = 0
BLAST of Cucsat.G19237.T18 vs. NCBI nr
Match: XP_031736196.1 (metal-nicotianamine transporter YSL3 isoform X3 [Cucumis sativus]) HSP 1 Score: 642 bits (1656), Expect = 5.55e-229 Identity = 323/323 (100.00%), Postives = 323/323 (100.00%), Query Frame = 0
BLAST of Cucsat.G19237.T18 vs. NCBI nr
Match: XP_031736195.1 (metal-nicotianamine transporter YSL3 isoform X2 [Cucumis sativus] >KAE8653095.1 hypothetical protein Csa_019934 [Cucumis sativus]) HSP 1 Score: 642 bits (1656), Expect = 3.24e-227 Identity = 323/323 (100.00%), Postives = 323/323 (100.00%), Query Frame = 0
BLAST of Cucsat.G19237.T18 vs. NCBI nr
Match: XP_004150025.2 (metal-nicotianamine transporter YSL3 isoform X1 [Cucumis sativus]) HSP 1 Score: 642 bits (1656), Expect = 8.17e-227 Identity = 323/323 (100.00%), Postives = 323/323 (100.00%), Query Frame = 0
BLAST of Cucsat.G19237.T18 vs. NCBI nr
Match: KAA0046808.1 (metal-nicotianamine transporter YSL3-like isoform X1 [Cucumis melo var. makuwa] >TYK26940.1 metal-nicotianamine transporter YSL3-like isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 630 bits (1624), Expect = 5.90e-222 Identity = 317/323 (98.14%), Postives = 320/323 (99.07%), Query Frame = 0
BLAST of Cucsat.G19237.T18 vs. NCBI nr
Match: XP_016899827.1 (PREDICTED: metal-nicotianamine transporter YSL3-like isoform X2 [Cucumis melo] >XP_016899828.1 PREDICTED: metal-nicotianamine transporter YSL3-like isoform X2 [Cucumis melo]) HSP 1 Score: 622 bits (1605), Expect = 1.22e-220 Identity = 312/318 (98.11%), Postives = 315/318 (99.06%), Query Frame = 0
BLAST of Cucsat.G19237.T18 vs. ExPASy TrEMBL
Match: A0A0A0LWG3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G329900 PE=4 SV=1) HSP 1 Score: 642 bits (1656), Expect = 6.39e-228 Identity = 323/323 (100.00%), Postives = 323/323 (100.00%), Query Frame = 0
BLAST of Cucsat.G19237.T18 vs. ExPASy TrEMBL
Match: A0A5A7TVA7 (Metal-nicotianamine transporter YSL3-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold876G00230 PE=4 SV=1) HSP 1 Score: 630 bits (1624), Expect = 2.86e-222 Identity = 317/323 (98.14%), Postives = 320/323 (99.07%), Query Frame = 0
BLAST of Cucsat.G19237.T18 vs. ExPASy TrEMBL
Match: A0A1S4DV12 (metal-nicotianamine transporter YSL3-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487454 PE=4 SV=1) HSP 1 Score: 622 bits (1605), Expect = 5.89e-221 Identity = 312/318 (98.11%), Postives = 315/318 (99.06%), Query Frame = 0
BLAST of Cucsat.G19237.T18 vs. ExPASy TrEMBL
Match: A0A1S3BA47 (metal-nicotianamine transporter YSL3-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487454 PE=4 SV=1) HSP 1 Score: 622 bits (1605), Expect = 6.85e-219 Identity = 312/318 (98.11%), Postives = 315/318 (99.06%), Query Frame = 0
BLAST of Cucsat.G19237.T18 vs. ExPASy TrEMBL
Match: A0A1S3C1T1 (metal-nicotianamine transporter YSL3 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103496061 PE=4 SV=1) HSP 1 Score: 607 bits (1566), Expect = 4.66e-215 Identity = 298/320 (93.12%), Postives = 312/320 (97.50%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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