Cucsat.G19237.T17 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GACGAGTGACGAAAGAATTCTGAAAATCCTTCTAACCACAAAAATATATGAATCAAAAAAAACAAAAACAAATTGGACATATCCCCATAAAACTATATCTCACTTTTAAAAAAGAAAAAGGAACCCAAAACAACATCCATTCTTAGTTGAGTTTTTGGAAAACACACCTTTGCTTCAGGTTCCAAATTCCAATCACACTCACAAATCTGCTTCAGCTTAAATTTTAAGCTTTTACTCCTTTTTTTTTTTTTCCTTTCTGTTCTCCATCAACAAGAATCTTACCACAATTTCACGTAATTTAGCATCTTAGAACACTCTTCAACCTATCATCTTTATAAGCACCGTATCCTCCTCTAGTTCATCAACTAAATCGTCCCACCCCCCTTGCCTTGCTGCTCCTACAAATCCGTTGCTGCCCTCGCCCCACCATATTCAAATAGGTTCAGTTAGTTTGATTCATTTGTTTATTTGATTTAGCTGTTTGTCTATTGTTTTGAATGGCGAAAGTTTTGGGATTCTATACCCATGCATGAATTATCAATTAGAGATTTGCTGATTGCTATACAATTGTGTGCAGAAATTATCATTATCGTGGTCATATTTTGGATACCATTGAGCAAAACAAGTAAGTTGGTTTCTCATCTATTGTTGTTGTGTCCTCCTAGATTTTAACGCACTAAATGTACTGAAATACGTACTCTCCTTCAATAATTTTCTTACAATCTAGTTAAGTTAACTAGAGAATTAGTTTTACCGTTCAAGTGAGTTTCAGTTAGTTTAACACTAATGCAATAGTACTAAAAATATAAGTAAATTTGAGGTTAAACATGTTTTTAGTTTCTAAACTTTAATTAAAATAACATAATTTAGTTTTTGAATTTAATTAGTTCATATACTTAAATTTTGTTAGAATTTAGAGTTTAGAAATTTTAGTAATTTAGTCAATGTAATTTAATCTCCAATATTAAAAAAAAAAATGGTCAATTTTTATTATTTTATGATATAGAATTTGTATTTTAAAAAAATATTGAGTCTCTAGCTAATAGTTCATTTGGGGAAGAAATCTAATTAAACCTTAATACTAGTTTCTATTGAAAGGAATTGAATGGTTACAAAATTTAAAGTAGAATGTAGCAACTGTTAGGGTTTAATTGTATCAAAATTAAAAATATATGAACAGAAATCAGAATTGTTATAAAAGTAAAGTCATGGGGGAGTTCTTGTTTAAAGTATTTTTTTAACACTGCTTTTTAAACTTTCATGGGGTTGGTTGTAAAAGGGTCCAATACAGTAGGTGAGGGAGGTTGATTGAGGTTTATTTTACAAATAAATAAGTTTTGAATTAGTTTGAAATCCTAAAATTTGGAATTCTTAGAGAGAGCATCCAAACCATATTTACATATTTGGCTTCTAACAATTTGATGCAGAAAAAGAAAAAAAAATATATATTGGGATTCTGATTACTTTTGTACACTTTTAGTGTCTTCAAAAGATATTTCTTATTTTTTTCACTAAATAAGAAATTCTCTTTCTTTCGTTCTCTCTGTTTCCTGTTATGCAAATATAAAATCATTTTAGTTAAAATATTGTTTTGATGATTTAGTTTTAGTTTTTAAAATAGAAAATTGCATTAAATCACATCAAAAATGTAGAAAAAAACACTTCATGATACTTTTTTTTTTCTACTTTTTTGCAAACTCTTCCTTTATAATTATCTAATTTTATTTGTTTGAATTATAATAGATCTTATATCTAATGCATCAAAGTCAAAATTTAATTAAATAATAGTGATTTCCATGCCATCCAAAAAACATAAACTAAATTGTTTTACATCATAAAACTATTCAAAATACATACAAATATAGCAAAATTTTATAATTTATCCATGATAGACATTTATTAGTATCTATCGACAATAAATAATAGTAATATATCAATATCTATCAACTTATATCAGTAATAACAAAAAAGAAAAAATGTAACTAAGGCATAATAAACAAATTTTGGAAAAAAATTTAGATTTATTAAATATATAGGAGCTAAAATTGAACCAAAATAACGATTTAACGAATATTTTTCAACGAGACTTCAAGTTGTATGATTCCCACGTGATGTTGAATCTATCTTGGATAATGTCAAATCTCTACTTTGCATAACCATTGTATTGGTAGAACCTCTATCGTAAATATAACAAAACTTTAAATCTAATCTTGAAAGTTTATTGGTGATAAACTATATAATAGAAATTTTATATATAGTTTAGTTTATGTATGTTAGTGGATAGATTTTGTTATGTTTTAGTTTCATAAAAGTATGAGTGAATATAATAGGAGGCAGTATTATAGAATCTGACTCGTAAATGTTGCTATAGTTGCATTCTTAAAATTATTATTAGCGTTGAAAATGTTTGTTTATGCAATTGCCTCAATACTTTCTTTGTTTGCATATTCACTTTCTATTTATATATTAGAAAAATAAGTTAAAGACTTTTAAAAACTAAAAATATAAATGTGAAGAACTGTTTTGTTCAATAGACATAATTCAAATGTTTTTGGATGGGGAGATAAAGGAAGAAACAAACATAAATTTCATTGGTTTAGAACTAAAAGAAAATGGTTATTAGCACAAGGGCCAACTTTGTAATTTACTGATATTCATCATCCTTTTCTTGTGGGGGTAACAATCAAACAAACAAATCACAAATCTCCCACTCCTTAAATTTCTTCTCTTTATTCTAAAATCTCATCTAATATTAAACTATTTATATAACTCCAATTTCTGGGTTCTTACGCTTGAAACTACGAATATTGTTTTGATATATAGCTGCTTATTCAAATGAGGAACTCCATCATAGAAGAAGTACACGAAATTGAGACTAATGAAAGTAAAGAAGAAGACAAGACTCAAAATGAAGCAGAGGATGTTAAGAAAATTGCACCTTGGACAAGACAGATTACAATCCGTGGTGTAATTGCAAGCATAGCAATAGGAATTATGTACAGTGTAATAGTGATGAAGCTTAATCTTACAACAGGTTTGGTACCAAATTTGAACGTTTCAGTTGCTCTTATTGCATTTGTGTTTATAAAGACATGGACTCTGTTGCTTGAGAAAGCTGGATTTGTATGCACTCCCTTTACACCACAGGAAAACACCGTCATTCAGACTTGTGCTGTTGCTTGTTATAGCATTGCTGTTGGAGGTGAGATAGCTATTGAAATGCTTTGTCGTTTTTTCTGTTTGAAATGTCTTCAATCTGCTGTCTGACACAGTCCACAAGTAGGAGATCTATGGATGTAGTTAACATACGTATACGATTAATGAACCACATAGTCTCTTTGTTCATCTCTCTACTGATCTTTATGTTTTTTGACAGCTGTGTTTGATGATTTTGTGTAGGTGGCTTTGGATCCTACTTGTTTGCTTTGAGCAGGAAGACGTACGAGCAAGCGGGTGTCAACATGGAAGGAAATGCTCCTGGAAGCACCAAAGAACCAGGAATTGGTTGGATCACTGGCTTCCTCTCTGTTAGTAGTTTTGTGGGACTTCTTGCCTTGGTTCCGCTTAGAAAGGTATATTTCTTTCTCATAGAAGTTATGTGTTTACTAAGTGAATCTAAATTTGTTTGTGTACATGTCACACACTCAATGTTATAAACAAACCGAGAAACAAGATGATTAATACAACAGATATAATAAAGACAAATAAACACATAGATTTGTAACTCCATGTGGTGCAAAGTTACTTACGTTTGGGATAGTGTGCTCAGTAGAAAGGAACTTCGCTAATGAAGTTTCACAATTACAATATAGTACTATAGGTAAAAAAATATTTACAAATGACTCACGAATACTCAACTCTTAGTAAAAACTTACGCTATCCATAAGCTTGAGATTCACTGGCTATTCACTGGCTACGAGAAATGCTCTACAGTTGACAGGAGTTTGAGTTCTCCTCAAACTAACTTACATAGGTTGCTCTTATGTATGAGCTCCTCTCAACTTCTCGCCGACCGAGATAAACAATTCAACTTAGGTAACAAAATGCACTCCAAAAACACACAATATGGCCAACCCTAAAAAGGAAGCAACATCTCAATATAGGTTGCTTAAAGACATTCTGAAGGTAAAAAATCATCTCCACGAAACAAAATGCTTTTAAAAGAAATTTCCAATCATCTTGCAGTAACATGATGGAGTTGAGAACTCTAGTTGGTTTTATTAATGGTGTCTTGAATTGTATTGCAGATCATGATACTAGACTATAAATTGACTTATCCAAGTGGAACTGCAACAGCTGTTCTGATTAATGGTTTCCACACACCGAAAGGAGACAAAGCAGCAAAGTATGCAATCCCTTGCTAGTTCTTCTTCATTTAAAACGAAATCGTGTGTTGAACACTTGATTTGAAAGCAACTCTAAAGAAAATTCTTCTATTCATTTCTTTGCCAGGAAACAAGTTCATGGATTCATGAAATACTTTTCATTCAGTTTTTTCTGGGCTCTATTCCAATGGTTTTATTCTGGAGGAGAAAAATGTGGGTTCTCACAGTTTCCAACATTTGGAATAAAAGCTTGGAAAGATTCGTGGGTGCTCAAAATCTTTCCTATTTTCATCTTCTTTGCCATTCTTGAACTTGGTTGGTTTCTTTCATTAAACTGATAGGCATTTATCTTTTGTAGGTTTTACTTTGATTTCAGCTTGACTTATATCGGAGCAGGGATGATATGCCCCCATCTTGTGAACTTGTCATTGCTTCTTGGTGCTGTTCTTTCTTGGGGCGTTATGTGGCCTTTAATGAAGGAACTTAAAGGGGAATGGTATCCTGGATCTCTTCCAGAGAGCAGTATGAAAAGCCTCAATGGTTACAAGGTATAAAATTGGAAACAGGCCATGAAATTTGTAGGGAATTATGTTTTATTTTATTTTGTTAGGTGTGAAATGTCTTAAATTTATTATCTAACCCTTTAAAAAACAAAGCACTGGTTTTCGTTGCTCCGTTAGCAAGTCAAGGTCTAGGGGCACTGCGCTTTAGTGGGACTCAGAGGCAACACTGTCAAAGCCTAATTGTATTCACACACATATATATAGTGTTCGCGATTTTGGCCATGGTTCAGAAGAGTGCGCTATATAAACTTTTTCACTGTGGTGCCACCTCTTAGATCTTTTTATTATTATTTTTTAAACAAAAATAACACTCTTTTTACGATGAAATGAAATCAGATTCATGTCAGTTTTCTTACACATTGTTTCGTGCAGGTATTTATATCAATTGCTTTGATACTTGGAGATGGGCTTTACCATTTCCTCAAAATTCTATATTTCACTGGTTCAAACATGTACGCAAAAGCAACCAACAAGAAGTTGAAAACATGTAAATTGATGATTCCTGATGTGCCATTCCCAAGTTTTCTTTCATTCATTATGACATGATATTTATATGGATGCAGTCCCTGATGATTCAGTCCCAACTTTCGACGATCATCGACGAAACGAAGTGTTCTTAAGAGACGGTATTCCGGTATGGGTGGCAATCACAGGGTACATCTTCTTCTCCATTGTCTCTATCATTGTAATCCCAATCATGTTCTCAGAGGTCAAATGGTACTACATAGTTGTGGCCTATACTTTGGCACCATCTCTTAGCTTTTGCAATGCCTATGGTGCTGGTCTAACTGACATGAATATGGCTTATAACTATGGGAAAGTGGCTCTGTTTGTGCTTGCTGCTATGGCTGGTAAAAATGATGGTGTAGTTGCTGGACTTGTTGGTTGTGGTTTGATCAAGTCTATTGTTTCCATTTCCTCTGATTTGATGCATGATTTCAAAACTGGCCATCTTACACTTACATCTCCAAGATCCATGCTTTTAAGCCAAGCTATTGGTACAGCCTTAGGCTGCATTGTAGCTCCTATCACATTTTATATGTTCTACAAAGCATTTGATCTCGCCAACCCAAATGGTGAGTACAAGGTCCCGTATGCAATCATATACCGAAACATGGCTATCTTAGGAGTTGAAGGCTTCTCAGCTTTGCCTCAGCATTGCTTGCAGCTATGTTATGGATTCTTTAGCTTTGCCATAGTAGCTAACTTGTTGAGAGATCTTACACTTGAGAAATTTGGGAAATGGATCCCATTGCCAATGGTCATGGCTGTGCCTTTCCTCGTCGGTGCTTATTTTGCAATCGATATGTGCATGGGGAGCTTGATCGTGTTCGTGTGGCATTATCTAAATCGTGAAAAGGCTGGATTGATGGTTCCGGCTGTTGCGTCTGGTTTGATATGTGGAGAAGGATTATGGATTCTCCCTTCTTCAATTCTTGCTTTGGCTAAGATTCATCCCCCAATTTGTATGAGTTTTTTTTCTTCTAGTAAAAGTTAAATCTAGAAAGTGCTCTTAAGTATAGAATCTTATGCATGTTCAAGATGTAGAGAAGCTGCAATCTCTTCATAAATTTTAGAATGCAGCAAGTTTCAATATAGTGTTACTGTATAAGTTAAAGGTTAATAGAATACTTTGAGAGAT ATGGATGCAGTCCCTGATGATTCAGTCCCAACTTTCGACGATCATCGACGAAACGAAGTGTTCTTAAGAGACGGTATTCCGGTATGGGTGGCAATCACAGGGTACATCTTCTTCTCCATTGTCTCTATCATTGTAATCCCAATCATGTTCTCAGAGGTCAAATGGTACTACATAGTTGTGGCCTATACTTTGGCACCATCTCTTAGCTTTTGCAATGCCTATGGTGCTGGTCTAACTGACATGAATATGGCTTATAACTATGGGAAAGTGGCTCTGTTTGTGCTTGCTGCTATGGCTGGTAAAAATGATGGTGTAGTTGCTGGACTTGTTGGTTGTGGTTTGATCAAGTCTATTGTTTCCATTTCCTCTGATTTGATGCATGATTTCAAAACTGGCCATCTTACACTTACATCTCCAAGATCCATGCTTTTAAGCCAAGCTATTGGTACAGCCTTAGGCTGCATTGTAGCTCCTATCACATTTTATATGTTCTACAAAGCATTTGATCTCGCCAACCCAAATGGTGAGTACAAGGTCCCGTATGCAATCATATACCGAAACATGGCTATCTTAGGAGTTGAAGGCTTCTCAGCTTTGCCTCAGCATTGCTTGCAGCTATGTTATGGATTCTTTAGCTTTGCCATAGTAGCTAACTTGTTGAGAGATCTTACACTTGAGAAATTTGGGAAATGGATCCCATTGCCAATGGTCATGGCTGTGCCTTTCCTCGTCGGTGCTTATTTTGCAATCGATATGTGCATGGGGAGCTTGATCGTGTTCGTGTGGCATTATCTAAATCGTGAAAAGGCTGGATTGATGGTTCCGGCTGTTGCGTCTGGTTTGATATGTGGAGAAGGATTATGGATTCTCCCTTCTTCAATTCTTGCTTTGGCTAAGATTCATCCCCCAATTTGTATGAGTTTTTTTTCTTCTAGTAAAAGTTAA MDAVPDDSVPTFDDHRRNEVFLRDGIPVWVAITGYIFFSIVSIIVIPIMFSEVKWYYIVVAYTLAPSLSFCNAYGAGLTDMNMAYNYGKVALFVLAAMAGKNDGVVAGLVGCGLIKSIVSISSDLMHDFKTGHLTLTSPRSMLLSQAIGTALGCIVAPITFYMFYKAFDLANPNGEYKVPYAIIYRNMAILGVEGFSALPQHCLQLCYGFFSFAIVANLLRDLTLEKFGKWIPLPMVMAVPFLVGAYFAIDMCMGSLIVFVWHYLNREKAGLMVPAVASGLICGEGLWILPSSILALAKIHPPICMSFFSSSKS Homology
BLAST of Cucsat.G19237.T17 vs. ExPASy Swiss-Prot
Match: Q2EF88 (Metal-nicotianamine transporter YSL3 OS=Arabidopsis thaliana OX=3702 GN=YSL3 PE=2 SV=1) HSP 1 Score: 488.8 bits (1257), Expect = 4.6e-137 Identity = 236/301 (78.41%), Postives = 266/301 (88.37%), Query Frame = 0
BLAST of Cucsat.G19237.T17 vs. ExPASy Swiss-Prot
Match: Q6R3K9 (Metal-nicotianamine transporter YSL2 OS=Arabidopsis thaliana OX=3702 GN=YSL2 PE=1 SV=1) HSP 1 Score: 483.4 bits (1243), Expect = 1.9e-135 Identity = 229/306 (74.84%), Postives = 274/306 (89.54%), Query Frame = 0
BLAST of Cucsat.G19237.T17 vs. ExPASy Swiss-Prot
Match: Q7XUJ2 (Probable metal-nicotianamine transporter YSL9 OS=Oryza sativa subsp. japonica OX=39947 GN=YSL9 PE=2 SV=2) HSP 1 Score: 470.7 bits (1210), Expect = 1.3e-131 Identity = 215/311 (69.13%), Postives = 267/311 (85.85%), Query Frame = 0
BLAST of Cucsat.G19237.T17 vs. ExPASy Swiss-Prot
Match: Q7XN54 (Probable metal-nicotianamine transporter YSL16 OS=Oryza sativa subsp. japonica OX=39947 GN=YSL16 PE=2 SV=2) HSP 1 Score: 456.8 bits (1174), Expect = 1.9e-127 Identity = 207/305 (67.87%), Postives = 258/305 (84.59%), Query Frame = 0
BLAST of Cucsat.G19237.T17 vs. ExPASy Swiss-Prot
Match: Q6R3L0 (Metal-nicotianamine transporter YSL1 OS=Arabidopsis thaliana OX=3702 GN=YSL1 PE=2 SV=2) HSP 1 Score: 439.9 bits (1130), Expect = 2.4e-122 Identity = 201/298 (67.45%), Postives = 254/298 (85.23%), Query Frame = 0
BLAST of Cucsat.G19237.T17 vs. NCBI nr
Match: XP_031736196.1 (metal-nicotianamine transporter YSL3 isoform X3 [Cucumis sativus]) HSP 1 Score: 618 bits (1594), Expect = 1.04e-219 Identity = 310/314 (98.73%), Postives = 311/314 (99.04%), Query Frame = 0
BLAST of Cucsat.G19237.T17 vs. NCBI nr
Match: XP_031736195.1 (metal-nicotianamine transporter YSL3 isoform X2 [Cucumis sativus] >KAE8653095.1 hypothetical protein Csa_019934 [Cucumis sativus]) HSP 1 Score: 618 bits (1594), Expect = 5.88e-218 Identity = 310/314 (98.73%), Postives = 311/314 (99.04%), Query Frame = 0
BLAST of Cucsat.G19237.T17 vs. NCBI nr
Match: XP_004150025.2 (metal-nicotianamine transporter YSL3 isoform X1 [Cucumis sativus]) HSP 1 Score: 618 bits (1594), Expect = 1.47e-217 Identity = 310/314 (98.73%), Postives = 311/314 (99.04%), Query Frame = 0
BLAST of Cucsat.G19237.T17 vs. NCBI nr
Match: KAA0046808.1 (metal-nicotianamine transporter YSL3-like isoform X1 [Cucumis melo var. makuwa] >TYK26940.1 metal-nicotianamine transporter YSL3-like isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 606 bits (1562), Expect = 1.06e-212 Identity = 304/314 (96.82%), Postives = 308/314 (98.09%), Query Frame = 0
BLAST of Cucsat.G19237.T17 vs. NCBI nr
Match: XP_016899827.1 (PREDICTED: metal-nicotianamine transporter YSL3-like isoform X2 [Cucumis melo] >XP_016899828.1 PREDICTED: metal-nicotianamine transporter YSL3-like isoform X2 [Cucumis melo]) HSP 1 Score: 598 bits (1543), Expect = 2.25e-211 Identity = 299/309 (96.76%), Postives = 303/309 (98.06%), Query Frame = 0
BLAST of Cucsat.G19237.T17 vs. ExPASy TrEMBL
Match: A0A0A0LWG3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G329900 PE=4 SV=1) HSP 1 Score: 618 bits (1594), Expect = 1.17e-218 Identity = 310/314 (98.73%), Postives = 311/314 (99.04%), Query Frame = 0
BLAST of Cucsat.G19237.T17 vs. ExPASy TrEMBL
Match: A0A5A7TVA7 (Metal-nicotianamine transporter YSL3-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold876G00230 PE=4 SV=1) HSP 1 Score: 606 bits (1562), Expect = 5.11e-213 Identity = 304/314 (96.82%), Postives = 308/314 (98.09%), Query Frame = 0
BLAST of Cucsat.G19237.T17 vs. ExPASy TrEMBL
Match: A0A1S4DV12 (metal-nicotianamine transporter YSL3-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487454 PE=4 SV=1) HSP 1 Score: 598 bits (1543), Expect = 1.09e-211 Identity = 299/309 (96.76%), Postives = 303/309 (98.06%), Query Frame = 0
BLAST of Cucsat.G19237.T17 vs. ExPASy TrEMBL
Match: A0A1S3BA47 (metal-nicotianamine transporter YSL3-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487454 PE=4 SV=1) HSP 1 Score: 598 bits (1543), Expect = 1.21e-209 Identity = 299/309 (96.76%), Postives = 303/309 (98.06%), Query Frame = 0
BLAST of Cucsat.G19237.T17 vs. ExPASy TrEMBL
Match: A0A1S3C1T1 (metal-nicotianamine transporter YSL3 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103496061 PE=4 SV=1) HSP 1 Score: 583 bits (1504), Expect = 8.58e-206 Identity = 285/311 (91.64%), Postives = 300/311 (96.46%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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